data_PRDCC_000415 # _chem_comp.id PRD_000415 _chem_comp.name Amastatin _chem_comp.formula "C21 H38 N4 O8" _chem_comp.formula_weight 474.548 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000415 N1 N1 N 0 1 N N N 62.132 54.057 16.417 -5.309 0.361 1.475 L2O 1 N polymer 1 1 1 ? ? ? PRD_000415 C1 C1 C 0 1 N N R 62.618 53.556 17.698 -5.400 0.465 0.013 L2O 1 CA polymer 1 1 2 ? ? ? PRD_000415 C2 C2 C 0 1 N N N 62.264 54.632 18.626 -6.784 0.989 -0.375 L2O 1 C2 polymer 1 1 3 ? ? ? PRD_000415 C3 C3 C 0 1 N N N 61.391 54.244 19.774 -6.952 2.419 0.144 L2O 1 C3 polymer 1 1 4 ? ? ? PRD_000415 C4 C4 C 0 1 N N N 61.579 52.737 19.994 -5.957 3.339 -0.565 L2O 1 C4 polymer 1 1 5 ? ? ? PRD_000415 C5 C5 C 0 1 N N N 59.924 54.518 19.420 -8.378 2.898 -0.134 L2O 1 C5 polymer 1 1 6 ? ? ? PRD_000415 C6 C6 C 0 1 N N S 64.125 53.296 17.625 -5.184 -0.915 -0.611 L2O 1 C6 polymer 1 1 7 ? ? ? PRD_000415 O1 O1 O 0 1 N N N 64.508 52.903 16.334 -6.251 -1.784 -0.227 L2O 1 O1 polymer 1 1 8 ? ? ? PRD_000415 C7 C7 C 0 1 N N N 64.510 52.226 18.673 -3.874 -1.484 -0.130 L2O 1 C polymer 1 1 9 ? ? ? PRD_000415 O2 O2 O 0 1 N N N 63.861 51.286 19.038 -3.863 -2.482 0.559 L2O 1 O polymer 1 1 10 ? ? ? PRD_000415 N2 N2 N 0 1 N N N 65.734 52.481 19.188 -2.715 -0.884 -0.466 VAL 2 N polymer 1 1 11 ? ? ? PRD_000415 C8 C8 C 0 1 N N S 66.355 51.652 20.154 -1.441 -1.438 0.002 VAL 2 CA polymer 1 1 12 ? ? ? PRD_000415 C9 C9 C 0 1 N N N 65.818 51.896 21.574 -0.405 -0.344 0.049 VAL 2 C polymer 1 1 13 ? ? ? PRD_000415 O3 O3 O 0 1 N N N 65.228 52.937 21.865 -0.701 0.786 -0.277 VAL 2 O polymer 1 1 14 ? ? ? PRD_000415 C10 C10 C 0 1 N N N 67.896 51.828 20.191 -0.980 -2.537 -0.957 VAL 2 CB polymer 1 1 15 ? ? ? PRD_000415 C11 C11 C 0 1 N N N 68.228 53.156 20.878 -2.032 -3.647 -1.005 VAL 2 CG1 polymer 1 1 16 ? ? ? PRD_000415 C12 C12 C 0 1 N N N 68.591 50.689 20.949 -0.797 -1.948 -2.357 VAL 2 CG2 polymer 1 1 17 ? ? ? PRD_000415 N3 N3 N 0 1 N N N 66.037 50.902 22.448 0.850 -0.622 0.452 VAL 3 N polymer 1 1 18 ? ? ? PRD_000415 C13 C13 C 0 1 N N S 65.371 50.832 23.750 1.857 0.440 0.497 VAL 3 CA polymer 1 1 19 ? ? ? PRD_000415 C14 C14 C 0 1 N N N 66.234 51.333 24.869 3.232 -0.164 0.368 VAL 3 C polymer 1 1 20 ? ? ? PRD_000415 O4 O4 O 0 1 N N N 67.445 51.405 24.628 3.374 -1.367 0.431 VAL 3 O polymer 1 1 21 ? ? ? PRD_000415 C15 C15 C 0 1 N N N 65.288 49.346 24.101 1.752 1.187 1.829 VAL 3 CB polymer 1 1 22 ? ? ? PRD_000415 C16 C16 C 0 1 N N N 64.727 48.534 22.931 0.414 1.927 1.894 VAL 3 CG1 polymer 1 1 23 ? ? ? PRD_000415 C17 C17 C 0 1 N N N 66.759 48.964 24.310 1.838 0.185 2.983 VAL 3 CG2 polymer 1 1 24 ? ? ? PRD_000415 N4 N4 N 0 1 N N N 65.698 51.681 26.020 4.303 0.632 0.181 ASP 4 N polymer 1 1 25 ? ? ? PRD_000415 C18 C18 C 0 1 N N S 66.448 52.168 27.165 5.624 0.041 -0.048 ASP 4 CA polymer 1 1 26 ? ? ? PRD_000415 C19 C19 C 0 1 N N N 65.574 53.141 27.972 6.270 -0.274 1.277 ASP 4 C polymer 1 1 27 ? ? ? PRD_000415 O5 O5 O 0 1 N N N 64.849 53.973 27.422 5.687 -0.029 2.306 ASP 4 O polymer 1 1 28 ? ? ? PRD_000415 C20 C20 C 0 1 N N N 67.775 52.773 26.672 6.499 1.031 -0.820 ASP 4 CB polymer 1 1 29 ? ? ? PRD_000415 C21 C21 C 0 1 N N N 68.388 53.860 27.557 5.918 1.251 -2.192 ASP 4 CG polymer 1 1 30 ? ? ? PRD_000415 O6 O6 O 0 1 N N N 68.071 53.861 28.769 4.907 0.675 -2.520 ASP 4 OD1 polymer 1 1 31 ? ? ? PRD_000415 O7 O7 O 0 1 N N N 69.133 54.693 26.996 6.523 2.087 -3.051 ASP 4 OD2 polymer 1 1 32 ? ? ? PRD_000415 O8 O8 O 0 1 N Y N 65.543 53.120 29.204 7.493 -0.826 1.313 ASP 4 OXT polymer 1 1 33 ? ? ? PRD_000415 H1 H1 H 0 1 N N N 62.327 53.387 15.701 -5.384 1.269 1.908 L2O 1 H polymer 1 1 34 ? ? ? PRD_000415 H2 H2 H 0 1 N Y N 61.145 54.209 16.472 -6.007 -0.271 1.837 L2O 1 H2 polymer 1 1 35 ? ? ? PRD_000415 H3 H3 H 0 1 N N N 62.097 52.626 17.971 -4.636 1.152 -0.351 L2O 1 HA polymer 1 1 36 ? ? ? PRD_000415 H4 H4 H 0 1 N N N 63.198 55.043 19.037 -6.884 0.983 -1.461 L2O 1 H4 polymer 1 1 37 ? ? ? PRD_000415 H5 H5 H 0 1 N N N 61.741 55.412 18.053 -7.551 0.351 0.064 L2O 1 H5 polymer 1 1 38 ? ? ? PRD_000415 H6 H6 H 0 1 N N N 61.672 54.798 20.682 -6.765 2.440 1.217 L2O 1 H6 polymer 1 1 39 ? ? ? PRD_000415 H7 H7 H 0 1 N N N 60.951 52.407 20.835 -6.144 3.318 -1.639 L2O 1 H7 polymer 1 1 40 ? ? ? PRD_000415 H8 H8 H 0 1 N N N 61.286 52.194 19.083 -6.077 4.358 -0.196 L2O 1 H8 polymer 1 1 41 ? ? ? PRD_000415 H9 H9 H 0 1 N N N 62.635 52.529 20.222 -4.941 2.998 -0.367 L2O 1 H9 polymer 1 1 42 ? ? ? PRD_000415 H10 H10 H 0 1 N N N 59.282 54.232 20.266 -9.087 2.242 0.371 L2O 1 H10 polymer 1 1 43 ? ? ? PRD_000415 H11 H11 H 0 1 N N N 59.792 55.589 19.206 -8.498 3.916 0.235 L2O 1 H11 polymer 1 1 44 ? ? ? PRD_000415 H12 H12 H 0 1 N N N 59.645 53.930 18.533 -8.565 2.877 -1.208 L2O 1 H12 polymer 1 1 45 ? ? ? PRD_000415 H13 H13 H 0 1 N N N 65.445 52.748 16.315 -6.329 -1.912 0.728 L2O 1 H14 polymer 1 1 46 ? ? ? PRD_000415 H14 H14 H 0 1 N N N 64.642 54.229 17.895 -5.163 -0.823 -1.697 L2O 1 H15 polymer 1 1 47 ? ? ? PRD_000415 H15 H15 H 0 1 N N N 66.224 53.293 18.872 -2.723 -0.086 -1.017 VAL 2 H polymer 1 1 48 ? ? ? PRD_000415 H16 H16 H 0 1 N N N 66.154 50.600 19.903 -1.572 -1.857 0.999 VAL 2 HA polymer 1 1 49 ? ? ? PRD_000415 H17 H17 H 0 1 N N N 68.274 51.854 19.158 -0.033 -2.948 -0.609 VAL 2 HB polymer 1 1 50 ? ? ? PRD_000415 H18 H18 H 0 0 N N N 69.319 53.290 20.909 -1.703 -4.430 -1.688 VAL 2 HG11 polymer 1 1 51 ? ? ? PRD_000415 H19 H19 H 0 0 N N N 67.773 53.984 20.315 -2.163 -4.066 -0.007 VAL 2 HG12 polymer 1 1 52 ? ? ? PRD_000415 H20 H20 H 0 0 N N N 67.830 53.148 21.903 -2.979 -3.235 -1.352 VAL 2 HG13 polymer 1 1 53 ? ? ? PRD_000415 H21 H21 H 0 0 N N N 69.678 50.857 20.948 -0.047 -1.157 -2.324 VAL 2 HG21 polymer 1 1 54 ? ? ? PRD_000415 H22 H22 H 0 0 N N N 68.225 50.662 21.986 -0.468 -2.731 -3.041 VAL 2 HG22 polymer 1 1 55 ? ? ? PRD_000415 H23 H23 H 0 0 N N N 68.368 49.731 20.456 -1.744 -1.536 -2.705 VAL 2 HG23 polymer 1 1 56 ? ? ? PRD_000415 H24 H24 H 0 1 N N N 66.682 50.179 22.200 1.087 -1.526 0.712 VAL 3 H polymer 1 1 57 ? ? ? PRD_000415 H25 H25 H 0 1 N N N 64.378 51.306 23.746 1.688 1.137 -0.324 VAL 3 HA polymer 1 1 58 ? ? ? PRD_000415 H26 H26 H 0 1 N N N 64.701 49.184 25.017 2.569 1.904 1.909 VAL 3 HB polymer 1 1 59 ? ? ? PRD_000415 H27 H27 H 0 0 N N N 64.679 47.471 23.211 -0.402 1.212 1.786 VAL 3 HG11 polymer 1 1 60 ? ? ? PRD_000415 H28 H28 H 0 0 N N N 63.717 48.895 22.685 0.327 2.435 2.854 VAL 3 HG12 polymer 1 1 61 ? ? ? PRD_000415 H29 H29 H 0 0 N N N 65.382 48.653 22.055 0.365 2.659 1.089 VAL 3 HG13 polymer 1 1 62 ? ? ? PRD_000415 H30 H30 H 0 0 N N N 66.828 47.898 24.572 2.791 -0.342 2.936 VAL 3 HG21 polymer 1 1 63 ? ? ? PRD_000415 H31 H31 H 0 0 N N N 67.321 49.151 23.383 1.763 0.717 3.931 VAL 3 HG22 polymer 1 1 64 ? ? ? PRD_000415 H32 H32 H 0 0 N N N 67.183 49.570 25.125 1.021 -0.532 2.902 VAL 3 HG23 polymer 1 1 65 ? ? ? PRD_000415 H33 H33 H 0 1 N N N 64.705 51.605 26.113 4.200 1.596 0.198 ASP 4 H polymer 1 1 66 ? ? ? PRD_000415 H34 H34 H 0 1 N N N 66.691 51.316 27.817 5.516 -0.876 -0.627 ASP 4 HA polymer 1 1 67 ? ? ? PRD_000415 H35 H35 H 0 1 N N N 68.506 51.956 26.588 6.534 1.979 -0.283 ASP 4 HB2 polymer 1 1 68 ? ? ? PRD_000415 H36 H36 H 0 1 N N N 67.597 53.209 25.678 7.508 0.628 -0.913 ASP 4 HB3 polymer 1 1 69 ? ? ? PRD_000415 H37 H37 H 0 1 N N N 69.427 55.335 27.632 6.112 2.196 -3.920 ASP 4 HD2 polymer 1 1 70 ? ? ? PRD_000415 H38 H38 H 0 1 N Y N 64.937 53.781 29.517 7.866 -1.009 2.186 ASP 4 HXT polymer 1 1 71 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000415 N1 C1 SING N N 1 PRD_000415 N1 H1 SING N N 2 PRD_000415 N1 H2 SING N N 3 PRD_000415 C1 C2 SING N N 4 PRD_000415 C1 C6 SING N N 5 PRD_000415 C1 H3 SING N N 6 PRD_000415 C2 C3 SING N N 7 PRD_000415 C2 H4 SING N N 8 PRD_000415 C2 H5 SING N N 9 PRD_000415 C3 C4 SING N N 10 PRD_000415 C3 C5 SING N N 11 PRD_000415 C3 H6 SING N N 12 PRD_000415 C4 H7 SING N N 13 PRD_000415 C4 H8 SING N N 14 PRD_000415 C4 H9 SING N N 15 PRD_000415 C5 H10 SING N N 16 PRD_000415 C5 H11 SING N N 17 PRD_000415 C5 H12 SING N N 18 PRD_000415 C6 C7 SING N N 19 PRD_000415 C6 O1 SING N N 20 PRD_000415 C6 H14 SING N N 21 PRD_000415 O1 H13 SING N N 22 PRD_000415 C7 O2 DOUB N N 23 PRD_000415 N2 C8 SING N N 24 PRD_000415 N2 H15 SING N N 25 PRD_000415 C8 C9 SING N N 26 PRD_000415 C8 C10 SING N N 27 PRD_000415 C8 H16 SING N N 28 PRD_000415 C9 O3 DOUB N N 29 PRD_000415 C10 C11 SING N N 30 PRD_000415 C10 C12 SING N N 31 PRD_000415 C10 H17 SING N N 32 PRD_000415 C11 H18 SING N N 33 PRD_000415 C11 H19 SING N N 34 PRD_000415 C11 H20 SING N N 35 PRD_000415 C12 H21 SING N N 36 PRD_000415 C12 H22 SING N N 37 PRD_000415 C12 H23 SING N N 38 PRD_000415 N3 C13 SING N N 39 PRD_000415 N3 H24 SING N N 40 PRD_000415 C13 C14 SING N N 41 PRD_000415 C13 C15 SING N N 42 PRD_000415 C13 H25 SING N N 43 PRD_000415 C14 O4 DOUB N N 44 PRD_000415 C15 C16 SING N N 45 PRD_000415 C15 C17 SING N N 46 PRD_000415 C15 H26 SING N N 47 PRD_000415 C16 H27 SING N N 48 PRD_000415 C16 H28 SING N N 49 PRD_000415 C16 H29 SING N N 50 PRD_000415 C17 H30 SING N N 51 PRD_000415 C17 H31 SING N N 52 PRD_000415 C17 H32 SING N N 53 PRD_000415 N4 C18 SING N N 54 PRD_000415 N4 H33 SING N N 55 PRD_000415 C18 C19 SING N N 56 PRD_000415 C18 C20 SING N N 57 PRD_000415 C18 H34 SING N N 58 PRD_000415 C19 O5 DOUB N N 59 PRD_000415 C19 O8 SING N N 60 PRD_000415 C20 C21 SING N N 61 PRD_000415 C20 H35 SING N N 62 PRD_000415 C20 H36 SING N N 63 PRD_000415 C21 O6 DOUB N N 64 PRD_000415 C21 O7 SING N N 65 PRD_000415 O7 H37 SING N N 66 PRD_000415 O8 H38 SING N N 67 PRD_000415 C7 N2 SING N N 68 PRD_000415 C9 N3 SING N N 69 PRD_000415 C14 N4 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000415 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NC(C(=O)O)CC(=O)O)C(C)C)C(C)C)C(O)C(N)CC(C)C" PRD_000415 InChI InChI 1.03 "InChI=1S/C21H38N4O8/c1-9(2)7-12(22)17(28)20(31)25-16(11(5)6)19(30)24-15(10(3)4)18(29)23-13(21(32)33)8-14(26)27/h9-13,15-17,28H,7-8,22H2,1-6H3,(H,23,29)(H,24,30)(H,25,31)(H,26,27)(H,32,33)" PRD_000415 InChIKey InChI 1.03 QFAADIRHLBXJJS-UHFFFAOYSA-N PRD_000415 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@@H](N)[C@H](O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(O)=O)C(O)=O" PRD_000415 SMILES CACTVS 3.370 "CC(C)C[CH](N)[CH](O)C(=O)N[CH](C(C)C)C(=O)N[CH](C(C)C)C(=O)N[CH](CC(O)=O)C(O)=O" PRD_000415 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@H]([C@@H](C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(=O)O)C(=O)O)O)N" PRD_000415 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(C(=O)NC(C(C)C)C(=O)NC(C(C)C)C(=O)NC(CC(=O)O)C(=O)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000415 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2R,3R)-3-amino-2-hydroxy-5-methylhexanoyl]-L-valyl-L-valyl-L-aspartic acid" PRD_000415 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-3-azanyl-5-methyl-2-oxidanyl-hexanoyl]amino]-3-methyl-butanoyl]amino]-3-methyl-butanoyl]amino]butanedioic acid" #