data_PRDCC_000301 # _chem_comp.id PRD_000301 _chem_comp.name "N-(2-oxoethyl)-L-isoleucyl-L-alpha-glutamyl-N-[(1R)-2-carboxy-1-formylethyl]-L-threoninamide" _chem_comp.formula "C21 H36 N4 O10" _chem_comp.formula_weight 504.531 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000301 C1 C1 C 0 1 N N N -7.186 31.981 48.898 6.381 0.150 0.738 ACE 1 C polymer 1 1 1 ? ? ? PRD_000301 O1 O1 O 0 1 N N N -6.444 32.767 48.313 5.739 -0.454 1.572 ACE 1 O polymer 1 1 2 ? ? ? PRD_000301 C2 C2 C 0 1 N N N -7.214 31.930 50.417 7.651 0.859 1.133 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000301 N1 N1 N 0 1 N N N -7.953 31.100 48.284 5.961 0.182 -0.542 ILE 2 N polymer 1 1 4 ? ? ? PRD_000301 C3 C3 C 0 1 N N S -8.024 31.036 46.813 4.730 -0.512 -0.926 ILE 2 CA polymer 1 1 5 ? ? ? PRD_000301 C4 C4 C 0 1 N N N -8.689 32.283 46.270 3.570 0.054 -0.149 ILE 2 C polymer 1 1 6 ? ? ? PRD_000301 O2 O2 O 0 1 N N N -9.505 32.926 46.918 3.770 0.667 0.879 ILE 2 O polymer 1 1 7 ? ? ? PRD_000301 C5 C5 C 0 1 N N S -8.872 29.798 46.421 4.869 -2.005 -0.620 ILE 2 CB polymer 1 1 8 ? ? ? PRD_000301 C6 C6 C 0 1 N N N -8.473 29.254 45.049 6.047 -2.580 -1.410 ILE 2 CG1 polymer 1 1 9 ? ? ? PRD_000301 C7 C7 C 0 1 N N N -10.342 30.066 46.531 3.583 -2.730 -1.022 ILE 2 CG2 polymer 1 1 10 ? ? ? PRD_000301 C8 C8 C 0 1 N N N -9.315 28.083 44.637 6.264 -4.041 -1.010 ILE 2 CD1 polymer 1 1 11 ? ? ? PRD_000301 N2 N2 N 0 1 N N N -8.236 32.708 45.095 2.310 -0.121 -0.595 GLU 3 N polymer 1 1 12 ? ? ? PRD_000301 C9 C9 C 0 1 N N S -8.731 33.909 44.436 1.182 0.430 0.161 GLU 3 CA polymer 1 1 13 ? ? ? PRD_000301 C10 C10 C 0 1 N N N -9.262 33.564 43.038 -0.062 -0.365 -0.142 GLU 3 C polymer 1 1 14 ? ? ? PRD_000301 O3 O3 O 0 1 N N N -8.914 32.484 42.510 -0.011 -1.299 -0.914 GLU 3 O polymer 1 1 15 ? ? ? PRD_000301 C11 C11 C 0 1 N N N -7.615 34.955 44.319 0.965 1.890 -0.238 GLU 3 CB polymer 1 1 16 ? ? ? PRD_000301 C12 C12 C 0 1 N N N -7.086 35.360 45.705 2.179 2.720 0.184 GLU 3 CG polymer 1 1 17 ? ? ? PRD_000301 C13 C13 C 0 1 N N N -6.070 36.448 45.679 1.965 4.159 -0.210 GLU 3 CD polymer 1 1 18 ? ? ? PRD_000301 O4 O4 O 0 1 N N N -5.613 36.939 44.639 0.946 4.487 -0.770 GLU 3 OE1 polymer 1 1 19 ? ? ? PRD_000301 O5 O5 O 0 1 N N N -5.709 36.930 46.830 2.906 5.077 0.062 GLU 3 OE2 polymer 1 1 20 ? ? ? PRD_000301 N3 N3 N 0 1 N N N -10.065 34.423 42.479 -1.230 -0.037 0.444 THR 4 N polymer 1 1 21 ? ? ? PRD_000301 C14 C14 C 0 1 N N S -10.591 34.209 41.147 -2.440 -0.810 0.148 THR 4 CA polymer 1 1 22 ? ? ? PRD_000301 C15 C15 C 0 1 N N N -9.904 35.112 40.138 -3.655 0.049 0.388 THR 4 C polymer 1 1 23 ? ? ? PRD_000301 O6 O6 O 0 1 N N N -9.516 36.234 40.433 -3.524 1.193 0.768 THR 4 O polymer 1 1 24 ? ? ? PRD_000301 C16 C16 C 0 1 N N R -12.109 34.436 41.083 -2.496 -2.038 1.059 THR 4 CB polymer 1 1 25 ? ? ? PRD_000301 O7 O7 O 0 1 N N N -12.435 35.725 41.566 -2.638 -1.618 2.418 THR 4 OG1 polymer 1 1 26 ? ? ? PRD_000301 C17 C17 C 0 1 N N N -12.852 33.412 41.878 -1.204 -2.845 0.907 THR 4 CG2 polymer 1 1 27 ? ? ? PRD_000301 C18 C18 C 0 1 N N N -10.595 35.908 37.036 -6.453 0.318 1.892 ASJ 5 C polymer 1 1 28 ? ? ? PRD_000301 N4 N4 N 0 1 N N N -9.794 34.617 38.910 -4.887 -0.455 0.180 ASJ 5 N polymer 1 1 29 ? ? ? PRD_000301 O8 O8 O 0 1 N N N -10.286 36.748 35.959 -6.858 -1.011 2.224 ASJ 5 O polymer 1 1 30 ? ? ? PRD_000301 C19 C19 C 0 1 N N S -9.383 35.442 37.779 -6.069 0.380 0.413 ASJ 5 CA polymer 1 1 31 ? ? ? PRD_000301 C20 C20 C 0 1 N N N -8.478 34.590 36.838 -7.232 -0.134 -0.438 ASJ 5 CB polymer 1 1 32 ? ? ? PRD_000301 C21 C21 C 0 1 N N N -7.047 34.539 37.348 -6.902 0.041 -1.898 ASJ 5 CG polymer 1 1 33 ? ? ? PRD_000301 O9 O9 O 0 1 N N N -6.641 35.389 38.158 -7.782 -0.343 -2.836 ASJ 5 OD1 polymer 1 1 34 ? ? ? PRD_000301 O10 O10 O 0 1 N N N -6.283 33.617 36.938 -5.845 0.526 -2.225 ASJ 5 OD2 polymer 1 1 35 ? ? ? PRD_000301 H1 H1 H 0 1 N N N -6.505 32.667 50.822 7.829 0.719 2.199 ACE 1 H1 polymer 1 1 36 ? ? ? PRD_000301 H2 H2 H 0 1 N N N -8.228 32.163 50.773 8.487 0.448 0.567 ACE 1 H2 polymer 1 1 37 ? ? ? PRD_000301 H3 H3 H 0 1 N N N -6.929 30.923 50.755 7.555 1.923 0.918 ACE 1 H3 polymer 1 1 38 ? ? ? PRD_000301 H4 H4 H 0 1 N N N -8.498 30.462 48.828 6.474 0.665 -1.209 ILE 2 H polymer 1 1 39 ? ? ? PRD_000301 H5 H5 H 0 1 N N N -7.015 30.936 46.386 4.553 -0.375 -1.993 ILE 2 HA polymer 1 1 40 ? ? ? PRD_000301 H6 H6 H 0 1 N N N -8.633 29.013 47.153 5.045 -2.142 0.447 ILE 2 HB polymer 1 1 41 ? ? ? PRD_000301 H7 H7 H 0 0 N N N -8.590 30.054 44.303 5.831 -2.523 -2.477 ILE 2 HG12 polymer 1 1 42 ? ? ? PRD_000301 H8 H8 H 0 0 N N N -7.420 28.938 45.086 6.946 -2.005 -1.190 ILE 2 HG13 polymer 1 1 43 ? ? ? PRD_000301 H9 H9 H 0 0 N N N -10.902 29.164 46.244 3.407 -2.593 -2.089 ILE 2 HG21 polymer 1 1 44 ? ? ? PRD_000301 H10 H10 H 0 0 N N N -10.589 30.337 47.568 3.682 -3.794 -0.804 ILE 2 HG22 polymer 1 1 45 ? ? ? PRD_000301 H11 H11 H 0 0 N N N -10.615 30.895 45.861 2.744 -2.321 -0.460 ILE 2 HG23 polymer 1 1 46 ? ? ? PRD_000301 H12 H12 H 0 0 N N N -8.991 27.728 43.647 5.364 -4.615 -1.230 ILE 2 HD11 polymer 1 1 47 ? ? ? PRD_000301 H13 H13 H 0 0 N N N -9.201 27.273 45.372 7.103 -4.450 -1.573 ILE 2 HD12 polymer 1 1 48 ? ? ? PRD_000301 H14 H14 H 0 0 N N N -10.370 28.389 44.589 6.480 -4.097 0.057 ILE 2 HD13 polymer 1 1 49 ? ? ? PRD_000301 H15 H15 H 0 1 N N N -7.520 32.177 44.641 2.150 -0.611 -1.416 GLU 3 H polymer 1 1 50 ? ? ? PRD_000301 H16 H16 H 0 1 N N N -9.554 34.340 45.026 1.398 0.373 1.228 GLU 3 HA polymer 1 1 51 ? ? ? PRD_000301 H17 H17 H 0 1 N N N -6.788 34.533 43.728 0.837 1.956 -1.319 GLU 3 HB2 polymer 1 1 52 ? ? ? PRD_000301 H18 H18 H 0 1 N N N -8.011 35.847 43.811 0.073 2.274 0.257 GLU 3 HB3 polymer 1 1 53 ? ? ? PRD_000301 H19 H19 H 0 1 N N N -7.938 35.698 46.313 2.306 2.655 1.264 GLU 3 HG2 polymer 1 1 54 ? ? ? PRD_000301 H20 H20 H 0 1 N N N -6.631 34.474 46.172 3.071 2.337 -0.312 GLU 3 HG3 polymer 1 1 55 ? ? ? PRD_000301 H21 H21 H 0 1 N N N -5.099 37.646 46.697 2.724 5.987 -0.209 GLU 3 HE2 polymer 1 1 56 ? ? ? PRD_000301 H22 H22 H 0 1 N N N -10.324 35.248 42.980 -1.271 0.710 1.061 THR 4 H polymer 1 1 57 ? ? ? PRD_000301 H23 H23 H 0 1 N N N -10.397 33.167 40.854 -2.421 -1.130 -0.893 THR 4 HA polymer 1 1 58 ? ? ? PRD_000301 H24 H24 H 0 1 N N N -12.419 34.350 40.031 -3.347 -2.659 0.780 THR 4 HB polymer 1 1 59 ? ? ? PRD_000301 H25 H25 H 0 1 N N N -13.375 35.852 41.521 -2.680 -2.346 3.052 THR 4 HG1 polymer 1 1 60 ? ? ? PRD_000301 H26 H26 H 0 0 N N N -13.932 33.606 41.809 -0.353 -2.224 1.186 THR 4 HG21 polymer 1 1 61 ? ? ? PRD_000301 H27 H27 H 0 0 N N N -12.634 32.410 41.480 -1.244 -3.720 1.556 THR 4 HG22 polymer 1 1 62 ? ? ? PRD_000301 H28 H28 H 0 0 N N N -12.537 33.466 42.931 -1.096 -3.165 -0.129 THR 4 HG23 polymer 1 1 63 ? ? ? PRD_000301 H29 H29 H 0 1 N N N -11.245 36.457 37.734 -7.276 1.007 2.083 ASJ 5 H3 polymer 1 1 64 ? ? ? PRD_000301 H30 H30 H 0 1 N Y N -11.131 35.028 36.652 -5.595 0.600 2.503 ASJ 5 HAA polymer 1 1 65 ? ? ? PRD_000301 H31 H31 H 0 1 N N N -9.999 33.650 38.756 -4.992 -1.370 -0.124 ASJ 5 H polymer 1 1 66 ? ? ? PRD_000301 H32 H32 H 0 1 N N N -11.088 37.014 35.524 -7.117 -1.124 3.149 ASJ 5 HO polymer 1 1 67 ? ? ? PRD_000301 H33 H33 H 0 1 N N N -8.809 36.311 38.132 -5.845 1.411 0.138 ASJ 5 HA polymer 1 1 68 ? ? ? PRD_000301 H34 H34 H 0 1 N N N -8.877 33.566 36.787 -7.398 -1.190 -0.227 ASJ 5 HB polymer 1 1 69 ? ? ? PRD_000301 H35 H35 H 0 1 N N N -8.485 35.037 35.833 -8.134 0.430 -0.200 ASJ 5 HBA polymer 1 1 70 ? ? ? PRD_000301 H36 H36 H 0 0 N N N -5.733 35.212 38.375 -7.526 -0.211 -3.759 ASJ 5 HOD1 polymer 1 1 71 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000301 C1 O1 DOUB N N 1 PRD_000301 C1 C2 SING N N 2 PRD_000301 C2 H1 SING N N 3 PRD_000301 C2 H2 SING N N 4 PRD_000301 C2 H3 SING N N 5 PRD_000301 N1 C3 SING N N 6 PRD_000301 N1 H4 SING N N 7 PRD_000301 C3 C4 SING N N 8 PRD_000301 C3 C5 SING N N 9 PRD_000301 C3 H5 SING N N 10 PRD_000301 C4 O2 DOUB N N 11 PRD_000301 C5 C6 SING N N 12 PRD_000301 C5 C7 SING N N 13 PRD_000301 C5 H6 SING N N 14 PRD_000301 C6 C8 SING N N 15 PRD_000301 C6 H7 SING N N 16 PRD_000301 C6 H8 SING N N 17 PRD_000301 C7 H9 SING N N 18 PRD_000301 C7 H10 SING N N 19 PRD_000301 C7 H11 SING N N 20 PRD_000301 C8 H12 SING N N 21 PRD_000301 C8 H13 SING N N 22 PRD_000301 C8 H14 SING N N 23 PRD_000301 N2 C9 SING N N 24 PRD_000301 N2 H15 SING N N 25 PRD_000301 C9 C10 SING N N 26 PRD_000301 C9 C11 SING N N 27 PRD_000301 C9 H16 SING N N 28 PRD_000301 C10 O3 DOUB N N 29 PRD_000301 C11 C12 SING N N 30 PRD_000301 C11 H17 SING N N 31 PRD_000301 C11 H18 SING N N 32 PRD_000301 C12 C13 SING N N 33 PRD_000301 C12 H19 SING N N 34 PRD_000301 C12 H20 SING N N 35 PRD_000301 C13 O4 DOUB N N 36 PRD_000301 C13 O5 SING N N 37 PRD_000301 O5 H21 SING N N 38 PRD_000301 N3 C14 SING N N 39 PRD_000301 N3 H22 SING N N 40 PRD_000301 C14 C15 SING N N 41 PRD_000301 C14 C16 SING N N 42 PRD_000301 C14 H23 SING N N 43 PRD_000301 C15 O6 DOUB N N 44 PRD_000301 C16 O7 SING N N 45 PRD_000301 C16 C17 SING N N 46 PRD_000301 C16 H24 SING N N 47 PRD_000301 O7 H25 SING N N 48 PRD_000301 C17 H26 SING N N 49 PRD_000301 C17 H27 SING N N 50 PRD_000301 C17 H28 SING N N 51 PRD_000301 C18 O8 SING N N 52 PRD_000301 C18 C19 SING N N 53 PRD_000301 C18 H29 SING N N 54 PRD_000301 C18 H30 SING N N 55 PRD_000301 C19 N4 SING N N 56 PRD_000301 N4 H31 SING N N 57 PRD_000301 O8 H32 SING N N 58 PRD_000301 C20 C19 SING N N 59 PRD_000301 C19 H33 SING N N 60 PRD_000301 C20 C21 SING N N 61 PRD_000301 C20 H34 SING N N 62 PRD_000301 C20 H35 SING N N 63 PRD_000301 C21 O10 DOUB N N 64 PRD_000301 C21 O9 SING N N 65 PRD_000301 O9 H36 SING N N 66 PRD_000301 C1 N1 SING N N 67 PRD_000301 C15 N4 SING N N 68 PRD_000301 C4 N2 SING N N 69 PRD_000301 C10 N3 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000301 SMILES ACDLabs 12.01 "O=C(NC(CC(=O)O)CO)C(NC(=O)C(NC(=O)C(NC(=O)C)C(C)CC)CCC(=O)O)C(O)C" PRD_000301 InChI InChI 1.03 "InChI=1S/C21H36N4O10/c1-5-10(2)17(22-12(4)28)20(34)24-14(6-7-15(29)30)19(33)25-18(11(3)27)21(35)23-13(9-26)8-16(31)32/h10-11,13-14,17-18,26-27H,5-9H2,1-4H3,(H,22,28)(H,23,35)(H,24,34)(H,25,33)(H,29,30)(H,31,32)" PRD_000301 InChIKey InChI 1.03 UKJANCPUSFCDHJ-UHFFFAOYSA-N PRD_000301 SMILES_CANONICAL CACTVS 3.370 "CC[C@H](C)[C@H](NC(C)=O)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H](CO)CC(O)=O" PRD_000301 SMILES CACTVS 3.370 "CC[CH](C)[CH](NC(C)=O)C(=O)N[CH](CCC(O)=O)C(=O)N[CH]([CH](C)O)C(=O)N[CH](CO)CC(O)=O" PRD_000301 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC[C@H](C)[C@@H](C(=O)N[C@@H](CCC(=O)O)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CC(=O)O)CO)NC(=O)C" PRD_000301 SMILES "OpenEye OEToolkits" 1.7.6 "CCC(C)C(C(=O)NC(CCC(=O)O)C(=O)NC(C(C)O)C(=O)NC(CC(=O)O)CO)NC(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000301 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-isoleucyl-L-alpha-glutamyl-N-[(2R)-1-carboxy-3-hydroxypropan-2-yl]-L-threoninamide" PRD_000301 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(4S)-4-[[(2S,3S)-2-acetamido-3-methyl-pentanoyl]amino]-5-[[(2S,3R)-1-[[(2S)-1,4-bis(oxidanyl)-4-oxidanylidene-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-5-oxidanylidene-pentanoic acid" #