data_PRDCC_000411 # _chem_comp.id PRD_000411 _chem_comp.name "N-acetyl-L-alanyl-6-ammonio-N-[(1R)-4-carbamimidamido-1-(dihydroxyboranyl)butyl]-L-norleucinamide" _chem_comp.formula "C16 H35 B N7 O5" _chem_comp.formula_weight 416.304 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000411 C1 C1 C 0 1 N N N 4.869 37.228 60.695 6.766 2.202 -0.168 ACE 1 C polymer 1 1 1 ? ? ? PRD_000411 O1 O1 O 0 1 N N N 4.595 37.673 59.565 6.965 2.353 1.018 ACE 1 O polymer 1 1 2 ? ? ? PRD_000411 C2 C2 C 0 1 N N N 4.032 36.187 61.351 7.909 2.308 -1.144 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000411 N1 N1 N 0 1 N N N 6.033 37.484 61.278 5.522 1.934 -0.614 ALA 2 N polymer 1 1 4 ? ? ? PRD_000411 C3 C3 C 0 1 N N S 6.745 37.431 62.542 4.412 1.825 0.335 ALA 2 CA polymer 1 1 5 ? ? ? PRD_000411 C4 C4 C 0 1 N N N 6.520 38.728 63.293 3.329 0.959 -0.256 ALA 2 C polymer 1 1 6 ? ? ? PRD_000411 O2 O2 O 0 1 N N N 6.616 39.814 62.717 3.471 0.480 -1.361 ALA 2 O polymer 1 1 7 ? ? ? PRD_000411 C5 C5 C 0 1 N N N 8.236 37.206 62.299 3.849 3.218 0.624 ALA 2 CB polymer 1 1 8 ? ? ? PRD_000411 N2 N2 N 0 1 N N N 6.225 38.602 64.583 2.203 0.716 0.444 LYS 3 N polymer 1 1 9 ? ? ? PRD_000411 C6 C6 C 0 1 N N S 5.963 39.757 65.445 1.151 -0.126 -0.130 LYS 3 CA polymer 1 1 10 ? ? ? PRD_000411 C7 C7 C 0 1 N N N 7.223 40.533 65.821 -0.174 0.231 0.493 LYS 3 C polymer 1 1 11 ? ? ? PRD_000411 O3 O3 O 0 1 N N N 8.316 40.003 65.748 -0.234 1.103 1.334 LYS 3 O polymer 1 1 12 ? ? ? PRD_000411 C8 C8 C 0 1 N N N 5.282 39.289 66.739 1.466 -1.597 0.149 LYS 3 CB polymer 1 1 13 ? ? ? PRD_000411 C9 C9 C 0 1 N N N 4.116 38.345 66.527 2.747 -1.992 -0.587 LYS 3 CG polymer 1 1 14 ? ? ? PRD_000411 C10 C10 C 0 1 N N N 3.565 37.789 67.835 3.062 -3.464 -0.309 LYS 3 CD polymer 1 1 15 ? ? ? PRD_000411 C11 C11 C 0 1 N N N 2.449 36.792 67.563 4.344 -3.859 -1.045 LYS 3 CE polymer 1 1 16 ? ? ? PRD_000411 N3 N3 N 1 1 N N N 1.919 36.187 68.819 4.647 -5.271 -0.777 LYS 3 NZ polymer 1 1 17 ? ? ? PRD_000411 O4 O4 O 0 1 N N N 9.403 43.088 68.822 -3.191 -0.856 3.114 BOR 4 O1 polymer 1 1 18 ? ? ? PRD_000411 B1 B1 B 0 1 N N N 8.070 43.184 68.238 -2.994 -1.186 1.747 BOR 4 B polymer 1 1 19 ? ? ? PRD_000411 O5 O5 O 0 1 N N N 7.244 42.204 68.945 -3.171 -2.525 1.307 BOR 4 O2 polymer 1 1 20 ? ? ? PRD_000411 C12 C12 C 0 1 N N R 8.184 42.619 66.643 -2.581 -0.072 0.721 BOR 4 CA polymer 1 1 21 ? ? ? PRD_000411 N4 N4 N 0 1 N N N 7.054 41.784 66.236 -1.293 -0.419 0.116 BOR 4 N polymer 1 1 22 ? ? ? PRD_000411 C13 C13 C 0 1 N N N 8.373 43.714 65.577 -3.646 0.036 -0.372 BOR 4 CB polymer 1 1 23 ? ? ? PRD_000411 C14 C14 C 0 1 N N N 8.822 43.103 64.238 -4.991 0.398 0.261 BOR 4 CG polymer 1 1 24 ? ? ? PRD_000411 C15 C15 C 0 1 N N N 9.025 44.071 63.054 -6.056 0.506 -0.832 BOR 4 CD polymer 1 1 25 ? ? ? PRD_000411 N5 N5 N 0 1 N N N 9.560 43.335 61.902 -7.345 0.853 -0.227 BOR 4 NE polymer 1 1 26 ? ? ? PRD_000411 C16 C16 C 0 1 N N N 9.605 43.780 60.646 -8.458 1.005 -1.019 BOR 4 CZ polymer 1 1 27 ? ? ? PRD_000411 N6 N6 N 0 1 N N N 9.147 44.988 60.335 -9.604 1.314 -0.480 BOR 4 NH1 polymer 1 1 28 ? ? ? PRD_000411 N7 N7 N 0 1 N N N 10.101 43.000 59.686 -8.363 0.831 -2.379 BOR 4 NH2 polymer 1 1 29 ? ? ? PRD_000411 H1 H1 H 0 1 N N N 3.196 35.917 60.689 8.830 2.523 -0.603 ACE 1 H1 polymer 1 1 30 ? ? ? PRD_000411 H2 H2 H 0 1 N N N 4.645 35.295 61.550 8.016 1.367 -1.683 ACE 1 H2 polymer 1 1 31 ? ? ? PRD_000411 H3 H3 H 0 1 N N N 3.636 36.579 62.300 7.708 3.112 -1.853 ACE 1 H3 polymer 1 1 32 ? ? ? PRD_000411 H4 H4 H 0 1 N N N 6.654 37.852 60.586 5.363 1.813 -1.563 ALA 2 H polymer 1 1 33 ? ? ? PRD_000411 H5 H5 H 0 1 N N N 6.359 36.599 63.149 4.769 1.378 1.263 ALA 2 HA polymer 1 1 34 ? ? ? PRD_000411 H6 H6 H 0 1 N N N 8.764 37.168 63.263 3.492 3.665 -0.303 ALA 2 HB1 polymer 1 1 35 ? ? ? PRD_000411 H7 H7 H 0 1 N N N 8.381 36.256 61.764 3.023 3.137 1.331 ALA 2 HB2 polymer 1 1 36 ? ? ? PRD_000411 H8 H8 H 0 1 N N N 8.638 38.032 61.694 4.632 3.844 1.052 ALA 2 HB3 polymer 1 1 37 ? ? ? PRD_000411 H9 H9 H 0 1 N N N 6.180 37.685 64.980 2.089 1.099 1.328 LYS 3 H polymer 1 1 38 ? ? ? PRD_000411 H10 H10 H 0 1 N N N 5.278 40.444 64.926 1.102 0.038 -1.207 LYS 3 HA polymer 1 1 39 ? ? ? PRD_000411 H11 H11 H 0 1 N N N 6.033 38.775 67.356 1.602 -1.742 1.220 LYS 3 HB2 polymer 1 1 40 ? ? ? PRD_000411 H12 H12 H 0 1 N N N 4.913 40.177 67.274 0.640 -2.218 -0.200 LYS 3 HB3 polymer 1 1 41 ? ? ? PRD_000411 H13 H13 H 0 1 N N N 3.312 38.889 66.009 2.611 -1.847 -1.659 LYS 3 HG2 polymer 1 1 42 ? ? ? PRD_000411 H14 H14 H 0 1 N N N 4.452 37.505 65.901 3.573 -1.372 -0.239 LYS 3 HG3 polymer 1 1 43 ? ? ? PRD_000411 H15 H15 H 0 1 N N N 4.375 37.285 68.384 3.199 -3.609 0.763 LYS 3 HD2 polymer 1 1 44 ? ? ? PRD_000411 H16 H16 H 0 1 N N N 3.170 38.617 68.442 2.237 -4.084 -0.657 LYS 3 HD3 polymer 1 1 45 ? ? ? PRD_000411 H17 H17 H 0 1 N N N 1.629 37.310 67.045 4.207 -3.713 -2.116 LYS 3 HE2 polymer 1 1 46 ? ? ? PRD_000411 H18 H18 H 0 1 N N N 2.839 35.989 66.920 5.169 -3.238 -0.696 LYS 3 HE3 polymer 1 1 47 ? ? ? PRD_000411 H19 H19 H 0 1 N N N 1.190 35.540 68.596 5.492 -5.532 -1.262 LYS 3 HZ1 polymer 1 1 48 ? ? ? PRD_000411 H20 H20 H 0 1 N N N 2.656 35.707 69.295 4.773 -5.406 0.215 LYS 3 HZ2 polymer 1 1 49 ? ? ? PRD_000411 H21 H21 H 0 1 N N N 1.556 36.908 69.409 3.882 -5.846 -1.100 LYS 3 HZ3 polymer 1 1 50 ? ? ? PRD_000411 H22 H22 H 0 1 N N N 9.982 43.708 68.395 -3.048 0.078 3.317 BOR 4 HO1 polymer 1 1 51 ? ? ? PRD_000411 H23 H23 H 0 1 N N N 6.359 42.227 68.600 -3.425 -3.139 2.009 BOR 4 HO2 polymer 1 1 52 ? ? ? PRD_000411 H24 H24 H 0 1 N N N 9.089 41.993 66.621 -2.494 0.883 1.239 BOR 4 HA polymer 1 1 53 ? ? ? PRD_000411 H25 H25 H 0 1 N N N 6.130 42.165 66.271 -1.245 -1.116 -0.557 BOR 4 H polymer 1 1 54 ? ? ? PRD_000411 H26 H26 H 0 1 N N N 7.420 44.243 65.430 -3.359 0.810 -1.084 BOR 4 HB1 polymer 1 1 55 ? ? ? PRD_000411 H27 H27 H 0 1 N N N 9.137 44.426 65.923 -3.734 -0.919 -0.890 BOR 4 HB2 polymer 1 1 56 ? ? ? PRD_000411 H28 H28 H 0 1 N N N 9.779 42.589 64.413 -5.278 -0.376 0.973 BOR 4 HG1 polymer 1 1 57 ? ? ? PRD_000411 H29 H29 H 0 1 N N N 8.061 42.368 63.938 -4.904 1.354 0.778 BOR 4 HG2 polymer 1 1 58 ? ? ? PRD_000411 H30 H30 H 0 1 N N N 8.060 44.525 62.783 -5.769 1.280 -1.544 BOR 4 HD1 polymer 1 1 59 ? ? ? PRD_000411 H31 H31 H 0 1 N N N 9.733 44.861 63.344 -6.144 -0.449 -1.350 BOR 4 HD2 polymer 1 1 60 ? ? ? PRD_000411 H32 H32 H 0 1 N N N 9.923 42.419 62.075 -7.412 0.975 0.733 BOR 4 HNE polymer 1 1 61 ? ? ? PRD_000411 H33 H33 H 0 1 N N N 9.234 45.181 59.358 -10.389 1.421 -1.039 BOR 4 HH1 polymer 1 1 62 ? ? ? PRD_000411 H34 H34 H 0 0 N N N 10.126 43.325 58.741 -7.510 0.602 -2.780 BOR 4 HH21 polymer 1 1 63 ? ? ? PRD_000411 H35 H35 H 0 0 N N N 10.448 42.089 59.911 -9.148 0.938 -2.938 BOR 4 HH22 polymer 1 1 64 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000411 C1 O1 DOUB N N 1 PRD_000411 C1 C2 SING N N 2 PRD_000411 C2 H1 SING N N 3 PRD_000411 C2 H2 SING N N 4 PRD_000411 C2 H3 SING N N 5 PRD_000411 N1 C3 SING N N 6 PRD_000411 N1 H4 SING N N 7 PRD_000411 C3 C4 SING N N 8 PRD_000411 C3 C5 SING N N 9 PRD_000411 C3 H5 SING N N 10 PRD_000411 C4 O2 DOUB N N 11 PRD_000411 C5 H6 SING N N 12 PRD_000411 C5 H7 SING N N 13 PRD_000411 C5 H8 SING N N 14 PRD_000411 N2 C6 SING N N 15 PRD_000411 N2 H9 SING N N 16 PRD_000411 C6 C7 SING N N 17 PRD_000411 C6 C8 SING N N 18 PRD_000411 C6 H10 SING N N 19 PRD_000411 C7 O3 DOUB N N 20 PRD_000411 C8 C9 SING N N 21 PRD_000411 C8 H11 SING N N 22 PRD_000411 C8 H12 SING N N 23 PRD_000411 C9 C10 SING N N 24 PRD_000411 C9 H13 SING N N 25 PRD_000411 C9 H14 SING N N 26 PRD_000411 C10 C11 SING N N 27 PRD_000411 C10 H15 SING N N 28 PRD_000411 C10 H16 SING N N 29 PRD_000411 C11 N3 SING N N 30 PRD_000411 C11 H17 SING N N 31 PRD_000411 C11 H18 SING N N 32 PRD_000411 N3 H19 SING N N 33 PRD_000411 N3 H20 SING N N 34 PRD_000411 N3 H21 SING N N 35 PRD_000411 O4 B1 SING N N 36 PRD_000411 O4 H22 SING N N 37 PRD_000411 B1 O5 SING N N 38 PRD_000411 B1 C12 SING N N 39 PRD_000411 O5 H23 SING N N 40 PRD_000411 C12 N4 SING N N 41 PRD_000411 C12 C13 SING N N 42 PRD_000411 C12 H24 SING N N 43 PRD_000411 N4 H25 SING N N 44 PRD_000411 C13 C14 SING N N 45 PRD_000411 C13 H26 SING N N 46 PRD_000411 C13 H27 SING N N 47 PRD_000411 C14 C15 SING N N 48 PRD_000411 C14 H28 SING N N 49 PRD_000411 C14 H29 SING N N 50 PRD_000411 C15 N5 SING N N 51 PRD_000411 C15 H30 SING N N 52 PRD_000411 C15 H31 SING N N 53 PRD_000411 N5 C16 SING N N 54 PRD_000411 N5 H32 SING N N 55 PRD_000411 C16 N6 DOUB N N 56 PRD_000411 C16 N7 SING N N 57 PRD_000411 N6 H33 SING N N 58 PRD_000411 N7 H34 SING N N 59 PRD_000411 N7 H35 SING N N 60 PRD_000411 C1 N1 SING N N 61 PRD_000411 C7 N4 SING N N 62 PRD_000411 C4 N2 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000411 SMILES ACDLabs 12.01 "O=C(NC(B(O)O)CCCNC(=[N@H])N)C(NC(=O)C(NC(=O)C)C)CCCC[NH3+]" PRD_000411 InChI InChI 1.03 "InChI=1S/C16H34BN7O5/c1-10(22-11(2)25)14(26)23-12(6-3-4-8-18)15(27)24-13(17(28)29)7-5-9-21-16(19)20/h10,12-13,28-29H,3-9,18H2,1-2H3,(H,22,25)(H,23,26)(H,24,27)(H4,19,20,21)/p+1" PRD_000411 InChIKey InChI 1.03 UXUCOQLOYTZDFC-UHFFFAOYSA-O PRD_000411 SMILES_CANONICAL CACTVS 3.370 "C[C@H](NC(C)=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CCCNC(N)=N)B(O)O" PRD_000411 SMILES CACTVS 3.370 "C[CH](NC(C)=O)C(=O)N[CH](CCCC[NH3+])C(=O)N[CH](CCCNC(N)=N)B(O)O" PRD_000411 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(\N)/NCCC[C@@H](B(O)O)NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@H](C)NC(=O)C" PRD_000411 SMILES "OpenEye OEToolkits" 1.7.6 "B(C(CCCNC(=N)N)NC(=O)C(CCCC[NH3+])NC(=O)C(C)NC(=O)C)(O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000411 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alanyl-6-ammonio-N-[(1R)-4-carbamimidamido-1-(dihydroxyboranyl)butyl]-L-norleucinamide" PRD_000411 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(5S)-5-[[(2S)-2-acetamidopropanoyl]amino]-6-[[(1R)-4-carbamimidamido-1-(dihydroxyboranyl)butyl]amino]-6-oxidanylidene-hexyl]azanium" #