HEADER DNA 25-NOV-15 5EYQ TITLE RACEMIC CRYSTAL STRUCTURES OF PRIBNOW BOX CONSENSUS PROMOTER SEQUENCE TITLE 2 (PNNA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRIBNOW BOX TEMPLATE STRAND; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COMPLEMENTARY STRAND; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630 KEYWDS PRIBNOW BOX CONSENSUS SEQUENCE, -10 ELEMENT, TRANSCRIPTION KEYWDS 2 INITIATION, B-DNA DOUBLE HELIX, DNA EXPDTA X-RAY DIFFRACTION AUTHOR P.K.MANDAL,G.W.COLLIE,B.KAUFFMANN,S.C.SRIVASTAVA,I.HUC REVDAT 6 10-JAN-24 5EYQ 1 LINK REVDAT 5 21-NOV-18 5EYQ 1 LINK REVDAT 4 29-NOV-17 5EYQ 1 REMARK REVDAT 3 07-SEP-16 5EYQ 1 REVDAT 2 20-JUL-16 5EYQ 1 JRNL REVDAT 1 18-MAY-16 5EYQ 0 JRNL AUTH P.K.MANDAL,G.W.COLLIE,S.C.SRIVASTAVA,B.KAUFFMANN,I.HUC JRNL TITL STRUCTURE ELUCIDATION OF THE PRIBNOW BOX CONSENSUS PROMOTER JRNL TITL 2 SEQUENCE BY RACEMIC DNA CRYSTALLOGRAPHY. JRNL REF NUCLEIC ACIDS RES. V. 44 5936 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27137886 JRNL DOI 10.1093/NAR/GKW367 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.K.MANDAL,G.W.COLLIE,B.KAUFFMANN,I.HUC REMARK 1 TITL RACEMIC DNA CRYSTALLOGRAPHY REMARK 1 REF ANGEW. CHEM. INT. ED. V. 53 14424 2014 REMARK 1 REFN ESSN 1521-3773 REMARK 1 PMID 25358289 REMARK 1 DOI 10.1002/ANIE.201409014 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 2678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.276 REMARK 3 R VALUE (WORKING SET) : 0.272 REMARK 3 FREE R VALUE : 0.357 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 147 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 161 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.5080 REMARK 3 BIN FREE R VALUE SET COUNT : 7 REMARK 3 BIN FREE R VALUE : 0.7150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 486 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.18000 REMARK 3 B22 (A**2) : -6.83000 REMARK 3 B33 (A**2) : 4.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.566 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.368 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.288 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.534 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 544 ; 0.011 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 272 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 836 ; 1.668 ; 1.170 REMARK 3 BOND ANGLES OTHERS (DEGREES): 644 ; 1.600 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 72 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 284 ; 0.019 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 116 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 544 ; 4.509 ; 3.833 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 543 ; 4.513 ; 3.835 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 837 ; 7.187 ; 5.799 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 600 ; 8.307 ;32.781 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 596 ; 8.197 ;32.612 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5EYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-NOV-15. REMARK 100 THE DEPOSITION ID IS D_1000215722. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 150 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 34.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.6 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.17500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1BNA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RACEMIC DNA SOLUTION*, SODIUM REMARK 280 CACODYLATE, MAGNESIUM CHLORIDE, SODIUM CHLORIDE, SPERMINE REMARK 280 TETRAHYDROCHLORIDE, MPD *FOR CRYSTALLIZATION, WE USED FOUR REMARK 280 STRANDS (1) D(CGCTATAATGCG) WITH L-SUGARS (2) D(CGCATTATAGCG) REMARK 280 WITH L-SUGARS AND (3) D(CGCTATAATGCG) WITH D-SUGARS (4) REMARK 280 D(CGCATTATAGCG) WITH D-SUGARS ENANTIO-PURE L-DNA SOLUTION REMARK 280 (STRANDS 1,2) AND D-DNA SOLUTION (STRANDS 3,4) WERE PREPARED REMARK 280 FIRST WITH DENATURATION FOLLOWED BY SLOW ANNEALING PROCESS TO REMARK 280 ENSURE PROPER FOLDING OF THE DUPLEX FORMED BETWEEN THE NON-SELF REMARK 280 COMPLEMENTARY STRANDS. AFTER ANNEALING, THE ENANTIOPURE REMARK 280 SOLUTIONS WERE MIXED IN EQUIMOLAR RATIO AND THIS RACEMIC MIXTURE REMARK 280 WAS USED FOR CRYSTALLIZATION., PH 7.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P n n a REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 4555 X,-Y+1/2,-Z+1/2 REMARK 290 5555 -X,-Y,-Z REMARK 290 6555 X+1/2,Y,-Z REMARK 290 7555 X+1/2,-Y+1/2,Z+1/2 REMARK 290 8555 -X,Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 14.45250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 14.45250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.22700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 17.10550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.22700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 17.10550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 14.45250 REMARK 290 SMTRY2 6 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 14.45250 REMARK 290 SMTRY2 7 0.000000 -1.000000 0.000000 34.22700 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 17.10550 REMARK 290 SMTRY1 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 1.000000 0.000000 34.22700 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 17.10550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 34.22700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 85.52750 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA B 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 102 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP1 DC B 3 O HOH B 201 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG A 12 O5' - P - OP1 ANGL. DEV. = -5.9 DEGREES REMARK 500 DA B 4 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 101 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC B 11 O3' REMARK 620 2 DC B 11 O3' 0.0 REMARK 620 3 DG B 12 OP1 60.8 60.8 REMARK 620 4 DG B 12 O5' 61.1 61.1 69.5 REMARK 620 5 DG B 12 OP1 60.8 60.8 0.0 69.5 REMARK 620 6 DG B 12 O5' 61.1 61.1 69.5 0.0 69.5 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ET9 RELATED DB: PDB REMARK 900 5ET9 AND 5EWB COMPRISE OF PRIBNOW BOX CONSENSUS SEQUENCE REMARK 900 CRYSTALLIZED USING RACEMIC DNA CRYSTALLOGRAPHY REMARK 900 RELATED ID: 5EWB RELATED DB: PDB REMARK 900 5ET9 AND 5EWB COMPRISE OF PRIBNOW BOX CONSENSUS SEQUENCE REMARK 900 CRYSTALLIZED USING RACEMIC DNA CRYSTALLOGRAPHY DBREF 5EYQ A 1 12 PDB 5EYQ 5EYQ 1 12 DBREF 5EYQ B 1 12 PDB 5EYQ 5EYQ 1 12 SEQRES 1 A 12 DC DG DC DT DA DT DA DA DT DG DC DG SEQRES 1 B 12 DC DG DC DA DT DT DA DT DA DG DC DG HET NA B 101 1 HETNAM NA SODIUM ION FORMUL 3 NA NA 1+ FORMUL 4 HOH *19(H2 O) LINK O3' DC B 11 NA NA B 101 1555 1555 2.69 LINK O3' DC B 11 NA NA B 101 1555 2565 2.68 LINK OP1 DG B 12 NA NA B 101 1555 1555 2.13 LINK O5' DG B 12 NA NA B 101 1555 1555 2.16 LINK OP1 DG B 12 NA NA B 101 1555 2565 2.13 LINK O5' DG B 12 NA NA B 101 1555 2565 2.16 CRYST1 28.905 68.454 34.211 90.00 90.00 90.00 P n n a 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034596 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029230 0.00000 ATOM 1 O5' DC A 1 13.038 1.106 29.989 0.50 38.71 O ATOM 2 C5' DC A 1 12.172 0.172 29.353 0.50 32.91 C ATOM 3 C4' DC A 1 10.787 0.308 29.925 0.50 28.41 C ATOM 4 O4' DC A 1 10.839 -0.085 31.294 0.50 28.35 O ATOM 5 C3' DC A 1 10.195 1.708 29.923 0.50 27.48 C ATOM 6 O3' DC A 1 8.799 1.548 29.726 0.50 27.38 O ATOM 7 C2' DC A 1 10.494 2.216 31.317 0.50 26.89 C ATOM 8 C1' DC A 1 10.367 0.958 32.136 0.50 25.44 C ATOM 9 N1 DC A 1 11.224 0.974 33.291 0.50 25.39 N ATOM 10 C2 DC A 1 10.848 0.306 34.481 0.50 23.91 C ATOM 11 O2 DC A 1 9.733 -0.198 34.557 0.50 29.75 O ATOM 12 N3 DC A 1 11.696 0.283 35.526 0.50 21.18 N ATOM 13 C4 DC A 1 12.871 0.906 35.439 0.50 23.17 C ATOM 14 N4 DC A 1 13.678 0.857 36.492 0.50 23.52 N ATOM 15 C5 DC A 1 13.291 1.568 34.241 0.50 29.79 C ATOM 16 C6 DC A 1 12.453 1.554 33.190 0.50 23.81 C ATOM 17 P DG A 2 7.933 2.720 29.233 0.50 29.89 P ATOM 18 OP1 DG A 2 6.935 2.142 28.326 0.50 31.55 O ATOM 19 OP2 DG A 2 8.788 3.797 28.840 0.50 31.00 O ATOM 20 O5' DG A 2 7.141 3.149 30.511 0.50 26.25 O ATOM 21 C5' DG A 2 6.424 2.100 31.150 0.50 27.08 C ATOM 22 C4' DG A 2 6.159 2.506 32.570 0.50 25.85 C ATOM 23 O4' DG A 2 7.393 2.466 33.304 0.50 24.53 O ATOM 24 C3' DG A 2 5.643 3.943 32.680 0.50 26.37 C ATOM 25 O3' DG A 2 4.288 3.860 33.143 0.50 30.66 O ATOM 26 C2' DG A 2 6.606 4.621 33.636 0.50 27.76 C ATOM 27 C1' DG A 2 7.268 3.440 34.363 0.50 30.57 C ATOM 28 N9 DG A 2 8.602 3.698 34.948 0.50 25.10 N ATOM 29 C8 DG A 2 9.604 4.367 34.296 0.50 29.69 C ATOM 30 N7 DG A 2 10.707 4.435 34.985 0.50 23.97 N ATOM 31 C5 DG A 2 10.451 3.686 36.107 0.50 20.35 C ATOM 32 C6 DG A 2 11.270 3.419 37.199 0.50 19.89 C ATOM 33 O6 DG A 2 12.444 3.754 37.374 0.50 20.99 O ATOM 34 N1 DG A 2 10.601 2.698 38.167 0.50 17.79 N ATOM 35 C2 DG A 2 9.292 2.324 38.099 0.50 19.79 C ATOM 36 N2 DG A 2 8.842 1.604 39.118 0.50 22.43 N ATOM 37 N3 DG A 2 8.517 2.538 37.058 0.50 20.90 N ATOM 38 C4 DG A 2 9.148 3.244 36.115 0.50 20.71 C ATOM 39 P DC A 3 3.390 5.170 33.433 0.50 33.61 P ATOM 40 OP1 DC A 3 2.022 4.842 32.957 0.50 43.08 O ATOM 41 OP2 DC A 3 4.118 6.397 32.938 0.50 36.04 O ATOM 42 O5' DC A 3 3.377 5.307 35.040 0.50 28.82 O ATOM 43 C5' DC A 3 3.368 4.182 35.886 0.50 26.03 C ATOM 44 C4' DC A 3 4.025 4.460 37.215 0.50 27.93 C ATOM 45 O4' DC A 3 5.459 4.590 37.097 0.50 26.20 O ATOM 46 C3' DC A 3 3.539 5.692 37.982 0.50 29.38 C ATOM 47 O3' DC A 3 2.839 5.306 39.176 0.50 34.49 O ATOM 48 C2' DC A 3 4.822 6.405 38.377 0.50 28.69 C ATOM 49 C1' DC A 3 5.890 5.346 38.200 0.50 26.77 C ATOM 50 N1 DC A 3 7.233 5.844 37.904 0.50 23.79 N ATOM 51 C2 DC A 3 8.238 5.635 38.832 0.50 25.08 C ATOM 52 O2 DC A 3 7.961 5.053 39.891 0.50 27.96 O ATOM 53 N3 DC A 3 9.496 6.031 38.544 0.50 23.37 N ATOM 54 C4 DC A 3 9.751 6.649 37.393 0.50 22.54 C ATOM 55 N4 DC A 3 11.006 7.030 37.148 0.50 21.13 N ATOM 56 C5 DC A 3 8.730 6.918 36.448 0.50 22.48 C ATOM 57 C6 DC A 3 7.496 6.508 36.743 0.50 23.94 C ATOM 58 P DT A 4 1.984 6.371 40.087 0.50 36.23 P ATOM 59 OP1 DT A 4 0.952 5.591 40.750 0.50 38.37 O ATOM 60 OP2 DT A 4 1.613 7.499 39.257 0.50 36.81 O ATOM 61 O5' DT A 4 3.022 6.796 41.203 0.50 34.56 O ATOM 62 C5' DT A 4 3.547 5.722 41.982 0.50 38.48 C ATOM 63 C4' DT A 4 4.301 6.222 43.184 0.50 38.75 C ATOM 64 O4' DT A 4 5.697 6.400 42.860 0.50 33.92 O ATOM 65 C3' DT A 4 3.767 7.552 43.703 0.50 45.02 C ATOM 66 O3' DT A 4 3.462 7.394 45.088 0.50 55.44 O ATOM 67 C2' DT A 4 4.877 8.544 43.433 0.50 41.98 C ATOM 68 C1' DT A 4 6.110 7.719 43.077 0.50 36.43 C ATOM 69 N1 DT A 4 6.764 8.206 41.859 0.50 30.81 N ATOM 70 C2 DT A 4 8.121 8.258 41.887 0.50 28.67 C ATOM 71 O2 DT A 4 8.771 7.798 42.809 0.50 32.47 O ATOM 72 N3 DT A 4 8.701 8.782 40.758 0.50 26.52 N ATOM 73 C4 DT A 4 8.058 9.279 39.646 0.50 27.20 C ATOM 74 O4 DT A 4 8.710 9.725 38.704 0.50 28.89 O ATOM 75 C5 DT A 4 6.622 9.256 39.712 0.50 30.85 C ATOM 76 C7 DT A 4 5.833 9.780 38.554 0.50 31.03 C ATOM 77 C6 DT A 4 6.052 8.739 40.808 0.50 32.79 C ATOM 78 P DA A 5 2.962 8.623 45.982 0.50 53.97 P ATOM 79 OP1 DA A 5 1.780 8.151 46.730 0.50 57.51 O ATOM 80 OP2 DA A 5 2.847 9.862 45.151 0.50 44.38 O ATOM 81 O5' DA A 5 4.161 8.727 47.015 0.50 46.32 O ATOM 82 C5' DA A 5 5.135 7.682 47.096 0.50 45.10 C ATOM 83 C4' DA A 5 6.427 8.309 47.555 0.50 45.45 C ATOM 84 O4' DA A 5 7.201 8.692 46.387 0.50 46.57 O ATOM 85 C3' DA A 5 6.167 9.610 48.310 0.50 47.16 C ATOM 86 O3' DA A 5 7.208 9.905 49.247 0.50 55.90 O ATOM 87 C2' DA A 5 6.199 10.635 47.200 0.50 44.38 C ATOM 88 C1' DA A 5 7.385 10.095 46.425 0.50 43.63 C ATOM 89 N9 DA A 5 7.554 10.611 45.062 0.50 36.14 N ATOM 90 C8 DA A 5 6.611 11.033 44.154 0.50 35.01 C ATOM 91 N7 DA A 5 7.123 11.571 43.071 0.50 32.31 N ATOM 92 C5 DA A 5 8.490 11.540 43.302 0.50 28.79 C ATOM 93 C6 DA A 5 9.580 11.928 42.522 0.50 25.78 C ATOM 94 N6 DA A 5 9.464 12.479 41.317 0.50 26.13 N ATOM 95 N1 DA A 5 10.812 11.774 43.045 0.50 28.95 N ATOM 96 C2 DA A 5 10.931 11.199 44.254 0.50 32.49 C ATOM 97 N3 DA A 5 9.980 10.745 45.063 0.50 30.78 N ATOM 98 C4 DA A 5 8.768 10.977 44.536 0.50 31.37 C ATOM 99 P DT A 6 7.183 11.286 50.119 0.50 61.22 P ATOM 100 OP1 DT A 6 6.490 10.987 51.400 0.50 65.70 O ATOM 101 OP2 DT A 6 6.694 12.421 49.282 0.50 60.31 O ATOM 102 O5' DT A 6 8.729 11.526 50.353 0.50 47.71 O ATOM 103 C5' DT A 6 9.652 10.627 49.744 0.50 47.17 C ATOM 104 C4' DT A 6 10.773 11.438 49.150 0.50 51.13 C ATOM 105 O4' DT A 6 10.414 11.897 47.825 0.50 52.80 O ATOM 106 C3' DT A 6 11.067 12.701 49.956 0.50 52.94 C ATOM 107 O3' DT A 6 12.452 12.788 50.272 0.50 60.20 O ATOM 108 C2' DT A 6 10.615 13.834 49.048 0.50 51.80 C ATOM 109 C1' DT A 6 10.889 13.225 47.697 0.50 47.43 C ATOM 110 N1 DT A 6 10.233 13.838 46.533 0.50 40.41 N ATOM 111 C2 DT A 6 11.039 14.237 45.494 0.50 37.80 C ATOM 112 O2 DT A 6 12.259 14.160 45.529 0.50 38.31 O ATOM 113 N3 DT A 6 10.368 14.758 44.420 0.50 34.94 N ATOM 114 C4 DT A 6 9.002 14.898 44.279 0.50 35.98 C ATOM 115 O4 DT A 6 8.539 15.385 43.253 0.50 40.97 O ATOM 116 C5 DT A 6 8.219 14.442 45.399 0.50 37.01 C ATOM 117 C7 DT A 6 6.728 14.537 45.325 0.50 39.48 C ATOM 118 C6 DT A 6 8.864 13.950 46.460 0.50 36.11 C ATOM 119 P DA A 7 12.938 13.983 51.198 0.50 85.91 P ATOM 120 OP1 DA A 7 13.526 13.391 52.425 0.50 91.76 O ATOM 121 OP2 DA A 7 11.813 14.970 51.335 0.50 80.90 O ATOM 122 O5' DA A 7 14.103 14.619 50.320 0.50 73.38 O ATOM 123 C5' DA A 7 14.459 14.029 49.066 0.50 64.92 C ATOM 124 C4' DA A 7 15.210 15.033 48.225 0.50 58.70 C ATOM 125 O4' DA A 7 14.376 15.554 47.161 0.50 53.41 O ATOM 126 C3' DA A 7 15.676 16.249 49.005 0.50 55.19 C ATOM 127 O3' DA A 7 16.892 16.637 48.388 0.50 59.45 O ATOM 128 C2' DA A 7 14.549 17.240 48.789 0.50 54.02 C ATOM 129 C1' DA A 7 14.162 16.947 47.345 0.50 48.73 C ATOM 130 N9 DA A 7 12.780 17.236 46.960 0.50 41.08 N ATOM 131 C8 DA A 7 11.605 17.041 47.648 0.50 39.01 C ATOM 132 N7 DA A 7 10.533 17.370 46.965 0.50 37.61 N ATOM 133 C5 DA A 7 11.036 17.784 45.737 0.50 33.43 C ATOM 134 C6 DA A 7 10.415 18.272 44.574 0.50 30.65 C ATOM 135 N6 DA A 7 9.099 18.409 44.442 0.50 31.44 N ATOM 136 N1 DA A 7 11.206 18.645 43.549 0.50 30.82 N ATOM 137 C2 DA A 7 12.529 18.490 43.673 0.50 30.54 C ATOM 138 N3 DA A 7 13.229 18.029 44.706 0.50 33.43 N ATOM 139 C4 DA A 7 12.416 17.706 45.722 0.50 33.89 C ATOM 140 P DA A 8 17.525 18.007 48.756 0.50 65.81 P ATOM 141 OP1 DA A 8 18.939 17.766 49.135 0.50 69.96 O ATOM 142 OP2 DA A 8 16.595 18.674 49.715 0.50 71.24 O ATOM 143 O5' DA A 8 17.526 18.785 47.366 0.50 62.42 O ATOM 144 C5' DA A 8 18.379 18.368 46.284 0.50 59.23 C ATOM 145 C4' DA A 8 18.204 19.242 45.060 0.50 55.88 C ATOM 146 O4' DA A 8 16.814 19.456 44.724 0.50 53.45 O ATOM 147 C3' DA A 8 18.817 20.627 45.157 0.50 57.95 C ATOM 148 O3' DA A 8 19.427 20.894 43.901 0.50 63.38 O ATOM 149 C2' DA A 8 17.627 21.527 45.448 0.50 53.86 C ATOM 150 C1' DA A 8 16.488 20.838 44.719 0.50 47.11 C ATOM 151 N9 DA A 8 15.144 20.966 45.294 0.50 39.52 N ATOM 152 C8 DA A 8 14.743 20.674 46.574 0.50 35.86 C ATOM 153 N7 DA A 8 13.455 20.820 46.771 0.50 34.64 N ATOM 154 C5 DA A 8 12.973 21.221 45.533 0.50 30.35 C ATOM 155 C6 DA A 8 11.682 21.539 45.079 0.50 28.26 C ATOM 156 N6 DA A 8 10.595 21.482 45.846 0.50 28.95 N ATOM 157 N1 DA A 8 11.538 21.882 43.783 0.50 27.69 N ATOM 158 C2 DA A 8 12.629 21.936 43.011 0.50 29.36 C ATOM 159 N3 DA A 8 13.896 21.660 43.321 0.50 33.39 N ATOM 160 C4 DA A 8 13.999 21.296 44.610 0.50 32.46 C ATOM 161 P DT A 9 20.141 22.274 43.710 0.50 79.00 P ATOM 162 OP1 DT A 9 21.342 22.071 42.844 0.50 75.84 O ATOM 163 OP2 DT A 9 20.291 22.869 45.061 0.50 83.52 O ATOM 164 O5' DT A 9 19.038 23.134 42.950 0.50 69.50 O ATOM 165 C5' DT A 9 17.749 22.584 42.626 0.50 60.62 C ATOM 166 C4' DT A 9 17.134 23.428 41.538 0.50 54.49 C ATOM 167 O4' DT A 9 15.739 23.691 41.828 0.50 51.67 O ATOM 168 C3' DT A 9 17.784 24.797 41.436 0.50 50.16 C ATOM 169 O3' DT A 9 17.699 25.221 40.079 0.50 53.45 O ATOM 170 C2' DT A 9 16.978 25.611 42.433 0.50 48.30 C ATOM 171 C1' DT A 9 15.574 25.022 42.315 0.50 44.63 C ATOM 172 N1 DT A 9 14.753 24.946 43.549 0.50 36.90 N ATOM 173 C2 DT A 9 13.408 25.164 43.405 0.50 32.98 C ATOM 174 O2 DT A 9 12.897 25.476 42.344 0.50 37.37 O ATOM 175 N3 DT A 9 12.677 25.007 44.552 0.50 33.44 N ATOM 176 C4 DT A 9 13.151 24.665 45.805 0.50 34.43 C ATOM 177 O4 DT A 9 12.373 24.557 46.747 0.50 36.09 O ATOM 178 C5 DT A 9 14.569 24.447 45.886 0.50 32.19 C ATOM 179 C7 DT A 9 15.172 24.104 47.210 0.50 30.67 C ATOM 180 C6 DT A 9 15.290 24.578 44.764 0.50 36.40 C ATOM 181 P DG A 10 18.450 26.562 39.588 0.50 66.13 P ATOM 182 OP1 DG A 10 18.609 26.516 38.103 0.50 54.17 O ATOM 183 OP2 DG A 10 19.620 26.787 40.479 0.50 58.40 O ATOM 184 O5' DG A 10 17.354 27.697 39.813 0.50 62.10 O ATOM 185 C5' DG A 10 16.171 27.762 38.993 0.50 54.03 C ATOM 186 C4' DG A 10 15.228 28.806 39.542 0.50 48.59 C ATOM 187 O4' DG A 10 14.731 28.355 40.819 0.50 45.06 O ATOM 188 C3' DG A 10 15.871 30.163 39.817 0.50 47.97 C ATOM 189 O3' DG A 10 14.940 31.174 39.445 0.50 53.27 O ATOM 190 C2' DG A 10 16.089 30.143 41.320 0.50 43.22 C ATOM 191 C1' DG A 10 14.844 29.419 41.740 0.50 39.95 C ATOM 192 N9 DG A 10 14.804 28.877 43.098 0.50 32.76 N ATOM 193 C8 DG A 10 15.862 28.472 43.869 0.50 30.10 C ATOM 194 N7 DG A 10 15.498 28.016 45.035 0.50 29.22 N ATOM 195 C5 DG A 10 14.122 28.183 45.054 0.50 27.75 C ATOM 196 C6 DG A 10 13.178 27.912 46.072 0.50 26.62 C ATOM 197 O6 DG A 10 13.370 27.450 47.204 0.50 30.63 O ATOM 198 N1 DG A 10 11.886 28.179 45.649 0.50 25.61 N ATOM 199 C2 DG A 10 11.547 28.692 44.434 0.50 24.76 C ATOM 200 N2 DG A 10 10.253 28.910 44.240 0.50 26.67 N ATOM 201 N3 DG A 10 12.408 28.931 43.468 0.50 27.83 N ATOM 202 C4 DG A 10 13.675 28.681 43.854 0.50 29.16 C ATOM 203 P DC A 11 15.420 32.450 38.612 0.50 55.83 P ATOM 204 OP1 DC A 11 15.384 32.091 37.179 0.50 70.78 O ATOM 205 OP2 DC A 11 16.665 32.959 39.234 0.50 51.45 O ATOM 206 O5' DC A 11 14.176 33.434 38.742 0.50 49.57 O ATOM 207 C5' DC A 11 12.842 32.888 38.670 0.50 44.97 C ATOM 208 C4' DC A 11 11.962 33.473 39.752 0.50 41.95 C ATOM 209 O4' DC A 11 12.121 32.728 40.983 0.50 35.26 O ATOM 210 C3' DC A 11 12.264 34.939 40.086 0.50 39.35 C ATOM 211 O3' DC A 11 11.080 35.701 39.846 0.50 37.76 O ATOM 212 C2' DC A 11 12.761 34.890 41.525 0.50 35.31 C ATOM 213 C1' DC A 11 12.086 33.641 42.045 0.50 33.42 C ATOM 214 N1 DC A 11 12.712 33.006 43.201 0.50 30.34 N ATOM 215 C2 DC A 11 11.893 32.546 44.234 0.50 27.97 C ATOM 216 O2 DC A 11 10.669 32.683 44.133 0.50 26.08 O ATOM 217 N3 DC A 11 12.452 31.927 45.294 0.50 26.65 N ATOM 218 C4 DC A 11 13.775 31.797 45.367 0.50 24.65 C ATOM 219 N4 DC A 11 14.284 31.207 46.448 0.50 22.28 N ATOM 220 C5 DC A 11 14.634 32.260 44.331 0.50 27.79 C ATOM 221 C6 DC A 11 14.066 32.858 43.278 0.50 27.75 C ATOM 222 P DG A 12 11.143 37.268 39.640 0.50 40.12 P ATOM 223 OP1 DG A 12 10.827 37.546 38.234 0.50 58.23 O ATOM 224 OP2 DG A 12 12.398 37.781 40.212 0.50 39.54 O ATOM 225 O5' DG A 12 9.795 37.764 40.325 0.50 39.65 O ATOM 226 C5' DG A 12 8.603 37.021 40.045 0.50 38.80 C ATOM 227 C4' DG A 12 7.643 36.943 41.213 0.50 40.47 C ATOM 228 O4' DG A 12 8.114 36.114 42.300 0.50 38.20 O ATOM 229 C3' DG A 12 7.260 38.260 41.861 0.50 41.39 C ATOM 230 O3' DG A 12 5.959 38.053 42.385 0.50 52.75 O ATOM 231 C2' DG A 12 8.201 38.352 43.034 0.50 41.34 C ATOM 232 C1' DG A 12 8.320 36.907 43.463 0.50 37.93 C ATOM 233 N9 DG A 12 9.615 36.537 44.037 0.50 35.15 N ATOM 234 C8 DG A 12 10.872 36.669 43.499 0.50 31.73 C ATOM 235 N7 DG A 12 11.814 36.228 44.288 0.50 29.57 N ATOM 236 C5 DG A 12 11.136 35.768 45.403 0.50 26.38 C ATOM 237 C6 DG A 12 11.618 35.204 46.606 0.50 24.80 C ATOM 238 O6 DG A 12 12.779 34.930 46.925 0.50 25.02 O ATOM 239 N1 DG A 12 10.581 34.905 47.473 0.50 24.14 N ATOM 240 C2 DG A 12 9.263 35.167 47.244 0.50 22.17 C ATOM 241 N2 DG A 12 8.431 34.842 48.212 0.50 21.91 N ATOM 242 N3 DG A 12 8.801 35.716 46.148 0.50 24.64 N ATOM 243 C4 DG A 12 9.780 35.967 45.266 0.50 28.65 C TER 244 DG A 12 ATOM 245 O5' DC B 1 12.316 0.916 28.074 0.50 29.37 O ATOM 246 C5' DC B 1 12.289 0.608 29.468 0.50 27.58 C ATOM 247 C4' DC B 1 10.856 0.543 29.918 0.50 25.34 C ATOM 248 O4' DC B 1 10.829 -0.004 31.233 0.50 25.75 O ATOM 249 C3' DC B 1 10.160 1.888 30.015 0.50 25.59 C ATOM 250 O3' DC B 1 8.798 1.676 29.675 0.50 26.32 O ATOM 251 C2' DC B 1 10.389 2.284 31.458 0.50 25.28 C ATOM 252 C1' DC B 1 10.334 0.954 32.165 0.50 24.00 C ATOM 253 N1 DC B 1 11.209 0.919 33.307 0.50 24.69 N ATOM 254 C2 DC B 1 10.808 0.288 34.507 0.50 23.19 C ATOM 255 O2 DC B 1 9.671 -0.161 34.596 0.50 29.00 O ATOM 256 N3 DC B 1 11.663 0.231 35.545 0.50 20.71 N ATOM 257 C4 DC B 1 12.864 0.797 35.447 0.50 22.99 C ATOM 258 N4 DC B 1 13.673 0.722 36.498 0.50 23.43 N ATOM 259 C5 DC B 1 13.309 1.424 34.239 0.50 29.76 C ATOM 260 C6 DC B 1 12.460 1.451 33.197 0.50 23.64 C ATOM 261 P DG B 2 7.891 2.861 29.277 0.50 28.95 P ATOM 262 OP1 DG B 2 6.936 2.359 28.294 0.50 32.35 O ATOM 263 OP2 DG B 2 8.681 4.033 29.072 0.50 30.62 O ATOM 264 O5' DG B 2 7.051 3.107 30.565 0.50 26.14 O ATOM 265 C5' DG B 2 6.493 1.941 31.138 0.50 26.13 C ATOM 266 C4' DG B 2 6.177 2.271 32.564 0.50 24.66 C ATOM 267 O4' DG B 2 7.401 2.319 33.311 0.50 23.48 O ATOM 268 C3' DG B 2 5.546 3.659 32.685 0.50 25.62 C ATOM 269 O3' DG B 2 4.285 3.373 33.290 0.50 28.48 O ATOM 270 C2' DG B 2 6.543 4.451 33.510 0.50 26.23 C ATOM 271 C1' DG B 2 7.242 3.342 34.314 0.50 29.70 C ATOM 272 N9 DG B 2 8.564 3.652 34.903 0.50 25.31 N ATOM 273 C8 DG B 2 9.553 4.327 34.236 0.50 30.17 C ATOM 274 N7 DG B 2 10.655 4.431 34.923 0.50 24.74 N ATOM 275 C5 DG B 2 10.416 3.696 36.059 0.50 20.41 C ATOM 276 C6 DG B 2 11.244 3.465 37.152 0.50 20.02 C ATOM 277 O6 DG B 2 12.410 3.831 37.318 0.50 21.03 O ATOM 278 N1 DG B 2 10.594 2.743 38.133 0.50 17.74 N ATOM 279 C2 DG B 2 9.293 2.338 38.074 0.50 19.75 C ATOM 280 N2 DG B 2 8.861 1.624 39.106 0.50 22.33 N ATOM 281 N3 DG B 2 8.512 2.520 37.031 0.50 20.88 N ATOM 282 C4 DG B 2 9.123 3.227 36.077 0.50 20.69 C ATOM 283 P DC B 3 3.174 4.476 33.512 0.50 32.49 P ATOM 284 OP1 DC B 3 1.874 3.800 33.243 0.50 30.30 O ATOM 285 OP2 DC B 3 3.565 5.653 32.726 0.50 28.60 O ATOM 286 O5' DC B 3 3.302 4.869 35.069 0.50 26.62 O ATOM 287 C5' DC B 3 3.278 3.866 36.043 0.50 27.47 C ATOM 288 C4' DC B 3 3.944 4.281 37.329 0.50 28.20 C ATOM 289 O4' DC B 3 5.377 4.298 37.219 0.50 26.18 O ATOM 290 C3' DC B 3 3.588 5.646 37.876 0.50 29.28 C ATOM 291 O3' DC B 3 2.339 5.642 38.578 0.50 35.10 O ATOM 292 C2' DC B 3 4.732 5.902 38.841 0.50 27.53 C ATOM 293 C1' DC B 3 5.895 5.077 38.280 0.50 25.75 C ATOM 294 N1 DC B 3 7.016 5.839 37.742 0.50 23.77 N ATOM 295 C2 DC B 3 8.213 5.837 38.431 0.50 23.14 C ATOM 296 O2 DC B 3 8.276 5.242 39.512 0.50 28.63 O ATOM 297 N3 DC B 3 9.283 6.458 37.901 0.50 21.76 N ATOM 298 C4 DC B 3 9.172 7.106 36.746 0.50 21.59 C ATOM 299 N4 DC B 3 10.256 7.721 36.268 0.50 20.11 N ATOM 300 C5 DC B 3 7.947 7.157 36.033 0.50 23.57 C ATOM 301 C6 DC B 3 6.903 6.506 36.558 0.50 25.15 C ATOM 302 P DA B 4 1.759 7.018 39.158 0.50 38.82 P ATOM 303 OP1 DA B 4 0.348 6.826 39.477 0.50 43.31 O ATOM 304 OP2 DA B 4 2.176 8.109 38.217 0.50 45.98 O ATOM 305 O5' DA B 4 2.481 7.156 40.566 0.50 33.51 O ATOM 306 C5' DA B 4 2.352 6.093 41.506 0.50 33.45 C ATOM 307 C4' DA B 4 3.357 6.246 42.622 0.50 36.82 C ATOM 308 O4' DA B 4 4.668 6.458 42.058 0.50 34.53 O ATOM 309 C3' DA B 4 3.144 7.454 43.526 0.50 40.95 C ATOM 310 O3' DA B 4 3.867 7.216 44.746 0.50 52.37 O ATOM 311 C2' DA B 4 3.895 8.523 42.766 0.50 37.00 C ATOM 312 C1' DA B 4 5.141 7.706 42.495 0.50 34.90 C ATOM 313 N9 DA B 4 6.090 8.219 41.508 0.50 31.91 N ATOM 314 C8 DA B 4 5.891 8.816 40.287 0.50 31.92 C ATOM 315 N7 DA B 4 7.001 9.187 39.695 0.50 28.53 N ATOM 316 C5 DA B 4 7.988 8.850 40.603 0.50 24.26 C ATOM 317 C6 DA B 4 9.377 8.992 40.573 0.50 24.85 C ATOM 318 N6 DA B 4 10.044 9.529 39.548 0.50 24.28 N ATOM 319 N1 DA B 4 10.073 8.578 41.653 0.50 25.91 N ATOM 320 C2 DA B 4 9.402 8.015 42.672 0.50 27.39 C ATOM 321 N3 DA B 4 8.096 7.790 42.796 0.50 25.84 N ATOM 322 C4 DA B 4 7.439 8.274 41.734 0.50 25.51 C ATOM 323 P DT B 5 3.385 7.905 46.103 0.50 53.11 P ATOM 324 OP1 DT B 5 3.338 6.859 47.145 0.50 47.48 O ATOM 325 OP2 DT B 5 2.224 8.793 45.772 0.50 50.12 O ATOM 326 O5' DT B 5 4.604 8.812 46.538 0.50 49.44 O ATOM 327 C5' DT B 5 5.549 8.264 47.439 0.50 49.61 C ATOM 328 C4' DT B 5 6.935 8.609 46.963 0.50 51.34 C ATOM 329 O4' DT B 5 6.896 9.176 45.635 0.50 49.78 O ATOM 330 C3' DT B 5 7.607 9.659 47.834 0.50 54.89 C ATOM 331 O3' DT B 5 8.720 9.060 48.464 0.50 61.10 O ATOM 332 C2' DT B 5 8.028 10.761 46.873 0.50 54.10 C ATOM 333 C1' DT B 5 7.995 10.058 45.542 0.50 45.31 C ATOM 334 N1 DT B 5 7.825 10.874 44.330 0.50 37.95 N ATOM 335 C2 DT B 5 8.976 11.242 43.682 0.50 31.41 C ATOM 336 O2 DT B 5 10.083 10.995 44.120 0.50 36.29 O ATOM 337 N3 DT B 5 8.782 11.897 42.495 0.50 26.64 N ATOM 338 C4 DT B 5 7.572 12.205 41.904 0.50 27.27 C ATOM 339 O4 DT B 5 7.547 12.792 40.834 0.50 30.01 O ATOM 340 C5 DT B 5 6.404 11.782 42.630 0.50 29.52 C ATOM 341 C7 DT B 5 5.052 12.101 42.075 0.50 27.40 C ATOM 342 C6 DT B 5 6.585 11.115 43.777 0.50 33.92 C ATOM 343 P DT B 6 9.061 9.533 49.898 0.50 57.94 P ATOM 344 OP1 DT B 6 10.013 8.546 50.472 0.50 66.44 O ATOM 345 OP2 DT B 6 7.777 9.785 50.564 0.50 63.78 O ATOM 346 O5' DT B 6 9.794 10.926 49.653 0.50 48.73 O ATOM 347 C5' DT B 6 11.191 11.038 49.973 0.50 46.91 C ATOM 348 C4' DT B 6 11.953 11.938 49.028 0.50 47.87 C ATOM 349 O4' DT B 6 11.216 12.223 47.819 0.50 48.06 O ATOM 350 C3' DT B 6 12.330 13.296 49.614 0.50 49.27 C ATOM 351 O3' DT B 6 13.700 13.202 50.005 0.50 52.19 O ATOM 352 C2' DT B 6 12.045 14.299 48.493 0.50 48.03 C ATOM 353 C1' DT B 6 11.687 13.444 47.277 0.50 40.96 C ATOM 354 N1 DT B 6 10.638 13.953 46.364 0.50 34.80 N ATOM 355 C2 DT B 6 10.998 14.479 45.146 0.50 30.21 C ATOM 356 O2 DT B 6 12.160 14.645 44.808 0.50 28.41 O ATOM 357 N3 DT B 6 9.944 14.851 44.351 0.50 27.80 N ATOM 358 C4 DT B 6 8.599 14.734 44.642 0.50 28.20 C ATOM 359 O4 DT B 6 7.755 15.110 43.825 0.50 28.93 O ATOM 360 C5 DT B 6 8.298 14.156 45.925 0.50 28.92 C ATOM 361 C7 DT B 6 6.867 13.943 46.301 0.50 29.86 C ATOM 362 C6 DT B 6 9.316 13.798 46.710 0.50 30.77 C ATOM 363 P DA B 7 14.428 14.472 50.608 0.50 74.69 P ATOM 364 OP1 DA B 7 15.445 13.995 51.593 0.50 81.83 O ATOM 365 OP2 DA B 7 13.385 15.462 51.016 0.50 89.81 O ATOM 366 O5' DA B 7 15.171 15.103 49.357 0.50 60.73 O ATOM 367 C5' DA B 7 16.129 14.325 48.655 0.50 58.39 C ATOM 368 C4' DA B 7 16.770 15.190 47.603 0.50 54.85 C ATOM 369 O4' DA B 7 15.775 15.528 46.610 0.50 51.15 O ATOM 370 C3' DA B 7 17.321 16.511 48.132 0.50 52.52 C ATOM 371 O3' DA B 7 18.572 16.700 47.464 0.50 58.35 O ATOM 372 C2' DA B 7 16.216 17.500 47.813 0.50 47.57 C ATOM 373 C1' DA B 7 15.598 16.930 46.541 0.50 43.53 C ATOM 374 N9 DA B 7 14.174 17.173 46.394 0.50 35.78 N ATOM 375 C8 DA B 7 13.193 16.887 47.309 0.50 35.31 C ATOM 376 N7 DA B 7 11.988 17.202 46.905 0.50 33.94 N ATOM 377 C5 DA B 7 12.185 17.697 45.624 0.50 29.29 C ATOM 378 C6 DA B 7 11.296 18.192 44.654 0.50 27.66 C ATOM 379 N6 DA B 7 9.974 18.251 44.819 0.50 26.42 N ATOM 380 N1 DA B 7 11.820 18.647 43.499 0.50 29.13 N ATOM 381 C2 DA B 7 13.144 18.562 43.319 0.50 30.83 C ATOM 382 N3 DA B 7 14.081 18.098 44.146 0.50 33.36 N ATOM 383 C4 DA B 7 13.528 17.680 45.296 0.50 32.14 C ATOM 384 P DT B 8 19.488 17.949 47.771 0.50 61.70 P ATOM 385 OP1 DT B 8 20.873 17.613 47.346 0.50 58.45 O ATOM 386 OP2 DT B 8 19.234 18.373 49.169 0.50 65.81 O ATOM 387 O5' DT B 8 18.933 19.041 46.749 0.50 64.36 O ATOM 388 C5' DT B 8 17.872 18.713 45.834 0.50 61.38 C ATOM 389 C4' DT B 8 17.878 19.632 44.634 0.50 57.78 C ATOM 390 O4' DT B 8 16.517 19.908 44.236 0.50 56.90 O ATOM 391 C3' DT B 8 18.485 20.998 44.890 0.50 59.54 C ATOM 392 O3' DT B 8 18.925 21.547 43.654 0.50 62.61 O ATOM 393 C2' DT B 8 17.307 21.771 45.445 0.50 57.03 C ATOM 394 C1' DT B 8 16.153 21.231 44.614 0.50 51.29 C ATOM 395 N1 DT B 8 14.828 21.173 45.280 0.50 44.14 N ATOM 396 C2 DT B 8 13.738 21.432 44.486 0.50 39.11 C ATOM 397 O2 DT B 8 13.832 21.695 43.300 0.50 45.23 O ATOM 398 N3 DT B 8 12.530 21.387 45.136 0.50 36.22 N ATOM 399 C4 DT B 8 12.311 21.092 46.467 0.50 37.54 C ATOM 400 O4 DT B 8 11.168 21.060 46.907 0.50 40.57 O ATOM 401 C5 DT B 8 13.497 20.839 47.246 0.50 39.15 C ATOM 402 C7 DT B 8 13.351 20.537 48.703 0.50 38.19 C ATOM 403 C6 DT B 8 14.684 20.892 46.623 0.50 40.48 C ATOM 404 P DA B 9 20.085 22.618 43.671 0.50 76.88 P ATOM 405 OP1 DA B 9 21.382 21.882 43.575 0.50 74.47 O ATOM 406 OP2 DA B 9 19.816 23.526 44.823 0.50 74.95 O ATOM 407 O5' DA B 9 19.870 23.446 42.324 0.50 63.27 O ATOM 408 C5' DA B 9 18.978 22.974 41.304 0.50 57.09 C ATOM 409 C4' DA B 9 18.084 24.090 40.822 0.50 50.65 C ATOM 410 O4' DA B 9 16.795 23.985 41.469 0.50 50.00 O ATOM 411 C3' DA B 9 18.600 25.499 41.103 0.50 50.23 C ATOM 412 O3' DA B 9 18.399 26.248 39.900 0.50 58.37 O ATOM 413 C2' DA B 9 17.745 25.961 42.271 0.50 49.41 C ATOM 414 C1' DA B 9 16.434 25.218 42.064 0.50 46.50 C ATOM 415 N9 DA B 9 15.650 24.929 43.276 0.50 40.31 N ATOM 416 C8 DA B 9 16.101 24.447 44.480 0.50 42.67 C ATOM 417 N7 DA B 9 15.155 24.296 45.379 0.50 38.03 N ATOM 418 C5 DA B 9 14.007 24.712 44.723 0.50 33.15 C ATOM 419 C6 DA B 9 12.665 24.775 45.124 0.50 33.97 C ATOM 420 N6 DA B 9 12.236 24.424 46.340 0.50 33.64 N ATOM 421 N1 DA B 9 11.764 25.225 44.226 0.50 31.57 N ATOM 422 C2 DA B 9 12.194 25.579 43.010 0.50 31.90 C ATOM 423 N3 DA B 9 13.427 25.562 42.515 0.50 33.85 N ATOM 424 C4 DA B 9 14.296 25.105 43.429 0.50 34.15 C ATOM 425 P DG B 10 19.170 27.645 39.592 0.50 58.03 P ATOM 426 OP1 DG B 10 19.605 27.616 38.179 0.50 54.66 O ATOM 427 OP2 DG B 10 20.128 27.941 40.689 0.50 57.07 O ATOM 428 O5' DG B 10 17.994 28.715 39.618 0.50 55.14 O ATOM 429 C5' DG B 10 16.712 28.426 39.012 0.50 51.30 C ATOM 430 C4' DG B 10 15.661 29.336 39.600 0.50 47.41 C ATOM 431 O4' DG B 10 15.100 28.687 40.763 0.50 40.90 O ATOM 432 C3' DG B 10 16.235 30.663 40.107 0.50 48.32 C ATOM 433 O3' DG B 10 15.367 31.775 39.910 0.50 54.93 O ATOM 434 C2' DG B 10 16.328 30.438 41.601 0.50 44.02 C ATOM 435 C1' DG B 10 15.072 29.646 41.793 0.50 38.43 C ATOM 436 N9 DG B 10 14.925 28.980 43.083 0.50 32.20 N ATOM 437 C8 DG B 10 15.916 28.515 43.906 0.50 29.90 C ATOM 438 N7 DG B 10 15.460 28.011 45.019 0.50 28.94 N ATOM 439 C5 DG B 10 14.092 28.228 44.957 0.50 27.47 C ATOM 440 C6 DG B 10 13.073 27.940 45.894 0.50 26.08 C ATOM 441 O6 DG B 10 13.175 27.422 47.014 0.50 29.70 O ATOM 442 N1 DG B 10 11.822 28.275 45.402 0.50 25.00 N ATOM 443 C2 DG B 10 11.585 28.868 44.198 0.50 25.50 C ATOM 444 N2 DG B 10 10.318 29.157 43.930 0.50 27.60 N ATOM 445 N3 DG B 10 12.516 29.123 43.306 0.50 29.45 N ATOM 446 C4 DG B 10 13.745 28.810 43.763 0.50 29.53 C ATOM 447 P DC B 11 15.062 32.308 38.446 0.50 60.92 P ATOM 448 OP1 DC B 11 15.276 31.190 37.504 0.50 72.97 O ATOM 449 OP2 DC B 11 15.761 33.599 38.276 0.50 52.70 O ATOM 450 O5' DC B 11 13.483 32.506 38.437 0.50 54.97 O ATOM 451 C5' DC B 11 12.598 31.411 38.748 0.50 54.97 C ATOM 452 C4' DC B 11 11.284 31.936 39.284 0.50 51.05 C ATOM 453 O4' DC B 11 11.209 31.672 40.699 0.50 48.33 O ATOM 454 C3' DC B 11 11.092 33.444 39.141 0.50 50.59 C ATOM 455 O3' DC B 11 9.729 33.756 38.832 0.50 50.36 O ATOM 456 C2' DC B 11 11.594 33.986 40.470 0.50 45.59 C ATOM 457 C1' DC B 11 11.183 32.892 41.435 0.50 43.03 C ATOM 458 N1 DC B 11 12.012 32.689 42.621 0.50 38.54 N ATOM 459 C2 DC B 11 11.378 32.277 43.794 0.50 35.39 C ATOM 460 O2 DC B 11 10.151 32.189 43.805 0.50 35.74 O ATOM 461 N3 DC B 11 12.119 31.990 44.883 0.50 31.59 N ATOM 462 C4 DC B 11 13.445 32.093 44.830 0.50 29.00 C ATOM 463 N4 DC B 11 14.136 31.791 45.931 0.50 27.01 N ATOM 464 C5 DC B 11 14.122 32.500 43.643 0.50 30.76 C ATOM 465 C6 DC B 11 13.373 32.775 42.568 0.50 32.73 C ATOM 466 P DG B 12 9.304 35.288 38.640 0.50 56.49 P ATOM 467 OP1 DG B 12 8.811 35.450 37.269 0.50 52.85 O ATOM 468 OP2 DG B 12 10.389 36.162 39.191 0.50 48.35 O ATOM 469 O5' DG B 12 8.031 35.433 39.584 0.50 57.24 O ATOM 470 C5' DG B 12 8.141 35.043 40.966 0.50 51.60 C ATOM 471 C4' DG B 12 6.899 35.409 41.736 0.50 42.46 C ATOM 472 O4' DG B 12 7.172 35.258 43.126 0.50 38.12 O ATOM 473 C3' DG B 12 6.484 36.856 41.623 0.50 39.92 C ATOM 474 O3' DG B 12 5.108 36.833 42.017 0.50 42.37 O ATOM 475 C2' DG B 12 7.451 37.536 42.578 0.50 36.52 C ATOM 476 C1' DG B 12 7.663 36.482 43.656 0.50 35.69 C ATOM 477 N9 DG B 12 9.028 36.229 44.115 0.50 36.04 N ATOM 478 C8 DG B 12 10.170 36.158 43.354 0.50 35.12 C ATOM 479 N7 DG B 12 11.233 35.867 44.053 0.50 32.64 N ATOM 480 C5 DG B 12 10.757 35.685 45.339 0.50 29.65 C ATOM 481 C6 DG B 12 11.439 35.352 46.528 0.50 28.46 C ATOM 482 O6 DG B 12 12.635 35.114 46.690 0.50 29.83 O ATOM 483 N1 DG B 12 10.573 35.284 47.607 0.50 28.57 N ATOM 484 C2 DG B 12 9.229 35.519 47.556 0.50 25.53 C ATOM 485 N2 DG B 12 8.581 35.445 48.719 0.50 25.42 N ATOM 486 N3 DG B 12 8.582 35.856 46.463 0.50 26.85 N ATOM 487 C4 DG B 12 9.396 35.893 45.393 0.50 30.27 C TER 488 DG B 12 HETATM 489 NA NA B 101 7.226 34.228 37.983 0.50 59.30 NA HETATM 490 O HOH A 101 -0.321 5.163 32.415 1.00 30.96 O HETATM 491 O HOH A 102 7.226 0.000 26.960 0.50 33.60 O HETATM 492 O HOH A 103 14.484 26.782 49.463 1.00 52.65 O HETATM 493 O HOH A 104 16.042 27.427 47.726 1.00 46.75 O HETATM 494 O HOH A 105 14.567 37.053 44.299 1.00 52.32 O HETATM 495 O HOH A 106 12.998 24.240 49.566 1.00 66.28 O HETATM 496 O HOH A 107 17.157 30.535 46.961 1.00 46.67 O HETATM 497 O HOH A 108 4.649 8.256 35.290 1.00 49.45 O HETATM 498 O HOH A 109 8.918 6.135 45.374 1.00 54.64 O HETATM 499 O HOH A 110 13.018 5.576 33.111 1.00 52.98 O HETATM 500 O HOH A 111 0.534 10.537 42.136 1.00 75.63 O HETATM 501 O HOH B 201 1.848 2.057 32.059 1.00 28.43 O HETATM 502 O HOH B 202 10.717 8.699 33.647 1.00 66.08 O HETATM 503 O HOH B 203 4.215 2.945 27.739 1.00 40.58 O HETATM 504 O HOH B 204 10.831 -0.554 25.979 1.00 63.23 O HETATM 505 O HOH B 205 9.174 6.177 31.244 1.00 47.57 O HETATM 506 O HOH B 206 3.057 10.301 40.221 1.00 63.36 O HETATM 507 O HOH B 207 11.541 6.610 47.474 1.00 78.62 O HETATM 508 O HOH B 208 6.298 38.881 37.664 1.00 66.87 O CONECT 455 489 CONECT 467 489 CONECT 469 489 CONECT 489 455 467 469 MASTER 335 0 1 0 0 0 0 6 506 2 4 2 END