data_PRDCC_000306
#
_chem_comp.id PRD_000306
_chem_comp.name "KPFS-(CH2-NH)-LQF peptidomimetic inhibitor of PfPM1"
_chem_comp.formula "C49 H77 N10 O10"
_chem_comp.formula_weight 966.197
_chem_comp.pdbx_release_status REF_ONLY
_chem_comp.type peptide-like
_chem_comp.pdbx_type ?
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge ?
_chem_comp.pdbx_initial_date ?
_chem_comp.pdbx_modified_date ?
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ?
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag ?
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag ?
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_pcm ?
_chem_comp.pdbx_processing_site ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_ref_id
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
PRD_000306 N1 N1 N 0 1 N N N -53.416 10.296 63.809 11.517 2.011 -1.012 LYS 1 N polymer 1 1 1 ? ? ?
PRD_000306 C1 C1 C 0 1 N N S -52.133 10.940 63.328 10.549 2.373 0.032 LYS 1 CA polymer 1 1 2 ? ? ?
PRD_000306 C2 C2 C 0 1 N N N -51.466 9.996 62.315 9.793 1.143 0.465 LYS 1 C polymer 1 1 3 ? ? ?
PRD_000306 O1 O1 O 0 1 N N N -51.560 8.769 62.448 9.757 0.169 -0.256 LYS 1 O polymer 1 1 4 ? ? ?
PRD_000306 C3 C3 C 0 1 N N N -51.202 11.196 64.536 9.566 3.407 -0.522 LYS 1 CB polymer 1 1 5 ? ? ?
PRD_000306 C4 C4 C 0 1 N N N -51.971 11.745 65.745 10.315 4.701 -0.846 LYS 1 CG polymer 1 1 6 ? ? ?
PRD_000306 C5 C5 C 0 1 N N N -51.019 12.082 66.897 9.332 5.734 -1.400 LYS 1 CD polymer 1 1 7 ? ? ?
PRD_000306 C6 C6 C 0 1 N N N -51.805 12.241 68.208 10.081 7.028 -1.724 LYS 1 CE polymer 1 1 8 ? ? ?
PRD_000306 N2 N2 N 1 1 N N N -50.915 12.684 69.327 9.137 8.021 -2.255 LYS 1 NZ polymer 1 1 9 ? ? ?
PRD_000306 N3 N3 N 0 1 N N N -50.792 10.543 61.303 9.158 1.126 1.653 PRO 2 N polymer 1 1 10 ? ? ?
PRD_000306 C7 C7 C 0 1 N N S -50.149 9.661 60.332 8.288 0.048 2.145 PRO 2 CA polymer 1 1 11 ? ? ?
PRD_000306 C8 C8 C 0 1 N N N -48.863 9.020 60.902 7.129 -0.146 1.200 PRO 2 C polymer 1 1 12 ? ? ?
PRD_000306 O2 O2 O 0 1 N N N -47.913 9.738 61.282 7.031 0.549 0.211 PRO 2 O polymer 1 1 13 ? ? ?
PRD_000306 C9 C9 C 0 1 N N N -49.867 10.600 59.179 7.767 0.476 3.533 PRO 2 CB polymer 1 1 14 ? ? ?
PRD_000306 C10 C10 C 0 1 N N N -49.530 11.898 59.835 7.921 2.020 3.501 PRO 2 CG polymer 1 1 15 ? ? ?
PRD_000306 C11 C11 C 0 1 N N N -50.208 11.892 61.236 9.226 2.183 2.679 PRO 2 CD polymer 1 1 16 ? ? ?
PRD_000306 N4 N4 N 0 1 N N N -48.807 7.679 60.935 6.203 -1.091 1.455 PHE 3 N polymer 1 1 17 ? ? ?
PRD_000306 C12 C12 C 0 1 N N S -47.639 6.988 61.500 5.141 -1.357 0.481 PHE 3 CA polymer 1 1 18 ? ? ?
PRD_000306 C13 C13 C 0 1 N N N -46.305 7.446 60.897 3.849 -1.627 1.208 PHE 3 C polymer 1 1 19 ? ? ?
PRD_000306 O3 O3 O 0 1 N N N -45.874 6.949 59.840 3.818 -1.600 2.420 PHE 3 O polymer 1 1 20 ? ? ?
PRD_000306 C14 C14 C 0 1 N N N -47.755 5.490 61.306 5.517 -2.578 -0.362 PHE 3 CB polymer 1 1 21 ? ? ?
PRD_000306 C15 C15 C 0 1 Y N N -47.046 4.693 62.370 6.722 -2.254 -1.206 PHE 3 CG polymer 1 1 22 ? ? ?
PRD_000306 C16 C16 C 0 1 Y N N -47.754 4.168 63.446 7.988 -2.581 -0.758 PHE 3 CD1 polymer 1 1 23 ? ? ?
PRD_000306 C17 C17 C 0 1 Y N N -45.669 4.515 62.327 6.562 -1.635 -2.432 PHE 3 CD2 polymer 1 1 24 ? ? ?
PRD_000306 C18 C18 C 0 1 Y N N -47.100 3.478 64.449 9.094 -2.284 -1.532 PHE 3 CE1 polymer 1 1 25 ? ? ?
PRD_000306 C19 C19 C 0 1 Y N N -45.011 3.827 63.325 7.667 -1.337 -3.206 PHE 3 CE2 polymer 1 1 26 ? ? ?
PRD_000306 C20 C20 C 0 1 Y N N -45.725 3.310 64.394 8.934 -1.660 -2.755 PHE 3 CZ polymer 1 1 27 ? ? ?
PRD_000306 N5 N5 N 0 1 N N N -45.648 8.383 61.583 2.728 -1.899 0.511 SER 4 N polymer 1 1 28 ? ? ?
PRD_000306 C21 C21 C 0 1 N N S -44.382 8.922 61.121 1.472 -2.161 1.218 SER 4 CA polymer 1 1 29 ? ? ?
PRD_000306 C22 C22 C 0 1 N N N -43.555 9.328 62.329 0.573 -3.003 0.350 SER 4 C polymer 1 1 30 ? ? ?
PRD_000306 O4 O4 O 0 1 N N N -44.009 10.105 63.163 0.945 -3.350 -0.751 SER 4 O polymer 1 1 31 ? ? ?
PRD_000306 C23 C23 C 0 1 N N N -44.619 10.133 60.226 0.778 -0.834 1.535 SER 4 CB polymer 1 1 32 ? ? ?
PRD_000306 O5 O5 O 0 1 N N N -43.394 10.668 59.772 0.399 -0.192 0.315 SER 4 OG polymer 1 1 33 ? ? ?
PRD_000306 N6 N6 N 0 1 N N N -42.336 8.808 62.444 -0.644 -3.371 0.797 DCL 5 N polymer 1 1 34 ? ? ?
PRD_000306 C24 C24 C 0 1 N N S -41.539 9.127 63.621 -1.518 -4.189 -0.047 DCL 5 CA polymer 1 1 35 ? ? ?
PRD_000306 C25 C25 C 0 1 N N N -40.529 10.227 63.322 -2.976 -3.959 0.353 DCL 5 C polymer 1 1 36 ? ? ?
PRD_000306 C26 C26 C 0 1 N N N -40.805 7.882 64.122 -1.166 -5.667 0.136 DCL 5 CB polymer 1 1 37 ? ? ?
PRD_000306 C27 C27 C 0 1 N N N -41.705 6.816 64.757 0.251 -5.922 -0.381 DCL 5 CG polymer 1 1 38 ? ? ?
PRD_000306 C28 C28 C 0 1 N N N -40.842 5.649 65.236 0.650 -7.369 -0.084 DCL 5 CD1 polymer 1 1 39 ? ? ?
PRD_000306 C29 C29 C 0 1 N N N -42.512 7.378 65.932 0.294 -5.681 -1.891 DCL 5 CD2 polymer 1 1 40 ? ? ?
PRD_000306 N7 N7 N 0 1 N N N -40.978 11.096 62.246 -3.280 -2.523 0.291 LEU 6 N polymer 1 1 41 ? ? ?
PRD_000306 C30 C30 C 0 1 N N S -40.099 12.242 61.993 -4.636 -2.250 0.785 LEU 6 CA polymer 1 1 42 ? ? ?
PRD_000306 C31 C31 C 0 1 N N N -40.117 13.181 63.196 -5.167 -1.001 0.129 LEU 6 C polymer 1 1 43 ? ? ?
PRD_000306 O6 O6 O 0 1 N N N -41.188 13.413 63.753 -4.403 -0.217 -0.392 LEU 6 O polymer 1 1 44 ? ? ?
PRD_000306 C32 C32 C 0 1 N N N -40.595 12.971 60.745 -4.596 -2.052 2.302 LEU 6 CB polymer 1 1 45 ? ? ?
PRD_000306 C33 C33 C 0 1 N N N -39.574 13.904 60.122 -6.012 -1.789 2.819 LEU 6 CG polymer 1 1 46 ? ? ?
PRD_000306 C34 C34 C 0 1 N N N -38.323 13.126 59.753 -6.854 -3.057 2.668 LEU 6 CD1 polymer 1 1 47 ? ? ?
PRD_000306 C35 C35 C 0 1 N N N -40.166 14.558 58.904 -5.950 -1.390 4.294 LEU 6 CD2 polymer 1 1 48 ? ? ?
PRD_000306 N8 N8 N 0 1 N N N -38.967 13.729 63.605 -6.493 -0.756 0.122 GLN 7 N polymer 1 1 49 ? ? ?
PRD_000306 C36 C36 C 0 1 N N S -38.995 14.665 64.726 -7.021 0.389 -0.623 GLN 7 CA polymer 1 1 50 ? ? ?
PRD_000306 C37 C37 C 0 1 N N N -38.866 16.139 64.384 -8.335 0.818 -0.021 GLN 7 C polymer 1 1 51 ? ? ?
PRD_000306 O7 O7 O 0 1 N N N -38.140 16.502 63.455 -8.785 0.225 0.936 GLN 7 O polymer 1 1 52 ? ? ?
PRD_000306 C38 C38 C 0 1 N N N -37.948 14.300 65.786 -7.236 -0.009 -2.085 GLN 7 CB polymer 1 1 53 ? ? ?
PRD_000306 C39 C39 C 0 1 N N N -36.528 14.111 65.340 -5.885 -0.324 -2.731 GLN 7 CG polymer 1 1 54 ? ? ?
PRD_000306 C40 C40 C 0 1 N N N -35.532 14.037 66.495 -6.097 -0.716 -4.171 GLN 7 CD polymer 1 1 55 ? ? ?
PRD_000306 O8 O8 O 0 1 N N N -34.345 13.802 66.257 -7.217 -0.741 -4.634 GLN 7 OE1 polymer 1 1 56 ? ? ?
PRD_000306 N9 N9 N 0 1 N N N -35.997 14.252 67.730 -5.040 -1.039 -4.943 GLN 7 NE2 polymer 1 1 57 ? ? ?
PRD_000306 N10 N10 N 0 1 N N N -39.592 16.972 65.145 -9.009 1.859 -0.547 PHE 8 N polymer 1 1 58 ? ? ?
PRD_000306 C41 C41 C 0 1 N N S -39.491 18.421 65.047 -10.286 2.276 0.038 PHE 8 CA polymer 1 1 59 ? ? ?
PRD_000306 C42 C42 C 0 1 N N N -39.368 18.967 66.463 -11.401 1.446 -0.545 PHE 8 C polymer 1 1 60 ? ? ?
PRD_000306 O9 O9 O 0 1 N N N -40.132 19.891 66.835 -11.153 0.594 -1.366 PHE 8 O polymer 1 1 61 ? ? ?
PRD_000306 C43 C43 C 0 1 N N N -40.711 19.020 64.374 -10.533 3.753 -0.274 PHE 8 CB polymer 1 1 62 ? ? ?
PRD_000306 C44 C44 C 0 1 Y N N -40.792 18.735 62.923 -9.487 4.593 0.412 PHE 8 CG polymer 1 1 63 ? ? ?
PRD_000306 C45 C45 C 0 1 Y N N -41.356 17.554 62.477 -8.304 4.892 -0.238 PHE 8 CD1 polymer 1 1 64 ? ? ?
PRD_000306 C46 C46 C 0 1 Y N N -40.341 19.658 61.991 -9.713 5.070 1.690 PHE 8 CD2 polymer 1 1 65 ? ? ?
PRD_000306 C47 C47 C 0 1 Y N N -41.481 17.298 61.109 -7.345 5.662 0.392 PHE 8 CE1 polymer 1 1 66 ? ? ?
PRD_000306 C48 C48 C 0 1 Y N N -40.461 19.410 60.625 -8.753 5.840 2.320 PHE 8 CE2 polymer 1 1 67 ? ? ?
PRD_000306 C49 C49 C 0 1 Y N N -41.029 18.233 60.185 -7.568 6.135 1.672 PHE 8 CZ polymer 1 1 68 ? ? ?
PRD_000306 O10 O10 O 0 1 N Y N -38.490 18.447 67.191 -12.667 1.653 -0.154 PHE 8 OXT polymer 1 1 69 ? ? ?
PRD_000306 H1 H1 H 0 1 N N N -53.864 10.898 64.470 12.216 1.378 -0.652 LYS 1 H polymer 1 1 70 ? ? ?
PRD_000306 H2 H2 H 0 1 N Y N -54.025 10.144 63.030 11.052 1.617 -1.816 LYS 1 H2 polymer 1 1 71 ? ? ?
PRD_000306 H3 H3 H 0 1 N N N -52.361 11.898 62.838 11.076 2.795 0.887 LYS 1 HA polymer 1 1 72 ? ? ?
PRD_000306 H4 H4 H 0 1 N N N -50.721 10.249 64.821 9.103 3.018 -1.429 LYS 1 HB2 polymer 1 1 73 ? ? ?
PRD_000306 H5 H5 H 0 1 N N N -50.432 11.925 64.243 8.795 3.609 0.221 LYS 1 HB3 polymer 1 1 74 ? ? ?
PRD_000306 H6 H6 H 0 1 N N N -52.509 12.656 65.445 10.778 5.089 0.061 LYS 1 HG2 polymer 1 1 75 ? ? ?
PRD_000306 H7 H7 H 0 1 N N N -52.693 10.988 66.085 11.086 4.498 -1.589 LYS 1 HG3 polymer 1 1 76 ? ? ?
PRD_000306 H8 H8 H 0 1 N N N -50.285 11.271 67.010 8.869 5.346 -2.307 LYS 1 HD2 polymer 1 1 77 ? ? ?
PRD_000306 H9 H9 H 0 1 N N N -50.495 13.022 66.672 8.561 5.937 -0.656 LYS 1 HD3 polymer 1 1 78 ? ? ?
PRD_000306 H10 H10 H 0 1 N N N -52.597 12.990 68.062 10.544 7.417 -0.817 LYS 1 HE2 polymer 1 1 79 ? ? ?
PRD_000306 H11 H11 H 0 1 N N N -52.259 11.275 68.473 10.852 6.825 -2.467 LYS 1 HE3 polymer 1 1 80 ? ? ?
PRD_000306 H12 H12 H 0 1 N N N -51.453 12.778 70.164 8.709 7.661 -3.095 LYS 1 HZ1 polymer 1 1 81 ? ? ?
PRD_000306 H13 H13 H 0 1 N N N -50.195 12.005 69.469 8.424 8.208 -1.567 LYS 1 HZ2 polymer 1 1 82 ? ? ?
PRD_000306 H14 H14 H 0 1 N N N -50.502 13.565 69.095 9.632 8.874 -2.469 LYS 1 HZ3 polymer 1 1 83 ? ? ?
PRD_000306 H15 H15 H 0 1 N N N -50.841 8.869 60.009 8.856 -0.878 2.229 PRO 2 HA polymer 1 1 84 ? ? ?
PRD_000306 H16 H16 H 0 1 N N N -49.021 10.236 58.578 6.721 0.196 3.656 PRO 2 HB2 polymer 1 1 85 ? ? ?
PRD_000306 H17 H17 H 0 1 N N N -50.754 10.706 58.537 8.379 0.044 4.324 PRO 2 HB3 polymer 1 1 86 ? ? ?
PRD_000306 H18 H18 H 0 1 N N N -48.440 11.994 59.944 7.076 2.486 2.995 PRO 2 HG2 polymer 1 1 87 ? ? ?
PRD_000306 H19 H19 H 0 1 N N N -49.914 12.735 59.234 8.042 2.421 4.507 PRO 2 HG3 polymer 1 1 88 ? ? ?
PRD_000306 H20 H20 H 0 1 N N N -50.987 12.666 61.304 10.099 2.038 3.316 PRO 2 HD2 polymer 1 1 89 ? ? ?
PRD_000306 H21 H21 H 0 1 N N N -49.469 12.045 62.036 9.258 3.166 2.210 PRO 2 HD3 polymer 1 1 90 ? ? ?
PRD_000306 H22 H22 H 0 1 N N N -49.569 7.144 60.571 6.240 -1.595 2.283 PHE 3 H polymer 1 1 91 ? ? ?
PRD_000306 H23 H23 H 0 1 N N N -47.604 7.188 62.581 5.019 -0.491 -0.169 PHE 3 HA polymer 1 1 92 ? ? ?
PRD_000306 H24 H24 H 0 1 N N N -48.821 5.218 61.319 5.748 -3.416 0.295 PHE 3 HB2 polymer 1 1 93 ? ? ?
PRD_000306 H25 H25 H 0 1 N N N -47.322 5.230 60.329 4.681 -2.843 -1.009 PHE 3 HB3 polymer 1 1 94 ? ? ?
PRD_000306 H26 H26 H 0 1 N N N -48.825 4.301 63.498 8.113 -3.069 0.198 PHE 3 HD1 polymer 1 1 95 ? ? ?
PRD_000306 H27 H27 H 0 1 N N N -45.105 4.921 61.500 5.572 -1.383 -2.784 PHE 3 HD2 polymer 1 1 96 ? ? ?
PRD_000306 H28 H28 H 0 1 N N N -47.661 3.069 65.277 10.083 -2.539 -1.181 PHE 3 HE1 polymer 1 1 97 ? ? ?
PRD_000306 H29 H29 H 0 1 N N N -43.941 3.691 63.273 7.542 -0.854 -4.163 PHE 3 HE2 polymer 1 1 98 ? ? ?
PRD_000306 H30 H30 H 0 1 N N N -45.212 2.778 65.182 9.798 -1.427 -3.360 PHE 3 HZ polymer 1 1 99 ? ? ?
PRD_000306 H31 H31 H 0 1 N N N -46.038 8.723 62.439 2.753 -1.921 -0.458 SER 4 H polymer 1 1 100 ? ? ?
PRD_000306 H32 H32 H 0 1 N N N -43.834 8.158 60.551 1.681 -2.692 2.147 SER 4 HA polymer 1 1 101 ? ? ?
PRD_000306 H33 H33 H 0 1 N N N -45.223 9.828 59.359 -0.110 -1.024 2.137 SER 4 HB2 polymer 1 1 102 ? ? ?
PRD_000306 H34 H34 H 0 1 N N N -45.159 10.903 60.796 1.462 -0.190 2.087 SER 4 HB3 polymer 1 1 103 ? ? ?
PRD_000306 H35 H35 H 0 1 N N N -43.563 11.420 59.217 -0.047 0.656 0.440 SER 4 HG polymer 1 1 104 ? ? ?
PRD_000306 H36 H36 H 0 1 N N N -41.972 8.207 61.733 -0.942 -3.093 1.677 DCL 5 H polymer 1 1 105 ? ? ?
PRD_000306 H37 H37 H 0 1 N N N -42.205 9.479 64.423 -1.379 -3.910 -1.092 DCL 5 HA polymer 1 1 106 ? ? ?
PRD_000306 H38 H38 H 0 1 N N N -40.382 10.831 64.229 -3.631 -4.498 -0.331 DCL 5 HC1 polymer 1 1 107 ? ? ?
PRD_000306 H39 H39 H 0 1 N N N -39.575 9.764 63.031 -3.135 -4.320 1.369 DCL 5 HC2 polymer 1 1 108 ? ? ?
PRD_000306 H40 H40 H 0 1 N N N -40.284 7.425 63.268 -1.218 -5.924 1.194 DCL 5 HB1 polymer 1 1 109 ? ? ?
PRD_000306 H41 H41 H 0 1 N N N -40.068 8.199 64.874 -1.872 -6.281 -0.422 DCL 5 HB2 polymer 1 1 110 ? ? ?
PRD_000306 H42 H42 H 0 1 N N N -42.406 6.447 63.994 0.947 -5.245 0.116 DCL 5 HG polymer 1 1 111 ? ? ?
PRD_000306 H43 H43 H 0 0 N N N -41.484 4.881 65.693 -0.045 -8.046 -0.580 DCL 5 HD11 polymer 1 1 112 ? ? ?
PRD_000306 H44 H44 H 0 0 N N N -40.304 5.216 64.380 1.660 -7.551 -0.452 DCL 5 HD12 polymer 1 1 113 ? ? ?
PRD_000306 H45 H45 H 0 0 N N N -40.117 6.011 65.980 0.619 -7.541 0.992 DCL 5 HD13 polymer 1 1 114 ? ? ?
PRD_000306 H46 H46 H 0 0 N N N -43.142 6.584 66.358 -0.401 -6.358 -2.387 DCL 5 HD21 polymer 1 1 115 ? ? ?
PRD_000306 H47 H47 H 0 0 N N N -41.823 7.753 66.704 0.011 -4.650 -2.102 DCL 5 HD22 polymer 1 1 116 ? ? ?
PRD_000306 H48 H48 H 0 0 N N N -43.149 8.202 65.578 1.304 -5.862 -2.259 DCL 5 HD23 polymer 1 1 117 ? ? ?
PRD_000306 H49 H49 H 0 1 N N N -41.886 11.443 62.481 -3.158 -2.168 -0.645 LEU 6 H polymer 1 1 118 ? ? ?
PRD_000306 H50 H50 H 0 1 N N N -39.069 11.895 61.822 -5.286 -3.091 0.545 LEU 6 HA polymer 1 1 119 ? ? ?
PRD_000306 H51 H51 H 0 1 N N N -40.877 12.218 59.995 -4.198 -2.950 2.775 LEU 6 HB2 polymer 1 1 120 ? ? ?
PRD_000306 H52 H52 H 0 1 N N N -41.480 13.563 61.020 -3.958 -1.202 2.541 LEU 6 HB3 polymer 1 1 121 ? ? ?
PRD_000306 H53 H53 H 0 1 N N N -39.307 14.681 60.854 -6.465 -0.982 2.243 LEU 6 HG polymer 1 1 122 ? ? ?
PRD_000306 H54 H54 H 0 0 N N N -37.587 13.807 59.302 -6.425 -3.852 3.278 LEU 6 HD11 polymer 1 1 123 ? ? ?
PRD_000306 H55 H55 H 0 0 N N N -37.895 12.670 60.658 -7.874 -2.857 2.997 LEU 6 HD12 polymer 1 1 124 ? ? ?
PRD_000306 H56 H56 H 0 0 N N N -38.582 12.337 59.032 -6.863 -3.365 1.623 LEU 6 HD13 polymer 1 1 125 ? ? ?
PRD_000306 H57 H57 H 0 0 N N N -39.425 15.234 58.453 -5.350 -0.486 4.402 LEU 6 HD21 polymer 1 1 126 ? ? ?
PRD_000306 H58 H58 H 0 0 N N N -40.449 13.785 58.174 -6.959 -1.202 4.663 LEU 6 HD22 polymer 1 1 127 ? ? ?
PRD_000306 H59 H59 H 0 0 N N N -41.058 15.133 59.194 -5.497 -2.197 4.870 LEU 6 HD23 polymer 1 1 128 ? ? ?
PRD_000306 H60 H60 H 0 1 N N N -38.105 13.502 63.152 -7.096 -1.337 0.611 GLN 7 H polymer 1 1 129 ? ? ?
PRD_000306 H61 H61 H 0 1 N N N -39.974 14.548 65.214 -6.312 1.215 -0.572 GLN 7 HA polymer 1 1 130 ? ? ?
PRD_000306 H62 H62 H 0 1 N N N -37.950 15.103 66.538 -7.875 -0.890 -2.131 GLN 7 HB2 polymer 1 1 131 ? ? ?
PRD_000306 H63 H63 H 0 1 N N N -38.271 13.359 66.254 -7.711 0.814 -2.619 GLN 7 HB3 polymer 1 1 132 ? ? ?
PRD_000306 H64 H64 H 0 1 N N N -36.465 13.175 64.765 -5.246 0.558 -2.685 GLN 7 HG2 polymer 1 1 133 ? ? ?
PRD_000306 H65 H65 H 0 1 N N N -36.250 14.957 64.694 -5.410 -1.146 -2.197 GLN 7 HG3 polymer 1 1 134 ? ? ?
PRD_000306 H66 H66 H 0 0 N N N -35.373 14.226 68.511 -4.144 -1.019 -4.573 GLN 7 HE21 polymer 1 1 135 ? ? ?
PRD_000306 H67 H67 H 0 0 N N N -36.969 14.439 67.873 -5.176 -1.291 -5.870 GLN 7 HE22 polymer 1 1 136 ? ? ?
PRD_000306 H68 H68 H 0 1 N N N -40.230 16.581 65.808 -8.649 2.334 -1.313 PHE 8 H polymer 1 1 137 ? ? ?
PRD_000306 H69 H69 H 0 1 N N N -38.592 18.697 64.476 -10.254 2.133 1.118 PHE 8 HA polymer 1 1 138 ? ? ?
PRD_000306 H70 H70 H 0 1 N N N -41.610 18.612 64.859 -10.476 3.911 -1.351 PHE 8 HB2 polymer 1 1 139 ? ? ?
PRD_000306 H71 H71 H 0 1 N N N -40.683 20.111 64.512 -11.522 4.040 0.084 PHE 8 HB3 polymer 1 1 140 ? ? ?
PRD_000306 H72 H72 H 0 1 N N N -41.703 16.823 63.192 -8.130 4.523 -1.238 PHE 8 HD1 polymer 1 1 141 ? ? ?
PRD_000306 H73 H73 H 0 1 N N N -39.891 20.580 62.328 -10.639 4.840 2.196 PHE 8 HD2 polymer 1 1 142 ? ? ?
PRD_000306 H74 H74 H 0 1 N N N -41.928 16.375 60.770 -6.420 5.895 -0.116 PHE 8 HE1 polymer 1 1 143 ? ? ?
PRD_000306 H75 H75 H 0 1 N N N -40.109 20.140 59.911 -8.930 6.213 3.318 PHE 8 HE2 polymer 1 1 144 ? ? ?
PRD_000306 H76 H76 H 0 1 N N N -41.122 18.038 59.127 -6.819 6.736 2.164 PHE 8 HZ polymer 1 1 145 ? ? ?
PRD_000306 H77 H77 H 0 1 N Y N -38.502 18.860 68.046 -13.348 1.096 -0.556 PHE 8 HXT polymer 1 1 146 ? ? ?
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PRD_000306 N1 C1 SING N N 1
PRD_000306 N1 H1 SING N N 2
PRD_000306 N1 H2 SING N N 3
PRD_000306 C1 C2 SING N N 4
PRD_000306 C1 C3 SING N N 5
PRD_000306 C1 H3 SING N N 6
PRD_000306 C2 O1 DOUB N N 7
PRD_000306 C3 C4 SING N N 8
PRD_000306 C3 H4 SING N N 9
PRD_000306 C3 H5 SING N N 10
PRD_000306 C4 C5 SING N N 11
PRD_000306 C4 H6 SING N N 12
PRD_000306 C4 H7 SING N N 13
PRD_000306 C5 C6 SING N N 14
PRD_000306 C5 H8 SING N N 15
PRD_000306 C5 H9 SING N N 16
PRD_000306 C6 N2 SING N N 17
PRD_000306 C6 H10 SING N N 18
PRD_000306 C6 H11 SING N N 19
PRD_000306 N2 H12 SING N N 20
PRD_000306 N2 H13 SING N N 21
PRD_000306 N2 H14 SING N N 22
PRD_000306 N3 C7 SING N N 23
PRD_000306 N3 C11 SING N N 24
PRD_000306 C7 C8 SING N N 25
PRD_000306 C7 C9 SING N N 26
PRD_000306 C7 H15 SING N N 27
PRD_000306 C8 O2 DOUB N N 28
PRD_000306 C9 C10 SING N N 29
PRD_000306 C9 H16 SING N N 30
PRD_000306 C9 H17 SING N N 31
PRD_000306 C10 C11 SING N N 32
PRD_000306 C10 H18 SING N N 33
PRD_000306 C10 H19 SING N N 34
PRD_000306 C11 H20 SING N N 35
PRD_000306 C11 H21 SING N N 36
PRD_000306 N4 C12 SING N N 37
PRD_000306 N4 H22 SING N N 38
PRD_000306 C12 C13 SING N N 39
PRD_000306 C12 C14 SING N N 40
PRD_000306 C12 H23 SING N N 41
PRD_000306 C13 O3 DOUB N N 42
PRD_000306 C14 C15 SING N N 43
PRD_000306 C14 H24 SING N N 44
PRD_000306 C14 H25 SING N N 45
PRD_000306 C15 C16 DOUB Y N 46
PRD_000306 C15 C17 SING Y N 47
PRD_000306 C16 C18 SING Y N 48
PRD_000306 C16 H26 SING N N 49
PRD_000306 C17 C19 DOUB Y N 50
PRD_000306 C17 H27 SING N N 51
PRD_000306 C18 C20 DOUB Y N 52
PRD_000306 C18 H28 SING N N 53
PRD_000306 C19 C20 SING Y N 54
PRD_000306 C19 H29 SING N N 55
PRD_000306 C20 H30 SING N N 56
PRD_000306 N5 C21 SING N N 57
PRD_000306 N5 H31 SING N N 58
PRD_000306 C21 C22 SING N N 59
PRD_000306 C21 C23 SING N N 60
PRD_000306 C21 H32 SING N N 61
PRD_000306 C22 O4 DOUB N N 62
PRD_000306 C23 O5 SING N N 63
PRD_000306 C23 H33 SING N N 64
PRD_000306 C23 H34 SING N N 65
PRD_000306 O5 H35 SING N N 66
PRD_000306 N6 C24 SING N N 67
PRD_000306 N6 H36 SING N N 68
PRD_000306 C24 C25 SING N N 69
PRD_000306 C24 C26 SING N N 70
PRD_000306 C24 H37 SING N N 71
PRD_000306 C25 H38 SING N N 72
PRD_000306 C25 H39 SING N N 73
PRD_000306 C26 C27 SING N N 74
PRD_000306 C26 H40 SING N N 75
PRD_000306 C26 H41 SING N N 76
PRD_000306 C27 C28 SING N N 77
PRD_000306 C27 C29 SING N N 78
PRD_000306 C27 H42 SING N N 79
PRD_000306 C28 H43 SING N N 80
PRD_000306 C28 H44 SING N N 81
PRD_000306 C28 H45 SING N N 82
PRD_000306 C29 H46 SING N N 83
PRD_000306 C29 H47 SING N N 84
PRD_000306 C29 H48 SING N N 85
PRD_000306 N7 C30 SING N N 86
PRD_000306 N7 H49 SING N N 87
PRD_000306 C30 C31 SING N N 88
PRD_000306 C30 C32 SING N N 89
PRD_000306 C30 H50 SING N N 90
PRD_000306 C31 O6 DOUB N N 91
PRD_000306 C32 C33 SING N N 92
PRD_000306 C32 H51 SING N N 93
PRD_000306 C32 H52 SING N N 94
PRD_000306 C33 C34 SING N N 95
PRD_000306 C33 C35 SING N N 96
PRD_000306 C33 H53 SING N N 97
PRD_000306 C34 H54 SING N N 98
PRD_000306 C34 H55 SING N N 99
PRD_000306 C34 H56 SING N N 100
PRD_000306 C35 H57 SING N N 101
PRD_000306 C35 H58 SING N N 102
PRD_000306 C35 H59 SING N N 103
PRD_000306 N8 C36 SING N N 104
PRD_000306 N8 H60 SING N N 105
PRD_000306 C36 C37 SING N N 106
PRD_000306 C36 C38 SING N N 107
PRD_000306 C36 H61 SING N N 108
PRD_000306 C37 O7 DOUB N N 109
PRD_000306 C38 C39 SING N N 110
PRD_000306 C38 H62 SING N N 111
PRD_000306 C38 H63 SING N N 112
PRD_000306 C39 C40 SING N N 113
PRD_000306 C39 H64 SING N N 114
PRD_000306 C39 H65 SING N N 115
PRD_000306 C40 O8 DOUB N N 116
PRD_000306 C40 N9 SING N N 117
PRD_000306 N9 H66 SING N N 118
PRD_000306 N9 H67 SING N N 119
PRD_000306 N10 C41 SING N N 120
PRD_000306 N10 H68 SING N N 121
PRD_000306 C41 C42 SING N N 122
PRD_000306 C41 C43 SING N N 123
PRD_000306 C41 H69 SING N N 124
PRD_000306 C42 O9 DOUB N N 125
PRD_000306 C42 O10 SING N N 126
PRD_000306 C43 C44 SING N N 127
PRD_000306 C43 H70 SING N N 128
PRD_000306 C43 H71 SING N N 129
PRD_000306 C44 C45 DOUB Y N 130
PRD_000306 C44 C46 SING Y N 131
PRD_000306 C45 C47 SING Y N 132
PRD_000306 C45 H72 SING N N 133
PRD_000306 C46 C48 DOUB Y N 134
PRD_000306 C46 H73 SING N N 135
PRD_000306 C47 C49 DOUB Y N 136
PRD_000306 C47 H74 SING N N 137
PRD_000306 C48 C49 SING Y N 138
PRD_000306 C48 H75 SING N N 139
PRD_000306 C49 H76 SING N N 140
PRD_000306 O10 H77 SING N N 141
PRD_000306 C22 N6 SING N N 142
PRD_000306 C25 N7 SING N N 143
PRD_000306 C2 N3 SING N N 144
PRD_000306 C8 N4 SING N N 145
PRD_000306 C13 N5 SING N N 146
PRD_000306 C31 N8 SING N N 147
PRD_000306 C37 N10 SING N N 148
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PRD_000306 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NC(CC(C)C)CNC(C(=O)NC(C(=O)NC(C(=O)O)Cc1ccccc1)CCC(=O)N)CC(C)C)CO)Cc2ccccc2)C3N(C(=O)C(N)CCCC[NH3+])CCC3"
PRD_000306 InChI InChI 1.03 "InChI=1S/C49H76N10O10/c1-30(2)24-34(28-53-37(25-31(3)4)44(63)55-36(20-21-42(52)61)43(62)57-39(49(68)69)27-33-16-9-6-10-17-33)54-46(65)40(29-60)58-45(64)38(26-32-14-7-5-8-15-32)56-47(66)41-19-13-23-59(41)48(67)35(51)18-11-12-22-50/h5-10,14-17,30-31,34-41,53,60H,11-13,18-29,50-51H2,1-4H3,(H2,52,61)(H,54,65)(H,55,63)(H,56,66)(H,57,62)(H,58,64)(H,68,69)/p+1"
PRD_000306 InChIKey InChI 1.03 BUPNOZSDCJWABK-UHFFFAOYSA-O
PRD_000306 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@@H](CN[C@@H](CC(C)C)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1ccccc1)C(O)=O)NC(=O)[C@H](CO)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]3CCCN3C(=O)[C@@H](N)CCCC[NH3+]"
PRD_000306 SMILES CACTVS 3.370 "CC(C)C[CH](CN[CH](CC(C)C)C(=O)N[CH](CCC(N)=O)C(=O)N[CH](Cc1ccccc1)C(O)=O)NC(=O)[CH](CO)NC(=O)[CH](Cc2ccccc2)NC(=O)[CH]3CCCN3C(=O)[CH](N)CCCC[NH3+]"
PRD_000306 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](CN[C@@H](CC(C)C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](Cc1ccccc1)C(=O)O)NC(=O)[C@H](CO)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]3CCCN3C(=O)[C@H](CCCC[NH3+])N"
PRD_000306 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(CNC(CC(C)C)C(=O)NC(CCC(=O)N)C(=O)NC(Cc1ccccc1)C(=O)O)NC(=O)C(CO)NC(=O)C(Cc2ccccc2)NC(=O)C3CCCN3C(=O)C(CCCC[NH3+])N"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PRD_000306 "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-5-amino-6-[(2R)-2-{[(2S,5R,8S,11R,14S,17R)-5-(3-amino-3-oxopropyl)-2-carboxy-14-(hydroxymethyl)-8,11-bis(2-methylpropyl)-4,7,13,16-tetraoxo-1,18-diphenyl-3,6,9,12,15-pentaazaoctadecan-17-yl]carbamoyl}pyrrolidin-1-yl]-6-oxohexan-1-aminium (non-preferred name)"
PRD_000306 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(5S)-5-azanyl-6-[(2S)-2-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-azanyl-1,5-bis(oxidanylidene)-1-[[(2S)-1-oxidanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]pentan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-4-methyl-pentan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-3-phenyl-propan-2-yl]carbamoyl]pyrrolidin-1-yl]-6-oxidanylidene-hexyl]azanium"
#