data_5W50 # _entry.id 5W50 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5W50 pdb_00005w50 10.2210/pdb5w50/pdb WWPDB D_1000228452 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5W50 _pdbx_database_status.recvd_initial_deposition_date 2017-06-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guenther, E.L.' 1 ? 'Trinh, H.' 2 ? 'Sawaya, M.R.' 3 ? 'Eisenberg, D.S.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat. Struct. Mol. Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 25 _citation.language ? _citation.page_first 311 _citation.page_last 319 _citation.title 'Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-018-0045-5 _citation.pdbx_database_id_PubMed 29531287 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guenther, E.L.' 1 ? primary 'Ge, P.' 2 ? primary 'Trinh, H.' 3 ? primary 'Sawaya, M.R.' 4 ? primary 'Cascio, D.' 5 ? primary 'Boyer, D.R.' 6 ? primary 'Gonen, T.' 7 ? primary 'Zhou, Z.H.' 8 ? primary 'Eisenberg, D.S.' 9 ? # _cell.angle_alpha 95.630 _cell.angle_alpha_esd ? _cell.angle_beta 98.210 _cell.angle_beta_esd ? _cell.angle_gamma 76.500 _cell.angle_gamma_esd ? _cell.entry_id 5W50 _cell.details ? _cell.formula_units_Z ? _cell.length_a 11.543 _cell.length_a_esd ? _cell.length_b 9.592 _cell.length_b_esd ? _cell.length_c 21.175 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W50 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'TAR DNA-binding protein 43' 656.878 2 ? ? 'RRM2 peptide (UNP residues 248-253)' ? 2 water nat water 18.015 9 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TDP-43, LIIKGI' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LIIKGI _entity_poly.pdbx_seq_one_letter_code_can LIIKGI _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ILE n 1 3 ILE n 1 4 LYS n 1 5 GLY n 1 6 ILE n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TADBP_HUMAN _struct_ref.pdbx_db_accession Q13148 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LIIKGI _struct_ref.pdbx_align_begin 248 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5W50 A 1 ? 6 ? Q13148 248 ? 253 ? 248 253 2 1 5W50 B 1 ? 6 ? Q13148 248 ? 253 ? 248 253 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5W50 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.71 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 28.22 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM CHES, pH 9.5, 20% PEG8000, 10 mM lithium hydroxide' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC HF-4M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-03-06 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(220)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5W50 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.400 _reflns.d_resolution_low 100.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 1561 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.500 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.600 _reflns.pdbx_Rmerge_I_obs 0.127 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.082 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.400 1.450 ? ? ? ? ? ? ? 94.600 ? ? ? ? 0.361 ? ? ? ? ? ? ? ? 4.500 ? 1.125 ? ? ? ? ? 1 1 ? ? 1.450 1.510 ? ? ? ? ? ? ? 92.400 ? ? ? ? 0.357 ? ? ? ? ? ? ? ? 4.300 ? 1.045 ? ? ? ? ? 2 1 ? ? 1.510 1.580 ? ? ? ? ? ? ? 93.500 ? ? ? ? 0.301 ? ? ? ? ? ? ? ? 4.600 ? 1.113 ? ? ? ? ? 3 1 ? ? 1.580 1.660 ? ? ? ? ? ? ? 95.100 ? ? ? ? 0.272 ? ? ? ? ? ? ? ? 5.100 ? 0.935 ? ? ? ? ? 4 1 ? ? 1.660 1.760 ? ? ? ? ? ? ? 95.000 ? ? ? ? 0.189 ? ? ? ? ? ? ? ? 4.700 ? 1.072 ? ? ? ? ? 5 1 ? ? 1.760 1.900 ? ? ? ? ? ? ? 93.800 ? ? ? ? 0.153 ? ? ? ? ? ? ? ? 4.900 ? 1.131 ? ? ? ? ? 6 1 ? ? 1.900 2.090 ? ? ? ? ? ? ? 94.800 ? ? ? ? 0.126 ? ? ? ? ? ? ? ? 4.300 ? 1.158 ? ? ? ? ? 7 1 ? ? 2.090 2.390 ? ? ? ? ? ? ? 93.900 ? ? ? ? 0.121 ? ? ? ? ? ? ? ? 4.800 ? 1.102 ? ? ? ? ? 8 1 ? ? 2.390 3.020 ? ? ? ? ? ? ? 98.200 ? ? ? ? 0.104 ? ? ? ? ? ? ? ? 4.700 ? 1.120 ? ? ? ? ? 9 1 ? ? 3.020 100.000 ? ? ? ? ? ? ? 94.500 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 4.100 ? 1.040 ? ? ? ? ? 10 1 ? ? # _refine.aniso_B[1][1] 0.2500 _refine.aniso_B[1][2] -0.0400 _refine.aniso_B[1][3] -0.2500 _refine.aniso_B[2][2] 0.2000 _refine.aniso_B[2][3] -0.2400 _refine.aniso_B[3][3] -0.3900 _refine.B_iso_max 30.790 _refine.B_iso_mean 10.6280 _refine.B_iso_min 3.150 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9570 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5W50 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4000 _refine.ls_d_res_low 20.9100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1398 _refine.ls_number_reflns_R_free 159 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.5800 _refine.ls_percent_reflns_R_free 10.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1714 _refine.ls_R_factor_R_free 0.2075 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1678 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2OMQ' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0800 _refine.pdbx_overall_ESU_R_Free 0.0840 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.0830 _refine.overall_SU_ML 0.0440 _refine.overall_SU_R_Cruickshank_DPI 0.0802 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4000 _refine_hist.d_res_low 20.9100 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 101 _refine_hist.pdbx_number_residues_total 12 _refine_hist.pdbx_B_iso_mean_solvent 19.52 _refine_hist.pdbx_number_atoms_protein 92 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.019 90 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 124 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.643 2.158 118 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.799 3.000 284 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.627 5.000 10 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 13.739 15.000 24 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 18 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 78 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 10 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4000 _refine_ls_shell.d_res_low 1.4360 _refine_ls_shell.number_reflns_all 64 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 6 _refine_ls_shell.number_reflns_R_work 58 _refine_ls_shell.percent_reflns_obs 49.2300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2080 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1710 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5W50 _struct.title 'Crystal structure of the segment, LIIKGI, from the RRM2 of TDP-43, residues 248-253' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5W50 _struct_keywords.text 'Amyloid, steric zipper, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 2 ? ILE A 3 ? ILE A 249 ILE A 250 AA1 2 ILE B 2 ? ILE B 3 ? ILE B 249 ILE B 250 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 3 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 250 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 2 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 249 # _atom_sites.entry_id 5W50 _atom_sites.fract_transf_matrix[1][1] 0.086633 _atom_sites.fract_transf_matrix[1][2] -0.020803 _atom_sites.fract_transf_matrix[1][3] 0.011128 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.107217 _atom_sites.fract_transf_matrix[2][3] 0.007228 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.047823 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . LEU A 1 1 ? 0.811 1.024 12.576 1.00 5.93 ? 248 LEU A N 1 ATOM 2 C CA . LEU A 1 1 ? 1.478 1.334 11.271 1.00 4.56 ? 248 LEU A CA 1 ATOM 3 C C . LEU A 1 1 ? 0.571 0.902 10.102 1.00 4.32 ? 248 LEU A C 1 ATOM 4 O O . LEU A 1 1 ? 0.081 -0.245 10.028 1.00 5.00 ? 248 LEU A O 1 ATOM 5 C CB . LEU A 1 1 ? 2.838 0.638 11.182 1.00 6.28 ? 248 LEU A CB 1 ATOM 6 C CG . LEU A 1 1 ? 3.594 0.839 9.864 1.00 5.88 ? 248 LEU A CG 1 ATOM 7 C CD1 . LEU A 1 1 ? 4.015 2.277 9.665 1.00 6.62 ? 248 LEU A CD1 1 ATOM 8 C CD2 . LEU A 1 1 ? 4.817 -0.076 9.847 1.00 8.56 ? 248 LEU A CD2 1 ATOM 9 N N . ILE A 1 2 ? 0.341 1.822 9.174 1.00 3.66 ? 249 ILE A N 1 ATOM 10 C CA . ILE A 1 2 ? -0.276 1.514 7.882 1.00 4.18 ? 249 ILE A CA 1 ATOM 11 C C . ILE A 1 2 ? 0.684 1.931 6.773 1.00 3.41 ? 249 ILE A C 1 ATOM 12 O O . ILE A 1 2 ? 1.183 3.050 6.765 1.00 3.71 ? 249 ILE A O 1 ATOM 13 C CB . ILE A 1 2 ? -1.628 2.252 7.713 1.00 4.62 ? 249 ILE A CB 1 ATOM 14 C CG1 . ILE A 1 2 ? -2.604 1.840 8.811 1.00 6.26 ? 249 ILE A CG1 1 ATOM 15 C CG2 . ILE A 1 2 ? -2.278 1.968 6.361 1.00 5.06 ? 249 ILE A CG2 1 ATOM 16 C CD1 . ILE A 1 2 ? -3.764 2.793 8.981 1.00 8.05 ? 249 ILE A CD1 1 ATOM 17 N N . ILE A 1 3 ? 0.917 1.019 5.834 1.00 3.15 ? 250 ILE A N 1 ATOM 18 C CA . ILE A 1 3 ? 1.646 1.366 4.613 1.00 3.51 ? 250 ILE A CA 1 ATOM 19 C C . ILE A 1 3 ? 0.762 0.926 3.447 1.00 4.40 ? 250 ILE A C 1 ATOM 20 O O . ILE A 1 3 ? 0.403 -0.229 3.354 1.00 4.09 ? 250 ILE A O 1 ATOM 21 C CB . ILE A 1 3 ? 3.068 0.736 4.568 1.00 4.32 ? 250 ILE A CB 1 ATOM 22 C CG1 . ILE A 1 3 ? 3.875 1.079 5.825 1.00 4.77 ? 250 ILE A CG1 1 ATOM 23 C CG2 . ILE A 1 3 ? 3.784 1.183 3.278 1.00 4.71 ? 250 ILE A CG2 1 ATOM 24 C CD1 . ILE A 1 3 ? 5.304 0.515 5.822 1.00 7.24 ? 250 ILE A CD1 1 ATOM 25 N N . LYS A 1 4 ? 0.358 1.862 2.596 1.00 5.05 ? 251 LYS A N 1 ATOM 26 C CA . LYS A 1 4 ? -0.500 1.554 1.442 1.00 8.32 ? 251 LYS A CA 1 ATOM 27 C C . LYS A 1 4 ? 0.117 1.984 0.115 1.00 8.92 ? 251 LYS A C 1 ATOM 28 O O . LYS A 1 4 ? 0.626 3.086 0.013 1.00 9.94 ? 251 LYS A O 1 ATOM 29 C CB . LYS A 1 4 ? -1.850 2.241 1.596 1.00 10.12 ? 251 LYS A CB 1 ATOM 30 C CG . LYS A 1 4 ? -2.839 1.832 0.509 1.00 11.54 ? 251 LYS A CG 1 ATOM 31 C CD . LYS A 1 4 ? -4.244 2.293 0.837 1.00 16.06 ? 251 LYS A CD 1 ATOM 32 C CE . LYS A 1 4 ? -5.263 1.648 -0.099 1.00 19.69 ? 251 LYS A CE 1 ATOM 33 N NZ . LYS A 1 4 ? -4.927 1.834 -1.530 1.00 19.80 ? 251 LYS A NZ 1 ATOM 34 N N . GLY A 1 5 ? 0.091 1.117 -0.891 1.00 7.69 ? 252 GLY A N 1 ATOM 35 C CA . GLY A 1 5 ? 0.510 1.467 -2.261 1.00 9.25 ? 252 GLY A CA 1 ATOM 36 C C . GLY A 1 5 ? -0.671 1.264 -3.185 1.00 11.37 ? 252 GLY A C 1 ATOM 37 O O . GLY A 1 5 ? -1.814 1.274 -2.743 1.00 12.66 ? 252 GLY A O 1 ATOM 38 N N . ILE A 1 6 ? -0.391 1.020 -4.468 1.00 13.25 ? 253 ILE A N 1 ATOM 39 C CA . ILE A 1 6 ? -1.474 0.711 -5.421 1.00 14.90 ? 253 ILE A CA 1 ATOM 40 C C . ILE A 1 6 ? -2.072 -0.652 -5.104 1.00 21.28 ? 253 ILE A C 1 ATOM 41 O O . ILE A 1 6 ? -1.336 -1.622 -4.964 1.00 20.48 ? 253 ILE A O 1 ATOM 42 C CB . ILE A 1 6 ? -0.984 0.723 -6.878 1.00 15.48 ? 253 ILE A CB 1 ATOM 43 C CG1 . ILE A 1 6 ? -0.562 2.131 -7.264 1.00 15.58 ? 253 ILE A CG1 1 ATOM 44 C CG2 . ILE A 1 6 ? -2.087 0.225 -7.820 1.00 18.10 ? 253 ILE A CG2 1 ATOM 45 C CD1 . ILE A 1 6 ? 0.179 2.216 -8.587 1.00 15.02 ? 253 ILE A CD1 1 ATOM 46 O OXT . ILE A 1 6 ? -3.301 -0.831 -4.984 1.00 28.07 ? 253 ILE A OXT 1 ATOM 47 N N . LEU B 1 1 ? -0.742 -3.458 0.867 1.00 5.17 ? 248 LEU B N 1 ATOM 48 C CA . LEU B 1 1 ? -1.234 -2.860 2.112 1.00 4.83 ? 248 LEU B CA 1 ATOM 49 C C . LEU B 1 1 ? -0.735 -3.659 3.325 1.00 4.49 ? 248 LEU B C 1 ATOM 50 O O . LEU B 1 1 ? -0.956 -4.892 3.401 1.00 5.10 ? 248 LEU B O 1 ATOM 51 C CB . LEU B 1 1 ? -2.763 -2.889 2.077 1.00 7.39 ? 248 LEU B CB 1 ATOM 52 C CG . LEU B 1 1 ? -3.522 -2.399 3.298 1.00 7.70 ? 248 LEU B CG 1 ATOM 53 C CD1 . LEU B 1 1 ? -3.056 -1.001 3.649 1.00 6.72 ? 248 LEU B CD1 1 ATOM 54 C CD2 . LEU B 1 1 ? -5.013 -2.389 2.986 1.00 9.44 ? 248 LEU B CD2 1 ATOM 55 N N . ILE B 1 2 ? -0.078 -2.977 4.280 1.00 4.38 ? 249 ILE B N 1 ATOM 56 C CA . ILE B 1 2 ? 0.360 -3.578 5.537 1.00 4.70 ? 249 ILE B CA 1 ATOM 57 C C . ILE B 1 2 ? -0.313 -2.796 6.656 1.00 4.09 ? 249 ILE B C 1 ATOM 58 O O . ILE B 1 2 ? -0.218 -1.564 6.709 1.00 5.55 ? 249 ILE B O 1 ATOM 59 C CB . ILE B 1 2 ? 1.910 -3.523 5.715 1.00 6.70 ? 249 ILE B CB 1 ATOM 60 C CG1 . ILE B 1 2 ? 2.524 -4.505 4.708 1.00 9.35 ? 249 ILE B CG1 1 ATOM 61 C CG2 . ILE B 1 2 ? 2.338 -3.813 7.180 1.00 6.75 ? 249 ILE B CG2 1 ATOM 62 C CD1 . ILE B 1 2 ? 4.032 -4.564 4.658 1.00 11.81 ? 249 ILE B CD1 1 ATOM 63 N N . ILE B 1 3 ? -0.944 -3.513 7.575 1.00 4.06 ? 250 ILE B N 1 ATOM 64 C CA . ILE B 1 3 ? -1.541 -2.908 8.768 1.00 3.82 ? 250 ILE B CA 1 ATOM 65 C C . ILE B 1 3 ? -0.948 -3.665 9.966 1.00 3.66 ? 250 ILE B C 1 ATOM 66 O O . ILE B 1 3 ? -1.170 -4.874 10.079 1.00 3.66 ? 250 ILE B O 1 ATOM 67 C CB . ILE B 1 3 ? -3.083 -3.067 8.746 1.00 4.29 ? 250 ILE B CB 1 ATOM 68 C CG1 . ILE B 1 3 ? -3.734 -2.475 7.479 1.00 4.89 ? 250 ILE B CG1 1 ATOM 69 C CG2 . ILE B 1 3 ? -3.706 -2.484 9.994 1.00 5.24 ? 250 ILE B CG2 1 ATOM 70 C CD1 . ILE B 1 3 ? -5.183 -2.929 7.254 1.00 7.08 ? 250 ILE B CD1 1 ATOM 71 N N . LYS B 1 4 ? -0.197 -2.959 10.835 1.00 5.39 ? 251 LYS B N 1 ATOM 72 C CA . LYS B 1 4 ? 0.494 -3.600 11.947 1.00 6.21 ? 251 LYS B CA 1 ATOM 73 C C . LYS B 1 4 ? 0.026 -3.022 13.276 1.00 8.06 ? 251 LYS B C 1 ATOM 74 O O . LYS B 1 4 ? 0.017 -1.804 13.480 1.00 10.19 ? 251 LYS B O 1 ATOM 75 C CB . LYS B 1 4 ? 2.008 -3.438 11.815 1.00 8.03 ? 251 LYS B CB 1 ATOM 76 C CG . LYS B 1 4 ? 2.745 -4.479 12.649 1.00 12.79 ? 251 LYS B CG 1 ATOM 77 C CD . LYS B 1 4 ? 4.194 -4.194 12.926 1.00 18.99 ? 251 LYS B CD 1 ATOM 78 C CE . LYS B 1 4 ? 4.674 -5.076 14.082 1.00 17.68 ? 251 LYS B CE 1 ATOM 79 N NZ . LYS B 1 4 ? 4.032 -4.787 15.405 1.00 19.83 ? 251 LYS B NZ 1 ATOM 80 N N . GLY B 1 5 ? -0.418 -3.904 14.162 1.00 7.60 ? 252 GLY B N 1 ATOM 81 C CA . GLY B 1 5 ? -0.778 -3.561 15.542 1.00 9.94 ? 252 GLY B CA 1 ATOM 82 C C . GLY B 1 5 ? 0.405 -3.579 16.518 1.00 10.08 ? 252 GLY B C 1 ATOM 83 O O . GLY B 1 5 ? 1.582 -3.551 16.119 1.00 11.13 ? 252 GLY B O 1 ATOM 84 N N . ILE B 1 6 ? 0.072 -3.599 17.808 1.00 12.44 ? 253 ILE B N 1 ATOM 85 C CA . ILE B 1 6 ? 1.059 -3.670 18.905 1.00 15.87 ? 253 ILE B CA 1 ATOM 86 C C . ILE B 1 6 ? 1.997 -4.860 18.774 1.00 19.44 ? 253 ILE B C 1 ATOM 87 O O . ILE B 1 6 ? 3.182 -4.740 19.131 1.00 19.64 ? 253 ILE B O 1 ATOM 88 C CB . ILE B 1 6 ? 0.333 -3.682 20.295 1.00 20.87 ? 253 ILE B CB 1 ATOM 89 C CG1 . ILE B 1 6 ? 0.386 -2.308 20.964 1.00 29.72 ? 253 ILE B CG1 1 ATOM 90 C CG2 . ILE B 1 6 ? 0.920 -4.689 21.278 1.00 28.16 ? 253 ILE B CG2 1 ATOM 91 C CD1 . ILE B 1 6 ? 0.094 -1.132 20.064 1.00 30.42 ? 253 ILE B CD1 1 ATOM 92 O OXT . ILE B 1 6 ? 1.602 -5.947 18.342 1.00 18.02 ? 253 ILE B OXT 1 HETATM 93 O O . HOH C 2 . ? 0.151 -2.202 -2.826 1.00 17.33 ? 301 HOH A O 1 HETATM 94 O O . HOH C 2 . ? -1.912 -4.343 -4.277 1.00 24.72 ? 302 HOH A O 1 HETATM 95 O O . HOH C 2 . ? -7.167 1.737 -3.413 1.00 24.57 ? 303 HOH A O 1 HETATM 96 O O . HOH C 2 . ? 3.210 3.640 -1.304 1.00 30.79 ? 304 HOH A O 1 HETATM 97 O O . HOH C 2 . ? 2.553 3.638 -4.708 1.00 26.45 ? 305 HOH A O 1 HETATM 98 O O . HOH D 2 . ? 4.707 -2.584 19.216 1.00 14.41 ? 301 HOH B O 1 HETATM 99 O O . HOH D 2 . ? -1.148 -1.402 -0.805 1.00 9.08 ? 302 HOH B O 1 HETATM 100 O O . HOH D 2 . ? -0.007 -6.592 14.274 1.00 15.56 ? 303 HOH B O 1 HETATM 101 O O . HOH D 2 . ? -0.546 -0.289 15.763 1.00 12.76 ? 304 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 248 248 LEU LEU A . n A 1 2 ILE 2 249 249 ILE ILE A . n A 1 3 ILE 3 250 250 ILE ILE A . n A 1 4 LYS 4 251 251 LYS LYS A . n A 1 5 GLY 5 252 252 GLY GLY A . n A 1 6 ILE 6 253 253 ILE ILE A . n B 1 1 LEU 1 248 248 LEU LEU B . n B 1 2 ILE 2 249 249 ILE ILE B . n B 1 3 ILE 3 250 250 ILE ILE B . n B 1 4 LYS 4 251 251 LYS LYS B . n B 1 5 GLY 5 252 252 GLY GLY B . n B 1 6 ILE 6 253 253 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 301 4 HOH HOH A . C 2 HOH 2 302 5 HOH HOH A . C 2 HOH 3 303 7 HOH HOH A . C 2 HOH 4 304 8 HOH HOH A . C 2 HOH 5 305 9 HOH HOH A . D 2 HOH 1 301 6 HOH HOH B . D 2 HOH 2 302 1 HOH HOH B . D 2 HOH 3 303 2 HOH HOH B . D 2 HOH 4 304 3 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 1 2 A,B,C,D 1 3 A,B,C,D 1 4 A,B,C,D 1 5 A,B,C,D 1 6 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_565 x,y+1,z 1.0000000000 0.0000000000 0.0000000000 2.2392079301 0.0000000000 1.0000000000 0.0000000000 9.3269722765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 1_545 x,y-1,z 1.0000000000 0.0000000000 0.0000000000 -2.2392079301 0.0000000000 1.0000000000 0.0000000000 -9.3269722765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 11.5430000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 1_665 x+1,y+1,z 1.0000000000 0.0000000000 0.0000000000 13.7822079301 0.0000000000 1.0000000000 0.0000000000 9.3269722765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 1_645 x+1,y-1,z 1.0000000000 0.0000000000 0.0000000000 9.3037920699 0.0000000000 1.0000000000 0.0000000000 -9.3269722765 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-02-21 2 'Structure model' 1 1 2018-03-14 3 'Structure model' 1 2 2018-03-28 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2019-11-27 6 'Structure model' 1 5 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' citation 5 5 'Structure model' pdbx_audit_support 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation.year' 8 2 'Structure model' '_citation_author.name' 9 3 'Structure model' '_citation.journal_abbrev' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' 12 4 'Structure model' '_citation.journal_volume' 13 4 'Structure model' '_citation.page_first' 14 4 'Structure model' '_citation.page_last' 15 5 'Structure model' '_pdbx_audit_support.funding_organization' 16 6 'Structure model' '_database_2.pdbx_DOI' 17 6 'Structure model' '_database_2.pdbx_database_accession' # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal GLY N N N N 1 GLY CA C N N 2 GLY C C N N 3 GLY O O N N 4 GLY OXT O N N 5 GLY H H N N 6 GLY H2 H N N 7 GLY HA2 H N N 8 GLY HA3 H N N 9 GLY HXT H N N 10 HOH O O N N 11 HOH H1 H N N 12 HOH H2 H N N 13 ILE N N N N 14 ILE CA C N S 15 ILE C C N N 16 ILE O O N N 17 ILE CB C N S 18 ILE CG1 C N N 19 ILE CG2 C N N 20 ILE CD1 C N N 21 ILE OXT O N N 22 ILE H H N N 23 ILE H2 H N N 24 ILE HA H N N 25 ILE HB H N N 26 ILE HG12 H N N 27 ILE HG13 H N N 28 ILE HG21 H N N 29 ILE HG22 H N N 30 ILE HG23 H N N 31 ILE HD11 H N N 32 ILE HD12 H N N 33 ILE HD13 H N N 34 ILE HXT H N N 35 LEU N N N N 36 LEU CA C N S 37 LEU C C N N 38 LEU O O N N 39 LEU CB C N N 40 LEU CG C N N 41 LEU CD1 C N N 42 LEU CD2 C N N 43 LEU OXT O N N 44 LEU H H N N 45 LEU H2 H N N 46 LEU HA H N N 47 LEU HB2 H N N 48 LEU HB3 H N N 49 LEU HG H N N 50 LEU HD11 H N N 51 LEU HD12 H N N 52 LEU HD13 H N N 53 LEU HD21 H N N 54 LEU HD22 H N N 55 LEU HD23 H N N 56 LEU HXT H N N 57 LYS N N N N 58 LYS CA C N S 59 LYS C C N N 60 LYS O O N N 61 LYS CB C N N 62 LYS CG C N N 63 LYS CD C N N 64 LYS CE C N N 65 LYS NZ N N N 66 LYS OXT O N N 67 LYS H H N N 68 LYS H2 H N N 69 LYS HA H N N 70 LYS HB2 H N N 71 LYS HB3 H N N 72 LYS HG2 H N N 73 LYS HG3 H N N 74 LYS HD2 H N N 75 LYS HD3 H N N 76 LYS HE2 H N N 77 LYS HE3 H N N 78 LYS HZ1 H N N 79 LYS HZ2 H N N 80 LYS HZ3 H N N 81 LYS HXT H N N 82 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal GLY N CA sing N N 1 GLY N H sing N N 2 GLY N H2 sing N N 3 GLY CA C sing N N 4 GLY CA HA2 sing N N 5 GLY CA HA3 sing N N 6 GLY C O doub N N 7 GLY C OXT sing N N 8 GLY OXT HXT sing N N 9 HOH O H1 sing N N 10 HOH O H2 sing N N 11 ILE N CA sing N N 12 ILE N H sing N N 13 ILE N H2 sing N N 14 ILE CA C sing N N 15 ILE CA CB sing N N 16 ILE CA HA sing N N 17 ILE C O doub N N 18 ILE C OXT sing N N 19 ILE CB CG1 sing N N 20 ILE CB CG2 sing N N 21 ILE CB HB sing N N 22 ILE CG1 CD1 sing N N 23 ILE CG1 HG12 sing N N 24 ILE CG1 HG13 sing N N 25 ILE CG2 HG21 sing N N 26 ILE CG2 HG22 sing N N 27 ILE CG2 HG23 sing N N 28 ILE CD1 HD11 sing N N 29 ILE CD1 HD12 sing N N 30 ILE CD1 HD13 sing N N 31 ILE OXT HXT sing N N 32 LEU N CA sing N N 33 LEU N H sing N N 34 LEU N H2 sing N N 35 LEU CA C sing N N 36 LEU CA CB sing N N 37 LEU CA HA sing N N 38 LEU C O doub N N 39 LEU C OXT sing N N 40 LEU CB CG sing N N 41 LEU CB HB2 sing N N 42 LEU CB HB3 sing N N 43 LEU CG CD1 sing N N 44 LEU CG CD2 sing N N 45 LEU CG HG sing N N 46 LEU CD1 HD11 sing N N 47 LEU CD1 HD12 sing N N 48 LEU CD1 HD13 sing N N 49 LEU CD2 HD21 sing N N 50 LEU CD2 HD22 sing N N 51 LEU CD2 HD23 sing N N 52 LEU OXT HXT sing N N 53 LYS N CA sing N N 54 LYS N H sing N N 55 LYS N H2 sing N N 56 LYS CA C sing N N 57 LYS CA CB sing N N 58 LYS CA HA sing N N 59 LYS C O doub N N 60 LYS C OXT sing N N 61 LYS CB CG sing N N 62 LYS CB HB2 sing N N 63 LYS CB HB3 sing N N 64 LYS CG CD sing N N 65 LYS CG HG2 sing N N 66 LYS CG HG3 sing N N 67 LYS CD CE sing N N 68 LYS CD HD2 sing N N 69 LYS CD HD3 sing N N 70 LYS CE NZ sing N N 71 LYS CE HE2 sing N N 72 LYS CE HE3 sing N N 73 LYS NZ HZ1 sing N N 74 LYS NZ HZ2 sing N N 75 LYS NZ HZ3 sing N N 76 LYS OXT HXT sing N N 77 # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'MCB 1616265' _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OMQ _pdbx_initial_refinement_model.details 'PDB entry 2OMQ' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #