data_PRDCC_000334 # _chem_comp.id PRD_000334 _chem_comp.name "BENZYLOXYCARBONYL-GLYCYL-PHENYLALANYL-METHYLENYLGLYCYL DERIVATIVE" _chem_comp.formula "C22 H24 Cl N3 O5" _chem_comp.formula_weight 445.896 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000334 C1 C1 C 0 1 N N N 5.361 28.086 15.339 3.809 -1.274 -0.639 PHQ 1 C1 polymer 1 1 1 ? ? ? PRD_000334 O1 O1 O 0 1 N N N 6.244 27.217 15.096 3.878 -2.138 -1.490 PHQ 1 O1 polymer 1 1 2 ? ? ? PRD_000334 O2 O2 O 0 1 N N N 4.106 28.146 14.699 4.931 -0.816 -0.052 PHQ 1 O2 polymer 1 1 3 ? ? ? PRD_000334 C2 C2 C 0 1 N N N 3.250 27.375 15.521 6.187 -1.400 -0.486 PHQ 1 C2 polymer 1 1 4 ? ? ? PRD_000334 C3 C3 C 0 1 Y N N 1.860 27.998 15.523 7.324 -0.769 0.276 PHQ 1 C3 polymer 1 1 5 ? ? ? PRD_000334 C4 C4 C 0 1 Y N N 1.364 28.788 14.464 7.747 -1.321 1.471 PHQ 1 C4 polymer 1 1 6 ? ? ? PRD_000334 C5 C5 C 0 1 Y N N 0.076 29.413 14.665 8.790 -0.741 2.169 PHQ 1 C5 polymer 1 1 7 ? ? ? PRD_000334 C6 C6 C 0 1 Y N N -0.615 29.345 15.823 9.410 0.389 1.673 PHQ 1 C6 polymer 1 1 8 ? ? ? PRD_000334 C7 C7 C 0 1 Y N N -0.068 28.555 16.932 8.989 0.941 0.477 PHQ 1 C7 polymer 1 1 9 ? ? ? PRD_000334 C8 C8 C 0 1 Y N N 1.171 27.980 16.730 7.949 0.359 -0.223 PHQ 1 C8 polymer 1 1 10 ? ? ? PRD_000334 N1 N1 N 0 1 N N N 5.484 28.853 16.425 2.610 -0.770 -0.286 GLY 2 N polymer 1 1 11 ? ? ? PRD_000334 C9 C9 C 0 1 N N N 6.690 28.798 17.265 1.390 -1.263 -0.929 GLY 2 CA polymer 1 1 12 ? ? ? PRD_000334 C10 C10 C 0 1 N N N 7.993 29.314 16.594 0.195 -0.543 -0.360 GLY 2 C polymer 1 1 13 ? ? ? PRD_000334 O3 O3 O 0 1 N N N 8.041 29.843 15.384 0.348 0.301 0.499 GLY 2 O polymer 1 1 14 ? ? ? PRD_000334 N2 N2 N 0 1 N N N 9.149 29.257 17.284 -1.043 -0.835 -0.804 PHE 3 N polymer 1 1 15 ? ? ? PRD_000334 C11 C11 C 0 1 N N S 10.506 29.781 17.063 -2.205 -0.134 -0.251 PHE 3 CA polymer 1 1 16 ? ? ? PRD_000334 C12 C12 C 0 1 N N N 11.230 28.703 16.174 -3.432 -0.994 -0.409 PHE 3 C polymer 1 1 17 ? ? ? PRD_000334 O4 O4 O 0 1 N N N 11.014 27.514 16.647 -3.345 -2.085 -0.932 PHE 3 O polymer 1 1 18 ? ? ? PRD_000334 C13 C13 C 0 1 N N N 11.122 30.043 18.403 -2.407 1.186 -0.998 PHE 3 CB polymer 1 1 19 ? ? ? PRD_000334 C14 C14 C 0 1 Y N N 10.499 31.266 19.088 -1.233 2.094 -0.739 PHE 3 CG polymer 1 1 20 ? ? ? PRD_000334 C15 C15 C 0 1 Y N N 10.816 32.551 18.513 -0.133 2.057 -1.576 PHE 3 CD1 polymer 1 1 21 ? ? ? PRD_000334 C16 C16 C 0 1 Y N N 9.455 31.149 20.000 -1.259 2.969 0.331 PHE 3 CD2 polymer 1 1 22 ? ? ? PRD_000334 C17 C17 C 0 1 Y N N 10.190 33.672 19.100 0.944 2.891 -1.338 PHE 3 CE1 polymer 1 1 23 ? ? ? PRD_000334 C18 C18 C 0 1 Y N N 8.829 32.269 20.537 -0.182 3.802 0.568 PHE 3 CE2 polymer 1 1 24 ? ? ? PRD_000334 C19 C19 C 0 1 Y N N 9.147 33.606 20.061 0.921 3.761 -0.265 PHE 3 CZ polymer 1 1 25 ? ? ? PRD_000334 N3 N3 N 0 1 N N N 11.924 28.971 15.013 -4.627 -0.551 0.032 GLY 4 N polymer 1 1 26 ? ? ? PRD_000334 C20 C20 C 0 1 N N N 12.600 27.947 14.274 -5.820 -1.387 -0.122 GLY 4 CA polymer 1 1 27 ? ? ? PRD_000334 C21 C21 C 0 1 N N N 14.104 28.026 14.509 -7.015 -0.666 0.447 GLY 4 C polymer 1 1 28 ? ? ? PRD_000334 O5 O5 O 0 1 N N N 14.733 27.007 14.020 -6.883 0.432 0.931 GLY 4 O polymer 1 1 29 ? ? ? PRD_000334 C22 C22 C 0 1 N N N 14.927 28.975 15.235 -8.374 -1.316 0.413 0QE 5 C1 polymer 1 1 30 ? ? ? PRD_000334 CL1 CL1 CL 0 0 N Y N ? ? ? -9.587 -0.213 1.163 0QE 5 CL1 polymer 1 1 31 ? ? ? PRD_000334 H1 H1 H 0 1 N N N 3.192 26.348 15.131 6.174 -2.473 -0.295 PHQ 1 H21 polymer 1 1 32 ? ? ? PRD_000334 H2 H2 H 0 1 N N N 3.645 27.355 16.547 6.322 -1.222 -1.553 PHQ 1 H22 polymer 1 1 33 ? ? ? PRD_000334 H3 H3 H 0 1 N N N 1.920 28.919 13.547 7.262 -2.204 1.859 PHQ 1 H41 polymer 1 1 34 ? ? ? PRD_000334 H4 H4 H 0 1 N N N -0.357 29.965 13.844 9.119 -1.172 3.103 PHQ 1 H51 polymer 1 1 35 ? ? ? PRD_000334 H5 H5 H 0 1 N N N -1.556 29.864 15.931 10.225 0.842 2.219 PHQ 1 H61 polymer 1 1 36 ? ? ? PRD_000334 H6 H6 H 0 1 N N N -0.607 28.430 17.859 9.474 1.824 0.089 PHQ 1 H71 polymer 1 1 37 ? ? ? PRD_000334 H7 H7 H 0 1 N N N 1.637 27.482 17.568 7.622 0.788 -1.159 PHQ 1 H81 polymer 1 1 38 ? ? ? PRD_000334 H8 H8 H 0 1 N N N 4.742 29.477 16.672 2.555 -0.080 0.394 GLY 2 H polymer 1 1 39 ? ? ? PRD_000334 H9 H9 H 0 1 N N N 6.506 29.407 18.163 1.446 -1.082 -2.002 GLY 2 HA2 polymer 1 1 40 ? ? ? PRD_000334 H10 H10 H 0 1 N N N 6.851 27.750 17.559 1.290 -2.333 -0.746 GLY 2 HA3 polymer 1 1 41 ? ? ? PRD_000334 H11 H11 H 0 1 N N N 9.066 28.743 18.138 -1.165 -1.510 -1.491 PHE 3 H polymer 1 1 42 ? ? ? PRD_000334 H12 H12 H 0 1 N N N 10.453 30.722 16.495 -2.037 0.068 0.807 PHE 3 HA polymer 1 1 43 ? ? ? PRD_000334 H13 H13 H 0 1 N N N 10.971 29.161 19.043 -2.487 0.990 -2.067 PHE 3 HB2 polymer 1 1 44 ? ? ? PRD_000334 H14 H14 H 0 1 N N N 12.200 30.220 18.271 -3.322 1.665 -0.647 PHE 3 HB3 polymer 1 1 45 ? ? ? PRD_000334 H15 H15 H 0 1 N N N 11.495 32.650 17.679 -0.115 1.377 -2.414 PHE 3 HD1 polymer 1 1 46 ? ? ? PRD_000334 H16 H16 H 0 1 N N N 9.123 30.166 20.298 -2.120 3.001 0.982 PHE 3 HD2 polymer 1 1 47 ? ? ? PRD_000334 H17 H17 H 0 1 N N N 10.529 34.651 18.796 1.804 2.861 -1.991 PHE 3 HE1 polymer 1 1 48 ? ? ? PRD_000334 H18 H18 H 0 1 N N N 8.095 32.144 21.320 -0.201 4.486 1.404 PHE 3 HE2 polymer 1 1 49 ? ? ? PRD_000334 H19 H19 H 0 1 N N N 8.627 34.485 20.413 1.762 4.412 -0.080 PHE 3 HZ polymer 1 1 50 ? ? ? PRD_000334 H20 H20 H 0 1 N N N 11.956 29.912 14.676 -4.696 0.321 0.450 GLY 4 H polymer 1 1 51 ? ? ? PRD_000334 H21 H21 H 0 1 N N N 12.233 26.963 14.601 -5.988 -1.590 -1.180 GLY 4 HA2 polymer 1 1 52 ? ? ? PRD_000334 H22 H22 H 0 1 N N N 12.394 28.078 13.202 -5.675 -2.328 0.410 GLY 4 HA3 polymer 1 1 53 ? ? ? PRD_000334 H23 H23 H 0 1 N N N 14.741 29.312 16.265 -8.655 -1.516 -0.621 0QE 5 HA polymer 1 1 54 ? ? ? PRD_000334 H24 H24 H 0 1 N N N 15.740 29.571 14.795 -8.342 -2.254 0.968 0QE 5 HB polymer 1 1 55 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000334 C1 O1 DOUB N N 1 PRD_000334 C1 O2 SING N N 2 PRD_000334 O2 C2 SING N N 3 PRD_000334 C2 C3 SING N N 4 PRD_000334 C2 H1 SING N N 5 PRD_000334 C2 H2 SING N N 6 PRD_000334 C3 C4 DOUB Y N 7 PRD_000334 C3 C8 SING Y N 8 PRD_000334 C4 C5 SING Y N 9 PRD_000334 C4 H3 SING N N 10 PRD_000334 C5 C6 DOUB Y N 11 PRD_000334 C5 H4 SING N N 12 PRD_000334 C6 C7 SING Y N 13 PRD_000334 C6 H5 SING N N 14 PRD_000334 C7 C8 DOUB Y N 15 PRD_000334 C7 H6 SING N N 16 PRD_000334 C8 H7 SING N N 17 PRD_000334 N1 C9 SING N N 18 PRD_000334 N1 H8 SING N N 19 PRD_000334 C9 C10 SING N N 20 PRD_000334 C9 H9 SING N N 21 PRD_000334 C9 H10 SING N N 22 PRD_000334 C10 O3 DOUB N N 23 PRD_000334 N2 C11 SING N N 24 PRD_000334 N2 H11 SING N N 25 PRD_000334 C11 C12 SING N N 26 PRD_000334 C11 C13 SING N N 27 PRD_000334 C11 H12 SING N N 28 PRD_000334 C12 O4 DOUB N N 29 PRD_000334 C13 C14 SING N N 30 PRD_000334 C13 H13 SING N N 31 PRD_000334 C13 H14 SING N N 32 PRD_000334 C14 C15 DOUB Y N 33 PRD_000334 C14 C16 SING Y N 34 PRD_000334 C15 C17 SING Y N 35 PRD_000334 C15 H15 SING N N 36 PRD_000334 C16 C18 DOUB Y N 37 PRD_000334 C16 H16 SING N N 38 PRD_000334 C17 C19 DOUB Y N 39 PRD_000334 C17 H17 SING N N 40 PRD_000334 C18 C19 SING Y N 41 PRD_000334 C18 H18 SING N N 42 PRD_000334 C19 H19 SING N N 43 PRD_000334 N3 C20 SING N N 44 PRD_000334 N3 H20 SING N N 45 PRD_000334 C20 C21 SING N N 46 PRD_000334 C20 H21 SING N N 47 PRD_000334 C20 H22 SING N N 48 PRD_000334 C21 O5 DOUB N N 49 PRD_000334 C22 CL1 SING N N 50 PRD_000334 C22 H23 SING N N 51 PRD_000334 C22 H24 SING N N 52 PRD_000334 C1 N1 SING N N 53 PRD_000334 C21 C22 SING N N 54 PRD_000334 C10 N2 SING N N 55 PRD_000334 C12 N3 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000334 SMILES ACDLabs 12.01 "ClCC(=O)CNC(=O)C(NC(=O)CNC(=O)OCc1ccccc1)Cc2ccccc2" PRD_000334 InChI InChI 1.03 "InChI=1S/C22H24ClN3O5/c23-12-18(27)13-24-21(29)19(11-16-7-3-1-4-8-16)26-20(28)14-25-22(30)31-15-17-9-5-2-6-10-17/h1-10,19H,11-15H2,(H,24,29)(H,25,30)(H,26,28)" PRD_000334 InChIKey InChI 1.03 HXVSUVCIQJYIIX-UHFFFAOYSA-N PRD_000334 SMILES_CANONICAL CACTVS 3.370 "ClCC(=O)CNC(=O)[C@H](Cc1ccccc1)NC(=O)CNC(=O)OCc2ccccc2" PRD_000334 SMILES CACTVS 3.370 "ClCC(=O)CNC(=O)[CH](Cc1ccccc1)NC(=O)CNC(=O)OCc2ccccc2" PRD_000334 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@@H](C(=O)NCC(=O)CCl)NC(=O)CNC(=O)OCc2ccccc2" PRD_000334 SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(C(=O)NCC(=O)CCl)NC(=O)CNC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000334 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]glycyl-N-(3-chloro-2-oxopropyl)-L-phenylalaninamide" PRD_000334 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(phenylmethyl) N-[2-[[(2S)-1-[(3-chloranyl-2-oxidanylidene-propyl)amino]-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-2-oxidanylidene-ethyl]carbamate" #