data_PRDCC_000400 # _chem_comp.id PRD_000400 _chem_comp.name SUCCINYL-ALA-PRO-ALA-P-NITROANILIDE _chem_comp.formula "C21 H27 N5 O8" _chem_comp.formula_weight 477.468 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000400 C1 C1 C 0 1 N N N 8.056 33.205 18.539 9.994 -1.609 0.548 SIN 1 C1 polymer 1 1 1 ? ? ? PRD_000400 O1 O1 O 0 1 N N N 8.804 32.258 18.216 9.578 -2.727 0.744 SIN 1 O1 polymer 1 1 2 ? ? ? PRD_000400 O2 O2 O 0 1 N Y N 7.996 33.576 19.732 11.311 -1.360 0.627 SIN 1 O2 polymer 1 1 3 ? ? ? PRD_000400 C2 C2 C 0 1 N N N 7.224 33.896 17.479 9.035 -0.498 0.208 SIN 1 C2 polymer 1 1 4 ? ? ? PRD_000400 C3 C3 C 0 1 N N N 7.837 35.184 16.945 7.608 -1.048 0.176 SIN 1 C3 polymer 1 1 5 ? ? ? PRD_000400 C4 C4 C 0 1 N N N 6.967 35.839 15.922 6.649 0.064 -0.164 SIN 1 C4 polymer 1 1 6 ? ? ? PRD_000400 O3 O3 O 0 1 N N N 5.740 35.883 16.015 7.066 1.186 -0.362 SIN 1 O3 polymer 1 1 7 ? ? ? PRD_000400 N1 N1 N 0 1 N N N 7.630 36.371 14.902 5.328 -0.188 -0.250 ALA 2 N polymer 1 1 8 ? ? ? PRD_000400 C5 C5 C 0 1 N N S 6.932 37.068 13.830 4.395 0.893 -0.580 ALA 2 CA polymer 1 1 9 ? ? ? PRD_000400 C6 C6 C 0 1 N N N 7.852 37.395 12.662 3.030 0.562 -0.036 ALA 2 C polymer 1 1 10 ? ? ? PRD_000400 O4 O4 O 0 1 N N N 8.473 38.460 12.630 2.714 -0.594 0.148 ALA 2 O polymer 1 1 11 ? ? ? PRD_000400 C7 C7 C 0 1 N N N 6.293 38.346 14.363 4.314 1.049 -2.100 ALA 2 CB polymer 1 1 12 ? ? ? PRD_000400 N2 N2 N 0 1 N N N 7.791 36.572 11.601 2.159 1.552 0.247 PRO 3 N polymer 1 1 13 ? ? ? PRD_000400 C8 C8 C 0 1 N N S 8.582 36.801 10.389 0.839 1.380 0.871 PRO 3 CA polymer 1 1 14 ? ? ? PRD_000400 C9 C9 C 0 1 N N N 8.287 38.185 9.840 -0.018 0.481 0.017 PRO 3 C polymer 1 1 15 ? ? ? PRD_000400 O5 O5 O 0 1 N N N 7.132 38.534 9.597 0.424 0.024 -1.016 PRO 3 O polymer 1 1 16 ? ? ? PRD_000400 C10 C10 C 0 1 N N N 8.103 35.706 9.436 0.195 2.778 0.973 PRO 3 CB polymer 1 1 17 ? ? ? PRD_000400 C11 C11 C 0 1 N N N 6.749 35.308 9.970 0.950 3.589 -0.113 PRO 3 CG polymer 1 1 18 ? ? ? PRD_000400 C12 C12 C 0 1 N N N 6.921 35.395 11.456 2.376 2.987 -0.013 PRO 3 CD polymer 1 1 19 ? ? ? PRD_000400 N3 N3 N 0 1 N N N 9.313 39.022 9.791 -1.276 0.186 0.401 ALA 4 N polymer 1 1 20 ? ? ? PRD_000400 C13 C13 C 0 1 N N S 9.150 40.365 9.264 -2.109 -0.688 -0.429 ALA 4 CA polymer 1 1 21 ? ? ? PRD_000400 C14 C14 C 0 1 N N N 9.336 40.302 7.763 -3.563 -0.391 -0.167 ALA 4 C polymer 1 1 22 ? ? ? PRD_000400 O6 O6 O 0 1 N N N 10.148 39.513 7.274 -3.873 0.466 0.633 ALA 4 O polymer 1 1 23 ? ? ? PRD_000400 C15 C15 C 0 1 N N N 10.176 41.304 9.882 -1.817 -2.149 -0.084 ALA 4 CB polymer 1 1 24 ? ? ? PRD_000400 N4 N4 N 0 1 N N N 8.485 41.029 7.042 -4.520 -1.077 -0.823 NIT 5 N1 polymer 1 1 25 ? ? ? PRD_000400 C16 C16 C 0 1 Y N N 8.600 41.273 5.594 -5.868 -0.870 -0.512 NIT 5 C1 polymer 1 1 26 ? ? ? PRD_000400 C17 C17 C 0 1 Y N N 7.439 41.538 4.806 -6.313 0.396 -0.154 NIT 5 C2 polymer 1 1 27 ? ? ? PRD_000400 C18 C18 C 0 1 Y N N 7.590 41.816 3.410 -7.644 0.598 0.152 NIT 5 C3 polymer 1 1 28 ? ? ? PRD_000400 C19 C19 C 0 1 Y N N 8.915 41.820 2.828 -8.534 -0.459 0.103 NIT 5 C4 polymer 1 1 29 ? ? ? PRD_000400 N5 N5 N 1 1 N N N 9.129 42.079 1.374 -9.961 -0.240 0.432 NIT 5 N4 polymer 1 1 30 ? ? ? PRD_000400 O7 O7 O -1 1 N N N 8.172 41.897 0.622 -10.349 0.871 0.746 NIT 5 ON1 polymer 1 1 31 ? ? ? PRD_000400 O8 O8 O 0 1 N N N 10.256 42.411 0.972 -10.746 -1.170 0.389 NIT 5 ON2 polymer 1 1 32 ? ? ? PRD_000400 C20 C20 C 0 1 Y N N 10.073 41.556 3.622 -8.095 -1.721 -0.254 NIT 5 C5 polymer 1 1 33 ? ? ? PRD_000400 C21 C21 C 0 1 Y N N 9.906 41.286 4.995 -6.766 -1.928 -0.566 NIT 5 C6 polymer 1 1 34 ? ? ? PRD_000400 H1 H1 H 0 1 N Y N 8.575 33.040 20.260 11.887 -2.105 0.844 SIN 1 HO2 polymer 1 1 35 ? ? ? PRD_000400 H2 H2 H 0 1 N N N 7.093 33.201 16.636 9.106 0.286 0.962 SIN 1 H21 polymer 1 1 36 ? ? ? PRD_000400 H3 H3 H 0 1 N N N 6.242 34.135 17.913 9.288 -0.086 -0.769 SIN 1 H22 polymer 1 1 37 ? ? ? PRD_000400 H4 H4 H 0 1 N N N 7.985 35.881 17.783 7.537 -1.832 -0.578 SIN 1 H31 polymer 1 1 38 ? ? ? PRD_000400 H5 H5 H 0 1 N N N 8.809 34.951 16.487 7.355 -1.459 1.153 SIN 1 H32 polymer 1 1 39 ? ? ? PRD_000400 H6 H6 H 0 1 N N N 8.626 36.292 14.869 4.994 -1.085 -0.092 ALA 2 H polymer 1 1 40 ? ? ? PRD_000400 H7 H7 H 0 1 N N N 6.127 36.420 13.454 4.747 1.824 -0.137 ALA 2 HA polymer 1 1 41 ? ? ? PRD_000400 H8 H8 H 0 1 N N N 5.769 38.863 13.546 3.691 1.909 -2.344 ALA 2 HB1 polymer 1 1 42 ? ? ? PRD_000400 H9 H9 H 0 1 N N N 5.574 38.093 15.157 5.315 1.200 -2.504 ALA 2 HB2 polymer 1 1 43 ? ? ? PRD_000400 H10 H10 H 0 1 N N N 7.074 39.004 14.772 3.879 0.149 -2.535 ALA 2 HB3 polymer 1 1 44 ? ? ? PRD_000400 H11 H11 H 0 1 N N N 9.658 36.689 10.589 0.953 0.948 1.865 PRO 3 HA polymer 1 1 45 ? ? ? PRD_000400 H12 H12 H 0 1 N N N 8.018 36.093 8.410 -0.870 2.729 0.747 PRO 3 HB2 polymer 1 1 46 ? ? ? PRD_000400 H13 H13 H 0 1 N N N 8.793 34.850 9.449 0.362 3.208 1.961 PRO 3 HB3 polymer 1 1 47 ? ? ? PRD_000400 H14 H14 H 0 1 N N N 5.970 36.002 9.623 0.518 3.417 -1.099 PRO 3 HG2 polymer 1 1 48 ? ? ? PRD_000400 H15 H15 H 0 1 N N N 6.491 34.284 9.663 0.958 4.652 0.128 PRO 3 HG3 polymer 1 1 49 ? ? ? PRD_000400 H16 H16 H 0 1 N N N 7.404 34.491 11.855 2.925 3.443 0.811 PRO 3 HD2 polymer 1 1 50 ? ? ? PRD_000400 H17 H17 H 0 1 N N N 5.956 35.548 11.961 2.913 3.125 -0.951 PRO 3 HD3 polymer 1 1 51 ? ? ? PRD_000400 H18 H18 H 0 1 N N N 10.209 38.725 10.121 -1.629 0.551 1.227 ALA 4 H polymer 1 1 52 ? ? ? PRD_000400 H19 H19 H 0 1 N N N 8.140 40.738 9.488 -1.886 -0.511 -1.481 ALA 4 HA polymer 1 1 53 ? ? ? PRD_000400 H20 H20 H 0 1 N N N 10.040 42.316 9.474 -0.765 -2.364 -0.273 ALA 4 HB1 polymer 1 1 54 ? ? ? PRD_000400 H21 H21 H 0 1 N N N 10.041 41.328 10.973 -2.041 -2.326 0.968 ALA 4 HB2 polymer 1 1 55 ? ? ? PRD_000400 H22 H22 H 0 1 N N N 11.189 40.946 9.646 -2.437 -2.799 -0.702 ALA 4 HB3 polymer 1 1 56 ? ? ? PRD_000400 H23 H23 H 0 0 N N N 7.709 41.441 7.520 -4.273 -1.715 -1.511 NIT 5 HN11 polymer 1 1 57 ? ? ? PRD_000400 H24 H24 H 0 1 N N N 6.458 41.529 5.258 -5.618 1.222 -0.115 NIT 5 H2 polymer 1 1 58 ? ? ? PRD_000400 H25 H25 H 0 1 N N N 6.724 42.021 2.798 -7.990 1.582 0.431 NIT 5 H3 polymer 1 1 59 ? ? ? PRD_000400 H26 H26 H 0 1 N N N 11.058 41.563 3.178 -8.792 -2.545 -0.291 NIT 5 H5 polymer 1 1 60 ? ? ? PRD_000400 H27 H27 H 0 1 N N N 10.773 41.086 5.607 -6.424 -2.913 -0.849 NIT 5 H6 polymer 1 1 61 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000400 C1 O1 DOUB N N 1 PRD_000400 C1 O2 SING N N 2 PRD_000400 C1 C2 SING N N 3 PRD_000400 O2 H1 SING N N 4 PRD_000400 C2 C3 SING N N 5 PRD_000400 C2 H2 SING N N 6 PRD_000400 C2 H3 SING N N 7 PRD_000400 C3 C4 SING N N 8 PRD_000400 C3 H4 SING N N 9 PRD_000400 C3 H5 SING N N 10 PRD_000400 C4 O3 DOUB N N 11 PRD_000400 N1 C5 SING N N 12 PRD_000400 N1 H6 SING N N 13 PRD_000400 C5 C6 SING N N 14 PRD_000400 C5 C7 SING N N 15 PRD_000400 C5 H7 SING N N 16 PRD_000400 C6 O4 DOUB N N 17 PRD_000400 C7 H8 SING N N 18 PRD_000400 C7 H9 SING N N 19 PRD_000400 C7 H10 SING N N 20 PRD_000400 N2 C8 SING N N 21 PRD_000400 N2 C12 SING N N 22 PRD_000400 C8 C9 SING N N 23 PRD_000400 C8 C10 SING N N 24 PRD_000400 C8 H11 SING N N 25 PRD_000400 C9 O5 DOUB N N 26 PRD_000400 C10 C11 SING N N 27 PRD_000400 C10 H12 SING N N 28 PRD_000400 C10 H13 SING N N 29 PRD_000400 C11 C12 SING N N 30 PRD_000400 C11 H14 SING N N 31 PRD_000400 C11 H15 SING N N 32 PRD_000400 C12 H16 SING N N 33 PRD_000400 C12 H17 SING N N 34 PRD_000400 N3 C13 SING N N 35 PRD_000400 N3 H18 SING N N 36 PRD_000400 C13 C14 SING N N 37 PRD_000400 C13 C15 SING N N 38 PRD_000400 C13 H19 SING N N 39 PRD_000400 C14 O6 DOUB N N 40 PRD_000400 C15 H20 SING N N 41 PRD_000400 C15 H21 SING N N 42 PRD_000400 C15 H22 SING N N 43 PRD_000400 N4 C16 SING N N 44 PRD_000400 N4 H23 SING N N 45 PRD_000400 C16 C17 DOUB Y N 46 PRD_000400 C16 C21 SING Y N 47 PRD_000400 C17 C18 SING Y N 48 PRD_000400 C17 H24 SING N N 49 PRD_000400 C18 C19 DOUB Y N 50 PRD_000400 C18 H25 SING N N 51 PRD_000400 C19 N5 SING N N 52 PRD_000400 C19 C20 SING Y N 53 PRD_000400 N5 O7 SING N N 54 PRD_000400 N5 O8 DOUB N N 55 PRD_000400 C20 C21 DOUB Y N 56 PRD_000400 C20 H26 SING N N 57 PRD_000400 C21 H27 SING N N 58 PRD_000400 C4 N1 SING N N 59 PRD_000400 C14 N4 SING N N 60 PRD_000400 C6 N2 SING N N 61 PRD_000400 C9 N3 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000400 SMILES ACDLabs 12.01 "O=C(NC(C(=O)Nc1ccc([N+]([O-])=O)cc1)C)C2N(C(=O)C(NC(=O)CCC(=O)O)C)CCC2" PRD_000400 InChI InChI 1.03 "InChI=1S/C21H27N5O8/c1-12(19(30)24-14-5-7-15(8-6-14)26(33)34)23-20(31)16-4-3-11-25(16)21(32)13(2)22-17(27)9-10-18(28)29/h5-8,12-13,16H,3-4,9-11H2,1-2H3,(H,22,27)(H,23,31)(H,24,30)(H,28,29)/t12-,13-,16-/m0/s1" PRD_000400 InChIKey InChI 1.03 NRPFSJAQJJYJLT-XEZPLFJOSA-N PRD_000400 SMILES_CANONICAL CACTVS 3.370 "C[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](C)NC(=O)CCC(O)=O)C(=O)Nc2ccc(cc2)[N+]([O-])=O" PRD_000400 SMILES CACTVS 3.370 "C[CH](NC(=O)[CH]1CCCN1C(=O)[CH](C)NC(=O)CCC(O)=O)C(=O)Nc2ccc(cc2)[N+]([O-])=O" PRD_000400 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H](C(=O)Nc1ccc(cc1)[N+](=O)[O-])NC(=O)[C@@H]2CCCN2C(=O)[C@H](C)NC(=O)CCC(=O)O" PRD_000400 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C(=O)Nc1ccc(cc1)[N+](=O)[O-])NC(=O)C2CCCN2C(=O)C(C)NC(=O)CCC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000400 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(3-carboxypropanoyl)-L-alanyl-L-prolyl-N-(4-nitrophenyl)-L-alaninamide" PRD_000400 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[[(2S)-1-[(2S)-2-[[(2S)-1-[(4-nitrophenyl)amino]-1-oxidanylidene-propan-2-yl]carbamoyl]pyrrolidin-1-yl]-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butanoic acid" #