HEADER DNA 07-OCT-14 4RIP TITLE BROMOURACIL SUBSTITUTED STRUCTURE OF INTERCALATION-LOCKED DNA TITLE 2 TETRAPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*AP*CP*(BRU)P*CP*GP*GP*AP*(BRU)P*GP*AP*T)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS BROMOURACIL, HOMODUPLEX, INTERCALATION-LOCKED DNA TETRAPLEX, DNA EXPDTA X-RAY DIFFRACTION AUTHOR S.K.TRIPATHI,D.ZHANG,P.PAUKSTELIS REVDAT 4 28-FEB-24 4RIP 1 LINK REVDAT 3 04-MAR-15 4RIP 1 JRNL REVDAT 2 25-FEB-15 4RIP 1 REMARK REVDAT 1 11-FEB-15 4RIP 0 JRNL AUTH S.TRIPATHI,D.ZHANG,P.J.PAUKSTELIS JRNL TITL AN INTERCALATION-LOCKED PARALLEL-STRANDED DNA TETRAPLEX. JRNL REF NUCLEIC ACIDS RES. V. 43 1937 2015 JRNL REFN ISSN 0305-1048 JRNL PMID 25628357 JRNL DOI 10.1093/NAR/GKV033 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 2422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.1400 - 2.1000 1.00 3610 194 0.2324 0.2385 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 30.03 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.000 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.20780 REMARK 3 B22 (A**2) : 1.20780 REMARK 3 B33 (A**2) : -2.41550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 232 REMARK 3 ANGLE : 1.659 356 REMARK 3 CHIRALITY : 0.098 37 REMARK 3 PLANARITY : 0.004 10 REMARK 3 DIHEDRAL : 39.746 99 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9198 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2699 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 55.484 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 2.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : 0.19600 REMARK 200 R SYM FOR SHELL (I) : 0.19600 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MGCL2, 5% PEG400, 30 MM SODIUM REMARK 280 CACODYLATE, PH 7.4, 8MM COBALT HEXAMINE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.96800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.48400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 110.96800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.48400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 110.96800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 55.48400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 110.96800 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 55.48400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 26.40000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 45.72614 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 39.60000 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 22.86307 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 55.48400 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 -13.20000 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 22.86307 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 55.48400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 115 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 121 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT A 11 O5' C5' C4' O4' C3' O3' C2' REMARK 470 DT A 11 C1' N1 C2 O2 N3 C4 O4 REMARK 470 DT A 11 C5 C7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 125 O HOH A 125 4765 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RIM RELATED DB: PDB REMARK 900 NATIVE STRUCTURE OF INTERCALATION-LOCKED DNA TETRAPLEX DBREF 4RIP A 1 11 PDB 4RIP 4RIP 1 11 SEQRES 1 A 11 DA DC BRU DC DG DG DA BRU DG DA DT MODRES 4RIP BRU A 3 DU MODRES 4RIP BRU A 8 DU HET BRU A 3 20 HET BRU A 8 20 HETNAM BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE FORMUL 1 BRU 2(C9 H12 BR N2 O8 P) FORMUL 2 HOH *25(H2 O) LINK O3' DC A 2 P BRU A 3 1555 1555 1.61 LINK O3' BRU A 3 P DC A 4 1555 1555 1.61 LINK O3' DA A 7 P BRU A 8 1555 1555 1.62 LINK O3' BRU A 8 P DG A 9 1555 1555 1.61 CRYST1 26.400 26.400 166.452 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.037879 0.021869 0.000000 0.00000 SCALE2 0.000000 0.043739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006008 0.00000 ATOM 1 O5' DA A 1 9.677 16.544 22.443 1.00 20.70 O ATOM 2 C5' DA A 1 9.474 16.733 21.056 1.00 21.55 C ATOM 3 C4' DA A 1 8.343 17.714 20.834 1.00 21.48 C ATOM 4 O4' DA A 1 8.834 19.076 21.002 1.00 19.32 O ATOM 5 C3' DA A 1 7.731 17.669 19.437 1.00 24.38 C ATOM 6 O3' DA A 1 6.373 18.042 19.539 1.00 26.14 O ATOM 7 C2' DA A 1 8.490 18.775 18.719 1.00 23.50 C ATOM 8 C1' DA A 1 8.553 19.823 19.836 1.00 21.09 C ATOM 9 N9 DA A 1 9.629 20.787 19.594 1.00 20.57 N ATOM 10 C8 DA A 1 10.980 20.548 19.563 1.00 19.28 C ATOM 11 N7 DA A 1 11.701 21.616 19.291 1.00 19.38 N ATOM 12 C5 DA A 1 10.755 22.627 19.130 1.00 19.75 C ATOM 13 C6 DA A 1 10.858 24.013 18.825 1.00 20.36 C ATOM 14 N6 DA A 1 12.010 24.676 18.613 1.00 19.79 N ATOM 15 N1 DA A 1 9.715 24.721 18.737 1.00 20.75 N ATOM 16 C2 DA A 1 8.548 24.084 18.935 1.00 19.77 C ATOM 17 N3 DA A 1 8.326 22.798 19.227 1.00 18.69 N ATOM 18 C4 DA A 1 9.479 22.124 19.309 1.00 19.06 C ATOM 19 P DC A 2 5.211 16.948 19.334 1.00 27.36 P ATOM 20 OP1 DC A 2 5.719 15.900 18.404 1.00 28.99 O ATOM 21 OP2 DC A 2 3.938 17.681 19.045 1.00 27.63 O ATOM 22 O5' DC A 2 5.120 16.228 20.766 1.00 26.06 O ATOM 23 C5' DC A 2 4.697 16.923 21.933 1.00 26.52 C ATOM 24 C4' DC A 2 4.403 15.847 22.964 1.00 27.98 C ATOM 25 O4' DC A 2 3.170 15.181 22.608 1.00 28.73 O ATOM 26 C3' DC A 2 5.441 14.720 23.067 1.00 26.70 C ATOM 27 O3' DC A 2 5.773 14.550 24.441 1.00 26.57 O ATOM 28 C2' DC A 2 4.774 13.476 22.482 1.00 25.45 C ATOM 29 C1' DC A 2 3.333 13.793 22.823 1.00 26.26 C ATOM 30 N1 DC A 2 2.326 13.129 21.962 1.00 27.29 N ATOM 31 C2 DC A 2 1.128 12.785 22.600 1.00 25.76 C ATOM 32 O2 DC A 2 1.010 13.049 23.810 1.00 25.20 O ATOM 33 N3 DC A 2 0.153 12.183 21.877 1.00 26.23 N ATOM 34 C4 DC A 2 0.361 11.940 20.575 1.00 25.38 C ATOM 35 N4 DC A 2 -0.642 11.336 19.919 1.00 26.21 N ATOM 36 C5 DC A 2 1.576 12.290 19.900 1.00 23.09 C ATOM 37 C6 DC A 2 2.535 12.886 20.625 1.00 24.82 C HETATM 38 N1 BRU A 3 10.982 13.334 22.909 1.00 24.56 N HETATM 39 C2 BRU A 3 12.029 13.796 22.083 1.00 23.13 C HETATM 40 N3 BRU A 3 11.848 13.986 20.763 1.00 25.43 N HETATM 41 C4 BRU A 3 10.658 13.731 20.187 1.00 24.76 C HETATM 42 C5 BRU A 3 9.545 13.231 21.041 1.00 25.45 C HETATM 43 C6 BRU A 3 9.770 13.049 22.403 1.00 24.14 C HETATM 44 O2 BRU A 3 13.145 14.038 22.603 1.00 23.93 O HETATM 45 O4 BRU A 3 10.472 13.910 18.950 1.00 22.59 O HETATM 46 BR BRU A 3 7.840 12.874 20.278 0.75 31.36 BR HETATM 47 C1' BRU A 3 11.224 13.112 24.340 1.00 24.11 C HETATM 48 C2' BRU A 3 11.129 14.385 25.174 1.00 23.17 C HETATM 49 C3' BRU A 3 10.533 13.859 26.468 1.00 25.62 C HETATM 50 C4' BRU A 3 9.710 12.641 26.084 1.00 25.78 C HETATM 51 O3' BRU A 3 11.612 13.303 27.225 1.00 27.11 O HETATM 52 O4' BRU A 3 10.197 12.226 24.810 1.00 23.50 O HETATM 53 C5' BRU A 3 8.235 12.964 25.952 1.00 25.13 C HETATM 54 O5' BRU A 3 8.184 13.961 24.932 1.00 27.59 O HETATM 55 P BRU A 3 7.135 15.185 25.018 1.00 26.65 P HETATM 56 OP1 BRU A 3 6.939 15.491 26.491 1.00 28.26 O HETATM 57 OP2 BRU A 3 7.585 16.282 24.060 1.00 25.61 O ATOM 58 P DC A 4 11.942 13.830 28.708 1.00 25.99 P ATOM 59 OP1 DC A 4 12.862 12.839 29.335 1.00 25.69 O ATOM 60 OP2 DC A 4 10.661 14.235 29.364 1.00 25.68 O ATOM 61 O5' DC A 4 12.764 15.178 28.451 1.00 22.62 O ATOM 62 C5' DC A 4 13.923 15.109 27.619 1.00 22.03 C ATOM 63 C4' DC A 4 14.923 16.126 28.133 1.00 21.58 C ATOM 64 O4' DC A 4 14.356 17.457 27.968 1.00 20.22 O ATOM 65 C3' DC A 4 15.295 16.024 29.610 1.00 21.20 C ATOM 66 O3' DC A 4 16.669 16.358 29.669 1.00 23.14 O ATOM 67 C2' DC A 4 14.434 17.110 30.251 1.00 19.60 C ATOM 68 C1' DC A 4 14.519 18.189 29.172 1.00 19.21 C ATOM 69 N1 DC A 4 13.436 19.217 29.219 1.00 18.03 N ATOM 70 C2 DC A 4 13.766 20.568 29.287 1.00 17.42 C ATOM 71 O2 DC A 4 14.955 20.922 29.316 1.00 18.20 O ATOM 72 N3 DC A 4 12.763 21.474 29.323 1.00 19.38 N ATOM 73 C4 DC A 4 11.478 21.091 29.300 1.00 19.80 C ATOM 74 N4 DC A 4 10.547 22.067 29.353 1.00 17.47 N ATOM 75 C5 DC A 4 11.115 19.705 29.237 1.00 18.15 C ATOM 76 C6 DC A 4 12.120 18.821 29.195 1.00 18.65 C ATOM 77 P DG A 5 17.557 15.963 30.951 1.00 21.70 P ATOM 78 OP1 DG A 5 18.992 16.008 30.546 1.00 22.69 O ATOM 79 OP2 DG A 5 16.989 14.717 31.539 1.00 23.85 O ATOM 80 O5' DG A 5 17.289 17.173 31.965 1.00 21.68 O ATOM 81 C5' DG A 5 17.660 18.524 31.612 1.00 19.61 C ATOM 82 C4' DG A 5 17.137 19.459 32.688 1.00 19.76 C ATOM 83 O4' DG A 5 15.708 19.642 32.506 1.00 20.35 O ATOM 84 C3' DG A 5 17.287 18.970 34.126 1.00 20.35 C ATOM 85 O3' DG A 5 17.581 20.112 34.933 1.00 22.38 O ATOM 86 C2' DG A 5 15.905 18.388 34.444 1.00 19.95 C ATOM 87 C1' DG A 5 15.037 19.423 33.736 1.00 19.95 C ATOM 88 N9 DG A 5 13.667 18.991 33.426 1.00 20.12 N ATOM 89 C8 DG A 5 13.186 17.698 33.397 1.00 18.48 C ATOM 90 N7 DG A 5 11.915 17.621 33.076 1.00 17.93 N ATOM 91 C5 DG A 5 11.525 18.943 32.879 1.00 18.78 C ATOM 92 C6 DG A 5 10.267 19.483 32.510 1.00 19.10 C ATOM 93 O6 DG A 5 9.207 18.868 32.284 1.00 19.12 O ATOM 94 N1 DG A 5 10.300 20.882 32.408 1.00 17.85 N ATOM 95 C2 DG A 5 11.426 21.652 32.636 1.00 18.47 C ATOM 96 N2 DG A 5 11.295 22.986 32.501 1.00 18.60 N ATOM 97 N3 DG A 5 12.614 21.152 32.977 1.00 19.19 N ATOM 98 C4 DG A 5 12.592 19.800 33.082 1.00 18.72 C ATOM 99 P DG A 6 18.249 19.930 36.395 1.00 22.00 P ATOM 100 OP1 DG A 6 18.487 21.285 36.958 1.00 21.28 O ATOM 101 OP2 DG A 6 19.364 18.950 36.276 1.00 20.37 O ATOM 102 O5' DG A 6 17.084 19.230 37.244 1.00 24.59 O ATOM 103 C5' DG A 6 17.354 18.411 38.365 1.00 23.74 C ATOM 104 C4' DG A 6 16.851 19.137 39.602 1.00 27.01 C ATOM 105 O4' DG A 6 15.449 19.485 39.458 1.00 26.83 O ATOM 106 C3' DG A 6 16.936 18.315 40.876 1.00 28.44 C ATOM 107 O3' DG A 6 17.420 19.165 41.901 1.00 35.28 O ATOM 108 C2' DG A 6 15.493 17.872 41.122 1.00 26.31 C ATOM 109 C1' DG A 6 14.748 19.107 40.631 1.00 25.84 C ATOM 110 N9 DG A 6 13.346 18.851 40.291 1.00 23.90 N ATOM 111 C8 DG A 6 12.758 17.609 40.175 1.00 22.28 C ATOM 112 N7 DG A 6 11.490 17.672 39.862 1.00 22.67 N ATOM 113 C5 DG A 6 11.218 19.044 39.768 1.00 22.87 C ATOM 114 C6 DG A 6 10.015 19.733 39.455 1.00 22.25 C ATOM 115 O6 DG A 6 8.893 19.271 39.187 1.00 22.32 O ATOM 116 N1 DG A 6 10.188 21.115 39.463 1.00 22.92 N ATOM 117 C2 DG A 6 11.369 21.764 39.742 1.00 22.93 C ATOM 118 N2 DG A 6 11.332 23.114 39.702 1.00 24.47 N ATOM 119 N3 DG A 6 12.502 21.133 40.038 1.00 21.73 N ATOM 120 C4 DG A 6 12.354 19.783 40.032 1.00 22.82 C ATOM 121 P DA A 7 18.502 18.619 42.967 1.00 38.11 P ATOM 122 OP1 DA A 7 19.336 17.583 42.283 1.00 32.99 O ATOM 123 OP2 DA A 7 17.774 18.249 44.210 1.00 36.38 O ATOM 124 O5' DA A 7 19.369 19.925 43.314 1.00 36.07 O ATOM 125 C5' DA A 7 20.352 20.377 42.389 1.00 34.56 C ATOM 126 C4' DA A 7 20.217 21.873 42.237 1.00 35.20 C ATOM 127 O4' DA A 7 18.879 22.166 41.789 1.00 33.00 O ATOM 128 C3' DA A 7 20.372 22.719 43.498 1.00 38.35 C ATOM 129 O3' DA A 7 21.782 22.912 43.666 1.00 43.22 O ATOM 130 C2' DA A 7 19.682 24.012 43.062 1.00 37.17 C ATOM 131 C1' DA A 7 18.631 23.530 42.076 1.00 31.76 C ATOM 132 N9 DA A 7 17.253 23.666 42.542 1.00 31.51 N ATOM 133 C8 DA A 7 16.340 22.678 42.819 1.00 30.91 C ATOM 134 N7 DA A 7 15.166 23.139 43.198 1.00 29.95 N ATOM 135 C5 DA A 7 15.333 24.517 43.161 1.00 28.29 C ATOM 136 C6 DA A 7 14.470 25.583 43.447 1.00 28.18 C ATOM 137 N6 DA A 7 13.203 25.398 43.843 1.00 29.06 N ATOM 138 N1 DA A 7 14.952 26.838 43.307 1.00 27.35 N ATOM 139 C2 DA A 7 16.218 27.010 42.907 1.00 26.01 C ATOM 140 N3 DA A 7 17.123 26.083 42.608 1.00 29.04 N ATOM 141 C4 DA A 7 16.607 24.857 42.760 1.00 28.49 C HETATM 142 N1 BRU A 8 17.034 24.656 46.675 1.00 37.45 N HETATM 143 C2 BRU A 8 15.641 24.882 46.699 1.00 34.88 C HETATM 144 N3 BRU A 8 14.773 23.867 46.713 1.00 35.32 N HETATM 145 C4 BRU A 8 15.217 22.604 46.701 1.00 36.65 C HETATM 146 C5 BRU A 8 16.681 22.348 46.677 1.00 37.05 C HETATM 147 C6 BRU A 8 17.552 23.422 46.666 1.00 38.04 C HETATM 148 O2 BRU A 8 15.214 26.059 46.707 1.00 35.12 O HETATM 149 O4 BRU A 8 14.408 21.645 46.711 1.00 37.37 O HETATM 150 BR BRU A 8 17.351 20.586 46.666 0.50 39.26 BR HETATM 151 C1' BRU A 8 17.916 25.819 46.667 1.00 39.17 C HETATM 152 C2' BRU A 8 18.745 25.893 47.945 1.00 42.58 C HETATM 153 C3' BRU A 8 19.896 26.778 47.505 1.00 44.30 C HETATM 154 C4' BRU A 8 19.999 26.563 45.999 1.00 41.47 C HETATM 155 O3' BRU A 8 19.539 28.153 47.685 1.00 47.73 O HETATM 156 O4' BRU A 8 18.879 25.755 45.613 1.00 37.92 O HETATM 157 C5' BRU A 8 21.303 25.900 45.592 1.00 39.85 C HETATM 158 O5' BRU A 8 21.144 24.483 45.582 1.00 40.02 O HETATM 159 P BRU A 8 22.377 23.624 44.996 1.00 49.42 P HETATM 160 OP1 BRU A 8 23.437 24.624 44.548 1.00 49.01 O HETATM 161 OP2 BRU A 8 22.700 22.539 46.015 1.00 45.27 O ATOM 162 P DG A 9 19.604 28.833 49.144 1.00 53.46 P ATOM 163 OP1 DG A 9 19.405 30.297 48.970 1.00 48.50 O ATOM 164 OP2 DG A 9 20.820 28.317 49.832 1.00 48.56 O ATOM 165 O5' DG A 9 18.314 28.240 49.901 1.00 45.42 O ATOM 166 C5' DG A 9 16.998 28.514 49.395 1.00 44.57 C ATOM 167 C4' DG A 9 15.946 27.708 50.141 1.00 45.21 C ATOM 168 O4' DG A 9 16.084 26.301 49.848 1.00 44.09 O ATOM 169 C3' DG A 9 16.012 27.829 51.664 1.00 49.00 C ATOM 170 O3' DG A 9 14.734 28.129 52.195 1.00 51.11 O ATOM 171 C2' DG A 9 16.499 26.484 52.171 1.00 45.18 C ATOM 172 C1' DG A 9 16.019 25.574 51.055 1.00 45.92 C ATOM 173 N9 DG A 9 16.907 24.438 50.938 1.00 46.18 N ATOM 174 C8 DG A 9 18.273 24.426 51.134 1.00 47.87 C ATOM 175 N7 DG A 9 18.802 23.242 50.964 1.00 48.31 N ATOM 176 C5 DG A 9 17.708 22.435 50.640 1.00 46.48 C ATOM 177 C6 DG A 9 17.647 21.053 50.343 1.00 48.06 C ATOM 178 O6 DG A 9 18.595 20.243 50.313 1.00 51.27 O ATOM 179 N1 DG A 9 16.330 20.642 50.067 1.00 45.79 N ATOM 180 C2 DG A 9 15.209 21.456 50.074 1.00 42.55 C ATOM 181 N2 DG A 9 14.025 20.878 49.788 1.00 40.13 N ATOM 182 N3 DG A 9 15.259 22.754 50.350 1.00 43.09 N ATOM 183 C4 DG A 9 16.531 23.159 50.619 1.00 44.68 C ATOM 184 P DA A 10 14.523 29.481 53.036 1.00 57.52 P ATOM 185 OP1 DA A 10 15.557 30.462 52.596 1.00 51.66 O ATOM 186 OP2 DA A 10 14.408 29.107 54.471 1.00 53.50 O ATOM 187 O5' DA A 10 13.129 30.038 52.499 1.00 53.53 O ATOM 188 C5' DA A 10 11.992 29.775 53.264 1.00 53.87 C ATOM 189 C4' DA A 10 10.835 29.572 52.327 1.00 53.06 C ATOM 190 O4' DA A 10 10.917 28.233 51.792 1.00 48.11 O ATOM 191 C3' DA A 10 9.496 29.663 53.034 1.00 54.03 C ATOM 192 O3' DA A 10 8.514 30.118 52.114 1.00 55.74 O ATOM 193 C2' DA A 10 9.274 28.235 53.526 1.00 51.80 C ATOM 194 C1' DA A 10 9.932 27.430 52.413 1.00 47.93 C ATOM 195 N9 DA A 10 10.585 26.197 52.838 1.00 48.81 N ATOM 196 C8 DA A 10 11.926 25.909 52.810 1.00 47.93 C ATOM 197 N7 DA A 10 12.205 24.692 53.233 1.00 45.83 N ATOM 198 C5 DA A 10 10.967 24.147 53.559 1.00 45.24 C ATOM 199 C6 DA A 10 10.556 22.889 54.067 1.00 45.76 C ATOM 200 N6 DA A 10 11.392 21.886 54.355 1.00 46.09 N ATOM 201 N1 DA A 10 9.232 22.685 54.274 1.00 47.02 N ATOM 202 C2 DA A 10 8.379 23.681 53.991 1.00 48.42 C ATOM 203 N3 DA A 10 8.641 24.903 53.510 1.00 48.56 N ATOM 204 C4 DA A 10 9.961 25.069 53.316 1.00 47.18 C ATOM 205 P DT A 11 7.768 31.516 52.367 1.00 61.40 P ATOM 206 OP1 DT A 11 8.786 32.505 52.840 1.00 53.67 O ATOM 207 OP2 DT A 11 6.549 31.239 53.173 1.00 60.16 O TER 208 DT A 11 HETATM 209 O HOH A 101 12.110 17.705 26.115 1.00 17.34 O HETATM 210 O HOH A 102 10.946 18.806 23.740 1.00 17.30 O HETATM 211 O HOH A 103 6.885 19.550 31.140 1.00 18.84 O HETATM 212 O HOH A 104 18.000 22.549 38.935 1.00 24.64 O HETATM 213 O HOH A 105 8.018 20.739 28.857 1.00 20.40 O HETATM 214 O HOH A 106 21.895 15.782 31.282 1.00 26.31 O HETATM 215 O HOH A 107 8.437 27.114 17.873 1.00 21.89 O HETATM 216 O HOH A 108 19.416 14.877 28.423 1.00 24.94 O HETATM 217 O HOH A 109 4.644 13.125 18.495 1.00 28.25 O HETATM 218 O HOH A 110 9.671 16.500 30.174 1.00 26.13 O HETATM 219 O HOH A 111 15.380 18.687 48.281 1.00 43.12 O HETATM 220 O HOH A 112 0.880 16.128 21.639 1.00 32.28 O HETATM 221 O HOH A 113 7.635 15.674 16.343 1.00 32.96 O HETATM 222 O HOH A 114 10.306 15.739 16.755 1.00 31.10 O HETATM 223 O HOH A 115 6.600 11.431 17.515 0.50 29.96 O HETATM 224 O HOH A 116 8.141 29.290 19.559 1.00 27.10 O HETATM 225 O HOH A 117 10.017 16.902 27.660 1.00 25.47 O HETATM 226 O HOH A 118 22.657 13.770 31.720 1.00 32.11 O HETATM 227 O HOH A 119 5.955 16.839 30.470 1.00 35.01 O HETATM 228 O HOH A 120 19.179 16.287 36.272 1.00 27.84 O HETATM 229 O HOH A 121 15.400 26.673 55.484 0.50 48.25 O HETATM 230 O HOH A 122 15.204 14.668 33.374 1.00 26.49 O HETATM 231 O HOH A 123 15.206 18.915 44.748 1.00 36.85 O HETATM 232 O HOH A 124 8.875 12.844 29.550 1.00 35.30 O HETATM 233 O HOH A 125 20.289 12.278 29.283 1.00 34.03 O CONECT 27 55 CONECT 38 39 43 47 CONECT 39 38 40 44 CONECT 40 39 41 CONECT 41 40 42 45 CONECT 42 41 43 46 CONECT 43 38 42 CONECT 44 39 CONECT 45 41 CONECT 46 42 CONECT 47 38 48 52 CONECT 48 47 49 CONECT 49 48 50 51 CONECT 50 49 52 53 CONECT 51 49 58 CONECT 52 47 50 CONECT 53 50 54 CONECT 54 53 55 CONECT 55 27 54 56 57 CONECT 56 55 CONECT 57 55 CONECT 58 51 CONECT 129 159 CONECT 142 143 147 151 CONECT 143 142 144 148 CONECT 144 143 145 CONECT 145 144 146 149 CONECT 146 145 147 150 CONECT 147 142 146 CONECT 148 143 CONECT 149 145 CONECT 150 146 CONECT 151 142 152 156 CONECT 152 151 153 CONECT 153 152 154 155 CONECT 154 153 156 157 CONECT 155 153 162 CONECT 156 151 154 CONECT 157 154 158 CONECT 158 157 159 CONECT 159 129 158 160 161 CONECT 160 159 CONECT 161 159 CONECT 162 155 MASTER 270 0 2 0 0 0 0 6 232 1 44 1 END