data_3SX4 # _entry.id 3SX4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SX4 pdb_00003sx4 10.2210/pdb3sx4/pdb RCSB RCSB066761 ? ? WWPDB D_1000066761 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BJM ;Crystal structure of human dpp-iv in complex with (1s,3s, 5s)-2-[(2s)-2-amino-2-(3-hydroxytricyclo[3.3.1.13,7]dec-1- yl)acetyl]-2-azabicyclo[3.1.0]hexane-3-carbonitrile (cas), (1s,3s,5s)-2-((2s)-2-amino-2-(3-hydroxyadamantan-1- yl)acetyl)-2-azabicyclo[3.1.0]hexane-3-carbonitrile (iupac), or bms-477118 ; unspecified PDB 3NOX ;Crystal structure of human DPP-IV in complex with Sa-(+)-(6-(aminomethyl)-5-(2,4-dichlorophenyl)-7-methylimidazo[1,2-a]pyrimidin-2-yl)(morpholino)methanone ; unspecified PDB 3SWW . unspecified PDB 3Q0T . unspecified # _pdbx_database_status.entry_id 3SX4 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-07-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Klei, H.E.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;7-Oxopyrrolopyridine-derived DPP4 inhibitors-mitigation of CYP and hERG liabilities via introduction of polar functionalities in the active site. ; _citation.journal_abbrev Bioorg.Med.Chem.Lett. _citation.journal_volume 21 _citation.page_first 6646 _citation.page_last 6651 _citation.year 2011 _citation.journal_id_ASTM BMCLE8 _citation.country UK _citation.journal_id_ISSN 0960-894X _citation.journal_id_CSD 1127 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21996520 _citation.pdbx_database_id_DOI 10.1016/j.bmcl.2011.09.074 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, W.' 1 ? primary 'Devasthale, P.' 2 ? primary 'Wang, A.' 3 ? primary 'Harrity, T.' 4 ? primary 'Egan, D.' 5 ? primary 'Morgan, N.' 6 ? primary 'Cap, M.' 7 ? primary 'Fura, A.' 8 ? primary 'Klei, H.E.' 9 ? primary 'Kish, K.' 10 ? primary 'Weigelt, C.' 11 ? primary 'Sun, L.' 12 ? primary 'Levesque, P.' 13 ? primary 'Li, Y.X.' 14 ? primary 'Zahler, R.' 15 ? primary 'Kirby, M.S.' 16 ? primary 'Hamann, L.G.' 17 ? # _cell.entry_id 3SX4 _cell.length_a 65.905 _cell.length_b 67.854 _cell.length_c 422.095 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3SX4 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dipeptidyl peptidase 4' 87450.844 2 3.4.14.5 ? 'unp residues 39-766' ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 11 ? ? ? ? 4 non-polymer syn '3-(aminomethyl)-4-(2,4-dichlorophenyl)-6-(2-methoxyphenyl)-2-methyl-5,6-dihydro-7H-pyrrolo[3,4-b]pyridin-7-one' 428.311 2 ? ? ? ? 5 water nat water 18.015 23 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;ADABP, Adenosine deaminase complexing protein 2, ADCP-2, Dipeptidyl peptidase IV, DPP IV, T-cell activation antigen CD26, TP103, Dipeptidyl peptidase 4 membrane form, Dipeptidyl peptidase IV membrane form, Dipeptidyl peptidase 4 soluble form, Dipeptidyl peptidase IV soluble form ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EFSRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILL EYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYN GITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL SSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDF IILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINR RLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTP EDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS HFIKQCFSLPPLEQKLISEEDLNSAVDHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;EFSRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILL EYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYN GITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL SSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL SDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDF IILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINR RLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTP EDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS HFIKQCFSLPPLEQKLISEEDLNSAVDHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 SER n 1 4 ARG n 1 5 LYS n 1 6 THR n 1 7 TYR n 1 8 THR n 1 9 LEU n 1 10 THR n 1 11 ASP n 1 12 TYR n 1 13 LEU n 1 14 LYS n 1 15 ASN n 1 16 THR n 1 17 TYR n 1 18 ARG n 1 19 LEU n 1 20 LYS n 1 21 LEU n 1 22 TYR n 1 23 SER n 1 24 LEU n 1 25 ARG n 1 26 TRP n 1 27 ILE n 1 28 SER n 1 29 ASP n 1 30 HIS n 1 31 GLU n 1 32 TYR n 1 33 LEU n 1 34 TYR n 1 35 LYS n 1 36 GLN n 1 37 GLU n 1 38 ASN n 1 39 ASN n 1 40 ILE n 1 41 LEU n 1 42 VAL n 1 43 PHE n 1 44 ASN n 1 45 ALA n 1 46 GLU n 1 47 TYR n 1 48 GLY n 1 49 ASN n 1 50 SER n 1 51 SER n 1 52 VAL n 1 53 PHE n 1 54 LEU n 1 55 GLU n 1 56 ASN n 1 57 SER n 1 58 THR n 1 59 PHE n 1 60 ASP n 1 61 GLU n 1 62 PHE n 1 63 GLY n 1 64 HIS n 1 65 SER n 1 66 ILE n 1 67 ASN n 1 68 ASP n 1 69 TYR n 1 70 SER n 1 71 ILE n 1 72 SER n 1 73 PRO n 1 74 ASP n 1 75 GLY n 1 76 GLN n 1 77 PHE n 1 78 ILE n 1 79 LEU n 1 80 LEU n 1 81 GLU n 1 82 TYR n 1 83 ASN n 1 84 TYR n 1 85 VAL n 1 86 LYS n 1 87 GLN n 1 88 TRP n 1 89 ARG n 1 90 HIS n 1 91 SER n 1 92 TYR n 1 93 THR n 1 94 ALA n 1 95 SER n 1 96 TYR n 1 97 ASP n 1 98 ILE n 1 99 TYR n 1 100 ASP n 1 101 LEU n 1 102 ASN n 1 103 LYS n 1 104 ARG n 1 105 GLN n 1 106 LEU n 1 107 ILE n 1 108 THR n 1 109 GLU n 1 110 GLU n 1 111 ARG n 1 112 ILE n 1 113 PRO n 1 114 ASN n 1 115 ASN n 1 116 THR n 1 117 GLN n 1 118 TRP n 1 119 VAL n 1 120 THR n 1 121 TRP n 1 122 SER n 1 123 PRO n 1 124 VAL n 1 125 GLY n 1 126 HIS n 1 127 LYS n 1 128 LEU n 1 129 ALA n 1 130 TYR n 1 131 VAL n 1 132 TRP n 1 133 ASN n 1 134 ASN n 1 135 ASP n 1 136 ILE n 1 137 TYR n 1 138 VAL n 1 139 LYS n 1 140 ILE n 1 141 GLU n 1 142 PRO n 1 143 ASN n 1 144 LEU n 1 145 PRO n 1 146 SER n 1 147 TYR n 1 148 ARG n 1 149 ILE n 1 150 THR n 1 151 TRP n 1 152 THR n 1 153 GLY n 1 154 LYS n 1 155 GLU n 1 156 ASP n 1 157 ILE n 1 158 ILE n 1 159 TYR n 1 160 ASN n 1 161 GLY n 1 162 ILE n 1 163 THR n 1 164 ASP n 1 165 TRP n 1 166 VAL n 1 167 TYR n 1 168 GLU n 1 169 GLU n 1 170 GLU n 1 171 VAL n 1 172 PHE n 1 173 SER n 1 174 ALA n 1 175 TYR n 1 176 SER n 1 177 ALA n 1 178 LEU n 1 179 TRP n 1 180 TRP n 1 181 SER n 1 182 PRO n 1 183 ASN n 1 184 GLY n 1 185 THR n 1 186 PHE n 1 187 LEU n 1 188 ALA n 1 189 TYR n 1 190 ALA n 1 191 GLN n 1 192 PHE n 1 193 ASN n 1 194 ASP n 1 195 THR n 1 196 GLU n 1 197 VAL n 1 198 PRO n 1 199 LEU n 1 200 ILE n 1 201 GLU n 1 202 TYR n 1 203 SER n 1 204 PHE n 1 205 TYR n 1 206 SER n 1 207 ASP n 1 208 GLU n 1 209 SER n 1 210 LEU n 1 211 GLN n 1 212 TYR n 1 213 PRO n 1 214 LYS n 1 215 THR n 1 216 VAL n 1 217 ARG n 1 218 VAL n 1 219 PRO n 1 220 TYR n 1 221 PRO n 1 222 LYS n 1 223 ALA n 1 224 GLY n 1 225 ALA n 1 226 VAL n 1 227 ASN n 1 228 PRO n 1 229 THR n 1 230 VAL n 1 231 LYS n 1 232 PHE n 1 233 PHE n 1 234 VAL n 1 235 VAL n 1 236 ASN n 1 237 THR n 1 238 ASP n 1 239 SER n 1 240 LEU n 1 241 SER n 1 242 SER n 1 243 VAL n 1 244 THR n 1 245 ASN n 1 246 ALA n 1 247 THR n 1 248 SER n 1 249 ILE n 1 250 GLN n 1 251 ILE n 1 252 THR n 1 253 ALA n 1 254 PRO n 1 255 ALA n 1 256 SER n 1 257 MET n 1 258 LEU n 1 259 ILE n 1 260 GLY n 1 261 ASP n 1 262 HIS n 1 263 TYR n 1 264 LEU n 1 265 CYS n 1 266 ASP n 1 267 VAL n 1 268 THR n 1 269 TRP n 1 270 ALA n 1 271 THR n 1 272 GLN n 1 273 GLU n 1 274 ARG n 1 275 ILE n 1 276 SER n 1 277 LEU n 1 278 GLN n 1 279 TRP n 1 280 LEU n 1 281 ARG n 1 282 ARG n 1 283 ILE n 1 284 GLN n 1 285 ASN n 1 286 TYR n 1 287 SER n 1 288 VAL n 1 289 MET n 1 290 ASP n 1 291 ILE n 1 292 CYS n 1 293 ASP n 1 294 TYR n 1 295 ASP n 1 296 GLU n 1 297 SER n 1 298 SER n 1 299 GLY n 1 300 ARG n 1 301 TRP n 1 302 ASN n 1 303 CYS n 1 304 LEU n 1 305 VAL n 1 306 ALA n 1 307 ARG n 1 308 GLN n 1 309 HIS n 1 310 ILE n 1 311 GLU n 1 312 MET n 1 313 SER n 1 314 THR n 1 315 THR n 1 316 GLY n 1 317 TRP n 1 318 VAL n 1 319 GLY n 1 320 ARG n 1 321 PHE n 1 322 ARG n 1 323 PRO n 1 324 SER n 1 325 GLU n 1 326 PRO n 1 327 HIS n 1 328 PHE n 1 329 THR n 1 330 LEU n 1 331 ASP n 1 332 GLY n 1 333 ASN n 1 334 SER n 1 335 PHE n 1 336 TYR n 1 337 LYS n 1 338 ILE n 1 339 ILE n 1 340 SER n 1 341 ASN n 1 342 GLU n 1 343 GLU n 1 344 GLY n 1 345 TYR n 1 346 ARG n 1 347 HIS n 1 348 ILE n 1 349 CYS n 1 350 TYR n 1 351 PHE n 1 352 GLN n 1 353 ILE n 1 354 ASP n 1 355 LYS n 1 356 LYS n 1 357 ASP n 1 358 CYS n 1 359 THR n 1 360 PHE n 1 361 ILE n 1 362 THR n 1 363 LYS n 1 364 GLY n 1 365 THR n 1 366 TRP n 1 367 GLU n 1 368 VAL n 1 369 ILE n 1 370 GLY n 1 371 ILE n 1 372 GLU n 1 373 ALA n 1 374 LEU n 1 375 THR n 1 376 SER n 1 377 ASP n 1 378 TYR n 1 379 LEU n 1 380 TYR n 1 381 TYR n 1 382 ILE n 1 383 SER n 1 384 ASN n 1 385 GLU n 1 386 TYR n 1 387 LYS n 1 388 GLY n 1 389 MET n 1 390 PRO n 1 391 GLY n 1 392 GLY n 1 393 ARG n 1 394 ASN n 1 395 LEU n 1 396 TYR n 1 397 LYS n 1 398 ILE n 1 399 GLN n 1 400 LEU n 1 401 SER n 1 402 ASP n 1 403 TYR n 1 404 THR n 1 405 LYS n 1 406 VAL n 1 407 THR n 1 408 CYS n 1 409 LEU n 1 410 SER n 1 411 CYS n 1 412 GLU n 1 413 LEU n 1 414 ASN n 1 415 PRO n 1 416 GLU n 1 417 ARG n 1 418 CYS n 1 419 GLN n 1 420 TYR n 1 421 TYR n 1 422 SER n 1 423 VAL n 1 424 SER n 1 425 PHE n 1 426 SER n 1 427 LYS n 1 428 GLU n 1 429 ALA n 1 430 LYS n 1 431 TYR n 1 432 TYR n 1 433 GLN n 1 434 LEU n 1 435 ARG n 1 436 CYS n 1 437 SER n 1 438 GLY n 1 439 PRO n 1 440 GLY n 1 441 LEU n 1 442 PRO n 1 443 LEU n 1 444 TYR n 1 445 THR n 1 446 LEU n 1 447 HIS n 1 448 SER n 1 449 SER n 1 450 VAL n 1 451 ASN n 1 452 ASP n 1 453 LYS n 1 454 GLY n 1 455 LEU n 1 456 ARG n 1 457 VAL n 1 458 LEU n 1 459 GLU n 1 460 ASP n 1 461 ASN n 1 462 SER n 1 463 ALA n 1 464 LEU n 1 465 ASP n 1 466 LYS n 1 467 MET n 1 468 LEU n 1 469 GLN n 1 470 ASN n 1 471 VAL n 1 472 GLN n 1 473 MET n 1 474 PRO n 1 475 SER n 1 476 LYS n 1 477 LYS n 1 478 LEU n 1 479 ASP n 1 480 PHE n 1 481 ILE n 1 482 ILE n 1 483 LEU n 1 484 ASN n 1 485 GLU n 1 486 THR n 1 487 LYS n 1 488 PHE n 1 489 TRP n 1 490 TYR n 1 491 GLN n 1 492 MET n 1 493 ILE n 1 494 LEU n 1 495 PRO n 1 496 PRO n 1 497 HIS n 1 498 PHE n 1 499 ASP n 1 500 LYS n 1 501 SER n 1 502 LYS n 1 503 LYS n 1 504 TYR n 1 505 PRO n 1 506 LEU n 1 507 LEU n 1 508 LEU n 1 509 ASP n 1 510 VAL n 1 511 TYR n 1 512 ALA n 1 513 GLY n 1 514 PRO n 1 515 CYS n 1 516 SER n 1 517 GLN n 1 518 LYS n 1 519 ALA n 1 520 ASP n 1 521 THR n 1 522 VAL n 1 523 PHE n 1 524 ARG n 1 525 LEU n 1 526 ASN n 1 527 TRP n 1 528 ALA n 1 529 THR n 1 530 TYR n 1 531 LEU n 1 532 ALA n 1 533 SER n 1 534 THR n 1 535 GLU n 1 536 ASN n 1 537 ILE n 1 538 ILE n 1 539 VAL n 1 540 ALA n 1 541 SER n 1 542 PHE n 1 543 ASP n 1 544 GLY n 1 545 ARG n 1 546 GLY n 1 547 SER n 1 548 GLY n 1 549 TYR n 1 550 GLN n 1 551 GLY n 1 552 ASP n 1 553 LYS n 1 554 ILE n 1 555 MET n 1 556 HIS n 1 557 ALA n 1 558 ILE n 1 559 ASN n 1 560 ARG n 1 561 ARG n 1 562 LEU n 1 563 GLY n 1 564 THR n 1 565 PHE n 1 566 GLU n 1 567 VAL n 1 568 GLU n 1 569 ASP n 1 570 GLN n 1 571 ILE n 1 572 GLU n 1 573 ALA n 1 574 ALA n 1 575 ARG n 1 576 GLN n 1 577 PHE n 1 578 SER n 1 579 LYS n 1 580 MET n 1 581 GLY n 1 582 PHE n 1 583 VAL n 1 584 ASP n 1 585 ASN n 1 586 LYS n 1 587 ARG n 1 588 ILE n 1 589 ALA n 1 590 ILE n 1 591 TRP n 1 592 GLY n 1 593 TRP n 1 594 SER n 1 595 TYR n 1 596 GLY n 1 597 GLY n 1 598 TYR n 1 599 VAL n 1 600 THR n 1 601 SER n 1 602 MET n 1 603 VAL n 1 604 LEU n 1 605 GLY n 1 606 SER n 1 607 GLY n 1 608 SER n 1 609 GLY n 1 610 VAL n 1 611 PHE n 1 612 LYS n 1 613 CYS n 1 614 GLY n 1 615 ILE n 1 616 ALA n 1 617 VAL n 1 618 ALA n 1 619 PRO n 1 620 VAL n 1 621 SER n 1 622 ARG n 1 623 TRP n 1 624 GLU n 1 625 TYR n 1 626 TYR n 1 627 ASP n 1 628 SER n 1 629 VAL n 1 630 TYR n 1 631 THR n 1 632 GLU n 1 633 ARG n 1 634 TYR n 1 635 MET n 1 636 GLY n 1 637 LEU n 1 638 PRO n 1 639 THR n 1 640 PRO n 1 641 GLU n 1 642 ASP n 1 643 ASN n 1 644 LEU n 1 645 ASP n 1 646 HIS n 1 647 TYR n 1 648 ARG n 1 649 ASN n 1 650 SER n 1 651 THR n 1 652 VAL n 1 653 MET n 1 654 SER n 1 655 ARG n 1 656 ALA n 1 657 GLU n 1 658 ASN n 1 659 PHE n 1 660 LYS n 1 661 GLN n 1 662 VAL n 1 663 GLU n 1 664 TYR n 1 665 LEU n 1 666 LEU n 1 667 ILE n 1 668 HIS n 1 669 GLY n 1 670 THR n 1 671 ALA n 1 672 ASP n 1 673 ASP n 1 674 ASN n 1 675 VAL n 1 676 HIS n 1 677 PHE n 1 678 GLN n 1 679 GLN n 1 680 SER n 1 681 ALA n 1 682 GLN n 1 683 ILE n 1 684 SER n 1 685 LYS n 1 686 ALA n 1 687 LEU n 1 688 VAL n 1 689 ASP n 1 690 VAL n 1 691 GLY n 1 692 VAL n 1 693 ASP n 1 694 PHE n 1 695 GLN n 1 696 ALA n 1 697 MET n 1 698 TRP n 1 699 TYR n 1 700 THR n 1 701 ASP n 1 702 GLU n 1 703 ASP n 1 704 HIS n 1 705 GLY n 1 706 ILE n 1 707 ALA n 1 708 SER n 1 709 SER n 1 710 THR n 1 711 ALA n 1 712 HIS n 1 713 GLN n 1 714 HIS n 1 715 ILE n 1 716 TYR n 1 717 THR n 1 718 HIS n 1 719 MET n 1 720 SER n 1 721 HIS n 1 722 PHE n 1 723 ILE n 1 724 LYS n 1 725 GLN n 1 726 CYS n 1 727 PHE n 1 728 SER n 1 729 LEU n 1 730 PRO n 1 731 PRO n 1 732 LEU n 1 733 GLU n 1 734 GLN n 1 735 LYS n 1 736 LEU n 1 737 ILE n 1 738 SER n 1 739 GLU n 1 740 GLU n 1 741 ASP n 1 742 LEU n 1 743 ASN n 1 744 SER n 1 745 ALA n 1 746 VAL n 1 747 ASP n 1 748 HIS n 1 749 HIS n 1 750 HIS n 1 751 HIS n 1 752 HIS n 1 753 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DPP4, ADCP2, CD26' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pPICZalpha _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DPP4_HUMAN _struct_ref.pdbx_db_accession P27487 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY NYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGI TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS VTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFR PSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSD YTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFII LNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRL GTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPED NLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHF IKQCFSLP ; _struct_ref.pdbx_align_begin 39 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3SX4 A 3 ? 730 ? P27487 39 ? 766 ? 39 766 2 1 3SX4 B 3 ? 730 ? P27487 39 ? 766 ? 39 766 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3SX4 GLU A 1 ? UNP P27487 ? ? 'expression tag' 37 1 1 3SX4 PHE A 2 ? UNP P27487 ? ? 'expression tag' 38 2 1 3SX4 PRO A 731 ? UNP P27487 ? ? 'expression tag' 767 3 1 3SX4 LEU A 732 ? UNP P27487 ? ? 'expression tag' 768 4 1 3SX4 GLU A 733 ? UNP P27487 ? ? 'expression tag' 769 5 1 3SX4 GLN A 734 ? UNP P27487 ? ? 'expression tag' 770 6 1 3SX4 LYS A 735 ? UNP P27487 ? ? 'expression tag' 771 7 1 3SX4 LEU A 736 ? UNP P27487 ? ? 'expression tag' 772 8 1 3SX4 ILE A 737 ? UNP P27487 ? ? 'expression tag' 773 9 1 3SX4 SER A 738 ? UNP P27487 ? ? 'expression tag' 774 10 1 3SX4 GLU A 739 ? UNP P27487 ? ? 'expression tag' 775 11 1 3SX4 GLU A 740 ? UNP P27487 ? ? 'expression tag' 776 12 1 3SX4 ASP A 741 ? UNP P27487 ? ? 'expression tag' 777 13 1 3SX4 LEU A 742 ? UNP P27487 ? ? 'expression tag' 778 14 1 3SX4 ASN A 743 ? UNP P27487 ? ? 'expression tag' 779 15 1 3SX4 SER A 744 ? UNP P27487 ? ? 'expression tag' 780 16 1 3SX4 ALA A 745 ? UNP P27487 ? ? 'expression tag' 781 17 1 3SX4 VAL A 746 ? UNP P27487 ? ? 'expression tag' 782 18 1 3SX4 ASP A 747 ? UNP P27487 ? ? 'expression tag' 783 19 1 3SX4 HIS A 748 ? UNP P27487 ? ? 'expression tag' 784 20 1 3SX4 HIS A 749 ? UNP P27487 ? ? 'expression tag' 785 21 1 3SX4 HIS A 750 ? UNP P27487 ? ? 'expression tag' 786 22 1 3SX4 HIS A 751 ? UNP P27487 ? ? 'expression tag' 787 23 1 3SX4 HIS A 752 ? UNP P27487 ? ? 'expression tag' 788 24 1 3SX4 HIS A 753 ? UNP P27487 ? ? 'expression tag' 789 25 2 3SX4 GLU B 1 ? UNP P27487 ? ? 'expression tag' 37 26 2 3SX4 PHE B 2 ? UNP P27487 ? ? 'expression tag' 38 27 2 3SX4 PRO B 731 ? UNP P27487 ? ? 'expression tag' 767 28 2 3SX4 LEU B 732 ? UNP P27487 ? ? 'expression tag' 768 29 2 3SX4 GLU B 733 ? UNP P27487 ? ? 'expression tag' 769 30 2 3SX4 GLN B 734 ? UNP P27487 ? ? 'expression tag' 770 31 2 3SX4 LYS B 735 ? UNP P27487 ? ? 'expression tag' 771 32 2 3SX4 LEU B 736 ? UNP P27487 ? ? 'expression tag' 772 33 2 3SX4 ILE B 737 ? UNP P27487 ? ? 'expression tag' 773 34 2 3SX4 SER B 738 ? UNP P27487 ? ? 'expression tag' 774 35 2 3SX4 GLU B 739 ? UNP P27487 ? ? 'expression tag' 775 36 2 3SX4 GLU B 740 ? UNP P27487 ? ? 'expression tag' 776 37 2 3SX4 ASP B 741 ? UNP P27487 ? ? 'expression tag' 777 38 2 3SX4 LEU B 742 ? UNP P27487 ? ? 'expression tag' 778 39 2 3SX4 ASN B 743 ? UNP P27487 ? ? 'expression tag' 779 40 2 3SX4 SER B 744 ? UNP P27487 ? ? 'expression tag' 780 41 2 3SX4 ALA B 745 ? UNP P27487 ? ? 'expression tag' 781 42 2 3SX4 VAL B 746 ? UNP P27487 ? ? 'expression tag' 782 43 2 3SX4 ASP B 747 ? UNP P27487 ? ? 'expression tag' 783 44 2 3SX4 HIS B 748 ? UNP P27487 ? ? 'expression tag' 784 45 2 3SX4 HIS B 749 ? UNP P27487 ? ? 'expression tag' 785 46 2 3SX4 HIS B 750 ? UNP P27487 ? ? 'expression tag' 786 47 2 3SX4 HIS B 751 ? UNP P27487 ? ? 'expression tag' 787 48 2 3SX4 HIS B 752 ? UNP P27487 ? ? 'expression tag' 788 49 2 3SX4 HIS B 753 ? UNP P27487 ? ? 'expression tag' 789 50 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KXA non-polymer . '3-(aminomethyl)-4-(2,4-dichlorophenyl)-6-(2-methoxyphenyl)-2-methyl-5,6-dihydro-7H-pyrrolo[3,4-b]pyridin-7-one' ? 'C22 H19 Cl2 N3 O2' 428.311 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3SX4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details ;CRYSTALS GROWN IN 2 UL EQUIVOLUME MIXTURE OF PROTEIN SOLUTION (0.1 M NACL, 20 MM TRIS-HCL BUFFER PH 7.8, 9.8 MG/ML PROTEIN) AND CRYSTALLIZATION SOLUTION (17% W/V PEG 3350, 15% W/V GLYCEROL, 200 MM MGCL2, 100 MM TRIS-HCL BUFFER PH 8.5). SUFFICIENT 100 MM LIGAND STOCK SOLUTION (NEAT DMSO) ADDED TO ACHIEVE 1 MM LIGAND CONCENTRATION. SOAKED OVERNIGHT. HARVESTED DIRECTLY AND CRYO-STORED IN LN2. 2. For crystal 2: