data_PRDCC_000317 # _chem_comp.id PRD_000317 _chem_comp.name "N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-prolinamide" _chem_comp.formula "C21 H37 B N4 O8" _chem_comp.formula_weight 484.351 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000317 C1 C1 C 0 1 N N N ? ? ? 5.963 -0.693 0.127 MSU 1 C1 polymer 1 1 1 ? ? ? PRD_000317 O1 O1 O 0 1 N N N ? ? ? 5.838 -1.886 -0.051 MSU 1 O1 polymer 1 1 2 ? ? ? PRD_000317 C2 C2 C 0 1 N N N ? ? ? 7.334 -0.068 0.108 MSU 1 C2 polymer 1 1 3 ? ? ? PRD_000317 C3 C3 C 0 1 N N N ? ? ? 8.384 -1.149 -0.152 MSU 1 C3 polymer 1 1 4 ? ? ? PRD_000317 C4 C4 C 0 1 N N N ? ? ? 9.755 -0.525 -0.171 MSU 1 C4 polymer 1 1 5 ? ? ? PRD_000317 O2 O2 O 0 1 N N N ? ? ? 9.880 0.664 0.006 MSU 1 OT1 polymer 1 1 6 ? ? ? PRD_000317 O3 O3 O 0 1 N N N ? ? ? 10.838 -1.288 -0.384 MSU 1 OT2 polymer 1 1 7 ? ? ? PRD_000317 C5 C5 C 0 1 N N N ? ? ? 12.127 -0.619 -0.389 MSU 1 CT polymer 1 1 8 ? ? ? PRD_000317 N1 N1 N 0 1 N N N 14.221 41.793 18.292 4.875 0.075 0.336 ALA 2 N polymer 1 1 9 ? ? ? PRD_000317 C6 C6 C 0 1 N N S 14.757 40.615 17.676 3.542 -0.531 0.348 ALA 2 CA polymer 1 1 10 ? ? ? PRD_000317 C7 C7 C 0 1 N N N 13.902 39.454 18.164 2.513 0.509 -0.015 ALA 2 C polymer 1 1 11 ? ? ? PRD_000317 O4 O4 O 0 1 N N N 13.457 39.489 19.315 2.860 1.645 -0.260 ALA 2 O polymer 1 1 12 ? ? ? PRD_000317 C8 C8 C 0 1 N N N 16.214 40.369 18.102 3.243 -1.078 1.745 ALA 2 CB polymer 1 1 13 ? ? ? PRD_000317 N2 N2 N 0 1 N N N 13.637 38.461 17.335 1.208 0.176 -0.068 ALA 3 N polymer 1 1 14 ? ? ? PRD_000317 C9 C9 C 0 1 N N S 12.801 37.331 17.714 0.208 1.187 -0.421 ALA 3 CA polymer 1 1 15 ? ? ? PRD_000317 C10 C10 C 0 1 N N N 13.610 36.090 17.381 -1.127 0.798 0.159 ALA 3 C polymer 1 1 16 ? ? ? PRD_000317 O5 O5 O 0 1 N N N 14.498 36.218 16.528 -1.377 -0.370 0.373 ALA 3 O polymer 1 1 17 ? ? ? PRD_000317 C11 C11 C 0 1 N N N 11.546 37.287 16.873 0.095 1.283 -1.944 ALA 3 CB polymer 1 1 18 ? ? ? PRD_000317 N3 N3 N 0 1 N N N 13.404 34.933 18.039 -2.043 1.746 0.439 PRO 4 N polymer 1 1 19 ? ? ? PRD_000317 C12 C12 C 0 1 N N S 14.118 33.696 17.737 -3.335 1.520 1.103 PRO 4 CA polymer 1 1 20 ? ? ? PRD_000317 C13 C13 C 0 1 N N N 13.831 33.303 16.285 -4.163 0.553 0.296 PRO 4 C polymer 1 1 21 ? ? ? PRD_000317 O6 O6 O 0 1 N N N 12.720 33.552 15.790 -3.724 0.093 -0.737 PRO 4 O polymer 1 1 22 ? ? ? PRD_000317 C14 C14 C 0 1 N N N 13.573 32.672 18.704 -4.052 2.883 1.186 PRO 4 CB polymer 1 1 23 ? ? ? PRD_000317 C15 C15 C 0 1 N N N 12.806 33.445 19.745 -3.371 3.704 0.059 PRO 4 CG polymer 1 1 24 ? ? ? PRD_000317 C16 C16 C 0 1 N N N 12.291 34.628 18.939 -1.912 3.183 0.137 PRO 4 CD polymer 1 1 25 ? ? ? PRD_000317 C17 C17 C 0 1 N N R 14.552 32.160 14.277 -6.198 -0.738 -0.063 BLE 5 CA polymer 1 1 26 ? ? ? PRD_000317 C18 C18 C 0 1 N N N 15.411 33.015 13.339 -6.826 -1.775 0.870 BLE 5 CB polymer 1 1 27 ? ? ? PRD_000317 C19 C19 C 0 1 N N N 15.441 34.532 13.302 -7.746 -2.695 0.065 BLE 5 CG polymer 1 1 28 ? ? ? PRD_000317 C20 C20 C 0 1 N N N 16.440 35.005 12.276 -6.912 -3.513 -0.923 BLE 5 CD1 polymer 1 1 29 ? ? ? PRD_000317 C21 C21 C 0 1 N N N 14.107 35.057 12.899 -8.481 -3.641 1.017 BLE 5 CD2 polymer 1 1 30 ? ? ? PRD_000317 N4 N4 N 0 1 N N N 14.793 32.686 15.604 -5.393 0.201 0.721 BLE 5 N polymer 1 1 31 ? ? ? PRD_000317 B1 B1 B 0 1 N N N 14.873 30.609 14.316 -7.333 0.045 -0.814 BLE 5 B polymer 1 1 32 ? ? ? PRD_000317 O7 O7 O 0 1 N N N 14.884 30.152 12.937 -8.229 0.869 -0.083 BLE 5 O1 polymer 1 1 33 ? ? ? PRD_000317 O8 O8 O 0 1 N N N 13.646 30.131 14.829 -7.463 -0.071 -2.223 BLE 5 O2 polymer 1 1 34 ? ? ? PRD_000317 H1 H1 H 0 1 N N N ? ? ? 7.381 0.682 -0.681 MSU 1 H21 polymer 1 1 35 ? ? ? PRD_000317 H2 H2 H 0 1 N N N ? ? ? 7.531 0.405 1.071 MSU 1 H22 polymer 1 1 36 ? ? ? PRD_000317 H3 H3 H 0 1 N N N ? ? ? 8.337 -1.899 0.637 MSU 1 H31 polymer 1 1 37 ? ? ? PRD_000317 H4 H4 H 0 1 N N N ? ? ? 8.187 -1.622 -1.115 MSU 1 H32 polymer 1 1 38 ? ? ? PRD_000317 H5 H5 H 0 1 N N N ? ? ? 12.915 -1.349 -0.572 MSU 1 HT1 polymer 1 1 39 ? ? ? PRD_000317 H6 H6 H 0 1 N N N ? ? ? 12.141 0.136 -1.175 MSU 1 HT2 polymer 1 1 40 ? ? ? PRD_000317 H7 H7 H 0 1 N N N ? ? ? 12.291 -0.141 0.577 MSU 1 HT3 polymer 1 1 41 ? ? ? PRD_000317 H8 H8 H 0 1 N N N 14.180 42.694 18.724 4.975 1.030 0.478 ALA 2 H polymer 1 1 42 ? ? ? PRD_000317 H9 H9 H 0 1 N N N 14.701 40.683 16.580 3.506 -1.345 -0.376 ALA 2 HA polymer 1 1 43 ? ? ? PRD_000317 H10 H10 H 0 1 N N N 16.591 39.460 17.611 3.278 -0.264 2.469 ALA 2 HB1 polymer 1 1 44 ? ? ? PRD_000317 H11 H11 H 0 1 N N N 16.833 41.229 17.806 2.250 -1.530 1.754 ALA 2 HB2 polymer 1 1 45 ? ? ? PRD_000317 H12 H12 H 0 1 N N N 16.260 40.243 19.194 3.986 -1.831 2.007 ALA 2 HB3 polymer 1 1 46 ? ? ? PRD_000317 H13 H13 H 0 1 N N N 14.025 38.486 16.413 0.931 -0.732 0.128 ALA 3 H polymer 1 1 47 ? ? ? PRD_000317 H14 H14 H 0 1 N N N 12.551 37.355 18.785 0.511 2.154 -0.018 ALA 3 HA polymer 1 1 48 ? ? ? PRD_000317 H15 H15 H 0 1 N N N 10.931 36.427 17.176 -0.583 2.094 -2.207 ALA 3 HB1 polymer 1 1 49 ? ? ? PRD_000317 H16 H16 H 0 1 N N N 10.975 38.216 17.018 1.079 1.478 -2.370 ALA 3 HB2 polymer 1 1 50 ? ? ? PRD_000317 H17 H17 H 0 1 N N N 11.819 37.187 15.812 -0.292 0.343 -2.339 ALA 3 HB3 polymer 1 1 51 ? ? ? PRD_000317 H18 H18 H 0 1 N N N 15.201 33.820 17.885 -3.173 1.122 2.105 PRO 4 HA polymer 1 1 52 ? ? ? PRD_000317 H19 H19 H 0 1 N N N 12.906 31.971 18.181 -5.119 2.771 0.990 PRO 4 HB2 polymer 1 1 53 ? ? ? PRD_000317 H20 H20 H 0 1 N N N 14.397 32.114 19.173 -3.884 3.349 2.157 PRO 4 HB3 polymer 1 1 54 ? ? ? PRD_000317 H21 H21 H 0 1 N N N 11.977 32.850 20.156 -3.817 3.482 -0.910 PRO 4 HG2 polymer 1 1 55 ? ? ? PRD_000317 H22 H22 H 0 1 N N N 13.463 33.774 20.564 -3.414 4.772 0.273 PRO 4 HG3 polymer 1 1 56 ? ? ? PRD_000317 H23 H23 H 0 1 N N N 12.068 35.483 19.594 -1.367 3.690 0.933 PRO 4 HD2 polymer 1 1 57 ? ? ? PRD_000317 H24 H24 H 0 1 N N N 11.389 34.355 18.372 -1.407 3.325 -0.819 PRO 4 HD3 polymer 1 1 58 ? ? ? PRD_000317 H25 H25 H 0 1 N N N 13.493 32.287 14.007 -5.562 -1.242 -0.791 BLE 5 HA polymer 1 1 59 ? ? ? PRD_000317 H26 H26 H 0 1 N N N 16.449 32.709 13.537 -6.038 -2.367 1.337 BLE 5 HB2 polymer 1 1 60 ? ? ? PRD_000317 H27 H27 H 0 1 N N N 15.126 32.706 12.323 -7.404 -1.267 1.641 BLE 5 HB3 polymer 1 1 61 ? ? ? PRD_000317 H28 H28 H 0 1 N N N 15.715 34.920 14.294 -8.472 -2.094 -0.482 BLE 5 HG polymer 1 1 62 ? ? ? PRD_000317 H29 H29 H 0 0 N N N 16.454 36.105 12.257 -7.567 -4.169 -1.496 BLE 5 HD11 polymer 1 1 63 ? ? ? PRD_000317 H30 H30 H 0 0 N N N 17.440 34.630 12.538 -6.388 -2.840 -1.601 BLE 5 HD12 polymer 1 1 64 ? ? ? PRD_000317 H31 H31 H 0 0 N N N 16.155 34.625 11.284 -6.186 -4.115 -0.375 BLE 5 HD13 polymer 1 1 65 ? ? ? PRD_000317 H32 H32 H 0 0 N N N 14.137 36.156 12.875 -9.075 -3.058 1.721 BLE 5 HD21 polymer 1 1 66 ? ? ? PRD_000317 H33 H33 H 0 0 N N N 13.849 34.675 11.900 -9.137 -4.296 0.444 BLE 5 HD22 polymer 1 1 67 ? ? ? PRD_000317 H34 H34 H 0 0 N N N 13.349 34.727 13.624 -7.755 -4.242 1.565 BLE 5 HD23 polymer 1 1 68 ? ? ? PRD_000317 H35 H35 H 0 1 N N N 15.698 32.584 16.016 -5.744 0.569 1.547 BLE 5 H polymer 1 1 69 ? ? ? PRD_000317 H36 H36 H 0 1 N N N 15.074 29.221 12.913 -8.062 0.885 0.869 BLE 5 HO1 polymer 1 1 70 ? ? ? PRD_000317 H37 H37 H 0 1 N N N 13.684 29.185 14.912 -6.859 -0.711 -2.623 BLE 5 HO2 polymer 1 1 71 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000317 C1 O1 DOUB N N 1 PRD_000317 C1 C2 SING N N 2 PRD_000317 C2 C3 SING N N 3 PRD_000317 C2 H1 SING N N 4 PRD_000317 C2 H2 SING N N 5 PRD_000317 C3 C4 SING N N 6 PRD_000317 C3 H3 SING N N 7 PRD_000317 C3 H4 SING N N 8 PRD_000317 C4 O2 DOUB N N 9 PRD_000317 C4 O3 SING N N 10 PRD_000317 O3 C5 SING N N 11 PRD_000317 C5 H5 SING N N 12 PRD_000317 C5 H6 SING N N 13 PRD_000317 C5 H7 SING N N 14 PRD_000317 N1 C6 SING N N 15 PRD_000317 N1 H8 SING N N 16 PRD_000317 C6 C7 SING N N 17 PRD_000317 C6 C8 SING N N 18 PRD_000317 C6 H9 SING N N 19 PRD_000317 C7 O4 DOUB N N 20 PRD_000317 C8 H10 SING N N 21 PRD_000317 C8 H11 SING N N 22 PRD_000317 C8 H12 SING N N 23 PRD_000317 N2 C9 SING N N 24 PRD_000317 N2 H13 SING N N 25 PRD_000317 C9 C10 SING N N 26 PRD_000317 C9 C11 SING N N 27 PRD_000317 C9 H14 SING N N 28 PRD_000317 C10 O5 DOUB N N 29 PRD_000317 C11 H15 SING N N 30 PRD_000317 C11 H16 SING N N 31 PRD_000317 C11 H17 SING N N 32 PRD_000317 N3 C12 SING N N 33 PRD_000317 N3 C16 SING N N 34 PRD_000317 C12 C13 SING N N 35 PRD_000317 C12 C14 SING N N 36 PRD_000317 C12 H18 SING N N 37 PRD_000317 C13 O6 DOUB N N 38 PRD_000317 C14 C15 SING N N 39 PRD_000317 C14 H19 SING N N 40 PRD_000317 C14 H20 SING N N 41 PRD_000317 C15 C16 SING N N 42 PRD_000317 C15 H21 SING N N 43 PRD_000317 C15 H22 SING N N 44 PRD_000317 C16 H23 SING N N 45 PRD_000317 C16 H24 SING N N 46 PRD_000317 C17 C18 SING N N 47 PRD_000317 C17 N4 SING N N 48 PRD_000317 C17 B1 SING N N 49 PRD_000317 C17 H25 SING N N 50 PRD_000317 C18 C19 SING N N 51 PRD_000317 C18 H26 SING N N 52 PRD_000317 C18 H27 SING N N 53 PRD_000317 C19 C20 SING N N 54 PRD_000317 C19 C21 SING N N 55 PRD_000317 C19 H28 SING N N 56 PRD_000317 C20 H29 SING N N 57 PRD_000317 C20 H30 SING N N 58 PRD_000317 C20 H31 SING N N 59 PRD_000317 C21 H32 SING N N 60 PRD_000317 C21 H33 SING N N 61 PRD_000317 C21 H34 SING N N 62 PRD_000317 N4 H35 SING N N 63 PRD_000317 B1 O7 SING N N 64 PRD_000317 B1 O8 SING N N 65 PRD_000317 O7 H36 SING N N 66 PRD_000317 O8 H37 SING N N 67 PRD_000317 C1 N1 SING N N 68 PRD_000317 C13 N4 SING N N 69 PRD_000317 C7 N2 SING N N 70 PRD_000317 C10 N3 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000317 SMILES ACDLabs 12.01 "O=C(NC(B(O)O)CC(C)C)C1N(C(=O)C(NC(=O)C(NC(=O)CCC(=O)OC)C)C)CCC1" PRD_000317 InChI InChI 1.03 "InChI=1S/C21H37BN4O8/c1-12(2)11-16(22(32)33)25-20(30)15-7-6-10-26(15)21(31)14(4)24-19(29)13(3)23-17(27)8-9-18(28)34-5/h12-16,32-33H,6-11H2,1-5H3,(H,23,27)(H,24,29)(H,25,30)/t13-,14?,15?,16-/m0/s1" PRD_000317 InChIKey InChI 1.03 YXINIRXWSQSJSI-LBDPXKHJSA-N PRD_000317 SMILES_CANONICAL CACTVS 3.370 "COC(=O)CCC(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CC(C)C)B(O)O" PRD_000317 SMILES CACTVS 3.370 "COC(=O)CCC(=O)N[CH](C)C(=O)N[CH](C)C(=O)N1CCC[CH]1C(=O)N[CH](CC(C)C)B(O)O" PRD_000317 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "B([C@H](CC(C)C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(=O)[C@H](C)NC(=O)CCC(=O)OC)(O)O" PRD_000317 SMILES "OpenEye OEToolkits" 1.7.6 "B(C(CC(C)C)NC(=O)C1CCCN1C(=O)C(C)NC(=O)C(C)NC(=O)CCC(=O)OC)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000317 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(4-methoxy-4-oxobutanoyl)-L-alanyl-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-3-methylbutyl]-L-prolinamide" PRD_000317 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(1R)-1-[[(2S)-1-[(2S)-2-[[(2S)-2-[(4-methoxy-4-oxidanylidene-butanoyl)amino]propanoyl]amino]propanoyl]pyrrolidin-2-yl]carbonylamino]-3-methyl-butyl]boronic acid" #