data_6DL0 # _entry.id 6DL0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.374 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6DL0 pdb_00006dl0 10.2210/pdb6dl0/pdb WWPDB D_1000234835 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DL0 _pdbx_database_status.recvd_initial_deposition_date 2018-05-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, C.K.' 1 ? 'King, G.J.' 2 ? 'Ramalho, S.D.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Nat. Prod.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-6025 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 81 _citation.language ? _citation.page_first 2436 _citation.page_last 2445 _citation.title 'Synthesis, Racemic X-ray Crystallographic, and Permeability Studies of Bioactive Orbitides from Jatropha Species.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jnatprod.8b00447 _citation.pdbx_database_id_PubMed 30345754 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramalho, S.D.' 1 0000-0001-5314-4487 primary 'Wang, C.K.' 2 0000-0002-7973-7632 primary 'King, G.J.' 3 ? primary 'Byriel, K.A.' 4 ? primary 'Huang, Y.H.' 5 0000-0001-6937-2660 primary 'Bolzani, V.S.' 6 0000-0001-7019-5825 primary 'Craik, D.J.' 7 0000-0003-0007-6796 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6DL0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 41.235 _cell.length_a_esd ? _cell.length_b 21.600 _cell.length_b_esd ? _cell.length_c 10.222 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 61 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P b c a' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'pohlianin C' 810.938 1 ? ? ? ? 2 water nat water 18.015 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TIIFGFGG _entity_poly.pdbx_seq_one_letter_code_can TIIFGFGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ILE n 1 3 ILE n 1 4 PHE n 1 5 GLY n 1 6 PHE n 1 7 GLY n 1 8 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Jatropha pohliana' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 3995 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6DL0 _struct_ref.pdbx_db_accession 6DL0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6DL0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6DL0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DL0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 12.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '28% v/v propanol, 0.1 M bis-tris (pH 6.5) and 3% w/v polyethylene glycol 200' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-08-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9537 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6DL0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.20 _reflns.d_resolution_low 41.30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2957 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.163 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DL0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.200 _refine.ls_d_res_low 10.800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 2592 _refine.ls_number_reflns_R_free 259 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.78 _refine.ls_percent_reflns_R_free 9.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1213 _refine.ls_R_factor_R_free 0.1262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1208 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 8.89 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.05 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 57 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 58 _refine_hist.d_res_high 1.200 _refine_hist.d_res_low 10.800 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 ? 58 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.253 ? 76 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 9.629 ? 16 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.096 ? 8 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.014 ? 9 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.2001 1.5114 . . 121 1102 88.00 . . . 0.1920 . 0.1794 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5114 10.8004 . . 138 1231 99.00 . . . 0.1056 . 0.1004 . . . . . . . . . . # _struct.entry_id 6DL0 _struct.title 'Crystal structure of pohlianin C, an orbitide from Jatropha pohliana' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DL0 _struct_keywords.text 'cyclic peptide, PLANT PROTEIN' _struct_keywords.pdbx_keywords 'PLANT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id THR _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id N _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id GLY _struct_conn.ptnr2_label_seq_id 8 _struct_conn.ptnr2_label_atom_id C _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id THR _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id GLY _struct_conn.ptnr2_auth_seq_id 8 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.435 _struct_conn.pdbx_value_order sing _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6DL0 _atom_sites.fract_transf_matrix[1][1] 0.024251 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.046296 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.097828 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . THR A 1 1 ? -1.081 -2.608 -0.070 1.00 4.85 ? 1 THR A N 1 ATOM 2 C CA . THR A 1 1 ? -1.527 -1.201 0.021 1.00 5.20 ? 1 THR A CA 1 ATOM 3 C C . THR A 1 1 ? -2.634 -1.143 1.089 1.00 4.86 ? 1 THR A C 1 ATOM 4 O O . THR A 1 1 ? -3.124 -2.159 1.502 1.00 5.40 ? 1 THR A O 1 ATOM 5 C CB . THR A 1 1 ? -2.076 -0.649 -1.321 1.00 4.94 ? 1 THR A CB 1 ATOM 6 O OG1 . THR A 1 1 ? -3.433 -1.087 -1.489 1.00 5.22 ? 1 THR A OG1 1 ATOM 7 C CG2 . THR A 1 1 ? -1.184 -1.031 -2.532 1.00 6.00 ? 1 THR A CG2 1 ATOM 8 H H . THR A 1 1 ? -1.582 -3.112 -0.447 1.00 5.82 ? 1 THR A H 1 ATOM 9 H HA . THR A 1 1 ? -0.788 -0.683 0.312 1.00 6.24 ? 1 THR A HA 1 ATOM 10 H HB . THR A 1 1 ? -2.115 0.286 -1.293 1.00 5.92 ? 1 THR A HB 1 ATOM 11 H HG1 . THR A 1 1 ? -3.463 -1.824 -1.469 1.00 6.27 ? 1 THR A HG1 1 ATOM 12 H HG21 . THR A 1 1 ? -1.515 -0.631 -3.312 1.00 7.20 ? 1 THR A HG21 1 ATOM 13 H HG22 . THR A 1 1 ? -0.305 -0.745 -2.391 1.00 7.20 ? 1 THR A HG22 1 ATOM 14 H HG23 . THR A 1 1 ? -1.192 -1.957 -2.650 1.00 7.20 ? 1 THR A HG23 1 ATOM 15 N N . ILE A 1 2 ? -3.002 0.082 1.443 1.00 4.99 ? 2 ILE A N 1 ATOM 16 C CA . ILE A 1 2 ? -4.162 0.375 2.266 1.00 4.91 ? 2 ILE A CA 1 ATOM 17 C C . ILE A 1 2 ? -5.387 0.762 1.443 1.00 5.66 ? 2 ILE A C 1 ATOM 18 O O . ILE A 1 2 ? -6.336 1.263 2.013 1.00 6.69 ? 2 ILE A O 1 ATOM 19 C CB . ILE A 1 2 ? -3.827 1.416 3.378 1.00 6.22 ? 2 ILE A CB 1 ATOM 20 C CG1 . ILE A 1 2 ? -3.410 2.732 2.774 1.00 7.76 ? 2 ILE A CG1 1 ATOM 21 C CG2 . ILE A 1 2 ? -2.788 0.832 4.359 1.00 8.29 ? 2 ILE A CG2 1 ATOM 22 C CD1 . ILE A 1 2 ? -3.312 3.871 3.759 1.00 10.97 ? 2 ILE A CD1 1 ATOM 23 H H . ILE A 1 2 ? -2.666 0.707 1.065 1.00 5.99 ? 2 ILE A H 1 ATOM 24 H HA . ILE A 1 2 ? -4.353 -0.446 2.701 1.00 5.89 ? 2 ILE A HA 1 ATOM 25 H HB . ILE A 1 2 ? -4.625 1.561 3.854 1.00 7.47 ? 2 ILE A HB 1 ATOM 26 H HG12 . ILE A 1 2 ? -2.557 2.627 2.374 1.00 9.31 ? 2 ILE A HG12 1 ATOM 27 H HG13 . ILE A 1 2 ? -4.035 2.986 2.104 1.00 9.31 ? 2 ILE A HG13 1 ATOM 28 H HG21 . ILE A 1 2 ? -2.695 1.413 5.090 1.00 9.95 ? 2 ILE A HG21 1 ATOM 29 H HG22 . ILE A 1 2 ? -3.091 0.001 4.659 1.00 9.95 ? 2 ILE A HG22 1 ATOM 30 H HG23 . ILE A 1 2 ? -1.969 0.760 3.918 1.00 9.95 ? 2 ILE A HG23 1 ATOM 31 H HD11 . ILE A 1 2 ? -2.689 3.643 4.430 1.00 13.16 ? 2 ILE A HD11 1 ATOM 32 H HD12 . ILE A 1 2 ? -3.042 4.663 3.320 1.00 13.16 ? 2 ILE A HD12 1 ATOM 33 H HD13 . ILE A 1 2 ? -4.156 3.998 4.163 1.00 13.16 ? 2 ILE A HD13 1 ATOM 34 N N . ILE A 1 3 ? -5.418 0.280 0.210 1.00 5.31 ? 3 ILE A N 1 ATOM 35 C CA . ILE A 1 3 ? -6.565 0.414 -0.660 1.00 5.38 ? 3 ILE A CA 1 ATOM 36 C C . ILE A 1 3 ? -7.220 -0.949 -0.780 1.00 5.44 ? 3 ILE A C 1 ATOM 37 O O . ILE A 1 3 ? -6.602 -1.915 -1.236 1.00 5.17 ? 3 ILE A O 1 ATOM 38 C CB . ILE A 1 3 ? -6.149 0.920 -2.042 1.00 6.61 ? 3 ILE A CB 1 ATOM 39 C CG1 . ILE A 1 3 ? -5.417 2.260 -1.886 1.00 9.44 ? 3 ILE A CG1 1 ATOM 40 C CG2 . ILE A 1 3 ? -7.388 1.086 -2.926 1.00 7.30 ? 3 ILE A CG2 1 ATOM 41 C CD1 . ILE A 1 3 ? -4.841 2.741 -3.140 1.00 13.30 ? 3 ILE A CD1 1 ATOM 42 H H . ILE A 1 3 ? -4.750 -0.107 -0.168 1.00 6.37 ? 3 ILE A H 1 ATOM 43 H HA . ILE A 1 3 ? -7.201 1.037 -0.275 1.00 6.45 ? 3 ILE A HA 1 ATOM 44 H HB . ILE A 1 3 ? -5.550 0.276 -2.450 1.00 7.93 ? 3 ILE A HB 1 ATOM 45 H HG12 . ILE A 1 3 ? -6.045 2.927 -1.569 1.00 11.33 ? 3 ILE A HG12 1 ATOM 46 H HG13 . ILE A 1 3 ? -4.696 2.153 -1.246 1.00 11.33 ? 3 ILE A HG13 1 ATOM 47 H HG21 . ILE A 1 3 ? -7.112 1.407 -3.799 1.00 8.76 ? 3 ILE A HG21 1 ATOM 48 H HG22 . ILE A 1 3 ? -7.830 0.227 -3.014 1.00 8.76 ? 3 ILE A HG22 1 ATOM 49 H HG23 . ILE A 1 3 ? -7.988 1.726 -2.512 1.00 8.76 ? 3 ILE A HG23 1 ATOM 50 H HD11 . ILE A 1 3 ? -4.395 3.586 -2.978 1.00 15.96 ? 3 ILE A HD11 1 ATOM 51 H HD12 . ILE A 1 3 ? -4.204 2.086 -3.466 1.00 15.96 ? 3 ILE A HD12 1 ATOM 52 H HD13 . ILE A 1 3 ? -5.553 2.861 -3.788 1.00 15.96 ? 3 ILE A HD13 1 ATOM 53 N N . PHE A 1 4 ? -8.490 -1.010 -0.380 1.00 5.41 ? 4 PHE A N 1 ATOM 54 C CA . PHE A 1 4 ? -9.238 -2.255 -0.307 1.00 5.29 ? 4 PHE A CA 1 ATOM 55 C C . PHE A 1 4 ? -9.126 -3.076 -1.579 1.00 4.92 ? 4 PHE A C 1 ATOM 56 O O . PHE A 1 4 ? -9.533 -2.631 -2.654 1.00 5.51 ? 4 PHE A O 1 ATOM 57 C CB . PHE A 1 4 ? -10.727 -1.954 -0.010 1.00 6.24 ? 4 PHE A CB 1 ATOM 58 C CG . PHE A 1 4 ? -11.575 -3.192 0.133 1.00 6.18 ? 4 PHE A CG 1 ATOM 59 C CD1 . PHE A 1 4 ? -12.580 -3.491 -0.766 1.00 9.22 ? 4 PHE A CD1 1 ATOM 60 C CD2 . PHE A 1 4 ? -11.357 -4.064 1.179 1.00 8.30 ? 4 PHE A CD2 1 ATOM 61 C CE1 . PHE A 1 4 ? -13.332 -4.676 -0.606 1.00 10.23 ? 4 PHE A CE1 1 ATOM 62 C CE2 . PHE A 1 4 ? -12.104 -5.212 1.331 1.00 10.03 ? 4 PHE A CE2 1 ATOM 63 C CZ . PHE A 1 4 ? -13.070 -5.516 0.434 1.00 10.94 ? 4 PHE A CZ 1 ATOM 64 H H . PHE A 1 4 ? -8.948 -0.323 -0.141 1.00 6.49 ? 4 PHE A H 1 ATOM 65 H HA . PHE A 1 4 ? -8.889 -2.789 0.424 1.00 6.35 ? 4 PHE A HA 1 ATOM 66 H HB2 . PHE A 1 4 ? -10.786 -1.455 0.819 1.00 7.49 ? 4 PHE A HB2 1 ATOM 67 H HB3 . PHE A 1 4 ? -11.091 -1.427 -0.739 1.00 7.49 ? 4 PHE A HB3 1 ATOM 68 H HD1 . PHE A 1 4 ? -12.746 -2.927 -1.486 1.00 11.06 ? 4 PHE A HD1 1 ATOM 69 H HD2 . PHE A 1 4 ? -10.683 -3.877 1.792 1.00 9.96 ? 4 PHE A HD2 1 ATOM 70 H HE1 . PHE A 1 4 ? -14.007 -4.884 -1.211 1.00 12.28 ? 4 PHE A HE1 1 ATOM 71 H HE2 . PHE A 1 4 ? -11.931 -5.787 2.042 1.00 12.04 ? 4 PHE A HE2 1 ATOM 72 H HZ . PHE A 1 4 ? -13.580 -6.285 0.547 1.00 13.12 ? 4 PHE A HZ 1 ATOM 73 N N . GLY A 1 5 ? -8.620 -4.296 -1.448 1.00 4.64 ? 5 GLY A N 1 ATOM 74 C CA . GLY A 1 5 ? -8.505 -5.191 -2.584 1.00 5.26 ? 5 GLY A CA 1 ATOM 75 C C . GLY A 1 5 ? -7.189 -5.156 -3.335 1.00 5.29 ? 5 GLY A C 1 ATOM 76 O O . GLY A 1 5 ? -7.052 -5.865 -4.341 1.00 5.76 ? 5 GLY A O 1 ATOM 77 H H . GLY A 1 5 ? -8.336 -4.628 -0.707 1.00 5.57 ? 5 GLY A H 1 ATOM 78 H HA2 . GLY A 1 5 ? -8.644 -6.100 -2.276 1.00 6.31 ? 5 GLY A HA2 1 ATOM 79 H HA3 . GLY A 1 5 ? -9.210 -4.981 -3.216 1.00 6.31 ? 5 GLY A HA3 1 ATOM 80 N N . PHE A 1 6 ? -6.222 -4.373 -2.859 1.00 5.11 ? 6 PHE A N 1 ATOM 81 C CA . PHE A 1 6 ? -4.960 -4.218 -3.568 1.00 4.98 ? 6 PHE A CA 1 ATOM 82 C C . PHE A 1 6 ? -3.836 -4.587 -2.616 1.00 5.27 ? 6 PHE A C 1 ATOM 83 O O . PHE A 1 6 ? -3.467 -3.826 -1.699 1.00 6.29 ? 6 PHE A O 1 ATOM 84 C CB . PHE A 1 6 ? -4.830 -2.810 -4.134 1.00 5.96 ? 6 PHE A CB 1 ATOM 85 C CG . PHE A 1 6 ? -5.904 -2.463 -5.151 1.00 5.09 ? 6 PHE A CG 1 ATOM 86 C CD1 . PHE A 1 6 ? -5.679 -2.607 -6.524 1.00 6.12 ? 6 PHE A CD1 1 ATOM 87 C CD2 . PHE A 1 6 ? -7.145 -2.009 -4.736 1.00 6.42 ? 6 PHE A CD2 1 ATOM 88 C CE1 . PHE A 1 6 ? -6.656 -2.292 -7.430 1.00 5.91 ? 6 PHE A CE1 1 ATOM 89 C CE2 . PHE A 1 6 ? -8.138 -1.689 -5.637 1.00 6.12 ? 6 PHE A CE2 1 ATOM 90 C CZ . PHE A 1 6 ? -7.892 -1.828 -6.992 1.00 6.20 ? 6 PHE A CZ 1 ATOM 91 H H . PHE A 1 6 ? -6.275 -3.922 -2.128 1.00 6.14 ? 6 PHE A H 1 ATOM 92 H HA . PHE A 1 6 ? -4.939 -4.841 -4.311 1.00 5.97 ? 6 PHE A HA 1 ATOM 93 H HB2 . PHE A 1 6 ? -4.893 -2.172 -3.405 1.00 7.15 ? 6 PHE A HB2 1 ATOM 94 H HB3 . PHE A 1 6 ? -3.968 -2.726 -4.571 1.00 7.15 ? 6 PHE A HB3 1 ATOM 95 H HD1 . PHE A 1 6 ? -4.853 -2.912 -6.825 1.00 7.34 ? 6 PHE A HD1 1 ATOM 96 H HD2 . PHE A 1 6 ? -7.310 -1.910 -3.826 1.00 7.71 ? 6 PHE A HD2 1 ATOM 97 H HE1 . PHE A 1 6 ? -6.493 -2.388 -8.341 1.00 7.09 ? 6 PHE A HE1 1 ATOM 98 H HE2 . PHE A 1 6 ? -8.963 -1.381 -5.338 1.00 7.34 ? 6 PHE A HE2 1 ATOM 99 H HZ . PHE A 1 6 ? -8.556 -1.619 -7.609 1.00 7.43 ? 6 PHE A HZ 1 ATOM 100 N N . GLY A 1 7 ? -3.293 -5.790 -2.771 1.00 5.34 ? 7 GLY A N 1 ATOM 101 C CA . GLY A 1 7 ? -2.303 -6.278 -1.839 1.00 5.06 ? 7 GLY A CA 1 ATOM 102 C C . GLY A 1 7 ? -1.081 -5.385 -1.775 1.00 5.48 ? 7 GLY A C 1 ATOM 103 O O . GLY A 1 7 ? -0.631 -4.849 -2.801 1.00 5.57 ? 7 GLY A O 1 ATOM 104 H H . GLY A 1 7 ? -3.485 -6.337 -3.406 1.00 6.41 ? 7 GLY A H 1 ATOM 105 H HA2 . GLY A 1 7 ? -2.692 -6.331 -0.952 1.00 6.07 ? 7 GLY A HA2 1 ATOM 106 H HA3 . GLY A 1 7 ? -2.021 -7.167 -2.105 1.00 6.07 ? 7 GLY A HA3 1 ATOM 107 N N . GLY A 1 8 ? -0.512 -5.218 -0.589 1.00 5.20 ? 8 GLY A N 1 ATOM 108 C CA . GLY A 1 8 ? 0.678 -4.354 -0.385 1.00 5.43 ? 8 GLY A CA 1 ATOM 109 C C . GLY A 1 8 ? 0.323 -2.867 -0.210 1.00 5.85 ? 8 GLY A C 1 ATOM 110 O O . GLY A 1 8 ? 1.153 -2.023 -0.149 1.00 5.71 ? 8 GLY A O 1 ATOM 111 H H . GLY A 1 8 ? -0.853 -5.529 0.082 1.00 6.24 ? 8 GLY A H 1 ATOM 112 H HA2 . GLY A 1 8 ? 1.236 -4.633 0.332 1.00 6.51 ? 8 GLY A HA2 1 ATOM 113 H HA3 . GLY A 1 8 ? 1.194 -4.377 -1.170 1.00 6.51 ? 8 GLY A HA3 1 HETATM 114 O O . HOH B 2 . ? -11.469 -1.027 -3.638 1.00 8.72 ? 101 HOH A O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 PHE 6 6 6 PHE PHE A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HOH _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id HOH _pdbx_nonpoly_scheme.auth_mon_id HOH _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 950 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-11-07 2 'Structure model' 1 1 2018-12-05 3 'Structure model' 1 2 2020-01-01 4 'Structure model' 2 0 2023-07-26 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation ? 'Coordinates and structure factor indices updated from space group #61 setting P c a b to more widely recognized setting P b c a' # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Database references' 7 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' struct_conn 4 4 'Structure model' atom_site 5 4 'Structure model' atom_sites 6 4 'Structure model' cell 7 4 'Structure model' database_2 8 4 'Structure model' symmetry # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_pdbx_audit_support.funding_organization' 5 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_atom_site.Cartn_x' 7 4 'Structure model' '_atom_site.Cartn_z' 8 4 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 9 4 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 10 4 'Structure model' '_cell.length_a' 11 4 'Structure model' '_cell.length_c' 12 4 'Structure model' '_database_2.pdbx_DOI' 13 4 'Structure model' '_database_2.pdbx_database_accession' 14 4 'Structure model' '_symmetry.space_group_name_H-M' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10_2142: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Sao Paulo Research Foundation (FAPESP)' Brazil '#2016/13148-4' 1 'Australian Research Council (ARC)' Australia FL150100146 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #