data_PRDCC_000241 # _chem_comp.id PRD_000241 _chem_comp.name "N-acetyl-L-leucyl-L-alpha-aspartyl-L-alpha-glutamyl-L-seryl-L-aspartic aldehyde" _chem_comp.formula "C24 H39 N5 O13" _chem_comp.formula_weight 605.592 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000241 C1 C1 C 0 1 N N N 29.056 66.742 17.675 6.554 -1.877 1.125 ACE 1 C polymer 1 1 1 ? ? ? PRD_000241 O1 O1 O 0 1 N N N 28.396 67.500 16.952 5.452 -2.265 0.798 ACE 1 O polymer 1 1 2 ? ? ? PRD_000241 C2 C2 C 0 1 N N N 29.546 67.282 18.995 7.402 -2.710 2.050 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000241 N1 N1 N 0 1 N N N 29.429 65.562 17.543 7.021 -0.703 0.656 LEU 2 N polymer 1 1 4 ? ? ? PRD_000241 C3 C3 C 0 1 N N S 29.050 64.846 16.309 6.199 0.104 -0.249 LEU 2 CA polymer 1 1 5 ? ? ? PRD_000241 C4 C4 C 0 1 N N N 28.496 63.464 16.667 4.910 0.474 0.439 LEU 2 C polymer 1 1 6 ? ? ? PRD_000241 O2 O2 O 0 1 N N N 28.963 62.841 17.624 4.527 -0.167 1.395 LEU 2 O polymer 1 1 7 ? ? ? PRD_000241 C5 C5 C 0 1 N N N 30.284 64.660 15.397 5.889 -0.702 -1.512 LEU 2 CB polymer 1 1 8 ? ? ? PRD_000241 C6 C6 C 0 1 N N N 31.032 65.906 14.880 7.187 -0.971 -2.276 LEU 2 CG polymer 1 1 9 ? ? ? PRD_000241 C7 C7 C 0 1 N N N 32.219 65.455 14.023 6.896 -1.880 -3.471 LEU 2 CD1 polymer 1 1 10 ? ? ? PRD_000241 C8 C8 C 0 1 N N N 30.094 66.774 14.036 7.770 0.354 -2.774 LEU 2 CD2 polymer 1 1 11 ? ? ? PRD_000241 N2 N2 N 0 1 N N N 27.502 62.984 15.903 4.183 1.518 -0.008 ASP 3 N polymer 1 1 12 ? ? ? PRD_000241 C9 C9 C 0 1 N N S 26.906 61.665 16.183 2.880 1.813 0.592 ASP 3 CA polymer 1 1 13 ? ? ? PRD_000241 C10 C10 C 0 1 N N N 27.628 60.532 15.421 1.832 0.918 -0.018 ASP 3 C polymer 1 1 14 ? ? ? PRD_000241 O3 O3 O 0 1 N N N 27.951 60.612 14.217 2.143 0.113 -0.870 ASP 3 O polymer 1 1 15 ? ? ? PRD_000241 C11 C11 C 0 1 N N N 25.387 61.671 15.856 2.517 3.276 0.330 ASP 3 CB polymer 1 1 16 ? ? ? PRD_000241 C12 C12 C 0 1 N N N 24.626 62.738 16.663 3.487 4.172 1.056 ASP 3 CG polymer 1 1 17 ? ? ? PRD_000241 O4 O4 O 0 1 N N N 24.801 62.748 17.892 4.315 3.693 1.795 ASP 3 OD1 polymer 1 1 18 ? ? ? PRD_000241 O5 O5 O 0 1 N N N 23.853 63.532 16.106 3.432 5.502 0.882 ASP 3 OD2 polymer 1 1 19 ? ? ? PRD_000241 N3 N3 N 0 1 N N N 27.858 59.455 16.196 0.549 1.012 0.383 GLU 4 N polymer 1 1 20 ? ? ? PRD_000241 C13 C13 C 0 1 N N S 28.506 58.195 15.786 -0.470 0.143 -0.210 GLU 4 CA polymer 1 1 21 ? ? ? PRD_000241 C14 C14 C 0 1 N N N 27.635 57.034 16.276 -1.821 0.801 -0.095 GLU 4 C polymer 1 1 22 ? ? ? PRD_000241 O6 O6 O 0 1 N N N 26.736 57.247 17.108 -1.923 1.889 0.430 GLU 4 O polymer 1 1 23 ? ? ? PRD_000241 C15 C15 C 0 1 N N N 29.936 58.019 16.365 -0.491 -1.197 0.529 GLU 4 CB polymer 1 1 24 ? ? ? PRD_000241 C16 C16 C 0 1 N N N 30.611 59.250 16.957 0.839 -1.921 0.309 GLU 4 CG polymer 1 1 25 ? ? ? PRD_000241 C17 C17 C 0 1 N N N 32.012 58.955 17.486 0.818 -3.241 1.037 GLU 4 CD polymer 1 1 26 ? ? ? PRD_000241 O7 O7 O 0 1 N N N 32.149 58.221 18.498 -0.159 -3.568 1.667 GLU 4 OE1 polymer 1 1 27 ? ? ? PRD_000241 O8 O8 O 0 1 N N N 32.984 59.465 16.885 1.886 -4.053 0.985 GLU 4 OE2 polymer 1 1 28 ? ? ? PRD_000241 N4 N4 N 0 1 N N N 27.889 55.823 15.777 -2.916 0.180 -0.577 SER 5 N polymer 1 1 29 ? ? ? PRD_000241 C18 C18 C 0 1 N N S 27.101 54.640 16.188 -4.229 0.820 -0.465 SER 5 CA polymer 1 1 30 ? ? ? PRD_000241 C19 C19 C 0 1 N N N 27.858 53.749 17.185 -5.305 -0.235 -0.483 SER 5 C polymer 1 1 31 ? ? ? PRD_000241 O9 O9 O 0 1 N N N 29.090 53.698 17.268 -5.004 -1.406 -0.579 SER 5 O polymer 1 1 32 ? ? ? PRD_000241 C20 C20 C 0 1 N N N 26.735 53.798 14.956 -4.433 1.775 -1.643 SER 5 CB polymer 1 1 33 ? ? ? PRD_000241 O10 O10 O 0 1 N N N 27.882 53.166 14.397 -4.479 1.028 -2.860 SER 5 OG polymer 1 1 34 ? ? ? PRD_000241 C21 C21 C 0 1 N N N 27.187 50.444 18.537 -7.997 -1.251 -1.856 ASJ 6 C polymer 1 1 35 ? ? ? PRD_000241 N5 N5 N 0 1 N N N 27.193 52.863 18.107 -6.601 0.122 -0.391 ASJ 6 N polymer 1 1 36 ? ? ? PRD_000241 O11 O11 O 0 1 N N N 27.809 49.492 19.102 -8.576 -0.111 -2.494 ASJ 6 O polymer 1 1 37 ? ? ? PRD_000241 C22 C22 C 0 1 N N S 27.482 51.811 19.095 -7.647 -0.904 -0.408 ASJ 6 CA polymer 1 1 38 ? ? ? PRD_000241 C23 C23 C 0 1 N N N 26.554 52.073 20.310 -8.893 -0.373 0.304 ASJ 6 CB polymer 1 1 39 ? ? ? PRD_000241 C24 C24 C 0 1 N N N 27.076 53.150 21.238 -8.580 -0.147 1.761 ASJ 6 CG polymer 1 1 40 ? ? ? PRD_000241 O12 O12 O 0 1 N N N 26.325 53.618 22.123 -9.531 0.320 2.587 ASJ 6 OD1 polymer 1 1 41 ? ? ? PRD_000241 O13 O13 O 0 1 N N N 28.277 53.568 21.110 -7.475 -0.385 2.186 ASJ 6 OD2 polymer 1 1 42 ? ? ? PRD_000241 H1 H1 H 0 1 N N N 29.218 68.326 19.109 6.863 -3.619 2.318 ACE 1 H1 polymer 1 1 43 ? ? ? PRD_000241 H2 H2 H 0 1 N N N 29.133 66.676 19.815 8.334 -2.974 1.550 ACE 1 H2 polymer 1 1 44 ? ? ? PRD_000241 H3 H3 H 0 1 N N N 30.645 67.238 19.024 7.623 -2.140 2.953 ACE 1 H3 polymer 1 1 45 ? ? ? PRD_000241 H4 H4 H 0 1 N N N 29.970 65.112 18.253 7.902 -0.393 0.917 LEU 2 H polymer 1 1 46 ? ? ? PRD_000241 H5 H5 H 0 1 N N N 28.282 65.415 15.764 6.740 1.011 -0.520 LEU 2 HA polymer 1 1 47 ? ? ? PRD_000241 H6 H6 H 0 1 N N N 31.012 64.059 15.961 5.428 -1.649 -1.235 LEU 2 HB2 polymer 1 1 48 ? ? ? PRD_000241 H7 H7 H 0 1 N N N 29.949 64.097 14.514 5.206 -0.136 -2.145 LEU 2 HB3 polymer 1 1 49 ? ? ? PRD_000241 H8 H8 H 0 1 N N N 31.400 66.490 15.736 7.904 -1.457 -1.615 LEU 2 HG polymer 1 1 50 ? ? ? PRD_000241 H9 H9 H 0 0 N N N 32.759 66.338 13.650 6.180 -1.394 -4.133 LEU 2 HD11 polymer 1 1 51 ? ? ? PRD_000241 H10 H10 H 0 0 N N N 32.898 64.840 14.632 7.821 -2.072 -4.016 LEU 2 HD12 polymer 1 1 52 ? ? ? PRD_000241 H11 H11 H 0 0 N N N 31.852 64.862 13.172 6.481 -2.824 -3.117 LEU 2 HD13 polymer 1 1 53 ? ? ? PRD_000241 H12 H12 H 0 0 N N N 30.639 67.658 13.674 8.695 0.162 -3.318 LEU 2 HD21 polymer 1 1 54 ? ? ? PRD_000241 H13 H13 H 0 0 N N N 29.729 66.191 13.177 7.053 0.841 -3.435 LEU 2 HD22 polymer 1 1 55 ? ? ? PRD_000241 H14 H14 H 0 0 N N N 29.240 67.096 14.651 7.977 1.002 -1.922 LEU 2 HD23 polymer 1 1 56 ? ? ? PRD_000241 H15 H15 H 0 1 N N N 27.162 63.527 15.135 4.523 2.073 -0.727 ASP 3 H polymer 1 1 57 ? ? ? PRD_000241 H16 H16 H 0 1 N N N 27.010 61.459 17.259 2.927 1.637 1.667 ASP 3 HA polymer 1 1 58 ? ? ? PRD_000241 H17 H17 H 0 1 N N N 25.256 61.877 14.783 2.568 3.477 -0.740 ASP 3 HB2 polymer 1 1 59 ? ? ? PRD_000241 H18 H18 H 0 1 N N N 24.969 60.682 16.093 1.506 3.469 0.688 ASP 3 HB3 polymer 1 1 60 ? ? ? PRD_000241 H19 H19 H 0 1 N N N 23.458 64.099 16.757 4.075 6.035 1.368 ASP 3 HD2 polymer 1 1 61 ? ? ? PRD_000241 H20 H20 H 0 1 N N N 27.558 59.516 17.148 0.300 1.656 1.065 GLU 4 H polymer 1 1 62 ? ? ? PRD_000241 H21 H21 H 0 1 N N N 28.566 58.153 14.688 -0.236 -0.026 -1.261 GLU 4 HA polymer 1 1 63 ? ? ? PRD_000241 H22 H22 H 0 1 N N N 29.879 57.260 17.159 -0.636 -1.021 1.595 GLU 4 HB2 polymer 1 1 64 ? ? ? PRD_000241 H23 H23 H 0 1 N N N 30.578 57.650 15.551 -1.307 -1.810 0.147 GLU 4 HB3 polymer 1 1 65 ? ? ? PRD_000241 H24 H24 H 0 1 N N N 30.685 60.021 16.176 0.984 -2.097 -0.757 GLU 4 HG2 polymer 1 1 66 ? ? ? PRD_000241 H25 H25 H 0 1 N N N 29.993 59.626 17.786 1.655 -1.308 0.691 GLU 4 HG3 polymer 1 1 67 ? ? ? PRD_000241 H26 H26 H 0 1 N N N 33.792 59.207 17.313 1.826 -4.888 1.468 GLU 4 HE2 polymer 1 1 68 ? ? ? PRD_000241 H27 H27 H 0 1 N N N 28.627 55.713 15.111 -2.835 -0.690 -0.997 SER 5 H polymer 1 1 69 ? ? ? PRD_000241 H28 H28 H 0 1 N N N 26.169 54.978 16.665 -4.283 1.378 0.469 SER 5 HA polymer 1 1 70 ? ? ? PRD_000241 H29 H29 H 0 1 N N N 26.010 53.026 15.253 -5.370 2.316 -1.514 SER 5 HB2 polymer 1 1 71 ? ? ? PRD_000241 H30 H30 H 0 1 N N N 26.282 54.453 14.197 -3.606 2.484 -1.683 SER 5 HB3 polymer 1 1 72 ? ? ? PRD_000241 H31 H31 H 0 1 N N N 27.624 52.654 13.639 -4.606 1.571 -3.650 SER 5 HG polymer 1 1 73 ? ? ? PRD_000241 H32 H32 H 0 1 N N N 27.457 50.444 17.471 -8.710 -2.076 -1.870 ASJ 6 H3 polymer 1 1 74 ? ? ? PRD_000241 H33 H33 H 0 1 N Y N 26.108 50.257 18.642 -7.092 -1.545 -2.388 ASJ 6 HAA polymer 1 1 75 ? ? ? PRD_000241 H34 H34 H 0 1 N N N 26.205 53.013 18.060 -6.842 1.059 -0.315 ASJ 6 H polymer 1 1 76 ? ? ? PRD_000241 H35 H35 H 0 1 N N N 27.568 48.669 18.693 -8.823 -0.259 -3.417 ASJ 6 HO polymer 1 1 77 ? ? ? PRD_000241 H36 H36 H 0 1 N N N 28.532 51.866 19.419 -7.288 -1.797 0.104 ASJ 6 HA polymer 1 1 78 ? ? ? PRD_000241 H37 H37 H 0 1 N N N 25.567 52.382 19.936 -9.200 0.568 -0.152 ASJ 6 HB polymer 1 1 79 ? ? ? PRD_000241 H38 H38 H 0 1 N N N 26.453 51.138 20.881 -9.700 -1.101 0.215 ASJ 6 HBA polymer 1 1 80 ? ? ? PRD_000241 H39 H39 H 0 0 N N N 26.794 54.277 22.621 -9.283 0.449 3.512 ASJ 6 HOD1 polymer 1 1 81 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000241 C1 O1 DOUB N N 1 PRD_000241 C1 C2 SING N N 2 PRD_000241 C2 H1 SING N N 3 PRD_000241 C2 H2 SING N N 4 PRD_000241 C2 H3 SING N N 5 PRD_000241 N1 C3 SING N N 6 PRD_000241 N1 H4 SING N N 7 PRD_000241 C3 C4 SING N N 8 PRD_000241 C3 C5 SING N N 9 PRD_000241 C3 H5 SING N N 10 PRD_000241 C4 O2 DOUB N N 11 PRD_000241 C5 C6 SING N N 12 PRD_000241 C5 H6 SING N N 13 PRD_000241 C5 H7 SING N N 14 PRD_000241 C6 C7 SING N N 15 PRD_000241 C6 C8 SING N N 16 PRD_000241 C6 H8 SING N N 17 PRD_000241 C7 H9 SING N N 18 PRD_000241 C7 H10 SING N N 19 PRD_000241 C7 H11 SING N N 20 PRD_000241 C8 H12 SING N N 21 PRD_000241 C8 H13 SING N N 22 PRD_000241 C8 H14 SING N N 23 PRD_000241 N2 C9 SING N N 24 PRD_000241 N2 H15 SING N N 25 PRD_000241 C9 C10 SING N N 26 PRD_000241 C9 C11 SING N N 27 PRD_000241 C9 H16 SING N N 28 PRD_000241 C10 O3 DOUB N N 29 PRD_000241 C11 C12 SING N N 30 PRD_000241 C11 H17 SING N N 31 PRD_000241 C11 H18 SING N N 32 PRD_000241 C12 O4 DOUB N N 33 PRD_000241 C12 O5 SING N N 34 PRD_000241 O5 H19 SING N N 35 PRD_000241 N3 C13 SING N N 36 PRD_000241 N3 H20 SING N N 37 PRD_000241 C13 C14 SING N N 38 PRD_000241 C13 C15 SING N N 39 PRD_000241 C13 H21 SING N N 40 PRD_000241 C14 O6 DOUB N N 41 PRD_000241 C15 C16 SING N N 42 PRD_000241 C15 H22 SING N N 43 PRD_000241 C15 H23 SING N N 44 PRD_000241 C16 C17 SING N N 45 PRD_000241 C16 H24 SING N N 46 PRD_000241 C16 H25 SING N N 47 PRD_000241 C17 O7 DOUB N N 48 PRD_000241 C17 O8 SING N N 49 PRD_000241 O8 H26 SING N N 50 PRD_000241 N4 C18 SING N N 51 PRD_000241 N4 H27 SING N N 52 PRD_000241 C18 C19 SING N N 53 PRD_000241 C18 C20 SING N N 54 PRD_000241 C18 H28 SING N N 55 PRD_000241 C19 O9 DOUB N N 56 PRD_000241 C20 O10 SING N N 57 PRD_000241 C20 H29 SING N N 58 PRD_000241 C20 H30 SING N N 59 PRD_000241 O10 H31 SING N N 60 PRD_000241 C21 O11 SING N N 61 PRD_000241 C21 C22 SING N N 62 PRD_000241 C21 H32 SING N N 63 PRD_000241 C21 H33 SING N N 64 PRD_000241 C22 N5 SING N N 65 PRD_000241 N5 H34 SING N N 66 PRD_000241 O11 H35 SING N N 67 PRD_000241 C23 C22 SING N N 68 PRD_000241 C22 H36 SING N N 69 PRD_000241 C23 C24 SING N N 70 PRD_000241 C23 H37 SING N N 71 PRD_000241 C23 H38 SING N N 72 PRD_000241 C24 O13 DOUB N N 73 PRD_000241 C24 O12 SING N N 74 PRD_000241 O12 H39 SING N N 75 PRD_000241 C1 N1 SING N N 76 PRD_000241 C19 N5 SING N N 77 PRD_000241 C4 N2 SING N N 78 PRD_000241 C10 N3 SING N N 79 PRD_000241 C14 N4 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000241 SMILES ACDLabs 12.01 "O=C(NC(CC(=O)O)CO)C(NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C)CC(C)C)CC(=O)O)CCC(=O)O)CO" PRD_000241 InChI InChI 1.03 "InChI=1S/C24H39N5O13/c1-11(2)6-15(25-12(3)32)22(40)28-16(8-20(37)38)23(41)27-14(4-5-18(33)34)21(39)29-17(10-31)24(42)26-13(9-30)7-19(35)36/h11,13-17,30-31H,4-10H2,1-3H3,(H,25,32)(H,26,42)(H,27,41)(H,28,40)(H,29,39)(H,33,34)(H,35,36)(H,37,38)" PRD_000241 InChIKey InChI 1.03 KYQNCUWUPIOFBZ-UHFFFAOYSA-N PRD_000241 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(C)=O)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](CO)C(=O)N[C@H](CO)CC(O)=O" PRD_000241 SMILES CACTVS 3.370 "CC(C)C[CH](NC(C)=O)C(=O)N[CH](CC(O)=O)C(=O)N[CH](CCC(O)=O)C(=O)N[CH](CO)C(=O)N[CH](CO)CC(O)=O" PRD_000241 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(=O)O)CO)NC(=O)C" PRD_000241 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC(CC(=O)O)C(=O)NC(CCC(=O)O)C(=O)NC(CO)C(=O)NC(CC(=O)O)CO)NC(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000241 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-leucyl-L-alpha-aspartyl-L-alpha-glutamyl-N-[(2R)-1-carboxy-3-hydroxypropan-2-yl]-L-serinamide" PRD_000241 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(4S)-4-[[(2S)-2-[[(2S)-2-acetamido-4-methyl-pentanoyl]amino]-4-oxidanyl-4-oxidanylidene-butanoyl]amino]-5-[[(2S)-1-[[(2S)-1,4-bis(oxidanyl)-4-oxidanylidene-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid" #