data_PRDCC_000236 # _chem_comp.id PRD_000236 _chem_comp.name "N-acetyl-L-alanyl-N-{(1S)-3,3-difluoro-1-(1-methylethyl)-2,4-dioxo-4-[(2-phenylethyl)amino]butyl}-L-prolinamide" _chem_comp.formula "C25 H37 F2 N4 O5" _chem_comp.formula_weight 511.582 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000236 C1 C1 C 0 1 N N N -15.714 18.565 39.585 8.717 -0.567 0.131 ACE 1 C polymer 1 1 1 ? ? ? PRD_000236 O1 O1 O 0 1 N N N -15.139 17.492 39.235 8.903 -1.753 0.303 ACE 1 O polymer 1 1 2 ? ? ? PRD_000236 C2 C2 C 0 1 N N N -16.638 18.653 40.801 9.883 0.346 -0.148 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000236 N1 N1 N 0 1 N N N -15.632 19.719 38.906 7.466 -0.066 0.184 ALA 2 N polymer 1 1 4 ? ? ? PRD_000236 C3 C3 C 0 1 N N S -14.823 19.843 37.709 6.332 -0.955 0.450 ALA 2 CA polymer 1 1 5 ? ? ? PRD_000236 C4 C4 C 0 1 N N N -13.552 20.637 38.064 5.076 -0.352 -0.124 ALA 2 C polymer 1 1 6 ? ? ? PRD_000236 O2 O2 O 0 1 N N N -13.530 21.872 38.000 4.980 0.852 -0.241 ALA 2 O polymer 1 1 7 ? ? ? PRD_000236 C5 C5 C 0 1 N N N -15.656 20.591 36.698 6.167 -1.133 1.961 ALA 2 CB polymer 1 1 8 ? ? ? PRD_000236 N2 N2 N 0 1 N N N -12.535 19.937 38.585 4.060 -1.149 -0.509 PRO 3 N polymer 1 1 9 ? ? ? PRD_000236 C6 C6 C 0 1 N N S -11.267 20.548 38.952 2.825 -0.705 -1.170 PRO 3 CA polymer 1 1 10 ? ? ? PRD_000236 C7 C7 C 0 1 N N N -10.815 21.350 37.769 2.097 0.278 -0.289 PRO 3 C polymer 1 1 11 ? ? ? PRD_000236 O3 O3 O 0 1 N N N -10.729 20.813 36.650 2.560 0.584 0.789 PRO 3 O polymer 1 1 12 ? ? ? PRD_000236 C8 C8 C 0 1 N N N -10.270 19.458 39.144 1.949 -1.956 -1.394 PRO 3 CB polymer 1 1 13 ? ? ? PRD_000236 C9 C9 C 0 1 N N N -10.960 18.136 38.777 2.493 -2.954 -0.338 PRO 3 CG polymer 1 1 14 ? ? ? PRD_000236 C10 C10 C 0 1 N N N -12.403 18.500 38.426 4.007 -2.613 -0.342 PRO 3 CD polymer 1 1 15 ? ? ? PRD_000236 C11 C11 C 0 1 N N N -8.548 23.755 37.125 -1.265 1.759 -0.187 VAI 4 C polymer 1 1 16 ? ? ? PRD_000236 N3 N3 N 0 1 N N N -10.581 22.631 38.001 0.933 0.818 -0.700 VAI 4 N polymer 1 1 17 ? ? ? PRD_000236 O4 O4 O 0 1 N N N -8.116 24.953 36.563 -1.941 2.755 0.583 VAI 4 O polymer 1 1 18 ? ? ? PRD_000236 C12 C12 C 0 1 N N S -10.108 23.663 37.089 0.226 1.773 0.156 VAI 4 CA polymer 1 1 19 ? ? ? PRD_000236 C13 C13 C 0 1 N N N -10.778 24.955 37.542 0.788 3.178 -0.074 VAI 4 CB polymer 1 1 20 ? ? ? PRD_000236 C14 C14 C 0 1 N N N -12.196 24.775 37.131 2.246 3.225 0.386 VAI 4 CG1 polymer 1 1 21 ? ? ? PRD_000236 C15 C15 C 0 1 N N N -10.696 25.177 39.045 0.713 3.519 -1.564 VAI 4 CG2 polymer 1 1 22 ? ? ? PRD_000236 C16 C16 C 0 1 N N N -7.972 22.728 36.177 -1.850 0.382 0.136 FPA 5 C1 polymer 1 1 23 ? ? ? PRD_000236 F1 F1 F 0 1 N N N -7.934 21.498 36.529 -1.241 -0.584 -0.672 FPA 5 F1 polymer 1 1 24 ? ? ? PRD_000236 F2 F2 F 0 1 N N N -8.672 22.581 35.132 -1.614 0.080 1.482 FPA 5 F2 polymer 1 1 25 ? ? ? PRD_000236 C17 C17 C 0 1 N N N -6.766 22.956 35.389 -3.334 0.393 -0.124 FPA 5 C2 polymer 1 1 26 ? ? ? PRD_000236 O5 O5 O 0 1 N N N -5.914 22.069 35.478 -3.803 1.175 -0.915 FPA 5 O1 polymer 1 1 27 ? ? ? PRD_000236 C18 C18 C 0 1 Y N N -6.146 23.876 30.568 -7.898 -1.060 0.426 PEA 6 "C1'" polymer 1 1 28 ? ? ? PRD_000236 C19 C19 C 0 1 Y N N -4.892 23.288 30.233 -8.403 -1.760 -0.653 PEA 6 "C6'" polymer 1 1 29 ? ? ? PRD_000236 C20 C20 C 0 1 Y N N -4.211 23.760 29.091 -9.713 -1.567 -1.050 PEA 6 "C5'" polymer 1 1 30 ? ? ? PRD_000236 C21 C21 C 0 1 Y N N -4.841 24.724 28.255 -10.517 -0.674 -0.368 PEA 6 "C4'" polymer 1 1 31 ? ? ? PRD_000236 C22 C22 C 0 1 Y N N -6.117 25.259 28.552 -10.012 0.026 0.711 PEA 6 "C3'" polymer 1 1 32 ? ? ? PRD_000236 C23 C23 C 0 1 Y N N -6.750 24.857 29.743 -8.702 -0.166 1.108 PEA 6 "C2'" polymer 1 1 33 ? ? ? PRD_000236 C24 C24 C 0 1 N N N -6.873 23.421 31.832 -6.471 -1.275 0.863 PEA 6 C2 polymer 1 1 34 ? ? ? PRD_000236 C25 C25 C 0 1 N N N -6.085 23.487 33.118 -5.558 -0.294 0.124 PEA 6 C1 polymer 1 1 35 ? ? ? PRD_000236 N4 N4 N 1 1 N N N -7.074 23.435 34.179 -4.168 -0.504 0.550 PEA 6 N polymer 1 1 36 ? ? ? PRD_000236 H1 H1 H 0 1 N N N -16.704 17.667 41.284 10.051 0.402 -1.224 ACE 1 H1 polymer 1 1 37 ? ? ? PRD_000236 H2 H2 H 0 1 N N N -16.234 19.385 41.516 9.665 1.342 0.238 ACE 1 H2 polymer 1 1 38 ? ? ? PRD_000236 H3 H3 H 0 1 N N N -17.640 18.970 40.478 10.776 -0.045 0.339 ACE 1 H3 polymer 1 1 39 ? ? ? PRD_000236 H4 H4 H 0 1 N N N -16.142 20.514 39.234 7.318 0.882 0.047 ALA 2 H polymer 1 1 40 ? ? ? PRD_000236 H5 H5 H 0 1 N N N -14.546 18.854 37.315 6.514 -1.924 -0.013 ALA 2 HA polymer 1 1 41 ? ? ? PRD_000236 H6 H6 H 0 1 N N N -15.083 20.711 35.767 5.902 -0.178 2.413 ALA 2 HB1 polymer 1 1 42 ? ? ? PRD_000236 H7 H7 H 0 1 N N N -16.577 20.026 36.491 5.378 -1.860 2.157 ALA 2 HB2 polymer 1 1 43 ? ? ? PRD_000236 H8 H8 H 0 1 N N N -15.916 21.582 37.099 7.104 -1.490 2.388 ALA 2 HB3 polymer 1 1 44 ? ? ? PRD_000236 H9 H9 H 0 1 N N N -11.356 21.176 39.851 3.063 -0.240 -2.126 PRO 3 HA polymer 1 1 45 ? ? ? PRD_000236 H10 H10 H 0 1 N N N -9.401 19.623 38.490 0.900 -1.731 -1.207 PRO 3 HB2 polymer 1 1 46 ? ? ? PRD_000236 H11 H11 H 0 1 N N N -9.939 19.431 40.193 2.087 -2.347 -2.402 PRO 3 HB3 polymer 1 1 47 ? ? ? PRD_000236 H12 H12 H 0 1 N N N -10.462 17.671 37.913 2.050 -2.769 0.640 PRO 3 HG2 polymer 1 1 48 ? ? ? PRD_000236 H13 H13 H 0 1 N N N -10.937 17.443 39.631 2.327 -3.985 -0.653 PRO 3 HG3 polymer 1 1 49 ? ? ? PRD_000236 H14 H14 H 0 1 N N N -13.098 17.981 39.103 4.508 -3.109 -1.173 PRO 3 HD2 polymer 1 1 50 ? ? ? PRD_000236 H15 H15 H 0 1 N N N -12.621 18.214 37.386 4.463 -2.904 0.605 PRO 3 HD3 polymer 1 1 51 ? ? ? PRD_000236 H16 H16 H 0 1 N N N -8.178 23.601 38.149 -1.396 1.969 -1.248 VAI 4 H1 polymer 1 1 52 ? ? ? PRD_000236 H17 H17 H 0 1 N N N -10.754 22.935 38.938 0.563 0.573 -1.563 VAI 4 H polymer 1 1 53 ? ? ? PRD_000236 H18 H18 H 0 1 N N N -7.167 24.993 36.593 -1.804 2.675 1.537 VAI 4 HO polymer 1 1 54 ? ? ? PRD_000236 H19 H19 H 0 1 N N N -10.424 23.433 36.061 0.361 1.495 1.201 VAI 4 HA polymer 1 1 55 ? ? ? PRD_000236 H20 H20 H 0 1 N N N -10.333 25.811 37.013 0.204 3.901 0.495 VAI 4 HB polymer 1 1 56 ? ? ? PRD_000236 H21 H21 H 0 0 N N N -12.777 25.665 37.416 2.854 2.597 -0.266 VAI 4 HG11 polymer 1 1 57 ? ? ? PRD_000236 H22 H22 H 0 0 N N N -12.247 24.637 36.041 2.608 4.252 0.343 VAI 4 HG12 polymer 1 1 58 ? ? ? PRD_000236 H23 H23 H 0 0 N N N -12.613 23.889 37.632 2.316 2.858 1.411 VAI 4 HG13 polymer 1 1 59 ? ? ? PRD_000236 H24 H24 H 0 0 N N N -11.196 26.122 39.304 -0.332 3.580 -1.870 VAI 4 HG21 polymer 1 1 60 ? ? ? PRD_000236 H25 H25 H 0 0 N N N -11.192 24.345 39.566 1.200 4.478 -1.742 VAI 4 HG22 polymer 1 1 61 ? ? ? PRD_000236 H26 H26 H 0 0 N N N -9.641 25.225 39.351 1.216 2.743 -2.141 VAI 4 HG23 polymer 1 1 62 ? ? ? PRD_000236 H27 H27 H 0 1 N N N -4.472 22.499 30.839 -7.775 -2.458 -1.186 PEA 6 "H6'" polymer 1 1 63 ? ? ? PRD_000236 H28 H28 H 0 1 N N N -3.223 23.394 28.854 -10.108 -2.114 -1.894 PEA 6 "H5'" polymer 1 1 64 ? ? ? PRD_000236 H29 H29 H 0 1 N N N -4.329 25.058 27.365 -11.541 -0.522 -0.679 PEA 6 "H4'" polymer 1 1 65 ? ? ? PRD_000236 H30 H30 H 0 1 N N N -6.593 25.959 27.881 -10.640 0.725 1.244 PEA 6 "H3'" polymer 1 1 66 ? ? ? PRD_000236 H31 H31 H 0 1 N N N -7.695 25.296 30.028 -8.307 0.381 1.951 PEA 6 "H2'" polymer 1 1 67 ? ? ? PRD_000236 H32 H32 H 0 1 N N N -7.764 24.054 31.952 -6.391 -1.108 1.937 PEA 6 H21 polymer 1 1 68 ? ? ? PRD_000236 H33 H33 H 0 1 N N N -7.183 22.376 31.682 -6.170 -2.297 0.630 PEA 6 H22 polymer 1 1 69 ? ? ? PRD_000236 H34 H34 H 0 1 N N N -5.396 22.632 33.192 -5.639 -0.461 -0.950 PEA 6 H11 polymer 1 1 70 ? ? ? PRD_000236 H35 H35 H 0 1 N N N -5.513 24.425 33.171 -5.859 0.728 0.357 PEA 6 H12 polymer 1 1 71 ? ? ? PRD_000236 H36 H36 H 0 1 N N N -7.391 24.373 34.318 -3.890 -1.449 0.335 PEA 6 HN2 polymer 1 1 72 ? ? ? PRD_000236 H37 H37 H 0 1 N N N -7.829 22.876 33.836 -4.094 -0.349 1.545 PEA 6 HN3 polymer 1 1 73 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000236 C1 O1 DOUB N N 1 PRD_000236 C1 C2 SING N N 2 PRD_000236 C2 H1 SING N N 3 PRD_000236 C2 H2 SING N N 4 PRD_000236 C2 H3 SING N N 5 PRD_000236 N1 C3 SING N N 6 PRD_000236 N1 H4 SING N N 7 PRD_000236 C3 C4 SING N N 8 PRD_000236 C3 C5 SING N N 9 PRD_000236 C3 H5 SING N N 10 PRD_000236 C4 O2 DOUB N N 11 PRD_000236 C5 H6 SING N N 12 PRD_000236 C5 H7 SING N N 13 PRD_000236 C5 H8 SING N N 14 PRD_000236 N2 C6 SING N N 15 PRD_000236 N2 C10 SING N N 16 PRD_000236 C6 C7 SING N N 17 PRD_000236 C6 C8 SING N N 18 PRD_000236 C6 H9 SING N N 19 PRD_000236 C7 O3 DOUB N N 20 PRD_000236 C8 C9 SING N N 21 PRD_000236 C8 H10 SING N N 22 PRD_000236 C8 H11 SING N N 23 PRD_000236 C9 C10 SING N N 24 PRD_000236 C9 H12 SING N N 25 PRD_000236 C9 H13 SING N N 26 PRD_000236 C10 H14 SING N N 27 PRD_000236 C10 H15 SING N N 28 PRD_000236 C11 C12 SING N N 29 PRD_000236 C11 O4 SING N N 30 PRD_000236 C11 H16 SING N N 31 PRD_000236 N3 C12 SING N N 32 PRD_000236 N3 H17 SING N N 33 PRD_000236 O4 H18 SING N N 34 PRD_000236 C12 C13 SING N N 35 PRD_000236 C12 H19 SING N N 36 PRD_000236 C13 C14 SING N N 37 PRD_000236 C13 H20 SING N N 38 PRD_000236 C14 H21 SING N N 39 PRD_000236 C14 H22 SING N N 40 PRD_000236 C14 H23 SING N N 41 PRD_000236 C15 C13 SING N N 42 PRD_000236 C15 H24 SING N N 43 PRD_000236 C15 H25 SING N N 44 PRD_000236 C15 H26 SING N N 45 PRD_000236 C16 F1 SING N N 46 PRD_000236 C16 F2 SING N N 47 PRD_000236 C16 C17 SING N N 48 PRD_000236 C17 O5 DOUB N N 49 PRD_000236 C18 C19 DOUB Y N 50 PRD_000236 C18 C23 SING Y N 51 PRD_000236 C18 C24 SING N N 52 PRD_000236 C19 C20 SING Y N 53 PRD_000236 C19 H27 SING N N 54 PRD_000236 C20 C21 DOUB Y N 55 PRD_000236 C20 H28 SING N N 56 PRD_000236 C21 C22 SING Y N 57 PRD_000236 C21 H29 SING N N 58 PRD_000236 C22 C23 DOUB Y N 59 PRD_000236 C22 H30 SING N N 60 PRD_000236 C23 H31 SING N N 61 PRD_000236 C24 C25 SING N N 62 PRD_000236 C24 H32 SING N N 63 PRD_000236 C24 H33 SING N N 64 PRD_000236 C25 N4 SING N N 65 PRD_000236 C25 H34 SING N N 66 PRD_000236 C25 H35 SING N N 67 PRD_000236 N4 H36 SING N N 68 PRD_000236 N4 H37 SING N N 69 PRD_000236 C1 N1 SING N N 70 PRD_000236 C4 N2 SING N N 71 PRD_000236 C7 N3 SING N N 72 PRD_000236 C11 C16 SING N N 73 PRD_000236 C17 N4 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000236 SMILES ACDLabs 12.01 "O=C(NC(C(C)C)C(O)C(F)(F)C(=O)[NH2+]CCc1ccccc1)C2N(C(=O)C(NC(=O)C)C)CCC2" PRD_000236 InChI InChI 1.03 "InChI=1S/C25H36F2N4O5/c1-15(2)20(21(33)25(26,27)24(36)28-13-12-18-9-6-5-7-10-18)30-22(34)19-11-8-14-31(19)23(35)16(3)29-17(4)32/h5-7,9-10,15-16,19-21,33H,8,11-14H2,1-4H3,(H,28,36)(H,29,32)(H,30,34)/p+1/t16-,19+,20-,21+/m0/s1" PRD_000236 InChIKey InChI 1.03 BPMZCRLIQGUKDU-NASSWSRMSA-O PRD_000236 SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(C)=O)[C@H](O)C(F)(F)C(=O)[NH2+]CCc2ccccc2" PRD_000236 SMILES CACTVS 3.385 "CC(C)[CH](NC(=O)[CH]1CCCN1C(=O)[CH](C)NC(C)=O)[CH](O)C(F)(F)C(=O)[NH2+]CCc2ccccc2" PRD_000236 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H](C(=O)N1CCC[C@H]1C(=O)N[C@@H](C(C)C)C(C(C(=O)[NH2+]CCc2ccccc2)(F)F)O)NC(=O)C" PRD_000236 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(C(C(=O)[NH2+]CCc1ccccc1)(F)F)O)NC(=O)C2CCCN2C(=O)C(C)NC(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000236 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alanyl-N-{(3S,4R)-5,5-difluoro-4-hydroxy-2-methyl-6-oxo-6-[(2-phenylethyl)ammonio]hexan-3-yl}-L-prolinamide" PRD_000236 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(4S)-4-[[(2S)-1-[(2S)-2-acetamidopropanoyl]pyrrolidin-2-yl]carbonylamino]-2,2-bis(fluoranyl)-5-methyl-3-oxidanyl-hexanoyl]-(2-phenylethyl)azanium" #