data_6ANM # _entry.id 6ANM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ANM pdb_00006anm 10.2210/pdb6anm/pdb WWPDB D_1000229512 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ANM _pdbx_database_status.recvd_initial_deposition_date 2017-08-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cameron, A.J.' 1 ? 'Sarojini, V.' 2 ? 'Squire, C.J.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country DE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem Asian J' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1861-471X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 3195 _citation.page_last 3202 _citation.title 'Crystal and NMR Structures of a Peptidomimetic beta-Turn That Provides Facile Synthesis of 13-Membered Cyclic Tetrapeptides.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/asia.201701422 _citation.pdbx_database_id_PubMed 29098772 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cameron, A.J.' 1 ? primary 'Squire, C.J.' 2 ? primary 'Edwards, P.J.B.' 3 ? primary 'Harjes, E.' 4 ? primary 'Sarojini, V.' 5 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6ANM _cell.details ? _cell.formula_units_Z ? _cell.length_a 12.242 _cell.length_a_esd ? _cell.length_b 15.554 _cell.length_b_esd ? _cell.length_c 26.670 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ANM _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description DLE-DPN-BE2-DAL _entity.formula_weight 468.545 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(D)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DLE)(DPN)(BE2)(DAL)' _entity_poly.pdbx_seq_one_letter_code_can LFXA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DLE n 1 2 DPN n 1 3 BE2 n 1 4 DAL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6ANM _struct_ref.pdbx_db_accession 6ANM _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ANM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 4 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6ANM _struct_ref_seq.db_align_beg 1001 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1004 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1001 _struct_ref_seq.pdbx_auth_seq_align_end 1004 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BE2 'L-peptide linking' . '2-AMINOBENZOIC ACID' ? 'C7 H7 N O2' 137.136 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DPN 'D-peptide linking' . D-PHENYLALANINE ? 'C9 H11 N O2' 165.189 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ANM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 9.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'evaporation from methanol/ethanol mixture' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-05-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.71076 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.71076 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ANM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.64 _reflns.d_resolution_low 13.44 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4820 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.8 _reflns.pdbx_Rmerge_I_obs 0.113 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.033 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.990 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 0.64 _reflns_shell.d_res_low 0.65 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 7.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 54 _reflns_shell.percent_possible_all 15.2 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.123 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.068 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.971 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.03 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] 0.02 _refine.B_iso_max ? _refine.B_iso_mean 3.219 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.987 _refine.correlation_coeff_Fo_to_Fc_free 0.987 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ANM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.64 _refine.ls_d_res_low 13.44 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4569 _refine.ls_number_reflns_R_free 251 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 85.23 _refine.ls_percent_reflns_R_free 5.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.08637 _refine.ls_R_factor_R_free 0.09010 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.08620 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.006 _refine.pdbx_overall_ESU_R_Free 0.006 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.066 _refine.overall_SU_ML 0.003 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 34 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 34 _refine_hist.d_res_high 0.64 _refine_hist.d_res_low 13.44 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.023 0.020 40 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 36 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.330 2.876 50 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.454 3.000 76 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 13.120 5.000 1 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 2.578 0.200 4 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.037 0.020 33 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.013 0.020 16 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.112 0.242 10 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.172 0.247 9 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.909 0.379 9 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.812 0.371 10 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 0.625 0.293 30 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 0.622 0.295 30 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 0.882 0.433 40 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 1.151 3.265 55 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 1.142 3.265 56 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 4.205 3.000 75 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 4.534 5.000 76 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 0.635 _refine_ls_shell.d_res_low 0.652 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 7 _refine_ls_shell.number_reflns_R_work 65 _refine_ls_shell.percent_reflns_obs 17.65 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.224 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.137 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6ANM _struct.title 'Structure of D-Leu-D-Phe-2-Abz-D-Ala at 0.64 Angstrom' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ANM _struct_keywords.text 'unnatural amino acid, peptidomimetic beta-turn, D-amino acid, tetrapeptide, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DLE 1 C ? ? ? 1_555 A DPN 2 N ? ? A DLE 1001 A DPN 1002 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale2 covale both ? A DPN 2 C ? ? ? 1_555 A BE2 3 N ? ? A DPN 1002 A BE2 1003 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale3 covale both ? A BE2 3 C ? ? ? 1_555 A DAL 4 N ? ? A BE2 1003 A DAL 1004 1_555 ? ? ? ? ? ? ? 1.342 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6ANM _atom_sites.fract_transf_matrix[1][1] 0.081686 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.064292 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.037495 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 N N . DLE A 1 1 ? 7.534 6.162 14.887 1.00 1.78 ? 1001 DLE A N 1 HETATM 2 C CA . DLE A 1 1 ? 8.588 5.163 15.176 1.00 3.40 ? 1001 DLE A CA 1 HETATM 3 C CB . DLE A 1 1 ? 8.382 3.955 14.309 1.00 5.48 ? 1001 DLE A CB 1 HETATM 4 C CG . DLE A 1 1 ? 9.461 2.858 14.643 1.00 5.91 ? 1001 DLE A CG 1 HETATM 5 C CD1 . DLE A 1 1 ? 10.903 3.281 14.563 1.00 7.79 ? 1001 DLE A CD1 1 HETATM 6 C CD2 . DLE A 1 1 ? 9.294 1.720 13.686 1.00 9.98 ? 1001 DLE A CD2 1 HETATM 7 C C . DLE A 1 1 ? 8.676 4.759 16.656 1.00 3.12 ? 1001 DLE A C 1 HETATM 8 O O . DLE A 1 1 ? 9.768 4.698 17.220 1.00 5.07 ? 1001 DLE A O 1 HETATM 9 H H1 . DLE A 1 1 ? 7.497 6.841 15.635 1.00 1.70 ? 1001 DLE A H1 1 HETATM 10 H H2 . DLE A 1 1 ? 6.684 5.727 14.812 1.00 1.66 ? 1001 DLE A H2 1 HETATM 11 H H3 . DLE A 1 1 ? 7.736 6.610 14.062 1.00 1.77 ? 1001 DLE A H3 1 HETATM 12 H HA . DLE A 1 1 ? 9.548 5.619 14.897 1.00 3.03 ? 1001 DLE A HA 1 HETATM 13 H HB2 . DLE A 1 1 ? 8.466 4.229 13.258 1.00 4.91 ? 1001 DLE A HB2 1 HETATM 14 H HB3 . DLE A 1 1 ? 7.385 3.541 14.474 1.00 5.44 ? 1001 DLE A HB3 1 HETATM 15 H HG . DLE A 1 1 ? 9.267 2.445 15.641 1.00 6.68 ? 1001 DLE A HG 1 HETATM 16 H HD11 . DLE A 1 1 ? 11.529 2.428 14.622 1.00 5.35 ? 1001 DLE A HD11 1 HETATM 17 H HD12 . DLE A 1 1 ? 11.070 3.770 13.639 1.00 6.31 ? 1001 DLE A HD12 1 HETATM 18 H HD13 . DLE A 1 1 ? 11.154 3.938 15.350 1.00 7.43 ? 1001 DLE A HD13 1 HETATM 19 H HD21 . DLE A 1 1 ? 8.269 1.461 13.621 1.00 9.62 ? 1001 DLE A HD21 1 HETATM 20 H HD22 . DLE A 1 1 ? 9.646 2.004 12.728 1.00 9.37 ? 1001 DLE A HD22 1 HETATM 21 H HD23 . DLE A 1 1 ? 9.846 0.884 14.031 1.00 7.94 ? 1001 DLE A HD23 1 HETATM 22 N N . DPN A 1 2 ? 7.527 4.379 17.253 1.00 1.90 ? 1002 DPN A N 1 HETATM 23 C CA . DPN A 1 2 ? 7.608 3.716 18.553 1.00 1.74 ? 1002 DPN A CA 1 HETATM 24 C C . DPN A 1 2 ? 7.926 4.667 19.715 1.00 1.88 ? 1002 DPN A C 1 HETATM 25 O O . DPN A 1 2 ? 8.337 4.213 20.778 1.00 2.73 ? 1002 DPN A O 1 HETATM 26 C CB . DPN A 1 2 ? 6.309 2.950 18.812 1.00 1.97 ? 1002 DPN A CB 1 HETATM 27 C CG A DPN A 1 2 ? 6.153 1.789 17.797 0.50 2.16 ? 1002 DPN A CG 1 HETATM 28 C CG B DPN A 1 2 ? 6.377 1.918 19.919 0.50 1.79 ? 1002 DPN A CG 1 HETATM 29 C CD1 A DPN A 1 2 ? 5.030 1.708 16.967 0.50 3.76 ? 1002 DPN A CD1 1 HETATM 30 C CD1 B DPN A 1 2 ? 7.191 0.797 19.759 0.50 1.83 ? 1002 DPN A CD1 1 HETATM 31 C CD2 A DPN A 1 2 ? 7.118 0.767 17.722 0.50 2.45 ? 1002 DPN A CD2 1 HETATM 32 C CD2 B DPN A 1 2 ? 5.586 2.011 21.066 0.50 2.49 ? 1002 DPN A CD2 1 HETATM 33 C CE1 A DPN A 1 2 ? 4.861 0.645 16.085 0.50 4.73 ? 1002 DPN A CE1 1 HETATM 34 C CE1 B DPN A 1 2 ? 7.222 -0.200 20.730 0.50 2.03 ? 1002 DPN A CE1 1 HETATM 35 C CE2 A DPN A 1 2 ? 6.987 -0.256 16.789 0.50 3.06 ? 1002 DPN A CE2 1 HETATM 36 C CE2 B DPN A 1 2 ? 5.625 1.030 22.046 0.50 2.91 ? 1002 DPN A CE2 1 HETATM 37 C CZ A DPN A 1 2 ? 5.850 -0.315 15.959 0.50 4.29 ? 1002 DPN A CZ 1 HETATM 38 C CZ B DPN A 1 2 ? 6.431 -0.086 21.893 0.50 2.60 ? 1002 DPN A CZ 1 HETATM 39 H H . DPN A 1 2 ? 6.599 4.517 16.879 1.00 1.88 ? 1002 DPN A H 1 HETATM 40 H HA . DPN A 1 2 ? 8.422 2.991 18.520 1.00 1.74 ? 1002 DPN A HA 1 HETATM 41 H HB2 . DPN A 1 2 ? 5.425 3.583 18.863 1.00 1.95 ? 1002 DPN A HB2 1 HETATM 42 H HD1 A DPN A 1 2 ? 4.263 2.466 17.041 0.50 3.31 ? 1002 DPN A HD1 1 HETATM 43 H HD1 B DPN A 1 2 ? 7.789 0.691 18.862 0.50 1.92 ? 1002 DPN A HD1 1 HETATM 44 H HD2 A DPN A 1 2 ? 8.005 0.813 18.337 0.50 2.51 ? 1002 DPN A HD2 1 HETATM 45 H HD2 B DPN A 1 2 ? 4.947 2.874 21.180 0.50 2.35 ? 1002 DPN A HD2 1 HETATM 46 H HE1 A DPN A 1 2 ? 3.997 0.617 15.433 0.50 3.63 ? 1002 DPN A HE1 1 HETATM 47 H HE1 B DPN A 1 2 ? 7.869 -1.058 20.604 0.50 2.12 ? 1002 DPN A HE1 1 HETATM 48 H HE2 A DPN A 1 2 ? 7.742 -1.031 16.728 0.50 3.20 ? 1002 DPN A HE2 1 HETATM 49 H HE2 B DPN A 1 2 ? 5.020 1.123 22.938 0.50 2.53 ? 1002 DPN A HE2 1 HETATM 50 H HZ A DPN A 1 2 ? 5.726 -1.136 15.264 0.50 3.77 ? 1002 DPN A HZ 1 HETATM 51 H HZ B DPN A 1 2 ? 6.473 -0.845 22.665 0.50 2.08 ? 1002 DPN A HZ 1 HETATM 52 C C . BE2 A 1 3 ? 8.171 8.516 18.235 1.00 1.92 ? 1003 BE2 A C 1 HETATM 53 O O . BE2 A 1 3 ? 7.792 7.656 17.409 1.00 2.29 ? 1003 BE2 A O 1 HETATM 54 C C1 . BE2 A 1 3 ? 7.941 8.368 19.705 1.00 1.96 ? 1003 BE2 A C1 1 HETATM 55 C CA . BE2 A 1 3 ? 7.814 7.083 20.291 1.00 1.86 ? 1003 BE2 A CA 1 HETATM 56 C C3 . BE2 A 1 3 ? 7.771 6.963 21.687 1.00 2.19 ? 1003 BE2 A C3 1 HETATM 57 N N . BE2 A 1 3 ? 7.701 5.972 19.444 1.00 1.88 ? 1003 BE2 A N 1 HETATM 58 C C4 . BE2 A 1 3 ? 7.745 8.095 22.478 1.00 2.51 ? 1003 BE2 A C4 1 HETATM 59 C C5 . BE2 A 1 3 ? 7.758 9.361 21.915 1.00 2.41 ? 1003 BE2 A C5 1 HETATM 60 C C6 . BE2 A 1 3 ? 7.881 9.491 20.533 1.00 2.18 ? 1003 BE2 A C6 1 HETATM 61 H H3 . BE2 A 1 3 ? 7.580 6.012 22.163 1.00 2.13 ? 1003 BE2 A H3 1 HETATM 62 H H . BE2 A 1 3 ? 7.826 6.210 18.487 1.00 1.91 ? 1003 BE2 A H 1 HETATM 63 H H4 . BE2 A 1 3 ? 7.599 7.992 23.547 1.00 2.38 ? 1003 BE2 A H4 1 HETATM 64 H H5 . BE2 A 1 3 ? 7.826 10.231 22.550 1.00 2.23 ? 1003 BE2 A H5 1 HETATM 65 H H6 . BE2 A 1 3 ? 8.041 10.480 20.128 1.00 2.17 ? 1003 BE2 A H6 1 HETATM 66 N N . DAL A 1 4 ? 8.837 9.606 17.825 1.00 2.09 ? 1004 DAL A N 1 HETATM 67 C CA . DAL A 1 4 ? 9.233 9.687 16.427 1.00 2.09 ? 1004 DAL A CA 1 HETATM 68 C CB . DAL A 1 4 ? 10.091 10.931 16.195 1.00 2.95 ? 1004 DAL A CB 1 HETATM 69 C C . DAL A 1 4 ? 8.002 9.711 15.500 1.00 1.91 ? 1004 DAL A C 1 HETATM 70 O O . DAL A 1 4 ? 8.065 8.974 14.478 1.00 2.98 ? 1004 DAL A O 1 HETATM 71 O OXT . DAL A 1 4 ? 7.055 10.476 15.784 1.00 2.27 ? 1004 DAL A OXT 1 HETATM 72 H H . DAL A 1 4 ? 9.283 10.304 18.317 1.00 1.98 ? 1004 DAL A H 1 HETATM 73 H HA . DAL A 1 4 ? 9.857 8.820 16.155 1.00 2.10 ? 1004 DAL A HA 1 HETATM 74 H HB1 . DAL A 1 4 ? 9.590 11.793 16.566 1.00 2.92 ? 1004 DAL A HB1 1 HETATM 75 H HB2 . DAL A 1 4 ? 11.023 10.816 16.698 1.00 2.75 ? 1004 DAL A HB2 1 HETATM 76 H HB3 . DAL A 1 4 ? 10.263 11.045 15.150 1.00 2.74 ? 1004 DAL A HB3 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 N N . DLE A 1 ? 0.0330 0.0176 0.0171 0.0009 0.0024 0.0003 1001 DLE A N 2 C CA . DLE A 1 ? 0.0552 0.0360 0.0380 0.0236 0.0255 0.0233 1001 DLE A CA 3 C CB . DLE A 1 ? 0.1471 0.0253 0.0355 0.0302 0.0394 0.0095 1001 DLE A CB 4 C CG . DLE A 1 ? 0.1352 0.0399 0.0493 0.0373 0.0354 0.0106 1001 DLE A CG 5 C CD1 . DLE A 1 ? 0.1187 0.1012 0.0759 0.0704 0.0504 0.0395 1001 DLE A CD1 6 C CD2 . DLE A 1 ? 0.2627 0.0450 0.0712 0.0658 0.0188 -0.0072 1001 DLE A CD2 7 C C . DLE A 1 ? 0.0382 0.0368 0.0432 0.0147 0.0170 0.0250 1001 DLE A C 8 O O . DLE A 1 ? 0.0346 0.0815 0.0763 0.0186 0.0143 0.0565 1001 DLE A O 9 H H1 . DLE A 1 ? 0.0288 0.0185 0.0170 0.0047 0.0059 0.0004 1001 DLE A H1 10 H H2 . DLE A 1 ? 0.0272 0.0182 0.0173 0.0056 0.0061 0.0033 1001 DLE A H2 11 H H3 . DLE A 1 ? 0.0291 0.0181 0.0199 0.0047 0.0055 0.0023 1001 DLE A H3 12 H HA . DLE A 1 ? 0.0559 0.0286 0.0306 0.0153 0.0151 0.0134 1001 DLE A HA 13 H HB2 . DLE A 1 ? 0.1087 0.0326 0.0453 0.0290 0.0364 0.0255 1001 DLE A HB2 14 H HB3 . DLE A 1 ? 0.1250 0.0391 0.0423 0.0376 0.0276 0.0138 1001 DLE A HB3 15 H HG . DLE A 1 ? 0.1506 0.0511 0.0519 0.0417 0.0374 0.0165 1001 DLE A HG 16 H HD11 . DLE A 1 ? 0.0626 0.0659 0.0745 0.0251 0.0383 0.0330 1001 DLE A HD11 17 H HD12 . DLE A 1 ? 0.1036 0.0620 0.0741 0.0437 0.0387 0.0259 1001 DLE A HD12 18 H HD13 . DLE A 1 ? 0.1036 0.0847 0.0940 0.0471 0.0408 0.0380 1001 DLE A HD13 19 H HD21 . DLE A 1 ? 0.2424 0.0543 0.0688 0.0642 0.0281 0.0059 1001 DLE A HD21 20 H HD22 . DLE A 1 ? 0.2024 0.0541 0.0994 0.0537 0.0305 0.0097 1001 DLE A HD22 21 H HD23 . DLE A 1 ? 0.1772 0.0539 0.0705 0.0478 0.0305 0.0113 1001 DLE A HD23 22 N N . DPN A 2 ? 0.0330 0.0203 0.0186 0.0031 0.0034 0.0038 1002 DPN A N 23 C CA . DPN A 2 ? 0.0283 0.0178 0.0200 0.0020 0.0020 0.0054 1002 DPN A CA 24 C C . DPN A 2 ? 0.0273 0.0232 0.0209 0.0002 -0.0009 0.0062 1002 DPN A C 25 O O . DPN A 2 ? 0.0503 0.0298 0.0236 0.0067 -0.0061 0.0081 1002 DPN A O 26 C CB . DPN A 2 ? 0.0310 0.0219 0.0219 -0.0001 0.0004 0.0035 1002 DPN A CB 27 C CG A DPN A 2 ? 0.0380 0.0194 0.0243 -0.0003 -0.0002 0.0057 1002 DPN A CG 28 C CG B DPN A 2 ? 0.0239 0.0212 0.0227 -0.0030 -0.0039 0.0022 1002 DPN A CG 29 C CD1 A DPN A 2 ? 0.0625 0.0340 0.0462 0.0074 -0.0246 -0.0004 1002 DPN A CD1 30 C CD1 B DPN A 2 ? 0.0277 0.0186 0.0231 -0.0013 -0.0068 0.0013 1002 DPN A CD1 31 C CD2 A DPN A 2 ? 0.0362 0.0267 0.0300 -0.0019 0.0070 0.0008 1002 DPN A CD2 32 C CD2 B DPN A 2 ? 0.0333 0.0303 0.0309 0.0016 0.0050 0.0069 1002 DPN A CD2 33 C CE1 A DPN A 2 ? 0.0768 0.0502 0.0524 0.0018 -0.0338 -0.0069 1002 DPN A CE1 34 C CE1 B DPN A 2 ? 0.0255 0.0198 0.0317 -0.0037 -0.0073 0.0051 1002 DPN A CE1 35 C CE2 A DPN A 2 ? 0.0559 0.0297 0.0305 -0.0086 0.0116 -0.0043 1002 DPN A CE2 36 C CE2 B DPN A 2 ? 0.0382 0.0366 0.0355 -0.0010 0.0113 0.0111 1002 DPN A CE2 37 C CZ A DPN A 2 ? 0.0803 0.0396 0.0429 -0.0076 -0.0121 -0.0096 1002 DPN A CZ 38 C CZ B DPN A 2 ? 0.0315 0.0295 0.0375 -0.0050 -0.0013 0.0153 1002 DPN A CZ 39 H H . DPN A 2 ? 0.0308 0.0199 0.0206 0.0036 0.0059 0.0069 1002 DPN A H 40 H HA . DPN A 2 ? 0.0254 0.0199 0.0207 0.0012 0.0017 0.0052 1002 DPN A HA 41 H HB2 . DPN A 2 ? 0.0295 0.0222 0.0224 -0.0008 -0.0001 0.0038 1002 DPN A HB2 42 H HD1 A DPN A 2 ? 0.0517 0.0362 0.0379 0.0020 -0.0154 0.0002 1002 DPN A HD1 43 H HD1 B DPN A 2 ? 0.0266 0.0201 0.0261 -0.0023 -0.0046 0.0024 1002 DPN A HD1 44 H HD2 A DPN A 2 ? 0.0392 0.0256 0.0302 -0.0024 0.0047 0.0011 1002 DPN A HD2 45 H HD2 B DPN A 2 ? 0.0302 0.0299 0.0290 0.0000 0.0029 0.0056 1002 DPN A HD2 46 H HE1 A DPN A 2 ? 0.0526 0.0417 0.0435 0.0006 -0.0143 -0.0048 1002 DPN A HE1 47 H HE1 B DPN A 2 ? 0.0258 0.0239 0.0307 -0.0014 -0.0050 0.0056 1002 DPN A HE1 48 H HE2 A DPN A 2 ? 0.0526 0.0361 0.0326 -0.0061 0.0047 -0.0033 1002 DPN A HE2 49 H HE2 B DPN A 2 ? 0.0319 0.0323 0.0317 -0.0012 0.0058 0.0099 1002 DPN A HE2 50 H HZ A DPN A 2 ? 0.0693 0.0372 0.0367 -0.0051 -0.0085 -0.0065 1002 DPN A HZ 51 H HZ B DPN A 2 ? 0.0298 0.0234 0.0258 -0.0037 -0.0002 0.0064 1002 DPN A HZ 52 C C . BE2 A 3 ? 0.0359 0.0189 0.0181 -0.0037 -0.0112 0.0020 1003 BE2 A C 53 O O . BE2 A 3 ? 0.0496 0.0195 0.0179 -0.0066 -0.0131 0.0013 1003 BE2 A O 54 C C1 . BE2 A 3 ? 0.0327 0.0229 0.0187 -0.0083 -0.0079 0.0010 1003 BE2 A C1 55 C CA . BE2 A 3 ? 0.0281 0.0234 0.0192 -0.0067 -0.0064 0.0011 1003 BE2 A CA 56 C C3 . BE2 A 3 ? 0.0325 0.0318 0.0189 -0.0072 -0.0016 0.0041 1003 BE2 A C3 57 N N . BE2 A 3 ? 0.0325 0.0191 0.0199 -0.0025 -0.0068 0.0033 1003 BE2 A N 58 C C4 . BE2 A 3 ? 0.0351 0.0392 0.0209 -0.0101 0.0011 -0.0003 1003 BE2 A C4 59 C C5 . BE2 A 3 ? 0.0321 0.0347 0.0245 -0.0125 0.0009 -0.0080 1003 BE2 A C5 60 C C6 . BE2 A 3 ? 0.0328 0.0257 0.0243 -0.0087 -0.0042 -0.0021 1003 BE2 A C6 61 H H3 . BE2 A 3 ? 0.0320 0.0284 0.0204 -0.0068 -0.0026 0.0014 1003 BE2 A H3 62 H H . BE2 A 3 ? 0.0308 0.0212 0.0204 -0.0033 -0.0050 0.0034 1003 BE2 A H 63 H H4 . BE2 A 3 ? 0.0332 0.0349 0.0222 -0.0096 0.0027 0.0012 1003 BE2 A H4 64 H H5 . BE2 A 3 ? 0.0327 0.0285 0.0232 -0.0104 -0.0007 -0.0033 1003 BE2 A H5 65 H H6 . BE2 A 3 ? 0.0327 0.0273 0.0225 -0.0087 -0.0041 -0.0007 1003 BE2 A H6 66 N N . DAL A 4 ? 0.0405 0.0220 0.0168 -0.0073 -0.0104 0.0014 1004 DAL A N 67 C CA . DAL A 4 ? 0.0357 0.0251 0.0183 -0.0015 -0.0054 0.0016 1004 DAL A CA 68 C CB . DAL A 4 ? 0.0449 0.0417 0.0255 -0.0155 -0.0044 0.0057 1004 DAL A CB 69 C C . DAL A 4 ? 0.0406 0.0176 0.0143 -0.0053 -0.0060 0.0021 1004 DAL A C 70 O O . DAL A 4 ? 0.0728 0.0221 0.0182 0.0005 -0.0156 -0.0019 1004 DAL A O 71 O OXT . DAL A 4 ? 0.0339 0.0310 0.0213 -0.0047 -0.0037 0.0013 1004 DAL A OXT 72 H H . DAL A 4 ? 0.0360 0.0212 0.0180 -0.0057 -0.0089 0.0005 1004 DAL A H 73 H HA . DAL A 4 ? 0.0373 0.0243 0.0182 -0.0024 -0.0058 0.0010 1004 DAL A HA 74 H HB1 . DAL A 4 ? 0.0426 0.0427 0.0257 -0.0120 -0.0046 0.0068 1004 DAL A HB1 75 H HB2 . DAL A 4 ? 0.0407 0.0367 0.0269 -0.0108 -0.0004 0.0045 1004 DAL A HB2 76 H HB3 . DAL A 4 ? 0.0406 0.0361 0.0272 -0.0103 -0.0008 0.0069 1004 DAL A HB3 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DLE 1 1001 1001 DLE DLE A . n A 1 2 DPN 2 1002 1002 DPN DPN A . n A 1 3 BE2 3 1003 1003 BE2 BE2 A . n A 1 4 DAL 4 1004 1004 DAL DAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-15 2 'Structure model' 1 1 2017-12-06 3 'Structure model' 1 2 2018-01-03 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' atom_site 4 4 'Structure model' atom_site_anisotrop 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_validate_main_chain_plane 9 4 'Structure model' pdbx_validate_rmsd_angle 10 4 'Structure model' pdbx_validate_torsion 11 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.title' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.label_atom_id' 7 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 8 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXS ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 BE2 _pdbx_validate_rmsd_angle.auth_seq_id_1 1003 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 BE2 _pdbx_validate_rmsd_angle.auth_seq_id_2 1003 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DAL _pdbx_validate_rmsd_angle.auth_seq_id_3 1004 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 141.09 _pdbx_validate_rmsd_angle.angle_target_value 117.20 _pdbx_validate_rmsd_angle.angle_deviation 23.89 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag Y # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id BE2 _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1003 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 155.40 _pdbx_validate_torsion.psi -146.47 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id BE2 _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 1003 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -13.43 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BE2 C C N N 1 BE2 O O N N 2 BE2 OXT O N N 3 BE2 C1 C Y N 4 BE2 CA C Y N 5 BE2 C3 C Y N 6 BE2 N N N N 7 BE2 C4 C Y N 8 BE2 C5 C Y N 9 BE2 C6 C Y N 10 BE2 HXT H N N 11 BE2 H3 H N N 12 BE2 H H N N 13 BE2 H2 H N N 14 BE2 H4 H N N 15 BE2 H5 H N N 16 BE2 H6 H N N 17 DAL N N N N 18 DAL CA C N R 19 DAL CB C N N 20 DAL C C N N 21 DAL O O N N 22 DAL OXT O N N 23 DAL H H N N 24 DAL H2 H N N 25 DAL HA H N N 26 DAL HB1 H N N 27 DAL HB2 H N N 28 DAL HB3 H N N 29 DAL HXT H N N 30 DLE N N N N 31 DLE CA C N R 32 DLE CB C N N 33 DLE CG C N N 34 DLE CD1 C N N 35 DLE CD2 C N N 36 DLE C C N N 37 DLE O O N N 38 DLE OXT O N N 39 DLE H H N N 40 DLE H2 H N N 41 DLE HA H N N 42 DLE HB2 H N N 43 DLE HB3 H N N 44 DLE HG H N N 45 DLE HD11 H N N 46 DLE HD12 H N N 47 DLE HD13 H N N 48 DLE HD21 H N N 49 DLE HD22 H N N 50 DLE HD23 H N N 51 DLE HXT H N N 52 DPN N N N N 53 DPN CA C N R 54 DPN C C N N 55 DPN O O N N 56 DPN OXT O N N 57 DPN CB C N N 58 DPN CG C Y N 59 DPN CD1 C Y N 60 DPN CD2 C Y N 61 DPN CE1 C Y N 62 DPN CE2 C Y N 63 DPN CZ C Y N 64 DPN H H N N 65 DPN H2 H N N 66 DPN HA H N N 67 DPN HXT H N N 68 DPN HB2 H N N 69 DPN HB3 H N N 70 DPN HD1 H N N 71 DPN HD2 H N N 72 DPN HE1 H N N 73 DPN HE2 H N N 74 DPN HZ H N N 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BE2 C O doub N N 1 BE2 C OXT sing N N 2 BE2 C C1 sing N N 3 BE2 OXT HXT sing N N 4 BE2 C1 CA doub Y N 5 BE2 C1 C6 sing Y N 6 BE2 CA C3 sing Y N 7 BE2 CA N sing N N 8 BE2 C3 C4 doub Y N 9 BE2 C3 H3 sing N N 10 BE2 N H sing N N 11 BE2 N H2 sing N N 12 BE2 C4 C5 sing Y N 13 BE2 C4 H4 sing N N 14 BE2 C5 C6 doub Y N 15 BE2 C5 H5 sing N N 16 BE2 C6 H6 sing N N 17 DAL N CA sing N N 18 DAL N H sing N N 19 DAL N H2 sing N N 20 DAL CA CB sing N N 21 DAL CA C sing N N 22 DAL CA HA sing N N 23 DAL CB HB1 sing N N 24 DAL CB HB2 sing N N 25 DAL CB HB3 sing N N 26 DAL C O doub N N 27 DAL C OXT sing N N 28 DAL OXT HXT sing N N 29 DLE N CA sing N N 30 DLE N H sing N N 31 DLE N H2 sing N N 32 DLE CA CB sing N N 33 DLE CA C sing N N 34 DLE CA HA sing N N 35 DLE CB CG sing N N 36 DLE CB HB2 sing N N 37 DLE CB HB3 sing N N 38 DLE CG CD1 sing N N 39 DLE CG CD2 sing N N 40 DLE CG HG sing N N 41 DLE CD1 HD11 sing N N 42 DLE CD1 HD12 sing N N 43 DLE CD1 HD13 sing N N 44 DLE CD2 HD21 sing N N 45 DLE CD2 HD22 sing N N 46 DLE CD2 HD23 sing N N 47 DLE C O doub N N 48 DLE C OXT sing N N 49 DLE OXT HXT sing N N 50 DPN N CA sing N N 51 DPN N H sing N N 52 DPN N H2 sing N N 53 DPN CA C sing N N 54 DPN CA CB sing N N 55 DPN CA HA sing N N 56 DPN C O doub N N 57 DPN C OXT sing N N 58 DPN OXT HXT sing N N 59 DPN CB CG sing N N 60 DPN CB HB2 sing N N 61 DPN CB HB3 sing N N 62 DPN CG CD1 doub Y N 63 DPN CG CD2 sing Y N 64 DPN CD1 CE1 sing Y N 65 DPN CD1 HD1 sing N N 66 DPN CD2 CE2 doub Y N 67 DPN CD2 HD2 sing N N 68 DPN CE1 CZ doub Y N 69 DPN CE1 HE1 sing N N 70 DPN CE2 CZ sing Y N 71 DPN CE2 HE2 sing N N 72 DPN CZ HZ sing N N 73 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BE2 ? ? BE2 ? ? 'SUBJECT OF INVESTIGATION' ? 2 DAL ? ? DAL ? ? 'SUBJECT OF INVESTIGATION' ? 3 DLE ? ? DLE ? ? 'SUBJECT OF INVESTIGATION' ? 4 DPN ? ? DPN ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #