data_4MNB # _entry.id 4MNB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4MNB pdb_00004mnb 10.2210/pdb4mnb/pdb NDB NA2705 ? ? RCSB RCSB082125 ? ? WWPDB D_1000082125 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-11 2 'Structure model' 1 1 2017-02-22 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.value' 15 3 'Structure model' '_struct_conn.pdbx_dist_value' 16 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MNB _pdbx_database_status.recvd_initial_deposition_date 2013-09-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Canals, A.' 1 'Arribas-Bosacoma, R.' 2 'Alvarez, M.' 3 'Albericio, F.' 4 'Aymami, J.' 5 'Coll, M.' 6 # _citation.id primary _citation.title 'Intercalative DNA binding of the marine anticancer drug variolin B.' _citation.journal_abbrev 'Sci Rep' _citation.journal_volume 7 _citation.page_first 39680 _citation.page_last 39680 _citation.year 2017 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2045-2322 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 28051169 _citation.pdbx_database_id_DOI 10.1038/srep39680 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Canals, A.' 1 ? primary 'Arribas-Bosacoma, R.' 2 ? primary 'Albericio, F.' 3 ? primary 'Alvarez, M.' 4 ? primary 'Aymami, J.' 5 ? primary 'Coll, M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*TP*AP*CP*G)-3'" 1809.217 2 ? ? ? ? 2 non-polymer syn "9-amino-5-(2-aminopyrimidin-4-yl)pyrido[3',2':4,5]pyrrolo[1,2-c]pyrimidin-4-ol" 293.283 2 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 3 ? ? ? ? 4 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 25 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTACG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "9-amino-5-(2-aminopyrimidin-4-yl)pyrido[3',2':4,5]pyrrolo[1,2-c]pyrimidin-4-ol" VAR 3 'COBALT HEXAMMINE(III)' NCO 4 'COBALT (II) ION' CO 5 'SODIUM ION' NA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DC n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 VAR non-polymer . "9-amino-5-(2-aminopyrimidin-4-yl)pyrido[3',2':4,5]pyrrolo[1,2-c]pyrimidin-4-ol" ? 'C14 H11 N7 O' 293.283 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 ? ? ? A . n A 1 2 DG 2 2 2 DG GD A . n A 1 3 DT 3 3 3 DT TD A . n A 1 4 DA 4 4 4 DA AD A . n A 1 5 DC 5 5 5 DC CD A . n A 1 6 DG 6 6 6 DG GD A . n B 1 1 DC 1 7 7 DC CD B . n B 1 2 DG 2 8 8 DG GD B . n B 1 3 DT 3 9 9 DT TD B . n B 1 4 DA 4 10 10 DA AD B . n B 1 5 DC 5 11 11 DC CD B . n B 1 6 DG 6 12 12 DG GD B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VAR 1 101 1 VAR VAR A . D 2 VAR 1 102 1 VAR VAR A . E 3 NCO 1 103 1 NCO NCO A . F 4 CO 1 104 1 CO CO A . G 3 NCO 1 101 1 NCO NCO B . H 3 NCO 1 102 1 NCO NCO B . I 5 NA 1 103 1 NA NA B . J 6 HOH 1 201 2 HOH HOH A . J 6 HOH 2 202 3 HOH HOH A . J 6 HOH 3 203 6 HOH HOH A . J 6 HOH 4 204 8 HOH HOH A . J 6 HOH 5 205 9 HOH HOH A . J 6 HOH 6 206 12 HOH HOH A . J 6 HOH 7 207 14 HOH HOH A . J 6 HOH 8 208 15 HOH HOH A . J 6 HOH 9 209 16 HOH HOH A . J 6 HOH 10 210 17 HOH HOH A . J 6 HOH 11 211 18 HOH HOH A . J 6 HOH 12 212 23 HOH HOH A . J 6 HOH 13 213 24 HOH HOH A . K 6 HOH 1 201 1 HOH HOH B . K 6 HOH 2 202 4 HOH HOH B . K 6 HOH 3 203 5 HOH HOH B . K 6 HOH 4 204 7 HOH HOH B . K 6 HOH 5 205 10 HOH HOH B . K 6 HOH 6 206 11 HOH HOH B . K 6 HOH 7 207 13 HOH HOH B . K 6 HOH 8 208 19 HOH HOH B . K 6 HOH 9 209 20 HOH HOH B . K 6 HOH 10 210 21 HOH HOH B . K 6 HOH 11 211 22 HOH HOH B . K 6 HOH 12 212 25 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 XDS 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4MNB _cell.length_a 28.700 _cell.length_b 53.400 _cell.length_c 40.800 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MNB _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4MNB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.8 _exptl_crystal_grow.pdbx_details ;8% v/v MPD, 40 mM Na Cacodylate pH 5.8, 4 mM Hexamine Cobalt, 12 mM NaCl, 80 mM KCl, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-04-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8726 # _reflns.entry_id 4MNB _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 40.8 _reflns.d_resolution_high 1.4 _reflns.number_obs 6465 _reflns.number_all 6471 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4MNB _refine.ls_number_reflns_obs 6157 _refine.ls_number_reflns_all 6167 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.79 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 99.83 _refine.ls_R_factor_obs 0.21024 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20813 _refine.ls_R_factor_R_free 0.25341 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 301 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.B_iso_mean 19.544 _refine.aniso_B[1][1] 0.53 _refine.aniso_B[2][2] -0.34 _refine.aniso_B[3][3] -0.19 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.074 _refine.pdbx_overall_ESU_R_Free 0.081 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 224 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.number_atoms_solvent 25 _refine_hist.number_atoms_total 309 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 40.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.023 0.012 ? 311 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 9.433 1.513 ? 473 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr 0.098 0.200 ? 33 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.024 0.020 ? 165 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it 2.729 1.879 ? 311 ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined 4.847 19.790 ? 652 ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.436 _refine_ls_shell.number_reflns_R_work 448 _refine_ls_shell.R_factor_R_work 0.313 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.394 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 22 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4MNB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4MNB _struct.title 'Crystal Structure of a complex between the marine anticancer drug Variolin B and DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MNB _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA duplex, Intercalation, Drug binding, Nucleus, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 3 ? I N N 5 ? J N N 6 ? K N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4MNB _struct_ref.pdbx_db_accession 4MNB _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code CGTACG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4MNB A 1 ? 6 ? 4MNB 1 ? 6 ? 1 6 2 1 4MNB B 1 ? 6 ? 4MNB 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1030 ? 1 MORE -7 ? 1 'SSA (A^2)' 2810 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 2 N7 ? ? ? 1_555 E NCO . CO ? ? A DG 2 A NCO 103 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc2 metalc ? ? B DG 2 N7 ? ? ? 1_555 H NCO . CO ? ? B DG 8 B NCO 102 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc3 metalc ? ? B DG 2 OP2 ? ? ? 1_555 I NA . NA ? ? B DG 8 B NA 103 1_555 ? ? ? ? ? ? ? 2.736 ? ? metalc4 metalc ? ? B DG 6 N7 ? ? ? 1_555 G NCO . CO ? ? B DG 12 B NCO 101 1_555 ? ? ? ? ? ? ? 2.198 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 2 ? A DG 2 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N1 ? E NCO . ? A NCO 103 ? 1_555 91.2 ? 2 N7 ? A DG 2 ? A DG 2 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N3 ? E NCO . ? A NCO 103 ? 1_555 90.8 ? 3 N1 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N3 ? E NCO . ? A NCO 103 ? 1_555 90.7 ? 4 N7 ? A DG 2 ? A DG 2 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N4 ? E NCO . ? A NCO 103 ? 1_555 178.2 ? 5 N1 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N4 ? E NCO . ? A NCO 103 ? 1_555 87.0 ? 6 N3 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N4 ? E NCO . ? A NCO 103 ? 1_555 89.6 ? 7 N7 ? A DG 2 ? A DG 2 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N5 ? E NCO . ? A NCO 103 ? 1_555 89.4 ? 8 N1 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N5 ? E NCO . ? A NCO 103 ? 1_555 89.5 ? 9 N3 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N5 ? E NCO . ? A NCO 103 ? 1_555 179.7 ? 10 N4 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N5 ? E NCO . ? A NCO 103 ? 1_555 90.3 ? 11 N7 ? A DG 2 ? A DG 2 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N6 ? E NCO . ? A NCO 103 ? 1_555 90.9 ? 12 N1 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N6 ? E NCO . ? A NCO 103 ? 1_555 177.6 ? 13 N3 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N6 ? E NCO . ? A NCO 103 ? 1_555 88.1 ? 14 N4 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N6 ? E NCO . ? A NCO 103 ? 1_555 90.9 ? 15 N5 ? E NCO . ? A NCO 103 ? 1_555 CO ? E NCO . ? A NCO 103 ? 1_555 N6 ? E NCO . ? A NCO 103 ? 1_555 91.7 ? 16 N7 ? B DG 2 ? B DG 8 ? 1_555 CO ? H NCO . ? B NCO 102 ? 1_555 N1 ? H NCO . ? B NCO 102 ? 1_555 91.9 ? 17 N7 ? B DG 2 ? B DG 8 ? 1_555 CO ? H NCO . ? B NCO 102 ? 1_555 N2 ? H NCO . ? B NCO 102 ? 1_555 87.6 ? 18 N1 ? H NCO . ? B NCO 102 ? 1_555 CO ? H NCO . ? B NCO 102 ? 1_555 N2 ? H NCO . ? B NCO 102 ? 1_555 179.0 ? 19 N7 ? B DG 6 ? B DG 12 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N1 ? G NCO . ? B NCO 101 ? 1_555 88.2 ? 20 N7 ? B DG 6 ? B DG 12 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N4 ? G NCO . ? B NCO 101 ? 1_555 88.3 ? 21 N1 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N4 ? G NCO . ? B NCO 101 ? 1_555 176.0 ? 22 N7 ? B DG 6 ? B DG 12 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N5 ? G NCO . ? B NCO 101 ? 1_555 91.9 ? 23 N1 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N5 ? G NCO . ? B NCO 101 ? 1_555 86.3 ? 24 N4 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N5 ? G NCO . ? B NCO 101 ? 1_555 91.7 ? 25 N7 ? B DG 6 ? B DG 12 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N6 ? G NCO . ? B NCO 101 ? 1_555 87.1 ? 26 N1 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N6 ? G NCO . ? B NCO 101 ? 1_555 90.7 ? 27 N4 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N6 ? G NCO . ? B NCO 101 ? 1_555 91.3 ? 28 N5 ? G NCO . ? B NCO 101 ? 1_555 CO ? G NCO . ? B NCO 101 ? 1_555 N6 ? G NCO . ? B NCO 101 ? 1_555 176.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A VAR 101 ? 9 'BINDING SITE FOR RESIDUE VAR A 101' AC2 Software A VAR 102 ? 8 'BINDING SITE FOR RESIDUE VAR A 102' AC3 Software A NCO 103 ? 4 'BINDING SITE FOR RESIDUE NCO A 103' AC4 Software A CO 104 ? 4 'BINDING SITE FOR RESIDUE CO A 104' AC5 Software B NCO 101 ? 8 'BINDING SITE FOR RESIDUE NCO B 101' AC6 Software B NCO 102 ? 5 'BINDING SITE FOR RESIDUE NCO B 102' AC7 Software B NA 103 ? 4 'BINDING SITE FOR RESIDUE NA B 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DC A 5 ? DC A 5 . ? 1_555 ? 2 AC1 9 DG A 6 ? DG A 6 . ? 1_555 ? 3 AC1 9 VAR D . ? VAR A 102 . ? 2_655 ? 4 AC1 9 VAR D . ? VAR A 102 . ? 1_555 ? 5 AC1 9 HOH J . ? HOH A 207 . ? 1_555 ? 6 AC1 9 DC B 1 ? DC B 7 . ? 3_655 ? 7 AC1 9 DG B 2 ? DG B 8 . ? 1_555 ? 8 AC1 9 DG B 2 ? DG B 8 . ? 2_655 ? 9 AC1 9 NCO H . ? NCO B 102 . ? 1_555 ? 10 AC2 8 DC A 5 ? DC A 5 . ? 1_555 ? 11 AC2 8 DG A 6 ? DG A 6 . ? 1_555 ? 12 AC2 8 VAR C . ? VAR A 101 . ? 2_655 ? 13 AC2 8 VAR C . ? VAR A 101 . ? 1_555 ? 14 AC2 8 DC B 1 ? DC B 7 . ? 3_655 ? 15 AC2 8 DG B 2 ? DG B 8 . ? 1_555 ? 16 AC2 8 DG B 2 ? DG B 8 . ? 2_655 ? 17 AC2 8 NCO H . ? NCO B 102 . ? 1_555 ? 18 AC3 4 DG A 2 ? DG A 2 . ? 1_555 ? 19 AC3 4 DT A 3 ? DT A 3 . ? 1_555 ? 20 AC3 4 HOH J . ? HOH A 205 . ? 1_555 ? 21 AC3 4 DC B 5 ? DC B 11 . ? 6_545 ? 22 AC4 4 DG A 6 ? DG A 6 . ? 3_654 ? 23 AC4 4 DG A 6 ? DG A 6 . ? 2_655 ? 24 AC4 4 DG A 6 ? DG A 6 . ? 4_554 ? 25 AC4 4 DG A 6 ? DG A 6 . ? 1_555 ? 26 AC5 8 DA A 4 ? DA A 4 . ? 6_545 ? 27 AC5 8 DA A 4 ? DA A 4 . ? 8_444 ? 28 AC5 8 HOH J . ? HOH A 211 . ? 3_654 ? 29 AC5 8 HOH J . ? HOH A 211 . ? 1_455 ? 30 AC5 8 DG B 6 ? DG B 12 . ? 1_555 ? 31 AC5 8 DG B 6 ? DG B 12 . ? 3_554 ? 32 AC5 8 HOH K . ? HOH B 202 . ? 1_555 ? 33 AC5 8 HOH K . ? HOH B 202 . ? 3_554 ? 34 AC6 5 VAR C . ? VAR A 101 . ? 1_555 ? 35 AC6 5 VAR D . ? VAR A 102 . ? 1_555 ? 36 AC6 5 DC B 1 ? DC B 7 . ? 3_655 ? 37 AC6 5 DG B 2 ? DG B 8 . ? 1_555 ? 38 AC6 5 HOH K . ? HOH B 210 . ? 1_555 ? 39 AC7 4 DG B 2 ? DG B 8 . ? 1_555 ? 40 AC7 4 DG B 2 ? DG B 8 . ? 4_555 ? 41 AC7 4 DG B 2 ? DG B 8 . ? 3_655 ? 42 AC7 4 DG B 2 ? DG B 8 . ? 2_655 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 "O5'" _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 DG _pdbx_validate_close_contact.auth_seq_id_1 6 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N3 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 VAR _pdbx_validate_close_contact.auth_seq_id_2 102 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 6 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 6 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 6 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 94.04 _pdbx_validate_rmsd_angle.angle_target_value 105.70 _pdbx_validate_rmsd_angle.angle_deviation -11.66 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CO 104 ? F CO . 2 1 B NCO 101 ? G NCO . 3 1 B NA 103 ? I NA . 4 1 B HOH 209 ? K HOH . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id DC _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id DC _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CO CO CO N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 NA NA NA N N 148 NCO CO CO N N 149 NCO N1 N N N 150 NCO N2 N N N 151 NCO N3 N N N 152 NCO N4 N N N 153 NCO N5 N N N 154 NCO N6 N N N 155 NCO HN11 H N N 156 NCO HN12 H N N 157 NCO HN13 H N N 158 NCO HN21 H N N 159 NCO HN22 H N N 160 NCO HN23 H N N 161 NCO HN31 H N N 162 NCO HN32 H N N 163 NCO HN33 H N N 164 NCO HN41 H N N 165 NCO HN42 H N N 166 NCO HN43 H N N 167 NCO HN51 H N N 168 NCO HN52 H N N 169 NCO HN53 H N N 170 NCO HN61 H N N 171 NCO HN62 H N N 172 NCO HN63 H N N 173 VAR O1 O N N 174 VAR C1 C Y N 175 VAR C2 C Y N 176 VAR C3 C Y N 177 VAR N1 N Y N 178 VAR C4 C Y N 179 VAR N2 N Y N 180 VAR C5 C Y N 181 VAR N3 N N N 182 VAR N4 N Y N 183 VAR C6 C Y N 184 VAR C7 C Y N 185 VAR C8 C Y N 186 VAR C9 C Y N 187 VAR C10 C Y N 188 VAR C11 C Y N 189 VAR C14 C Y N 190 VAR C13 C Y N 191 VAR N7 N Y N 192 VAR C12 C Y N 193 VAR N5 N Y N 194 VAR N6 N N N 195 VAR HO1 H N N 196 VAR H2 H N N 197 VAR H3 H N N 198 VAR HN3 H N N 199 VAR HN3A H N N 200 VAR H6 H N N 201 VAR H7 H N N 202 VAR H14 H N N 203 VAR H13 H N N 204 VAR HN6 H N N 205 VAR HN6A H N N 206 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 NCO CO N1 sing N N 152 NCO CO N2 sing N N 153 NCO CO N3 sing N N 154 NCO CO N4 sing N N 155 NCO CO N5 sing N N 156 NCO CO N6 sing N N 157 NCO N1 HN11 sing N N 158 NCO N1 HN12 sing N N 159 NCO N1 HN13 sing N N 160 NCO N2 HN21 sing N N 161 NCO N2 HN22 sing N N 162 NCO N2 HN23 sing N N 163 NCO N3 HN31 sing N N 164 NCO N3 HN32 sing N N 165 NCO N3 HN33 sing N N 166 NCO N4 HN41 sing N N 167 NCO N4 HN42 sing N N 168 NCO N4 HN43 sing N N 169 NCO N5 HN51 sing N N 170 NCO N5 HN52 sing N N 171 NCO N5 HN53 sing N N 172 NCO N6 HN61 sing N N 173 NCO N6 HN62 sing N N 174 NCO N6 HN63 sing N N 175 VAR O1 C1 sing N N 176 VAR C1 C2 sing Y N 177 VAR C1 C10 doub Y N 178 VAR C2 C3 doub Y N 179 VAR C3 N1 sing Y N 180 VAR N1 C4 doub Y N 181 VAR C4 N2 sing Y N 182 VAR C4 C10 sing Y N 183 VAR N2 C5 sing Y N 184 VAR N2 C8 sing Y N 185 VAR C5 N3 sing N N 186 VAR C5 N4 doub Y N 187 VAR N4 C6 sing Y N 188 VAR C6 C7 doub Y N 189 VAR C7 C8 sing Y N 190 VAR C8 C9 doub Y N 191 VAR C9 C10 sing Y N 192 VAR C9 C11 sing Y N 193 VAR C11 C14 sing Y N 194 VAR C11 N5 doub Y N 195 VAR C14 C13 doub Y N 196 VAR C13 N7 sing Y N 197 VAR N7 C12 doub Y N 198 VAR C12 N5 sing Y N 199 VAR C12 N6 sing N N 200 VAR O1 HO1 sing N N 201 VAR C2 H2 sing N N 202 VAR C3 H3 sing N N 203 VAR N3 HN3 sing N N 204 VAR N3 HN3A sing N N 205 VAR C6 H6 sing N N 206 VAR C7 H7 sing N N 207 VAR C14 H14 sing N N 208 VAR C13 H13 sing N N 209 VAR N6 HN6 sing N N 210 VAR N6 HN6A sing N N 211 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4MNB 'double helix' 4MNB 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 5 1_555 -0.388 -0.124 -0.154 -10.245 7.043 2.152 1 A_DG2:DC11_B A 2 ? B 11 ? 19 1 1 A DT 3 1_555 B DA 4 1_555 0.100 -0.088 0.159 0.327 -0.012 2.304 2 A_DT3:DA10_B A 3 ? B 10 ? 20 1 1 A DA 4 1_555 B DT 3 1_555 0.154 -0.006 -0.191 -0.975 -0.355 -4.255 3 A_DA4:DT9_B A 4 ? B 9 ? 20 1 1 A DC 5 1_555 B DG 2 1_555 0.377 -0.104 0.021 16.860 -3.761 1.708 4 A_DC5:DG8_B A 5 ? B 8 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 5 1_555 A DT 3 1_555 B DA 4 1_555 -0.030 -0.276 3.123 -2.496 3.613 26.481 -1.479 -0.546 3.048 7.819 5.402 26.836 1 AA_DG2DT3:DA10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DT 3 1_555 B DA 4 1_555 A DA 4 1_555 B DT 3 1_555 -0.104 -0.599 3.291 3.424 1.708 37.880 -1.135 0.594 3.240 2.623 -5.258 38.066 2 AA_DT3DA4:DT9DA10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DA 4 1_555 B DT 3 1_555 A DC 5 1_555 B DG 2 1_555 0.919 -0.708 2.968 -3.646 5.612 26.813 -2.669 -2.695 2.623 11.870 7.710 27.621 3 AA_DA4DC5:DG8DT9_BB A 4 ? B 9 ? A 5 ? B 8 ? # _atom_sites.entry_id 4MNB _atom_sites.fract_transf_matrix[1][1] 0.034843 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018727 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024510 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N NA O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 P P . DG A 1 2 ? 13.689 -18.491 -5.484 1.00 32.32 ? 2 DG A P 1 ATOM 2 O OP1 . DG A 1 2 ? 12.238 -18.808 -5.421 1.00 30.18 ? 2 DG A OP1 1 ATOM 3 O OP2 . DG A 1 2 ? 14.080 -17.172 -4.962 1.00 38.27 ? 2 DG A OP2 1 ATOM 4 O "O5'" . DG A 1 2 ? 14.113 -18.371 -7.005 1.00 28.84 ? 2 DG A "O5'" 1 ATOM 5 C "C5'" . DG A 1 2 ? 13.842 -19.376 -7.958 1.00 23.71 ? 2 DG A "C5'" 1 ATOM 6 C "C4'" . DG A 1 2 ? 14.165 -18.806 -9.313 1.00 22.66 ? 2 DG A "C4'" 1 ATOM 7 O "O4'" . DG A 1 2 ? 13.101 -17.926 -9.731 1.00 21.10 ? 2 DG A "O4'" 1 ATOM 8 C "C3'" . DG A 1 2 ? 15.443 -17.992 -9.429 1.00 21.02 ? 2 DG A "C3'" 1 ATOM 9 O "O3'" . DG A 1 2 ? 15.930 -18.363 -10.714 1.00 24.04 ? 2 DG A "O3'" 1 ATOM 10 C "C2'" . DG A 1 2 ? 14.976 -16.542 -9.350 1.00 17.79 ? 2 DG A "C2'" 1 ATOM 11 C "C1'" . DG A 1 2 ? 13.605 -16.594 -9.979 1.00 15.30 ? 2 DG A "C1'" 1 ATOM 12 N N9 . DG A 1 2 ? 12.620 -15.669 -9.437 1.00 14.82 ? 2 DG A N9 1 ATOM 13 C C8 . DG A 1 2 ? 12.295 -15.615 -8.115 1.00 13.87 ? 2 DG A C8 1 ATOM 14 N N7 . DG A 1 2 ? 11.346 -14.759 -7.855 1.00 13.94 ? 2 DG A N7 1 ATOM 15 C C5 . DG A 1 2 ? 10.925 -14.318 -9.095 1.00 11.84 ? 2 DG A C5 1 ATOM 16 C C6 . DG A 1 2 ? 9.893 -13.419 -9.430 1.00 11.04 ? 2 DG A C6 1 ATOM 17 O O6 . DG A 1 2 ? 9.064 -12.865 -8.689 1.00 12.04 ? 2 DG A O6 1 ATOM 18 N N1 . DG A 1 2 ? 9.852 -13.191 -10.799 1.00 10.79 ? 2 DG A N1 1 ATOM 19 C C2 . DG A 1 2 ? 10.707 -13.748 -11.715 1.00 11.12 ? 2 DG A C2 1 ATOM 20 N N2 . DG A 1 2 ? 10.530 -13.394 -12.988 1.00 10.76 ? 2 DG A N2 1 ATOM 21 N N3 . DG A 1 2 ? 11.672 -14.604 -11.410 1.00 11.63 ? 2 DG A N3 1 ATOM 22 C C4 . DG A 1 2 ? 11.714 -14.853 -10.089 1.00 12.07 ? 2 DG A C4 1 ATOM 23 P P . DT A 1 3 ? 17.386 -17.902 -11.155 1.00 27.77 ? 3 DT A P 1 ATOM 24 O OP1 . DT A 1 3 ? 17.870 -18.841 -12.189 1.00 33.48 ? 3 DT A OP1 1 ATOM 25 O OP2 . DT A 1 3 ? 18.179 -17.548 -9.929 1.00 30.45 ? 3 DT A OP2 1 ATOM 26 O "O5'" . DT A 1 3 ? 17.161 -16.495 -11.873 1.00 25.02 ? 3 DT A "O5'" 1 ATOM 27 C "C5'" . DT A 1 3 ? 16.455 -16.475 -13.111 1.00 22.45 ? 3 DT A "C5'" 1 ATOM 28 C "C4'" . DT A 1 3 ? 16.075 -15.042 -13.379 1.00 19.47 ? 3 DT A "C4'" 1 ATOM 29 O "O4'" . DT A 1 3 ? 15.129 -14.535 -12.427 1.00 16.15 ? 3 DT A "O4'" 1 ATOM 30 C "C3'" . DT A 1 3 ? 17.245 -14.045 -13.394 1.00 17.36 ? 3 DT A "C3'" 1 ATOM 31 O "O3'" . DT A 1 3 ? 17.507 -13.782 -14.771 1.00 18.89 ? 3 DT A "O3'" 1 ATOM 32 C "C2'" . DT A 1 3 ? 16.731 -12.874 -12.566 1.00 16.92 ? 3 DT A "C2'" 1 ATOM 33 C "C1'" . DT A 1 3 ? 15.241 -13.135 -12.493 1.00 15.84 ? 3 DT A "C1'" 1 ATOM 34 N N1 . DT A 1 3 ? 14.504 -12.589 -11.330 1.00 13.46 ? 3 DT A N1 1 ATOM 35 C C2 . DT A 1 3 ? 13.445 -11.713 -11.562 1.00 13.00 ? 3 DT A C2 1 ATOM 36 O O2 . DT A 1 3 ? 13.129 -11.301 -12.670 1.00 12.71 ? 3 DT A O2 1 ATOM 37 N N3 . DT A 1 3 ? 12.779 -11.330 -10.436 1.00 12.78 ? 3 DT A N3 1 ATOM 38 C C4 . DT A 1 3 ? 13.069 -11.663 -9.126 1.00 15.70 ? 3 DT A C4 1 ATOM 39 O O4 . DT A 1 3 ? 12.359 -11.225 -8.227 1.00 15.05 ? 3 DT A O4 1 ATOM 40 C C5 . DT A 1 3 ? 14.190 -12.569 -8.948 1.00 14.92 ? 3 DT A C5 1 ATOM 41 C C7 . DT A 1 3 ? 14.555 -12.998 -7.556 1.00 15.35 ? 3 DT A C7 1 ATOM 42 C C6 . DT A 1 3 ? 14.843 -12.993 -10.042 1.00 15.07 ? 3 DT A C6 1 ATOM 43 P P . DA A 1 4 ? 18.484 -12.621 -15.273 1.00 19.42 ? 4 DA A P 1 ATOM 44 O OP1 . DA A 1 4 ? 18.878 -12.967 -16.656 1.00 22.74 ? 4 DA A OP1 1 ATOM 45 O OP2 . DA A 1 4 ? 19.443 -12.255 -14.198 1.00 20.88 ? 4 DA A OP2 1 ATOM 46 O "O5'" . DA A 1 4 ? 17.495 -11.390 -15.392 1.00 16.70 ? 4 DA A "O5'" 1 ATOM 47 C "C5'" . DA A 1 4 ? 16.501 -11.407 -16.410 1.00 16.07 ? 4 DA A "C5'" 1 ATOM 48 C "C4'" . DA A 1 4 ? 15.844 -10.055 -16.458 1.00 15.33 ? 4 DA A "C4'" 1 ATOM 49 O "O4'" . DA A 1 4 ? 15.020 -9.827 -15.271 1.00 15.83 ? 4 DA A "O4'" 1 ATOM 50 C "C3'" . DA A 1 4 ? 16.863 -8.908 -16.529 1.00 17.91 ? 4 DA A "C3'" 1 ATOM 51 O "O3'" . DA A 1 4 ? 16.380 -8.136 -17.609 1.00 19.78 ? 4 DA A "O3'" 1 ATOM 52 C "C2'" . DA A 1 4 ? 16.728 -8.195 -15.190 1.00 17.10 ? 4 DA A "C2'" 1 ATOM 53 C "C1'" . DA A 1 4 ? 15.293 -8.515 -14.756 1.00 15.73 ? 4 DA A "C1'" 1 ATOM 54 N N9 . DA A 1 4 ? 15.111 -8.567 -13.305 1.00 14.17 ? 4 DA A N9 1 ATOM 55 C C8 . DA A 1 4 ? 15.903 -9.246 -12.402 1.00 11.89 ? 4 DA A C8 1 ATOM 56 N N7 . DA A 1 4 ? 15.465 -9.168 -11.162 1.00 13.57 ? 4 DA A N7 1 ATOM 57 C C5 . DA A 1 4 ? 14.353 -8.340 -11.250 1.00 12.42 ? 4 DA A C5 1 ATOM 58 C C6 . DA A 1 4 ? 13.488 -7.812 -10.275 1.00 11.92 ? 4 DA A C6 1 ATOM 59 N N6 . DA A 1 4 ? 13.613 -8.072 -8.981 1.00 13.32 ? 4 DA A N6 1 ATOM 60 N N1 . DA A 1 4 ? 12.468 -7.020 -10.686 1.00 12.15 ? 4 DA A N1 1 ATOM 61 C C2 . DA A 1 4 ? 12.352 -6.763 -11.989 1.00 11.64 ? 4 DA A C2 1 ATOM 62 N N3 . DA A 1 4 ? 13.116 -7.182 -12.999 1.00 13.01 ? 4 DA A N3 1 ATOM 63 C C4 . DA A 1 4 ? 14.112 -7.972 -12.561 1.00 11.91 ? 4 DA A C4 1 ATOM 64 P P . DC A 1 5 ? 17.262 -6.928 -18.225 1.00 29.07 ? 5 DC A P 1 ATOM 65 O OP1 . DC A 1 5 ? 16.792 -6.724 -19.616 1.00 27.55 ? 5 DC A OP1 1 ATOM 66 O OP2 . DC A 1 5 ? 18.669 -7.114 -17.848 1.00 30.11 ? 5 DC A OP2 1 ATOM 67 O "O5'" . DC A 1 5 ? 16.887 -5.666 -17.318 1.00 23.01 ? 5 DC A "O5'" 1 ATOM 68 C "C5'" . DC A 1 5 ? 15.559 -5.169 -17.340 1.00 21.01 ? 5 DC A "C5'" 1 ATOM 69 C "C4'" . DC A 1 5 ? 15.360 -4.185 -16.204 1.00 21.81 ? 5 DC A "C4'" 1 ATOM 70 O "O4'" . DC A 1 5 ? 15.238 -4.861 -14.931 1.00 19.85 ? 5 DC A "O4'" 1 ATOM 71 C "C3'" . DC A 1 5 ? 16.527 -3.206 -16.024 1.00 23.37 ? 5 DC A "C3'" 1 ATOM 72 O "O3'" . DC A 1 5 ? 16.150 -1.908 -16.510 1.00 25.11 ? 5 DC A "O3'" 1 ATOM 73 C "C2'" . DC A 1 5 ? 16.901 -3.362 -14.562 1.00 21.22 ? 5 DC A "C2'" 1 ATOM 74 C "C1'" . DC A 1 5 ? 15.656 -3.970 -13.952 1.00 19.60 ? 5 DC A "C1'" 1 ATOM 75 N N1 . DC A 1 5 ? 15.889 -4.720 -12.706 1.00 16.62 ? 5 DC A N1 1 ATOM 76 C C2 . DC A 1 5 ? 15.063 -4.437 -11.604 1.00 14.98 ? 5 DC A C2 1 ATOM 77 O O2 . DC A 1 5 ? 14.068 -3.735 -11.771 1.00 17.53 ? 5 DC A O2 1 ATOM 78 N N3 . DC A 1 5 ? 15.344 -4.995 -10.408 1.00 15.88 ? 5 DC A N3 1 ATOM 79 C C4 . DC A 1 5 ? 16.377 -5.838 -10.299 1.00 12.82 ? 5 DC A C4 1 ATOM 80 N N4 . DC A 1 5 ? 16.598 -6.395 -9.115 1.00 15.46 ? 5 DC A N4 1 ATOM 81 C C5 . DC A 1 5 ? 17.239 -6.132 -11.404 1.00 17.08 ? 5 DC A C5 1 ATOM 82 C C6 . DC A 1 5 ? 16.998 -5.505 -12.556 1.00 14.82 ? 5 DC A C6 1 ATOM 83 P P . DG A 1 6 ? 17.221 -0.678 -16.541 1.00 28.63 ? 6 DG A P 1 ATOM 84 O OP1 . DG A 1 6 ? 16.840 0.123 -17.711 1.00 37.04 ? 6 DG A OP1 1 ATOM 85 O OP2 . DG A 1 6 ? 18.611 -1.172 -16.319 1.00 26.41 ? 6 DG A OP2 1 ATOM 86 O "O5'" . DG A 1 6 ? 17.117 0.020 -15.097 1.00 24.59 ? 6 DG A "O5'" 1 ATOM 87 C "C5'" . DG A 1 6 ? 16.009 0.815 -14.739 1.00 22.23 ? 6 DG A "C5'" 1 ATOM 88 C "C4'" . DG A 1 6 ? 16.491 2.120 -14.147 1.00 21.96 ? 6 DG A "C4'" 1 ATOM 89 O "O4'" . DG A 1 6 ? 17.067 1.867 -12.842 1.00 20.45 ? 6 DG A "O4'" 1 ATOM 90 C "C3'" . DG A 1 6 ? 17.607 2.794 -14.940 1.00 22.19 ? 6 DG A "C3'" 1 ATOM 91 O "O3'" . DG A 1 6 ? 17.025 3.628 -15.922 1.00 22.48 ? 6 DG A "O3'" 1 ATOM 92 C "C2'" . DG A 1 6 ? 18.375 3.561 -13.882 1.00 20.64 ? 6 DG A "C2'" 1 ATOM 93 C "C1'" . DG A 1 6 ? 18.241 2.675 -12.658 1.00 18.65 ? 6 DG A "C1'" 1 ATOM 94 N N9 . DG A 1 6 ? 19.349 1.769 -12.397 1.00 18.36 ? 6 DG A N9 1 ATOM 95 C C8 . DG A 1 6 ? 20.327 1.389 -13.281 1.00 19.48 ? 6 DG A C8 1 ATOM 96 N N7 . DG A 1 6 ? 21.185 0.548 -12.769 1.00 20.19 ? 6 DG A N7 1 ATOM 97 C C5 . DG A 1 6 ? 20.707 0.307 -11.487 1.00 17.72 ? 6 DG A C5 1 ATOM 98 C C6 . DG A 1 6 ? 21.206 -0.552 -10.462 1.00 16.27 ? 6 DG A C6 1 ATOM 99 O O6 . DG A 1 6 ? 22.194 -1.302 -10.489 1.00 23.15 ? 6 DG A O6 1 ATOM 100 N N1 . DG A 1 6 ? 20.414 -0.503 -9.323 1.00 16.78 ? 6 DG A N1 1 ATOM 101 C C2 . DG A 1 6 ? 19.325 0.320 -9.149 1.00 14.71 ? 6 DG A C2 1 ATOM 102 N N2 . DG A 1 6 ? 18.706 0.229 -7.963 1.00 15.81 ? 6 DG A N2 1 ATOM 103 N N3 . DG A 1 6 ? 18.839 1.118 -10.098 1.00 15.89 ? 6 DG A N3 1 ATOM 104 C C4 . DG A 1 6 ? 19.589 1.074 -11.228 1.00 16.19 ? 6 DG A C4 1 ATOM 105 O "O5'" . DC B 1 1 ? 6.307 -4.099 0.992 1.00 43.90 ? 7 DC B "O5'" 1 ATOM 106 C "C5'" . DC B 1 1 ? 6.667 -2.791 0.535 1.00 38.70 ? 7 DC B "C5'" 1 ATOM 107 C "C4'" . DC B 1 1 ? 7.887 -2.336 1.300 1.00 34.96 ? 7 DC B "C4'" 1 ATOM 108 O "O4'" . DC B 1 1 ? 7.510 -2.019 2.654 1.00 32.22 ? 7 DC B "O4'" 1 ATOM 109 C "C3'" . DC B 1 1 ? 9.034 -3.345 1.398 1.00 31.86 ? 7 DC B "C3'" 1 ATOM 110 O "O3'" . DC B 1 1 ? 10.190 -2.545 1.236 1.00 33.48 ? 7 DC B "O3'" 1 ATOM 111 C "C2'" . DC B 1 1 ? 9.009 -3.804 2.852 1.00 28.61 ? 7 DC B "C2'" 1 ATOM 112 C "C1'" . DC B 1 1 ? 8.433 -2.594 3.564 1.00 27.73 ? 7 DC B "C1'" 1 ATOM 113 N N1 . DC B 1 1 ? 7.732 -2.795 4.855 1.00 25.65 ? 7 DC B N1 1 ATOM 114 C C2 . DC B 1 1 ? 8.145 -2.008 5.939 1.00 22.34 ? 7 DC B C2 1 ATOM 115 O O2 . DC B 1 1 ? 9.120 -1.240 5.789 1.00 24.03 ? 7 DC B O2 1 ATOM 116 N N3 . DC B 1 1 ? 7.486 -2.112 7.118 1.00 22.08 ? 7 DC B N3 1 ATOM 117 C C4 . DC B 1 1 ? 6.486 -2.987 7.254 1.00 23.49 ? 7 DC B C4 1 ATOM 118 N N4 . DC B 1 1 ? 5.879 -3.058 8.445 1.00 25.13 ? 7 DC B N4 1 ATOM 119 C C5 . DC B 1 1 ? 6.018 -3.771 6.156 1.00 28.93 ? 7 DC B C5 1 ATOM 120 C C6 . DC B 1 1 ? 6.649 -3.625 4.977 1.00 26.20 ? 7 DC B C6 1 ATOM 121 P P . DG B 1 2 ? 11.265 -2.799 0.092 1.00 34.43 ? 8 DG B P 1 ATOM 122 O OP1 . DG B 1 2 ? 11.578 -4.242 -0.010 1.00 36.07 ? 8 DG B OP1 1 ATOM 123 O OP2 . DG B 1 2 ? 12.359 -1.844 0.352 1.00 34.08 ? 8 DG B OP2 1 ATOM 124 O "O5'" . DG B 1 2 ? 10.449 -2.485 -1.242 1.00 29.39 ? 8 DG B "O5'" 1 ATOM 125 C "C5'" . DG B 1 2 ? 9.887 -1.185 -1.481 1.00 27.34 ? 8 DG B "C5'" 1 ATOM 126 C "C4'" . DG B 1 2 ? 9.751 -0.954 -2.968 1.00 23.52 ? 8 DG B "C4'" 1 ATOM 127 O "O4'" . DG B 1 2 ? 11.054 -0.906 -3.578 1.00 22.71 ? 8 DG B "O4'" 1 ATOM 128 C "C3'" . DG B 1 2 ? 9.003 -2.049 -3.727 1.00 20.85 ? 8 DG B "C3'" 1 ATOM 129 O "O3'" . DG B 1 2 ? 7.620 -1.754 -3.617 1.00 20.07 ? 8 DG B "O3'" 1 ATOM 130 C "C2'" . DG B 1 2 ? 9.498 -1.812 -5.140 1.00 20.04 ? 8 DG B "C2'" 1 ATOM 131 C "C1'" . DG B 1 2 ? 10.935 -1.340 -4.933 1.00 18.55 ? 8 DG B "C1'" 1 ATOM 132 N N9 . DG B 1 2 ? 11.910 -2.402 -5.137 1.00 17.54 ? 8 DG B N9 1 ATOM 133 C C8 . DG B 1 2 ? 12.517 -3.136 -4.152 1.00 20.19 ? 8 DG B C8 1 ATOM 134 N N7 . DG B 1 2 ? 13.361 -4.014 -4.616 1.00 20.52 ? 8 DG B N7 1 ATOM 135 C C5 . DG B 1 2 ? 13.242 -3.908 -5.996 1.00 15.36 ? 8 DG B C5 1 ATOM 136 C C6 . DG B 1 2 ? 13.914 -4.601 -7.023 1.00 14.56 ? 8 DG B C6 1 ATOM 137 O O6 . DG B 1 2 ? 14.789 -5.464 -6.923 1.00 15.96 ? 8 DG B O6 1 ATOM 138 N N1 . DG B 1 2 ? 13.584 -4.094 -8.274 1.00 14.66 ? 8 DG B N1 1 ATOM 139 C C2 . DG B 1 2 ? 12.643 -3.121 -8.504 1.00 15.18 ? 8 DG B C2 1 ATOM 140 N N2 . DG B 1 2 ? 12.398 -2.804 -9.790 1.00 14.72 ? 8 DG B N2 1 ATOM 141 N N3 . DG B 1 2 ? 12.031 -2.462 -7.556 1.00 15.36 ? 8 DG B N3 1 ATOM 142 C C4 . DG B 1 2 ? 12.373 -2.899 -6.335 1.00 15.42 ? 8 DG B C4 1 ATOM 143 P P . DT B 1 3 ? 6.515 -2.814 -4.048 1.00 22.14 ? 9 DT B P 1 ATOM 144 O OP1 . DT B 1 3 ? 5.216 -2.289 -3.654 1.00 25.16 ? 9 DT B OP1 1 ATOM 145 O OP2 . DT B 1 3 ? 7.054 -4.119 -3.598 1.00 23.33 ? 9 DT B OP2 1 ATOM 146 O "O5'" . DT B 1 3 ? 6.523 -2.741 -5.640 1.00 19.12 ? 9 DT B "O5'" 1 ATOM 147 C "C5'" . DT B 1 3 ? 6.153 -1.545 -6.397 1.00 17.90 ? 9 DT B "C5'" 1 ATOM 148 C "C4'" . DT B 1 3 ? 6.314 -1.904 -7.855 1.00 18.60 ? 9 DT B "C4'" 1 ATOM 149 O "O4'" . DT B 1 3 ? 7.644 -2.422 -8.085 1.00 17.67 ? 9 DT B "O4'" 1 ATOM 150 C "C3'" . DT B 1 3 ? 5.344 -2.998 -8.355 1.00 17.33 ? 9 DT B "C3'" 1 ATOM 151 O "O3'" . DT B 1 3 ? 4.962 -2.568 -9.650 1.00 21.74 ? 9 DT B "O3'" 1 ATOM 152 C "C2'" . DT B 1 3 ? 6.217 -4.236 -8.431 1.00 16.74 ? 9 DT B "C2'" 1 ATOM 153 C "C1'" . DT B 1 3 ? 7.572 -3.674 -8.769 1.00 15.71 ? 9 DT B "C1'" 1 ATOM 154 N N1 . DT B 1 3 ? 8.681 -4.484 -8.340 1.00 14.51 ? 9 DT B N1 1 ATOM 155 C C2 . DT B 1 3 ? 9.581 -4.957 -9.285 1.00 13.77 ? 9 DT B C2 1 ATOM 156 O O2 . DT B 1 3 ? 9.491 -4.717 -10.479 1.00 15.75 ? 9 DT B O2 1 ATOM 157 N N3 . DT B 1 3 ? 10.581 -5.725 -8.781 1.00 13.68 ? 9 DT B N3 1 ATOM 158 C C4 . DT B 1 3 ? 10.755 -6.102 -7.474 1.00 13.76 ? 9 DT B C4 1 ATOM 159 O O4 . DT B 1 3 ? 11.706 -6.780 -7.177 1.00 15.15 ? 9 DT B O4 1 ATOM 160 C C5 . DT B 1 3 ? 9.807 -5.548 -6.526 1.00 14.23 ? 9 DT B C5 1 ATOM 161 C C7 . DT B 1 3 ? 9.947 -5.891 -5.073 1.00 17.63 ? 9 DT B C7 1 ATOM 162 C C6 . DT B 1 3 ? 8.826 -4.776 -6.998 1.00 13.26 ? 9 DT B C6 1 ATOM 163 P P . DA B 1 4 ? 3.889 -3.377 -10.562 1.00 22.44 ? 10 DA B P 1 ATOM 164 O OP1 . DA B 1 4 ? 3.123 -2.315 -11.195 1.00 22.82 ? 10 DA B OP1 1 ATOM 165 O OP2 . DA B 1 4 ? 3.257 -4.413 -9.729 1.00 22.16 ? 10 DA B OP2 1 ATOM 166 O "O5'" . DA B 1 4 ? 4.817 -4.143 -11.595 1.00 21.43 ? 10 DA B "O5'" 1 ATOM 167 C "C5'" . DA B 1 4 ? 5.604 -3.411 -12.511 1.00 18.64 ? 10 DA B "C5'" 1 ATOM 168 C "C4'" . DA B 1 4 ? 6.157 -4.364 -13.535 1.00 16.77 ? 10 DA B "C4'" 1 ATOM 169 O "O4'" . DA B 1 4 ? 7.262 -5.159 -13.027 1.00 17.37 ? 10 DA B "O4'" 1 ATOM 170 C "C3'" . DA B 1 4 ? 5.122 -5.370 -14.043 1.00 15.72 ? 10 DA B "C3'" 1 ATOM 171 O "O3'" . DA B 1 4 ? 5.180 -5.433 -15.486 1.00 17.88 ? 10 DA B "O3'" 1 ATOM 172 C "C2'" . DA B 1 4 ? 5.486 -6.653 -13.316 1.00 15.64 ? 10 DA B "C2'" 1 ATOM 173 C "C1'" . DA B 1 4 ? 7.001 -6.557 -13.170 1.00 15.67 ? 10 DA B "C1'" 1 ATOM 174 N N9 . DA B 1 4 ? 7.523 -7.179 -11.975 1.00 12.03 ? 10 DA B N9 1 ATOM 175 C C8 . DA B 1 4 ? 7.081 -6.928 -10.703 1.00 12.45 ? 10 DA B C8 1 ATOM 176 N N7 . DA B 1 4 ? 7.734 -7.579 -9.782 1.00 13.09 ? 10 DA B N7 1 ATOM 177 C C5 . DA B 1 4 ? 8.713 -8.269 -10.491 1.00 11.30 ? 10 DA B C5 1 ATOM 178 C C6 . DA B 1 4 ? 9.728 -9.120 -10.095 1.00 9.59 ? 10 DA B C6 1 ATOM 179 N N6 . DA B 1 4 ? 9.979 -9.393 -8.823 1.00 11.70 ? 10 DA B N6 1 ATOM 180 N N1 . DA B 1 4 ? 10.528 -9.648 -11.041 1.00 10.76 ? 10 DA B N1 1 ATOM 181 C C2 . DA B 1 4 ? 10.262 -9.371 -12.326 1.00 9.59 ? 10 DA B C2 1 ATOM 182 N N3 . DA B 1 4 ? 9.370 -8.534 -12.824 1.00 10.83 ? 10 DA B N3 1 ATOM 183 C C4 . DA B 1 4 ? 8.583 -8.042 -11.844 1.00 11.40 ? 10 DA B C4 1 ATOM 184 P P . DC B 1 5 ? 4.031 -6.236 -16.300 1.00 19.56 ? 11 DC B P 1 ATOM 185 O OP1 . DC B 1 5 ? 4.077 -5.714 -17.650 1.00 21.35 ? 11 DC B OP1 1 ATOM 186 O OP2 . DC B 1 5 ? 2.844 -6.362 -15.522 1.00 18.77 ? 11 DC B OP2 1 ATOM 187 O "O5'" . DC B 1 5 ? 4.674 -7.712 -16.400 1.00 17.93 ? 11 DC B "O5'" 1 ATOM 188 C "C5'" . DC B 1 5 ? 5.884 -8.009 -17.120 1.00 14.93 ? 11 DC B "C5'" 1 ATOM 189 C "C4'" . DC B 1 5 ? 6.241 -9.462 -16.841 1.00 12.60 ? 11 DC B "C4'" 1 ATOM 190 O "O4'" . DC B 1 5 ? 6.670 -9.610 -15.441 1.00 12.80 ? 11 DC B "O4'" 1 ATOM 191 C "C3'" . DC B 1 5 ? 5.077 -10.462 -17.007 1.00 12.95 ? 11 DC B "C3'" 1 ATOM 192 O "O3'" . DC B 1 5 ? 5.582 -11.474 -17.880 1.00 12.44 ? 11 DC B "O3'" 1 ATOM 193 C "C2'" . DC B 1 5 ? 4.804 -10.945 -15.582 1.00 11.98 ? 11 DC B "C2'" 1 ATOM 194 C "C1'" . DC B 1 5 ? 6.188 -10.860 -14.990 1.00 11.87 ? 11 DC B "C1'" 1 ATOM 195 N N1 . DC B 1 5 ? 6.318 -10.905 -13.526 1.00 10.77 ? 11 DC B N1 1 ATOM 196 C C2 . DC B 1 5 ? 7.410 -11.575 -12.974 1.00 10.50 ? 11 DC B C2 1 ATOM 197 O O2 . DC B 1 5 ? 8.246 -12.085 -13.721 1.00 11.27 ? 11 DC B O2 1 ATOM 198 N N3 . DC B 1 5 ? 7.602 -11.530 -11.648 1.00 9.79 ? 11 DC B N3 1 ATOM 199 C C4 . DC B 1 5 ? 6.732 -10.902 -10.868 1.00 8.91 ? 11 DC B C4 1 ATOM 200 N N4 . DC B 1 5 ? 6.917 -11.003 -9.543 1.00 10.73 ? 11 DC B N4 1 ATOM 201 C C5 . DC B 1 5 ? 5.638 -10.165 -11.391 1.00 9.44 ? 11 DC B C5 1 ATOM 202 C C6 . DC B 1 5 ? 5.463 -10.197 -12.722 1.00 10.12 ? 11 DC B C6 1 ATOM 203 P P . DG B 1 6 ? 4.535 -12.428 -18.686 1.00 12.79 ? 12 DG B P 1 ATOM 204 O OP1 . DG B 1 6 ? 5.306 -13.052 -19.768 1.00 14.29 ? 12 DG B OP1 1 ATOM 205 O OP2 . DG B 1 6 ? 3.371 -11.628 -19.038 1.00 13.50 ? 12 DG B OP2 1 ATOM 206 O "O5'" . DG B 1 6 ? 4.139 -13.559 -17.618 1.00 11.64 ? 12 DG B "O5'" 1 ATOM 207 C "C5'" . DG B 1 6 ? 5.198 -14.422 -17.055 1.00 11.06 ? 12 DG B "C5'" 1 ATOM 208 C "C4'" . DG B 1 6 ? 4.494 -15.540 -16.309 1.00 10.38 ? 12 DG B "C4'" 1 ATOM 209 O "O4'" . DG B 1 6 ? 3.527 -15.002 -15.373 1.00 12.08 ? 12 DG B "O4'" 1 ATOM 210 C "C3'" . DG B 1 6 ? 3.673 -16.476 -17.216 1.00 10.77 ? 12 DG B "C3'" 1 ATOM 211 O "O3'" . DG B 1 6 ? 4.418 -17.641 -17.554 1.00 12.87 ? 12 DG B "O3'" 1 ATOM 212 C "C2'" . DG B 1 6 ? 2.460 -16.821 -16.353 1.00 12.81 ? 12 DG B "C2'" 1 ATOM 213 C "C1'" . DG B 1 6 ? 2.233 -15.513 -15.619 1.00 12.63 ? 12 DG B "C1'" 1 ATOM 214 N N9 . DG B 1 6 ? 1.547 -14.545 -16.457 1.00 12.43 ? 12 DG B N9 1 ATOM 215 C C8 . DG B 1 6 ? 1.160 -14.703 -17.778 1.00 13.30 ? 12 DG B C8 1 ATOM 216 N N7 . DG B 1 6 ? 0.650 -13.616 -18.301 1.00 13.34 ? 12 DG B N7 1 ATOM 217 C C5 . DG B 1 6 ? 0.797 -12.658 -17.299 1.00 13.38 ? 12 DG B C5 1 ATOM 218 C C6 . DG B 1 6 ? 0.464 -11.278 -17.291 1.00 14.78 ? 12 DG B C6 1 ATOM 219 O O6 . DG B 1 6 ? -0.050 -10.610 -18.197 1.00 16.89 ? 12 DG B O6 1 ATOM 220 N N1 . DG B 1 6 ? 0.737 -10.688 -16.057 1.00 13.87 ? 12 DG B N1 1 ATOM 221 C C2 . DG B 1 6 ? 1.345 -11.330 -14.992 1.00 12.07 ? 12 DG B C2 1 ATOM 222 N N2 . DG B 1 6 ? 1.547 -10.576 -13.877 1.00 13.03 ? 12 DG B N2 1 ATOM 223 N N3 . DG B 1 6 ? 1.650 -12.621 -14.985 1.00 11.39 ? 12 DG B N3 1 ATOM 224 C C4 . DG B 1 6 ? 1.330 -13.222 -16.149 1.00 11.78 ? 12 DG B C4 1 HETATM 225 O O1 . VAR C 2 . ? 17.349 -3.931 -5.702 0.50 33.10 ? 101 VAR A O1 1 HETATM 226 C C1 . VAR C 2 . ? 18.332 -4.566 -6.406 0.50 26.08 ? 101 VAR A C1 1 HETATM 227 C C2 . VAR C 2 . ? 19.098 -5.571 -5.796 0.50 27.27 ? 101 VAR A C2 1 HETATM 228 C C3 . VAR C 2 . ? 20.124 -6.225 -6.466 0.50 28.60 ? 101 VAR A C3 1 HETATM 229 N N1 . VAR C 2 . ? 20.381 -5.869 -7.729 0.50 27.01 ? 101 VAR A N1 1 HETATM 230 C C4 . VAR C 2 . ? 19.613 -4.904 -8.312 0.50 23.05 ? 101 VAR A C4 1 HETATM 231 N N2 . VAR C 2 . ? 19.822 -4.545 -9.543 0.50 22.90 ? 101 VAR A N2 1 HETATM 232 C C5 . VAR C 2 . ? 20.806 -5.127 -10.258 0.50 22.11 ? 101 VAR A C5 1 HETATM 233 N N3 . VAR C 2 . ? 21.563 -6.110 -9.715 0.50 24.62 ? 101 VAR A N3 1 HETATM 234 N N4 . VAR C 2 . ? 20.997 -4.739 -11.532 0.50 23.47 ? 101 VAR A N4 1 HETATM 235 C C6 . VAR C 2 . ? 20.157 -3.742 -11.964 0.50 25.32 ? 101 VAR A C6 1 HETATM 236 C C7 . VAR C 2 . ? 19.114 -3.127 -11.171 0.50 23.76 ? 101 VAR A C7 1 HETATM 237 C C8 . VAR C 2 . ? 18.937 -3.581 -9.866 0.50 21.50 ? 101 VAR A C8 1 HETATM 238 C C9 . VAR C 2 . ? 18.072 -3.264 -8.749 0.50 21.24 ? 101 VAR A C9 1 HETATM 239 C C10 . VAR C 2 . ? 18.606 -4.199 -7.696 0.50 23.74 ? 101 VAR A C10 1 HETATM 240 C C11 . VAR C 2 . ? 16.925 -2.310 -8.433 0.50 16.63 ? 101 VAR A C11 1 HETATM 241 C C14 . VAR C 2 . ? 16.215 -1.549 -9.379 0.50 16.96 ? 101 VAR A C14 1 HETATM 242 C C13 . VAR C 2 . ? 15.185 -0.704 -8.897 0.50 17.02 ? 101 VAR A C13 1 HETATM 243 N N7 . VAR C 2 . ? 14.895 -0.600 -7.603 0.50 17.73 ? 101 VAR A N7 1 HETATM 244 C C12 . VAR C 2 . ? 15.556 -1.299 -6.666 0.50 17.97 ? 101 VAR A C12 1 HETATM 245 N N5 . VAR C 2 . ? 16.559 -2.145 -7.100 0.50 18.21 ? 101 VAR A N5 1 HETATM 246 N N6 . VAR C 2 . ? 15.167 -1.130 -5.349 0.50 19.28 ? 101 VAR A N6 1 HETATM 247 O O1 . VAR D 2 . ? 15.685 -1.773 -7.586 0.50 20.29 ? 102 VAR A O1 1 HETATM 248 C C1 . VAR D 2 . ? 15.823 -1.406 -8.886 0.50 19.89 ? 102 VAR A C1 1 HETATM 249 C C2 . VAR D 2 . ? 14.940 -0.500 -9.458 0.50 20.51 ? 102 VAR A C2 1 HETATM 250 C C3 . VAR D 2 . ? 15.154 -0.184 -10.789 0.50 20.17 ? 102 VAR A C3 1 HETATM 251 N N1 . VAR D 2 . ? 16.174 -0.686 -11.526 0.50 22.52 ? 102 VAR A N1 1 HETATM 252 C C4 . VAR D 2 . ? 17.030 -1.537 -10.962 0.50 20.51 ? 102 VAR A C4 1 HETATM 253 N N2 . VAR D 2 . ? 18.066 -2.111 -11.491 0.50 20.66 ? 102 VAR A N2 1 HETATM 254 C C5 . VAR D 2 . ? 18.493 -1.975 -12.688 0.50 23.58 ? 102 VAR A C5 1 HETATM 255 N N3 . VAR D 2 . ? 17.709 -1.104 -13.336 0.50 28.13 ? 102 VAR A N3 1 HETATM 256 N N4 . VAR D 2 . ? 19.583 -2.622 -13.205 0.50 23.59 ? 102 VAR A N4 1 HETATM 257 C C6 . VAR D 2 . ? 20.243 -3.469 -12.387 0.50 21.79 ? 102 VAR A C6 1 HETATM 258 C C7 . VAR D 2 . ? 19.779 -3.671 -11.040 0.50 21.95 ? 102 VAR A C7 1 HETATM 259 C C8 . VAR D 2 . ? 18.640 -2.930 -10.663 0.50 20.77 ? 102 VAR A C8 1 HETATM 260 C C9 . VAR D 2 . ? 17.901 -2.832 -9.542 0.50 20.43 ? 102 VAR A C9 1 HETATM 261 C C10 . VAR D 2 . ? 16.833 -1.893 -9.700 0.50 21.05 ? 102 VAR A C10 1 HETATM 262 C C11 . VAR D 2 . ? 18.087 -3.417 -8.262 0.50 23.59 ? 102 VAR A C11 1 HETATM 263 C C14 . VAR D 2 . ? 18.990 -4.434 -7.995 0.50 25.55 ? 102 VAR A C14 1 HETATM 264 C C13 . VAR D 2 . ? 18.992 -4.823 -6.674 0.50 25.79 ? 102 VAR A C13 1 HETATM 265 N N7 . VAR D 2 . ? 18.176 -4.152 -5.815 0.50 31.06 ? 102 VAR A N7 1 HETATM 266 C C12 . VAR D 2 . ? 17.332 -3.126 -6.159 0.50 28.39 ? 102 VAR A C12 1 HETATM 267 N N5 . VAR D 2 . ? 17.286 -2.798 -7.420 0.50 24.84 ? 102 VAR A N5 1 HETATM 268 N N6 . VAR D 2 . ? 16.497 -2.438 -5.312 0.50 31.25 ? 102 VAR A N6 1 HETATM 269 CO CO . NCO E 3 . ? 10.647 -14.444 -5.840 1.00 21.70 3 103 NCO A CO 1 HETATM 270 N N1 . NCO E 3 . ? 11.006 -12.440 -5.983 1.00 20.83 ? 103 NCO A N1 1 HETATM 271 N N3 . NCO E 3 . ? 8.748 -14.178 -6.511 1.00 21.75 ? 103 NCO A N3 1 HETATM 272 N N4 . NCO E 3 . ? 9.972 -14.064 -3.823 1.00 36.23 ? 103 NCO A N4 1 HETATM 273 N N5 . NCO E 3 . ? 12.529 -14.716 -5.169 1.00 24.08 ? 103 NCO A N5 1 HETATM 274 N N6 . NCO E 3 . ? 10.207 -16.514 -5.634 1.00 43.92 ? 103 NCO A N6 1 HETATM 275 CO CO . CO F 4 . ? 14.350 0.000 -20.400 0.25 51.84 ? 104 CO A CO 1 HETATM 276 CO CO . NCO G 3 . ? -0.000 -13.649 -20.400 0.50 13.54 3 101 NCO B CO 1 HETATM 277 N N1 . NCO G 3 . ? -1.346 -15.125 -19.892 0.50 11.43 ? 101 NCO B N1 1 HETATM 278 N N4 . NCO G 3 . ? 1.399 -12.259 -20.794 0.50 16.53 ? 101 NCO B N4 1 HETATM 279 N N5 . NCO G 3 . ? 1.325 -15.205 -20.859 0.50 16.63 ? 101 NCO B N5 1 HETATM 280 N N6 . NCO G 3 . ? -1.357 -12.205 -19.895 0.50 7.99 ? 101 NCO B N6 1 HETATM 281 CO CO . NCO H 3 . ? 14.689 -5.416 -3.302 1.00 39.86 3 102 NCO B CO 1 HETATM 282 N N1 . NCO H 3 . ? 16.328 -4.362 -3.714 1.00 38.50 ? 102 NCO B N1 1 HETATM 283 N N2 . NCO H 3 . ? 13.063 -6.426 -2.880 1.00 29.77 ? 102 NCO B N2 1 HETATM 284 NA NA . NA I 5 . ? 14.350 0.000 0.000 0.25 30.42 ? 103 NA B NA 1 HETATM 285 O O . HOH J 6 . ? 16.586 6.313 -15.422 1.00 16.23 ? 201 HOH A O 1 HETATM 286 O O . HOH J 6 . ? 20.851 -15.806 -17.988 1.00 11.54 ? 202 HOH A O 1 HETATM 287 O O . HOH J 6 . ? 14.106 -12.320 -3.967 1.00 39.68 ? 203 HOH A O 1 HETATM 288 O O . HOH J 6 . ? 22.825 -0.483 -14.249 1.00 25.21 ? 204 HOH A O 1 HETATM 289 O O . HOH J 6 . ? 9.251 -17.506 -8.068 1.00 20.58 ? 205 HOH A O 1 HETATM 290 O O . HOH J 6 . ? 21.367 -12.865 -17.973 0.50 23.61 ? 206 HOH A O 1 HETATM 291 O O . HOH J 6 . ? 19.196 -8.226 -8.621 1.00 37.96 ? 207 HOH A O 1 HETATM 292 O O . HOH J 6 . ? 21.051 2.530 -16.323 1.00 24.39 ? 208 HOH A O 1 HETATM 293 O O . HOH J 6 . ? 21.654 -15.243 -20.016 1.00 23.51 ? 209 HOH A O 1 HETATM 294 O O . HOH J 6 . ? 23.543 -17.755 -20.639 1.00 28.30 ? 210 HOH A O 1 HETATM 295 O O . HOH J 6 . ? 24.708 -14.870 -19.441 1.00 18.83 ? 211 HOH A O 1 HETATM 296 O O . HOH J 6 . ? 17.675 -14.671 -9.019 1.00 34.06 ? 212 HOH A O 1 HETATM 297 O O . HOH J 6 . ? 17.042 -10.238 -9.270 1.00 30.14 ? 213 HOH A O 1 HETATM 298 O O . HOH K 6 . ? 9.624 -7.389 -15.400 1.00 15.50 ? 201 HOH B O 1 HETATM 299 O O . HOH K 6 . ? 1.215 -17.695 -19.625 1.00 25.59 ? 202 HOH B O 1 HETATM 300 O O . HOH K 6 . ? 1.215 -4.224 -14.064 1.00 37.08 ? 203 HOH B O 1 HETATM 301 O O . HOH K 6 . ? 2.354 -7.894 -13.002 1.00 28.77 ? 204 HOH B O 1 HETATM 302 O O . HOH K 6 . ? 6.242 -6.387 -5.195 1.00 22.41 ? 205 HOH B O 1 HETATM 303 O O . HOH K 6 . ? 7.682 -8.269 -6.998 1.00 23.14 ? 206 HOH B O 1 HETATM 304 O O . HOH K 6 . ? 2.473 -8.972 -19.582 1.00 36.39 ? 207 HOH B O 1 HETATM 305 O O . HOH K 6 . ? 0.225 -7.946 -15.921 1.00 28.68 ? 208 HOH B O 1 HETATM 306 O O . HOH K 6 . ? -0.000 -8.865 -20.400 0.50 31.55 ? 209 HOH B O 1 HETATM 307 O O . HOH K 6 . ? 12.514 -8.313 -4.863 1.00 32.21 ? 210 HOH B O 1 HETATM 308 O O . HOH K 6 . ? 3.872 -7.313 -9.604 1.00 31.29 ? 211 HOH B O 1 HETATM 309 O O . HOH K 6 . ? 8.556 -5.318 -16.752 1.00 26.76 ? 212 HOH B O 1 #