data_PRDCC_000277 # _chem_comp.id PRD_000277 _chem_comp.name "N-[(benzyloxy)carbonyl]-L-alpha-aspartyl-L-alpha-glutamyl-N-[(1S)-1-(carboxymethyl)-3-chloro-2-oxopropyl]-L-valinamide" _chem_comp.formula "C27 H35 Cl N4 O12" _chem_comp.formula_weight 643.039 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000277 C1 C1 C 0 1 N N N ? ? ? 5.592 0.402 0.376 PHQ 1 C1 polymer 1 1 1 ? ? ? PRD_000277 O1 O1 O 0 1 N N N ? ? ? 5.237 0.079 1.492 PHQ 1 O1 polymer 1 1 2 ? ? ? PRD_000277 O2 O2 O 0 1 N N N ? ? ? 6.702 -0.138 -0.161 PHQ 1 O2 polymer 1 1 3 ? ? ? PRD_000277 C2 C2 C 0 1 N N N ? ? ? 7.425 -1.101 0.652 PHQ 1 C2 polymer 1 1 4 ? ? ? PRD_000277 C3 C3 C 0 1 Y N N ? ? ? 8.630 -1.594 -0.107 PHQ 1 C3 polymer 1 1 5 ? ? ? PRD_000277 C4 C4 C 0 1 Y N N ? ? ? 9.839 -0.935 0.011 PHQ 1 C4 polymer 1 1 6 ? ? ? PRD_000277 C5 C5 C 0 1 Y N N ? ? ? 10.944 -1.388 -0.685 PHQ 1 C5 polymer 1 1 7 ? ? ? PRD_000277 C6 C6 C 0 1 Y N N ? ? ? 10.840 -2.500 -1.499 PHQ 1 C6 polymer 1 1 8 ? ? ? PRD_000277 C7 C7 C 0 1 Y N N ? ? ? 9.632 -3.160 -1.616 PHQ 1 C7 polymer 1 1 9 ? ? ? PRD_000277 C8 C8 C 0 1 Y N N ? ? ? 8.528 -2.710 -0.917 PHQ 1 C8 polymer 1 1 10 ? ? ? PRD_000277 N1 N1 N 0 1 N N N 42.576 28.235 22.593 4.872 1.298 -0.328 ASP 2 N polymer 1 1 11 ? ? ? PRD_000277 C9 C9 C 0 1 N N S 41.937 28.305 23.936 3.605 1.803 0.208 ASP 2 CA polymer 1 1 12 ? ? ? PRD_000277 C10 C10 C 0 1 N N N 41.548 29.744 24.265 2.491 0.858 -0.163 ASP 2 C polymer 1 1 13 ? ? ? PRD_000277 O3 O3 O 0 1 N N N 42.279 30.682 23.942 2.731 -0.138 -0.811 ASP 2 O polymer 1 1 14 ? ? ? PRD_000277 C11 C11 C 0 1 N N N 42.898 27.767 25.001 3.317 3.186 -0.379 ASP 2 CB polymer 1 1 15 ? ? ? PRD_000277 C12 C12 C 0 1 N N N 43.325 26.333 24.733 4.383 4.153 0.068 ASP 2 CG polymer 1 1 16 ? ? ? PRD_000277 O4 O4 O 0 1 N N N 42.440 25.465 24.588 5.222 3.802 0.864 ASP 2 OD1 polymer 1 1 17 ? ? ? PRD_000277 O5 O5 O 0 1 N N N 44.546 26.072 24.678 4.401 5.404 -0.418 ASP 2 OD2 polymer 1 1 18 ? ? ? PRD_000277 N2 N2 N 0 1 N N N 40.390 29.912 24.899 1.227 1.120 0.226 GLU 3 N polymer 1 1 19 ? ? ? PRD_000277 C13 C13 C 0 1 N N S 39.892 31.234 25.272 0.145 0.202 -0.135 GLU 3 CA polymer 1 1 20 ? ? ? PRD_000277 C14 C14 C 0 1 N N N 39.393 31.179 26.712 -1.163 0.950 -0.154 GLU 3 C polymer 1 1 21 ? ? ? PRD_000277 O6 O6 O 0 1 N N N 39.218 30.098 27.263 -1.188 2.134 0.108 GLU 3 O polymer 1 1 22 ? ? ? PRD_000277 C15 C15 C 0 1 N N N 38.732 31.645 24.357 0.070 -0.928 0.894 GLU 3 CB polymer 1 1 23 ? ? ? PRD_000277 C16 C16 C 0 1 N N N 38.973 31.418 22.872 1.350 -1.765 0.826 GLU 3 CG polymer 1 1 24 ? ? ? PRD_000277 C17 C17 C 0 1 N N N 37.863 31.995 22.009 1.277 -2.878 1.839 GLU 3 CD polymer 1 1 25 ? ? ? PRD_000277 O7 O7 O 0 1 N N N 36.675 31.787 22.337 0.301 -2.991 2.543 GLU 3 OE1 polymer 1 1 26 ? ? ? PRD_000277 O8 O8 O 0 1 N N N 38.177 32.653 20.995 2.295 -3.744 1.959 GLU 3 OE2 polymer 1 1 27 ? ? ? PRD_000277 N3 N3 N 0 1 N N N 39.156 32.342 27.316 -2.305 0.304 -0.462 VAL 4 N polymer 1 1 28 ? ? ? PRD_000277 C18 C18 C 0 1 N N S 38.660 32.392 28.689 -3.577 1.032 -0.481 VAL 4 CA polymer 1 1 29 ? ? ? PRD_000277 C19 C19 C 0 1 N N N 37.274 33.033 28.778 -4.710 0.069 -0.237 VAL 4 C polymer 1 1 30 ? ? ? PRD_000277 O9 O9 O 0 1 N N N 36.815 33.694 27.850 -4.538 -1.122 -0.391 VAL 4 O polymer 1 1 31 ? ? ? PRD_000277 C20 C20 C 0 1 N N N 39.631 33.169 29.616 -3.761 1.702 -1.844 VAL 4 CB polymer 1 1 32 ? ? ? PRD_000277 C21 C21 C 0 1 N N N 40.941 32.416 29.746 -2.680 2.767 -2.038 VAL 4 CG1 polymer 1 1 33 ? ? ? PRD_000277 C22 C22 C 0 1 N N N 39.876 34.565 29.068 -3.646 0.650 -2.949 VAL 4 CG2 polymer 1 1 34 ? ? ? PRD_000277 N4 N4 N 0 1 N N N 36.621 32.467 29.772 -5.915 0.531 0.151 ASP 5 N polymer 1 1 35 ? ? ? PRD_000277 C23 C23 C 0 1 N N S 35.190 32.750 30.127 -6.985 -0.410 0.493 ASP 5 CA polymer 1 1 36 ? ? ? PRD_000277 C24 C24 C 0 1 N N N 35.126 33.771 31.158 -7.709 -0.824 -0.762 ASP 5 C polymer 1 1 37 ? ? ? PRD_000277 O10 O10 O 0 1 N N N 33.979 34.098 31.578 -7.561 -0.194 -1.781 ASP 5 O polymer 1 1 38 ? ? ? PRD_000277 C25 C25 C 0 1 N N N 34.431 31.465 30.604 -7.969 0.263 1.452 ASP 5 CB polymer 1 1 39 ? ? ? PRD_000277 C26 C26 C 0 1 N N N 33.763 30.692 29.465 -7.274 0.567 2.754 ASP 5 CG polymer 1 1 40 ? ? ? PRD_000277 O11 O11 O 0 1 N N N 33.539 31.274 28.363 -6.111 0.275 2.900 ASP 5 OD1 polymer 1 1 41 ? ? ? PRD_000277 O12 O12 O 0 1 N N N 33.459 29.508 29.656 -7.947 1.162 3.751 ASP 5 OD2 polymer 1 1 42 ? ? ? PRD_000277 C27 C27 C 0 1 N N N 36.320 34.486 31.790 -8.619 -2.026 -0.744 0QE 6 C1 polymer 1 1 43 ? ? ? PRD_000277 CL1 CL1 CL 0 0 N Y N ? ? ? -9.333 -2.262 -2.383 0QE 6 CL1 polymer 1 1 44 ? ? ? PRD_000277 H1 H1 H 0 1 N N N ? ? ? 7.749 -0.625 1.577 PHQ 1 H21 polymer 1 1 45 ? ? ? PRD_000277 H2 H2 H 0 1 N N N ? ? ? 6.773 -1.942 0.885 PHQ 1 H22 polymer 1 1 46 ? ? ? PRD_000277 H3 H3 H 0 1 N N N ? ? ? 9.920 -0.065 0.646 PHQ 1 H41 polymer 1 1 47 ? ? ? PRD_000277 H4 H4 H 0 1 N N N ? ? ? 11.889 -0.872 -0.594 PHQ 1 H51 polymer 1 1 48 ? ? ? PRD_000277 H5 H5 H 0 1 N N N ? ? ? 11.704 -2.853 -2.043 PHQ 1 H61 polymer 1 1 49 ? ? ? PRD_000277 H6 H6 H 0 1 N N N ? ? ? 9.550 -4.030 -2.252 PHQ 1 H71 polymer 1 1 50 ? ? ? PRD_000277 H7 H7 H 0 1 N N N ? ? ? 7.584 -3.228 -1.005 PHQ 1 H81 polymer 1 1 51 ? ? ? PRD_000277 H8 H8 H 0 1 N N N 43.446 28.570 22.230 5.192 1.609 -1.189 ASP 2 H polymer 1 1 52 ? ? ? PRD_000277 H9 H9 H 0 1 N N N 41.028 27.685 23.937 3.673 1.875 1.294 ASP 2 HA polymer 1 1 53 ? ? ? PRD_000277 H10 H10 H 0 1 N N N 43.795 28.404 25.020 3.315 3.125 -1.467 ASP 2 HB2 polymer 1 1 54 ? ? ? PRD_000277 H11 H11 H 0 1 N N N 42.398 27.808 25.980 2.344 3.533 -0.032 ASP 2 HB3 polymer 1 1 55 ? ? ? PRD_000277 H12 H12 H 0 1 N N N 44.665 25.144 24.515 5.104 5.988 -0.101 ASP 2 HD2 polymer 1 1 56 ? ? ? PRD_000277 H13 H13 H 0 1 N N N 39.843 29.107 25.128 1.035 1.917 0.744 GLU 3 H polymer 1 1 57 ? ? ? PRD_000277 H14 H14 H 0 1 N N N 40.697 31.980 25.194 0.338 -0.218 -1.122 GLU 3 HA polymer 1 1 58 ? ? ? PRD_000277 H15 H15 H 0 1 N N N 37.844 31.066 24.651 -0.034 -0.504 1.893 GLU 3 HB2 polymer 1 1 59 ? ? ? PRD_000277 H16 H16 H 0 1 N N N 38.539 32.717 24.511 -0.790 -1.561 0.676 GLU 3 HB3 polymer 1 1 60 ? ? ? PRD_000277 H17 H17 H 0 1 N N N 39.923 31.896 22.591 1.454 -2.188 -0.173 GLU 3 HG2 polymer 1 1 61 ? ? ? PRD_000277 H18 H18 H 0 1 N N N 39.038 30.336 22.686 2.210 -1.131 1.043 GLU 3 HG3 polymer 1 1 62 ? ? ? PRD_000277 H19 H19 H 0 1 N N N 37.390 32.946 20.551 2.203 -4.441 2.622 GLU 3 HE2 polymer 1 1 63 ? ? ? PRD_000277 H20 H20 H 0 1 N N N 39.320 33.195 26.821 -2.285 -0.643 -0.672 VAL 4 H polymer 1 1 64 ? ? ? PRD_000277 H21 H21 H 0 1 N N N 38.582 31.365 29.074 -3.572 1.792 0.300 VAL 4 HA polymer 1 1 65 ? ? ? PRD_000277 H22 H22 H 0 1 N N N 39.169 33.254 30.611 -4.744 2.170 -1.888 VAL 4 HB polymer 1 1 66 ? ? ? PRD_000277 H23 H23 H 0 0 N N N 41.622 32.975 30.405 -1.706 2.285 -2.124 VAL 4 HG11 polymer 1 1 67 ? ? ? PRD_000277 H24 H24 H 0 0 N N N 40.751 31.421 30.175 -2.886 3.332 -2.947 VAL 4 HG12 polymer 1 1 68 ? ? ? PRD_000277 H25 H25 H 0 0 N N N 41.400 32.306 28.753 -2.677 3.443 -1.183 VAL 4 HG13 polymer 1 1 69 ? ? ? PRD_000277 H26 H26 H 0 0 N N N 40.565 35.105 29.734 -4.416 -0.108 -2.810 VAL 4 HG21 polymer 1 1 70 ? ? ? PRD_000277 H27 H27 H 0 0 N N N 40.318 34.492 28.063 -3.777 1.128 -3.920 VAL 4 HG22 polymer 1 1 71 ? ? ? PRD_000277 H28 H28 H 0 0 N N N 38.922 35.109 29.010 -2.662 0.182 -2.904 VAL 4 HG23 polymer 1 1 72 ? ? ? PRD_000277 H29 H29 H 0 1 N N N 37.114 31.800 30.331 -6.074 1.486 0.205 ASP 5 H polymer 1 1 73 ? ? ? PRD_000277 H30 H30 H 0 1 N N N 34.678 33.121 29.226 -6.555 -1.290 0.972 ASP 5 HA polymer 1 1 74 ? ? ? PRD_000277 H31 H31 H 0 1 N N N 35.152 30.799 31.101 -8.331 1.191 1.008 ASP 5 HB2 polymer 1 1 75 ? ? ? PRD_000277 H32 H32 H 0 1 N N N 33.655 31.766 31.323 -8.811 -0.404 1.636 ASP 5 HB3 polymer 1 1 76 ? ? ? PRD_000277 H33 H33 H 0 1 N N N 33.056 29.154 28.872 -7.459 1.337 4.568 ASP 5 HD2 polymer 1 1 77 ? ? ? PRD_000277 H34 H34 H 0 1 N N N 36.805 34.191 32.732 -8.047 -2.911 -0.466 0QE 6 HA polymer 1 1 78 ? ? ? PRD_000277 H35 H35 H 0 1 N N N 36.726 35.452 31.455 -9.417 -1.866 -0.020 0QE 6 HB polymer 1 1 79 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000277 C1 O1 DOUB N N 1 PRD_000277 C1 O2 SING N N 2 PRD_000277 O2 C2 SING N N 3 PRD_000277 C2 C3 SING N N 4 PRD_000277 C2 H1 SING N N 5 PRD_000277 C2 H2 SING N N 6 PRD_000277 C3 C4 DOUB Y N 7 PRD_000277 C3 C8 SING Y N 8 PRD_000277 C4 C5 SING Y N 9 PRD_000277 C4 H3 SING N N 10 PRD_000277 C5 C6 DOUB Y N 11 PRD_000277 C5 H4 SING N N 12 PRD_000277 C6 C7 SING Y N 13 PRD_000277 C6 H5 SING N N 14 PRD_000277 C7 C8 DOUB Y N 15 PRD_000277 C7 H6 SING N N 16 PRD_000277 C8 H7 SING N N 17 PRD_000277 N1 C9 SING N N 18 PRD_000277 N1 H8 SING N N 19 PRD_000277 C9 C10 SING N N 20 PRD_000277 C9 C11 SING N N 21 PRD_000277 C9 H9 SING N N 22 PRD_000277 C10 O3 DOUB N N 23 PRD_000277 C11 C12 SING N N 24 PRD_000277 C11 H10 SING N N 25 PRD_000277 C11 H11 SING N N 26 PRD_000277 C12 O4 DOUB N N 27 PRD_000277 C12 O5 SING N N 28 PRD_000277 O5 H12 SING N N 29 PRD_000277 N2 C13 SING N N 30 PRD_000277 N2 H13 SING N N 31 PRD_000277 C13 C14 SING N N 32 PRD_000277 C13 C15 SING N N 33 PRD_000277 C13 H14 SING N N 34 PRD_000277 C14 O6 DOUB N N 35 PRD_000277 C15 C16 SING N N 36 PRD_000277 C15 H15 SING N N 37 PRD_000277 C15 H16 SING N N 38 PRD_000277 C16 C17 SING N N 39 PRD_000277 C16 H17 SING N N 40 PRD_000277 C16 H18 SING N N 41 PRD_000277 C17 O7 DOUB N N 42 PRD_000277 C17 O8 SING N N 43 PRD_000277 O8 H19 SING N N 44 PRD_000277 N3 C18 SING N N 45 PRD_000277 N3 H20 SING N N 46 PRD_000277 C18 C19 SING N N 47 PRD_000277 C18 C20 SING N N 48 PRD_000277 C18 H21 SING N N 49 PRD_000277 C19 O9 DOUB N N 50 PRD_000277 C20 C21 SING N N 51 PRD_000277 C20 C22 SING N N 52 PRD_000277 C20 H22 SING N N 53 PRD_000277 C21 H23 SING N N 54 PRD_000277 C21 H24 SING N N 55 PRD_000277 C21 H25 SING N N 56 PRD_000277 C22 H26 SING N N 57 PRD_000277 C22 H27 SING N N 58 PRD_000277 C22 H28 SING N N 59 PRD_000277 N4 C23 SING N N 60 PRD_000277 N4 H29 SING N N 61 PRD_000277 C23 C24 SING N N 62 PRD_000277 C23 C25 SING N N 63 PRD_000277 C23 H30 SING N N 64 PRD_000277 C24 O10 DOUB N N 65 PRD_000277 C25 C26 SING N N 66 PRD_000277 C25 H31 SING N N 67 PRD_000277 C25 H32 SING N N 68 PRD_000277 C26 O11 DOUB N N 69 PRD_000277 C26 O12 SING N N 70 PRD_000277 O12 H33 SING N N 71 PRD_000277 C27 CL1 SING N N 72 PRD_000277 C27 H34 SING N N 73 PRD_000277 C27 H35 SING N N 74 PRD_000277 C1 N1 SING N N 75 PRD_000277 C24 C27 SING N N 76 PRD_000277 C10 N2 SING N N 77 PRD_000277 C14 N3 SING N N 78 PRD_000277 C19 N4 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000277 SMILES ACDLabs 12.01 "ClCC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CC(=O)O)CCC(=O)O)C(C)C)CC(=O)O" PRD_000277 InChI InChI 1.03 "InChI=1S/C27H35ClN4O12/c1-14(2)23(26(42)30-17(10-21(36)37)19(33)12-28)32-24(40)16(8-9-20(34)35)29-25(41)18(11-22(38)39)31-27(43)44-13-15-6-4-3-5-7-15/h3-7,14,16-18,23H,8-13H2,1-2H3,(H,29,41)(H,30,42)(H,31,43)(H,32,40)(H,34,35)(H,36,37)(H,38,39)" PRD_000277 InChIKey InChI 1.03 GRXANEWUMQJHCJ-UHFFFAOYSA-N PRD_000277 SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)OCc1ccccc1)C(=O)N[C@@H](CC(O)=O)C(=O)CCl" PRD_000277 SMILES CACTVS 3.370 "CC(C)[CH](NC(=O)[CH](CCC(O)=O)NC(=O)[CH](CC(O)=O)NC(=O)OCc1ccccc1)C(=O)N[CH](CC(O)=O)C(=O)CCl" PRD_000277 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)CCl)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CC(=O)O)NC(=O)OCc1ccccc1" PRD_000277 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(=O)NC(CC(=O)O)C(=O)CCl)NC(=O)C(CCC(=O)O)NC(=O)C(CC(=O)O)NC(=O)OCc1ccccc1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000277 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-alpha-aspartyl-L-alpha-glutamyl-N-[(2S)-1-carboxy-4-chloro-3-oxobutan-2-yl]-L-valinamide" PRD_000277 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(4S)-5-[[(2S)-1-[[(3S)-5-chloranyl-1-oxidanyl-1,4-bis(oxidanylidene)pentan-3-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-5-oxidanylidene-4-[[(2S)-4-oxidanyl-4-oxidanylidene-2-(phenylmethoxycarbonylamino)butanoyl]amino]pentanoic acid" #