data_PRDCC_000487 # _chem_comp.id PRD_000487 _chem_comp.name Tsushimycin _chem_comp.formula "C59 H93 N13 O20" _chem_comp.formula_weight 1304.445 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000487 N1 N1 N 0 1 N N N 30.821 9.622 38.172 4.900 2.063 1.298 ASP 1 N polymer 1 1 1 ? ? ? PRD_000487 C1 C1 C 0 1 N N S 30.909 10.825 37.382 3.454 2.088 1.068 ASP 1 CA polymer 1 1 2 ? ? ? PRD_000487 C2 C2 C 0 1 N N N 30.504 10.467 35.969 3.181 2.197 -0.410 ASP 1 C polymer 1 1 3 ? ? ? PRD_000487 O1 O1 O 0 1 N N N 30.109 9.333 35.691 4.098 2.376 -1.184 ASP 1 O polymer 1 1 4 ? ? ? PRD_000487 C3 C3 C 0 1 N N N 32.302 11.487 37.388 2.844 3.291 1.789 ASP 1 CB polymer 1 1 5 ? ? ? PRD_000487 C4 C4 C 0 1 N N N 32.153 12.981 37.578 3.470 4.559 1.269 ASP 1 CG polymer 1 1 6 ? ? ? PRD_000487 O2 O2 O 0 1 N N N 31.891 13.710 36.577 4.270 4.511 0.365 ASP 1 OD1 polymer 1 1 7 ? ? ? PRD_000487 O3 O3 O 0 1 N N N 32.261 13.437 38.756 3.140 5.742 1.811 ASP 1 OD2 polymer 1 1 8 ? ? ? PRD_000487 N2 N2 N 0 1 N N N 30.621 11.454 35.102 1.919 2.096 -0.872 VLL 2 N polymer 1 1 9 ? ? ? PRD_000487 C5 C5 C 0 1 N N S 30.368 11.283 33.689 1.667 2.075 -2.315 VLL 2 CA polymer 1 1 10 ? ? ? PRD_000487 C6 C6 C 0 1 N N R 28.937 11.756 33.292 1.292 0.656 -2.747 VLL 2 CB polymer 1 1 11 ? ? ? PRD_000487 C7 C7 C 0 1 N N N 27.883 10.827 33.869 1.268 0.580 -4.275 VLL 2 CG1 polymer 1 1 12 ? ? ? PRD_000487 C8 C8 C 0 1 N N N 31.386 12.106 32.918 0.532 3.007 -2.641 VLL 2 C polymer 1 1 13 ? ? ? PRD_000487 O4 O4 O 0 1 N N N 31.979 13.022 33.489 -0.365 2.608 -3.352 VLL 2 O polymer 1 1 14 ? ? ? PRD_000487 N3 N3 N 0 1 N N N 28.735 13.134 33.788 2.283 -0.306 -2.224 VLL 2 NG2 polymer 1 1 15 ? ? ? PRD_000487 N4 N4 N 0 1 N N N 31.548 11.863 31.623 0.476 4.266 -2.173 CPI 3 N polymer 1 1 16 ? ? ? PRD_000487 C9 C9 C 0 1 N N N 31.083 10.627 30.915 1.596 4.826 -1.418 CPI 3 CE polymer 1 1 17 ? ? ? PRD_000487 C10 C10 C 0 1 N N N 30.285 10.988 29.689 1.951 6.208 -1.967 CPI 3 CD polymer 1 1 18 ? ? ? PRD_000487 C11 C11 C 0 1 N N N 31.112 11.885 28.785 0.691 7.077 -1.989 CPI 3 CG polymer 1 1 19 ? ? ? PRD_000487 C12 C12 C 0 1 N N N 31.470 13.169 29.522 -0.346 6.446 -2.919 CPI 3 CB polymer 1 1 20 ? ? ? PRD_000487 C13 C13 C 0 1 N N R 32.263 12.876 30.800 -0.730 5.064 -2.406 CPI 3 CA polymer 1 1 21 ? ? ? PRD_000487 C14 C14 C 0 1 N N N 33.701 12.513 30.465 -1.515 5.178 -1.124 CPI 3 C polymer 1 1 22 ? ? ? PRD_000487 O5 O5 O 0 1 N N N 34.330 13.069 29.575 -0.972 5.502 -0.089 CPI 3 O polymer 1 1 23 ? ? ? PRD_000487 C15 C15 C 0 1 N N N 36.650 12.338 31.304 -4.945 4.407 -0.052 2AS 4 C polymer 1 1 24 ? ? ? PRD_000487 O6 O6 O 0 1 N N N 37.722 12.306 30.708 -5.384 4.230 -1.169 2AS 4 O polymer 1 1 25 ? ? ? PRD_000487 C16 C16 C 0 1 N N S 35.675 11.207 31.114 -3.559 4.963 0.139 2AS 4 CA polymer 1 1 26 ? ? ? PRD_000487 N5 N5 N 0 1 N N N 34.297 11.629 31.252 -2.853 4.906 -1.159 2AS 4 N polymer 1 1 27 ? ? ? PRD_000487 C17 C17 C 0 1 N N S 35.944 10.485 29.757 -3.646 6.414 0.616 2AS 4 CB polymer 1 1 28 ? ? ? PRD_000487 C18 C18 C 0 1 N N N 37.329 9.792 29.783 -4.481 7.211 -0.352 2AS 4 CG polymer 1 1 29 ? ? ? PRD_000487 O7 O7 O 0 1 N N N 37.633 9.208 30.866 -4.105 7.314 -1.636 2AS 4 OD1 polymer 1 1 30 ? ? ? PRD_000487 C19 C19 C 0 1 N N N 34.845 9.505 29.406 -4.291 6.457 2.003 2AS 4 C4 polymer 1 1 31 ? ? ? PRD_000487 O8 O8 O 0 1 N N N 38.066 9.799 28.788 -5.489 7.758 0.028 2AS 4 OD2 polymer 1 1 32 ? ? ? PRD_000487 N6 N6 N 0 1 N N N 36.345 13.303 32.163 -5.701 4.106 1.038 ASP 5 N polymer 1 1 33 ? ? ? PRD_000487 C20 C20 C 0 1 N N S 37.143 14.509 32.326 -7.056 3.584 0.774 ASP 5 CA polymer 1 1 34 ? ? ? PRD_000487 C21 C21 C 0 1 N N N 37.425 14.821 33.781 -7.408 2.578 1.839 ASP 5 C polymer 1 1 35 ? ? ? PRD_000487 O9 O9 O 0 1 N N N 37.798 15.955 34.121 -6.800 2.552 2.888 ASP 5 O polymer 1 1 36 ? ? ? PRD_000487 C22 C22 C 0 1 N N N 36.486 15.746 31.690 -7.086 2.909 -0.599 ASP 5 CB polymer 1 1 37 ? ? ? PRD_000487 C23 C23 C 0 1 N N N 35.291 16.239 32.508 -5.994 1.873 -0.673 ASP 5 CG polymer 1 1 38 ? ? ? PRD_000487 O10 O10 O 0 1 N N N 34.567 15.371 33.119 -5.344 1.608 0.310 ASP 5 OD1 polymer 1 1 39 ? ? ? PRD_000487 O11 O11 O 0 1 N N N 35.054 17.474 32.580 -5.742 1.245 -1.833 ASP 5 OD2 polymer 1 1 40 ? ? ? PRD_000487 N7 N7 N 0 1 N N N 37.262 13.868 34.654 -8.422 1.696 1.601 GLY 6 N polymer 1 1 41 ? ? ? PRD_000487 C24 C24 C 0 1 N N N 37.498 14.126 36.066 -8.719 0.751 2.697 GLY 6 CA polymer 1 1 42 ? ? ? PRD_000487 C25 C25 C 0 1 N N N 36.262 14.476 36.836 -8.855 -0.635 2.122 GLY 6 C polymer 1 1 43 ? ? ? PRD_000487 O12 O12 O 0 1 N N N 35.152 14.604 36.338 -9.324 -0.797 1.015 GLY 6 O polymer 1 1 44 ? ? ? PRD_000487 N8 N8 N 0 1 N N N 36.444 14.570 38.162 -8.444 -1.702 2.860 ASP 7 N polymer 1 1 45 ? ? ? PRD_000487 C26 C26 C 0 1 N N S 35.348 14.779 39.083 -8.611 -3.034 2.248 ASP 7 CA polymer 1 1 46 ? ? ? PRD_000487 C27 C27 C 0 1 N N N 34.692 16.103 38.723 -7.408 -3.875 2.587 ASP 7 C polymer 1 1 47 ? ? ? PRD_000487 O13 O13 O 0 1 N N N 35.355 17.103 38.482 -6.733 -3.621 3.562 ASP 7 O polymer 1 1 48 ? ? ? PRD_000487 C28 C28 C 0 1 N N N 35.839 14.829 40.518 -8.725 -2.890 0.729 ASP 7 CB polymer 1 1 49 ? ? ? PRD_000487 C29 C29 C 0 1 N N N 34.717 14.942 41.529 -7.509 -2.174 0.199 ASP 7 CG polymer 1 1 50 ? ? ? PRD_000487 O14 O14 O 0 1 N N N 34.777 15.852 42.378 -6.587 -1.921 0.939 ASP 7 OD1 polymer 1 1 51 ? ? ? PRD_000487 O15 O15 O 0 1 N N N 33.781 14.123 41.498 -7.450 -1.816 -1.093 ASP 7 OD2 polymer 1 1 52 ? ? ? PRD_000487 N9 N9 N 0 1 N N N 33.358 16.072 38.698 -7.091 -4.927 1.778 GLY 8 N polymer 1 1 53 ? ? ? PRD_000487 C30 C30 C 0 1 N N N 32.666 17.298 38.292 -5.882 -5.691 2.161 GLY 8 CA polymer 1 1 54 ? ? ? PRD_000487 C31 C31 C 0 1 N N N 32.989 17.637 36.841 -5.098 -5.990 0.911 GLY 8 C polymer 1 1 55 ? ? ? PRD_000487 O16 O16 O 0 1 N N N 33.080 16.740 35.967 -5.676 -6.157 -0.142 GLY 8 O polymer 1 1 56 ? ? ? PRD_000487 N10 N10 N 0 1 N N N 33.156 18.926 36.544 -3.743 -6.071 0.961 VDL 9 N polymer 1 1 57 ? ? ? PRD_000487 C32 C32 C 0 1 N N R 33.352 19.375 35.178 -3.059 -6.326 -0.321 VDL 9 CA polymer 1 1 58 ? ? ? PRD_000487 C33 C33 C 0 1 N N R 33.487 20.903 35.175 -3.339 -7.760 -0.774 VDL 9 CB polymer 1 1 59 ? ? ? PRD_000487 C34 C34 C 0 1 N N N 33.805 21.405 33.787 -3.026 -8.726 0.371 VDL 9 CG1 polymer 1 1 60 ? ? ? PRD_000487 C35 C35 C 0 1 N N N 32.199 18.931 34.336 -1.577 -6.136 -0.143 VDL 9 C polymer 1 1 61 ? ? ? PRD_000487 O17 O17 O 0 1 N N N 31.014 19.171 34.648 -1.024 -6.524 0.864 VDL 9 O polymer 1 1 62 ? ? ? PRD_000487 N11 N11 N 0 1 N N N 32.272 21.533 35.719 -4.754 -7.888 -1.148 VDL 9 NG2 polymer 1 1 63 ? ? ? PRD_000487 N12 N12 N 0 1 N N N 32.466 18.300 33.194 -0.862 -5.522 -1.131 VAL 10 N polymer 1 1 64 ? ? ? PRD_000487 C36 C36 C 0 1 N N S 31.407 17.771 32.390 0.601 -5.482 -0.933 VAL 10 CA polymer 1 1 65 ? ? ? PRD_000487 C37 C37 C 0 1 N N N 30.696 16.654 33.120 1.109 -4.096 -1.226 VAL 10 C polymer 1 1 66 ? ? ? PRD_000487 O18 O18 O 0 1 N N N 31.388 15.762 33.683 0.447 -3.125 -0.926 VAL 10 O polymer 1 1 67 ? ? ? PRD_000487 C38 C38 C 0 1 N N N 31.946 17.300 31.028 1.272 -6.482 -1.877 VAL 10 CB polymer 1 1 68 ? ? ? PRD_000487 C39 C39 C 0 1 N N N 30.833 16.724 30.156 0.792 -7.897 -1.547 VAL 10 CG1 polymer 1 1 69 ? ? ? PRD_000487 C40 C40 C 0 1 N N N 32.635 18.439 30.330 0.903 -6.143 -3.323 VAL 10 CG2 polymer 1 1 70 ? ? ? PRD_000487 N13 N13 N 0 1 N N N 29.392 16.619 33.184 2.311 -3.946 -1.830 PRO 11 N polymer 1 1 71 ? ? ? PRD_000487 C41 C41 C 0 1 N N S 28.720 15.512 33.826 3.000 -2.673 -2.048 PRO 11 CA polymer 1 1 72 ? ? ? PRD_000487 C42 C42 C 0 1 N N N 28.976 14.195 33.059 2.022 -1.619 -2.494 PRO 11 C polymer 1 1 73 ? ? ? PRD_000487 O19 O19 O 0 1 N N N 29.269 14.169 31.896 1.011 -1.933 -3.087 PRO 11 O polymer 1 1 74 ? ? ? PRD_000487 C43 C43 C 0 1 N N N 27.236 15.882 33.758 4.059 -2.894 -3.138 PRO 11 CB polymer 1 1 75 ? ? ? PRD_000487 C44 C44 C 0 1 N N N 27.229 17.366 33.719 4.131 -4.412 -3.359 PRO 11 CG polymer 1 1 76 ? ? ? PRD_000487 C45 C45 C 0 1 N N N 28.413 17.694 32.820 3.133 -5.031 -2.371 PRO 11 CD polymer 1 1 77 ? ? ? PRD_000487 O20 O20 O 0 1 N Y N 31.236 10.593 40.121 4.647 1.010 3.234 LNG 12 O1 non-polymer 2 2 78 ? ? ? PRD_000487 C46 C46 C 0 1 N N N 30.991 9.578 39.466 5.393 1.541 2.438 LNG 12 C1 non-polymer 2 2 79 ? ? ? PRD_000487 C47 C47 C 0 1 N N N 30.897 8.231 40.129 6.871 1.616 2.725 LNG 12 C2 non-polymer 2 2 80 ? ? ? PRD_000487 C48 C48 C 0 1 N N N 30.177 7.211 39.340 7.158 0.964 4.053 LNG 12 C3 non-polymer 2 2 81 ? ? ? PRD_000487 C49 C49 C 0 1 N N N 28.864 7.200 39.357 8.040 -0.002 4.131 LNG 12 C4 non-polymer 2 2 82 ? ? ? PRD_000487 C50 C50 C 0 1 N N N 28.084 8.187 40.169 8.838 -0.394 2.915 LNG 12 C5 non-polymer 2 2 83 ? ? ? PRD_000487 C51 C51 C 0 1 N N N 26.635 7.726 40.329 10.331 -0.323 3.240 LNG 12 C6 non-polymer 2 2 84 ? ? ? PRD_000487 C52 C52 C 0 1 N N N 26.297 7.329 41.757 11.142 -0.721 2.005 LNG 12 C7 non-polymer 2 2 85 ? ? ? PRD_000487 C53 C53 C 0 1 N N N 24.928 7.851 42.205 12.635 -0.650 2.330 LNG 12 C8 non-polymer 2 2 86 ? ? ? PRD_000487 C54 C54 C 0 1 N N N ? ? ? 13.445 -1.048 1.094 LNG 12 C9 non-polymer 2 2 87 ? ? ? PRD_000487 C55 C55 C 0 1 N N N ? ? ? 14.939 -0.977 1.419 LNG 12 C10 non-polymer 2 2 88 ? ? ? PRD_000487 C56 C56 C 0 1 N N N ? ? ? 15.749 -1.376 0.184 LNG 12 C11 non-polymer 2 2 89 ? ? ? PRD_000487 C57 C57 C 0 1 N N N ? ? ? 17.242 -1.305 0.509 LNG 12 C12 non-polymer 2 2 90 ? ? ? PRD_000487 C58 C58 C 0 1 N N N ? ? ? 18.049 -1.821 -0.684 LNG 12 C13 non-polymer 2 2 91 ? ? ? PRD_000487 C59 C59 C 0 1 N N N ? ? ? 17.633 0.146 0.799 LNG 12 C14 non-polymer 2 2 92 ? ? ? PRD_000487 H1 H1 H 0 1 N N N 30.616 8.766 37.698 5.504 2.418 0.627 ASP 1 H polymer 1 1 93 ? ? ? PRD_000487 H2 H2 H 0 1 N N N 30.187 11.560 37.768 3.009 1.170 1.453 ASP 1 HA polymer 1 1 94 ? ? ? PRD_000487 H3 H3 H 0 1 N N N 32.901 11.071 38.211 1.769 3.317 1.609 ASP 1 HB2 polymer 1 1 95 ? ? ? PRD_000487 H4 H4 H 0 1 N N N 32.806 11.288 36.431 3.030 3.206 2.860 ASP 1 HB3 polymer 1 1 96 ? ? ? PRD_000487 H5 H5 H 0 1 N N N 32.117 14.376 38.747 3.569 6.528 1.444 ASP 1 HD2 polymer 1 1 97 ? ? ? PRD_000487 H6 H6 H 0 1 N N N 30.895 12.356 35.435 1.178 2.037 -0.249 VLL 2 H2 polymer 1 1 98 ? ? ? PRD_000487 H7 H7 H 0 1 N N N 30.477 10.224 33.411 2.564 2.392 -2.846 VLL 2 HA polymer 1 1 99 ? ? ? PRD_000487 H8 H8 H 0 1 N N N 28.859 11.746 32.195 0.306 0.407 -2.357 VLL 2 HB polymer 1 1 100 ? ? ? PRD_000487 H9 H9 H 0 0 N N N 26.883 11.180 33.577 2.254 0.832 -4.667 VLL 2 HG11 polymer 1 1 101 ? ? ? PRD_000487 H10 H10 H 0 0 N N N 28.040 9.809 33.483 1.001 -0.431 -4.585 VLL 2 HG12 polymer 1 1 102 ? ? ? PRD_000487 H11 H11 H 0 0 N N N 27.962 10.819 34.966 0.533 1.285 -4.663 VLL 2 HG13 polymer 1 1 103 ? ? ? PRD_000487 H12 H12 H 0 0 N N N 28.400 13.262 34.721 3.065 -0.025 -1.723 VLL 2 HG22 polymer 1 1 104 ? ? ? PRD_000487 H13 H13 H 0 1 N N N 31.958 10.031 30.615 1.317 4.913 -0.368 CPI 3 HE2 polymer 1 1 105 ? ? ? PRD_000487 H14 H14 H 0 1 N N N 30.453 10.036 31.596 2.460 4.167 -1.509 CPI 3 HE3 polymer 1 1 106 ? ? ? PRD_000487 H15 H15 H 0 1 N N N 30.015 10.071 29.146 2.703 6.672 -1.329 CPI 3 HD2 polymer 1 1 107 ? ? ? PRD_000487 H16 H16 H 0 1 N N N 29.370 11.518 29.992 2.342 6.109 -2.980 CPI 3 HD3 polymer 1 1 108 ? ? ? PRD_000487 H17 H17 H 0 1 N N N 32.035 11.361 28.495 0.281 7.147 -0.981 CPI 3 HG2 polymer 1 1 109 ? ? ? PRD_000487 H18 H18 H 0 1 N N N 30.531 12.131 27.884 0.943 8.074 -2.349 CPI 3 HG3 polymer 1 1 110 ? ? ? PRD_000487 H19 H19 H 0 1 N N N 32.078 13.804 28.861 -1.233 7.078 -2.954 CPI 3 HB2 polymer 1 1 111 ? ? ? PRD_000487 H20 H20 H 0 1 N N N 30.544 13.699 29.789 0.073 6.357 -3.921 CPI 3 HB3 polymer 1 1 112 ? ? ? PRD_000487 H21 H21 H 0 1 N N N 32.293 13.810 31.380 -1.345 4.562 -3.158 CPI 3 HA polymer 1 1 113 ? ? ? PRD_000487 H22 H22 H 0 1 N N N 35.880 10.469 31.904 -3.022 4.365 0.876 2AS 4 HA polymer 1 1 114 ? ? ? PRD_000487 H23 H23 H 0 1 N N N 33.758 11.226 31.992 -3.313 4.689 -1.986 2AS 4 H polymer 1 1 115 ? ? ? PRD_000487 H24 H24 H 0 1 N N N 35.974 11.257 28.974 -2.644 6.840 0.668 2AS 4 HB2 polymer 1 1 116 ? ? ? PRD_000487 H25 H25 H 0 1 N N N 35.077 9.022 28.445 -3.687 5.880 2.703 2AS 4 H4 polymer 1 1 117 ? ? ? PRD_000487 H26 H26 H 0 1 N N N 34.771 8.740 30.193 -4.353 7.491 2.342 2AS 4 H4A polymer 1 1 118 ? ? ? PRD_000487 H27 H27 H 0 1 N N N 33.888 10.041 29.325 -5.293 6.031 1.950 2AS 4 H4B polymer 1 1 119 ? ? ? PRD_000487 H28 H28 H 0 1 N N N 38.486 8.799 30.777 -4.673 7.836 -2.220 2AS 4 HD2 polymer 1 1 120 ? ? ? PRD_000487 H29 H29 H 0 1 N N N 35.526 13.196 32.726 -5.368 4.229 1.941 ASP 5 H polymer 1 1 121 ? ? ? PRD_000487 H30 H30 H 0 1 N N N 38.110 14.356 31.824 -7.774 4.404 0.795 ASP 5 HA polymer 1 1 122 ? ? ? PRD_000487 H31 H31 H 0 1 N N N 37.232 16.552 31.627 -8.053 2.428 -0.746 ASP 5 HB2 polymer 1 1 123 ? ? ? PRD_000487 H32 H32 H 0 1 N N N 36.142 15.486 30.678 -6.931 3.658 -1.375 ASP 5 HB3 polymer 1 1 124 ? ? ? PRD_000487 H33 H33 H 0 1 N N N 34.295 17.620 33.132 -5.032 0.589 -1.832 ASP 5 HD2 polymer 1 1 125 ? ? ? PRD_000487 H34 H34 H 0 1 N N N 36.975 12.959 34.353 -8.917 1.691 0.767 GLY 6 H polymer 1 1 126 ? ? ? PRD_000487 H35 H35 H 0 1 N N N 37.940 13.224 36.513 -7.905 0.766 3.423 GLY 6 HA2 polymer 1 1 127 ? ? ? PRD_000487 H36 H36 H 0 1 N N N 38.207 14.963 36.151 -9.651 1.037 3.184 GLY 6 HA3 polymer 1 1 128 ? ? ? PRD_000487 H37 H37 H 0 1 N N N 37.372 14.493 38.527 -8.061 -1.592 3.744 ASP 7 H polymer 1 1 129 ? ? ? PRD_000487 H38 H38 H 0 1 N N N 34.609 13.971 38.982 -9.510 -3.507 2.641 ASP 7 HA polymer 1 1 130 ? ? ? PRD_000487 H39 H39 H 0 1 N N N 36.406 13.909 40.726 -8.791 -3.878 0.274 ASP 7 HB2 polymer 1 1 131 ? ? ? PRD_000487 H40 H40 H 0 1 N N N 36.500 15.701 40.631 -9.619 -2.316 0.484 ASP 7 HB3 polymer 1 1 132 ? ? ? PRD_000487 H41 H41 H 0 1 N N N 33.168 14.315 42.198 -6.650 -1.359 -1.386 ASP 7 HD2 polymer 1 1 133 ? ? ? PRD_000487 H42 H42 H 0 1 N N N 32.852 15.246 38.946 -7.624 -5.159 1.001 GLY 8 H polymer 1 1 134 ? ? ? PRD_000487 H43 H43 H 0 1 N N N 31.581 17.153 38.397 -5.274 -5.098 2.844 GLY 8 HA2 polymer 1 1 135 ? ? ? PRD_000487 H44 H44 H 0 1 N N N 32.989 18.127 38.938 -6.175 -6.624 2.643 GLY 8 HA3 polymer 1 1 136 ? ? ? PRD_000487 H45 H45 H 0 1 N N N 33.146 19.601 37.282 -3.253 -5.968 1.792 VDL 9 H polymer 1 1 137 ? ? ? PRD_000487 H46 H46 H 0 1 N N N 34.279 18.941 34.775 -3.427 -5.629 -1.074 VDL 9 HA polymer 1 1 138 ? ? ? PRD_000487 H47 H47 H 0 1 N N N 34.333 21.162 35.829 -2.713 -8.000 -1.633 VDL 9 HB polymer 1 1 139 ? ? ? PRD_000487 H48 H48 H 0 0 N N N 33.898 22.501 33.805 -3.697 -8.529 1.207 VDL 9 HG11 polymer 1 1 140 ? ? ? PRD_000487 H49 H49 H 0 0 N N N 34.752 20.963 33.445 -3.164 -9.752 0.029 VDL 9 HG12 polymer 1 1 141 ? ? ? PRD_000487 H50 H50 H 0 0 N N N 32.997 21.117 33.099 -1.994 -8.586 0.692 VDL 9 HG13 polymer 1 1 142 ? ? ? PRD_000487 H51 H51 H 0 0 N N N 32.378 22.527 35.709 -5.341 -7.947 -0.330 VDL 9 HG21 polymer 1 1 143 ? ? ? PRD_000487 H52 H52 H 0 0 N N N 31.484 21.277 35.159 -5.040 -7.126 -1.745 VDL 9 HG22 polymer 1 1 144 ? ? ? PRD_000487 H53 H53 H 0 1 N N N 33.415 18.195 32.896 -1.288 -5.136 -1.913 VAL 10 H polymer 1 1 145 ? ? ? PRD_000487 H54 H54 H 0 1 N N N 30.674 18.568 32.198 0.835 -5.744 0.099 VAL 10 HA polymer 1 1 146 ? ? ? PRD_000487 H55 H55 H 0 1 N N N 32.685 16.505 31.211 2.353 -6.427 -1.756 VAL 10 HB polymer 1 1 147 ? ? ? PRD_000487 H56 H56 H 0 0 N N N 31.253 16.398 29.193 -0.297 -7.931 -1.592 VAL 10 HG11 polymer 1 1 148 ? ? ? PRD_000487 H57 H57 H 0 0 N N N 30.376 15.864 30.666 1.208 -8.599 -2.269 VAL 10 HG12 polymer 1 1 149 ? ? ? PRD_000487 H58 H58 H 0 0 N N N 30.068 17.495 29.981 1.123 -8.167 -0.544 VAL 10 HG13 polymer 1 1 150 ? ? ? PRD_000487 H59 H59 H 0 0 N N N 33.018 18.096 29.357 1.107 -5.089 -3.513 VAL 10 HG21 polymer 1 1 151 ? ? ? PRD_000487 H60 H60 H 0 0 N N N 31.919 19.260 30.173 1.496 -6.756 -4.002 VAL 10 HG22 polymer 1 1 152 ? ? ? PRD_000487 H61 H61 H 0 0 N N N 33.472 18.795 30.948 -0.156 -6.343 -3.484 VAL 10 HG23 polymer 1 1 153 ? ? ? PRD_000487 H62 H62 H 0 1 N N N 29.036 15.404 34.874 3.483 -2.354 -1.123 PRO 11 HA polymer 1 1 154 ? ? ? PRD_000487 H63 H63 H 0 1 N N N 26.772 15.466 32.851 3.759 -2.394 -4.059 PRO 11 HB2 polymer 1 1 155 ? ? ? PRD_000487 H64 H64 H 0 1 N N N 26.701 15.513 34.646 5.025 -2.517 -2.803 PRO 11 HB3 polymer 1 1 156 ? ? ? PRD_000487 H65 H65 H 0 1 N N N 26.290 17.745 33.289 3.847 -4.656 -4.382 PRO 11 HG2 polymer 1 1 157 ? ? ? PRD_000487 H66 H66 H 0 1 N N N 27.368 17.788 34.725 5.138 -4.774 -3.152 PRO 11 HG3 polymer 1 1 158 ? ? ? PRD_000487 H67 H67 H 0 1 N N N 28.817 18.693 33.041 3.671 -5.526 -1.562 PRO 11 HD2 polymer 1 1 159 ? ? ? PRD_000487 H68 H68 H 0 1 N N N 28.135 17.637 31.757 2.499 -5.752 -2.888 PRO 11 HD3 polymer 1 1 160 ? ? ? PRD_000487 H69 H69 H 0 0 N N N 31.918 7.866 40.313 7.420 1.097 1.939 LNG 12 H2C1 non-polymer 2 2 161 ? ? ? PRD_000487 H70 H70 H 0 0 N N N 30.374 8.356 41.089 7.182 2.660 2.758 LNG 12 H2C2 non-polymer 2 2 162 ? ? ? PRD_000487 H71 H71 H 0 0 N N N 30.723 6.484 38.757 6.637 1.293 4.940 LNG 12 H3C1 non-polymer 2 2 163 ? ? ? PRD_000487 H72 H72 H 0 0 N N N 28.335 6.462 38.772 8.195 -0.516 5.068 LNG 12 H4C1 non-polymer 2 2 164 ? ? ? PRD_000487 H73 H73 H 0 0 N N N 28.545 8.282 41.163 8.578 -1.411 2.622 LNG 12 H5C1 non-polymer 2 2 165 ? ? ? PRD_000487 H74 H74 H 0 0 N N N 28.099 9.164 39.663 8.611 0.289 2.096 LNG 12 H5C2 non-polymer 2 2 166 ? ? ? PRD_000487 H75 H75 H 0 0 N N N 25.969 8.548 40.026 10.592 0.694 3.533 LNG 12 H6C1 non-polymer 2 2 167 ? ? ? PRD_000487 H76 H76 H 0 0 N N N 26.468 6.858 39.674 10.558 -1.006 4.059 LNG 12 H6C2 non-polymer 2 2 168 ? ? ? PRD_000487 H77 H77 H 0 0 N N N 26.296 6.231 41.827 10.882 -1.738 1.712 LNG 12 H7C1 non-polymer 2 2 169 ? ? ? PRD_000487 H78 H78 H 0 0 N N N 27.067 7.738 42.428 10.915 -0.038 1.186 LNG 12 H7C2 non-polymer 2 2 170 ? ? ? PRD_000487 H79 H79 H 0 0 N N N 24.517 7.270 43.044 12.895 0.367 2.622 LNG 12 H8C1 non-polymer 2 2 171 ? ? ? PRD_000487 H80 H80 H 0 0 N N N 24.959 8.916 42.477 12.862 -1.333 3.148 LNG 12 H8C2 non-polymer 2 2 172 ? ? ? PRD_000487 H81 H81 H 0 0 N N N ? ? ? 13.185 -2.066 0.802 LNG 12 H9C1 non-polymer 2 2 173 ? ? ? PRD_000487 H82 H82 H 0 0 N N N ? ? ? 13.219 -0.366 0.276 LNG 12 H9C2 non-polymer 2 2 174 ? ? ? PRD_000487 H83 H83 H 0 0 N N N ? ? ? 15.199 0.040 1.712 LNG 12 H101 non-polymer 2 2 175 ? ? ? PRD_000487 H84 H84 H 0 0 N N N ? ? ? 15.165 -1.660 2.238 LNG 12 H102 non-polymer 2 2 176 ? ? ? PRD_000487 H85 H85 H 0 0 N N N ? ? ? 15.489 -2.393 -0.108 LNG 12 H111 non-polymer 2 2 177 ? ? ? PRD_000487 H86 H86 H 0 0 N N N ? ? ? 15.523 -0.693 -0.635 LNG 12 H112 non-polymer 2 2 178 ? ? ? PRD_000487 H87 H87 H 0 1 N N N ? ? ? 17.454 -1.919 1.384 LNG 12 H12 non-polymer 2 2 179 ? ? ? PRD_000487 H88 H88 H 0 0 N N N ? ? ? 17.838 -1.207 -1.559 LNG 12 H131 non-polymer 2 2 180 ? ? ? PRD_000487 H89 H89 H 0 0 N N N ? ? ? 19.113 -1.771 -0.452 LNG 12 H132 non-polymer 2 2 181 ? ? ? PRD_000487 H90 H90 H 0 0 N N N ? ? ? 17.771 -2.855 -0.890 LNG 12 H133 non-polymer 2 2 182 ? ? ? PRD_000487 H91 H91 H 0 0 N N N ? ? ? 17.422 0.761 -0.076 LNG 12 H141 non-polymer 2 2 183 ? ? ? PRD_000487 H92 H92 H 0 0 N N N ? ? ? 17.058 0.514 1.649 LNG 12 H142 non-polymer 2 2 184 ? ? ? PRD_000487 H93 H93 H 0 0 N N N ? ? ? 18.697 0.197 1.031 LNG 12 H143 non-polymer 2 2 185 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000487 N1 C1 SING N N 1 PRD_000487 N1 H1 SING N N 2 PRD_000487 C1 C2 SING N N 3 PRD_000487 C1 C3 SING N N 4 PRD_000487 C1 H2 SING N N 5 PRD_000487 C2 O1 DOUB N N 6 PRD_000487 C3 C4 SING N N 7 PRD_000487 C3 H3 SING N N 8 PRD_000487 C3 H4 SING N N 9 PRD_000487 C4 O2 DOUB N N 10 PRD_000487 C4 O3 SING N N 11 PRD_000487 O3 H5 SING N N 12 PRD_000487 N2 C5 SING N N 13 PRD_000487 N2 H6 SING N N 14 PRD_000487 C5 C6 SING N N 15 PRD_000487 C5 C8 SING N N 16 PRD_000487 C5 H7 SING N N 17 PRD_000487 C6 C7 SING N N 18 PRD_000487 C6 N3 SING N N 19 PRD_000487 C6 H8 SING N N 20 PRD_000487 C7 H9 SING N N 21 PRD_000487 C7 H10 SING N N 22 PRD_000487 C7 H11 SING N N 23 PRD_000487 C8 O4 DOUB N N 24 PRD_000487 N3 H12 SING N N 25 PRD_000487 N4 C9 SING N N 26 PRD_000487 N4 C13 SING N N 27 PRD_000487 C9 C10 SING N N 28 PRD_000487 C9 H13 SING N N 29 PRD_000487 C9 H14 SING N N 30 PRD_000487 C10 C11 SING N N 31 PRD_000487 C10 H15 SING N N 32 PRD_000487 C10 H16 SING N N 33 PRD_000487 C11 C12 SING N N 34 PRD_000487 C11 H17 SING N N 35 PRD_000487 C11 H18 SING N N 36 PRD_000487 C12 C13 SING N N 37 PRD_000487 C12 H19 SING N N 38 PRD_000487 C12 H20 SING N N 39 PRD_000487 C13 C14 SING N N 40 PRD_000487 C13 H21 SING N N 41 PRD_000487 C14 O5 DOUB N N 42 PRD_000487 C15 O6 DOUB N N 43 PRD_000487 C15 C16 SING N N 44 PRD_000487 C16 N5 SING N N 45 PRD_000487 C16 C17 SING N N 46 PRD_000487 C16 H22 SING N N 47 PRD_000487 N5 H23 SING N N 48 PRD_000487 C17 C18 SING N N 49 PRD_000487 C17 C19 SING N N 50 PRD_000487 C17 H24 SING N N 51 PRD_000487 C18 O7 SING N N 52 PRD_000487 C18 O8 DOUB N N 53 PRD_000487 C19 H25 SING N N 54 PRD_000487 C19 H26 SING N N 55 PRD_000487 C19 H27 SING N N 56 PRD_000487 O7 H28 SING N N 57 PRD_000487 N6 C20 SING N N 58 PRD_000487 N6 H29 SING N N 59 PRD_000487 C20 C21 SING N N 60 PRD_000487 C20 C22 SING N N 61 PRD_000487 C20 H30 SING N N 62 PRD_000487 C21 O9 DOUB N N 63 PRD_000487 C22 C23 SING N N 64 PRD_000487 C22 H31 SING N N 65 PRD_000487 C22 H32 SING N N 66 PRD_000487 C23 O10 DOUB N N 67 PRD_000487 C23 O11 SING N N 68 PRD_000487 O11 H33 SING N N 69 PRD_000487 N7 C24 SING N N 70 PRD_000487 N7 H34 SING N N 71 PRD_000487 C24 C25 SING N N 72 PRD_000487 C24 H35 SING N N 73 PRD_000487 C24 H36 SING N N 74 PRD_000487 C25 O12 DOUB N N 75 PRD_000487 N8 C26 SING N N 76 PRD_000487 N8 H37 SING N N 77 PRD_000487 C26 C27 SING N N 78 PRD_000487 C26 C28 SING N N 79 PRD_000487 C26 H38 SING N N 80 PRD_000487 C27 O13 DOUB N N 81 PRD_000487 C28 C29 SING N N 82 PRD_000487 C28 H39 SING N N 83 PRD_000487 C28 H40 SING N N 84 PRD_000487 C29 O14 DOUB N N 85 PRD_000487 C29 O15 SING N N 86 PRD_000487 O15 H41 SING N N 87 PRD_000487 N9 C30 SING N N 88 PRD_000487 N9 H42 SING N N 89 PRD_000487 C30 C31 SING N N 90 PRD_000487 C30 H43 SING N N 91 PRD_000487 C30 H44 SING N N 92 PRD_000487 C31 O16 DOUB N N 93 PRD_000487 N10 C32 SING N N 94 PRD_000487 N10 H45 SING N N 95 PRD_000487 C32 C33 SING N N 96 PRD_000487 C32 C35 SING N N 97 PRD_000487 C32 H46 SING N N 98 PRD_000487 C33 C34 SING N N 99 PRD_000487 C33 N11 SING N N 100 PRD_000487 C33 H47 SING N N 101 PRD_000487 C34 H48 SING N N 102 PRD_000487 C34 H49 SING N N 103 PRD_000487 C34 H50 SING N N 104 PRD_000487 C35 O17 DOUB N N 105 PRD_000487 N11 H51 SING N N 106 PRD_000487 N11 H52 SING N N 107 PRD_000487 N12 C36 SING N N 108 PRD_000487 N12 H53 SING N N 109 PRD_000487 C36 C37 SING N N 110 PRD_000487 C36 C38 SING N N 111 PRD_000487 C36 H54 SING N N 112 PRD_000487 C37 O18 DOUB N N 113 PRD_000487 C38 C39 SING N N 114 PRD_000487 C38 C40 SING N N 115 PRD_000487 C38 H55 SING N N 116 PRD_000487 C39 H56 SING N N 117 PRD_000487 C39 H57 SING N N 118 PRD_000487 C39 H58 SING N N 119 PRD_000487 C40 H59 SING N N 120 PRD_000487 C40 H60 SING N N 121 PRD_000487 C40 H61 SING N N 122 PRD_000487 N13 C41 SING N N 123 PRD_000487 N13 C45 SING N N 124 PRD_000487 C41 C42 SING N N 125 PRD_000487 C41 C43 SING N N 126 PRD_000487 C41 H62 SING N N 127 PRD_000487 C42 O19 DOUB N N 128 PRD_000487 C43 C44 SING N N 129 PRD_000487 C43 H63 SING N N 130 PRD_000487 C43 H64 SING N N 131 PRD_000487 C44 C45 SING N N 132 PRD_000487 C44 H65 SING N N 133 PRD_000487 C44 H66 SING N N 134 PRD_000487 C45 H67 SING N N 135 PRD_000487 C45 H68 SING N N 136 PRD_000487 O20 C46 DOUB N N 137 PRD_000487 C46 C47 SING N N 138 PRD_000487 C47 C48 SING N N 139 PRD_000487 C47 H69 SING N N 140 PRD_000487 C47 H70 SING N N 141 PRD_000487 C48 C49 DOUB N Z 142 PRD_000487 C48 H71 SING N N 143 PRD_000487 C49 C50 SING N N 144 PRD_000487 C49 H72 SING N N 145 PRD_000487 C50 C51 SING N N 146 PRD_000487 C50 H73 SING N N 147 PRD_000487 C50 H74 SING N N 148 PRD_000487 C51 C52 SING N N 149 PRD_000487 C51 H75 SING N N 150 PRD_000487 C51 H76 SING N N 151 PRD_000487 C52 C53 SING N N 152 PRD_000487 C52 H77 SING N N 153 PRD_000487 C52 H78 SING N N 154 PRD_000487 C53 C54 SING N N 155 PRD_000487 C53 H79 SING N N 156 PRD_000487 C53 H80 SING N N 157 PRD_000487 C54 C55 SING N N 158 PRD_000487 C54 H81 SING N N 159 PRD_000487 C54 H82 SING N N 160 PRD_000487 C55 C56 SING N N 161 PRD_000487 C55 H83 SING N N 162 PRD_000487 C55 H84 SING N N 163 PRD_000487 C56 C57 SING N N 164 PRD_000487 C56 H85 SING N N 165 PRD_000487 C56 H86 SING N N 166 PRD_000487 C57 C58 SING N N 167 PRD_000487 C57 C59 SING N N 168 PRD_000487 C57 H87 SING N N 169 PRD_000487 C58 H88 SING N N 170 PRD_000487 C58 H89 SING N N 171 PRD_000487 C58 H90 SING N N 172 PRD_000487 C59 H91 SING N N 173 PRD_000487 C59 H92 SING N N 174 PRD_000487 C59 H93 SING N N 175 PRD_000487 C2 N2 SING N N 176 PRD_000487 C8 N4 SING N N 177 PRD_000487 N3 C42 SING N N 178 PRD_000487 C14 N5 SING N N 179 PRD_000487 C15 N6 SING N N 180 PRD_000487 C31 N10 SING N N 181 PRD_000487 C35 N12 SING N N 182 PRD_000487 N1 C46 SING N N 183 PRD_000487 C21 N7 SING N N 184 PRD_000487 C25 N8 SING N N 185 PRD_000487 C27 N9 SING N N 186 PRD_000487 C37 N13 SING N N 187 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000487 SMILES ACDLabs 12.01 "O=C(O)CC(NC(=O)C\C=C/CCCCCCCC(C)C)C(=O)NC1C(=O)N3C(C(=O)NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)N2C(C(=O)NC1C)CCC2)C(C)C)C(N)C)CC(=O)O)CC(=O)O)C(C(=O)O)C)CCCC3" PRD_000487 InChI InChI 1.03 "InChI=1S/C59H93N13O20/c1-30(2)19-14-12-10-8-9-11-13-15-22-40(73)64-37(27-45(80)81)52(84)70-49-34(7)63-53(85)39-21-18-24-72(39)57(89)46(31(3)4)68-56(88)48(33(6)60)67-42(75)29-62-50(82)35(25-43(76)77)65-41(74)28-61-51(83)36(26-44(78)79)66-55(87)47(32(5)59(91)92)69-54(86)38-20-16-17-23-71(38)58(49)90/h13,15,30-39,46-49H,8-12,14,16-29,60H2,1-7H3,(H,61,83)(H,62,82)(H,63,85)(H,64,73)(H,65,74)(H,66,87)(H,67,75)(H,68,88)(H,69,86)(H,70,84)(H,76,77)(H,78,79)(H,80,81)(H,91,92)/t32-,33?,34+,35?,36?,37?,38-,39+,46?,47?,48?,49-/m0/s1" PRD_000487 InChIKey InChI 1.03 BYWOWQCRVFUOLF-PNTXLYRMSA-N PRD_000487 SMILES_CANONICAL CACTVS 3.370 "CC(C)CCCCCCC\C=C/CC(=O)N[C@@H](CC(O)=O)C(=O)N[C@H]1[C@@H](C)NC(=O)[C@@H]2CCCN2C(=O)[C@@H](NC(=O)[C@H](NC(=O)CNC(=O)[C@H](CC(O)=O)NC(=O)CNC(=O)[C@H](CC(O)=O)NC(=O)[C@@H](NC(=O)[C@H]3CCCCN3C1=O)[C@H](C)C(O)=O)[C@@H](C)N)C(C)C" PRD_000487 SMILES CACTVS 3.370 "CC(C)CCCCCCCC=CCC(=O)N[CH](CC(O)=O)C(=O)N[CH]1[CH](C)NC(=O)[CH]2CCCN2C(=O)[CH](NC(=O)[CH](NC(=O)CNC(=O)[CH](CC(O)=O)NC(=O)CNC(=O)[CH](CC(O)=O)NC(=O)[CH](NC(=O)[CH]3CCCCN3C1=O)[CH](C)C(O)=O)[CH](C)N)C(C)C" PRD_000487 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H]1[C@@H](C(=O)N2CCCC[C@@H]2C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)NCC(=O)N[C@@H](C(=O)N[C@H](C(=O)N3CCC[C@H]3C(=O)N1)C(C)C)[C@@H](C)N)CC(=O)O)CC(=O)O)[C@H](C)C(=O)O)NC(=O)[C@H](CC(=O)O)NC(=O)C/C=C\CCCCCCCC(C)C" PRD_000487 SMILES "OpenEye OEToolkits" 1.7.6 "CC1C(C(=O)N2CCCCC2C(=O)NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)N3CCCC3C(=O)N1)C(C)C)C(C)N)CC(=O)O)CC(=O)O)C(C)C(=O)O)NC(=O)C(CC(=O)O)NC(=O)CC=CCCCCCCCC(C)C" # _pdbx_chem_comp_identifier.comp_id PRD_000487 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "N-[(6S,9S,15S,21R,24R,26aS,33S,34R,36aR)-9-[(1S)-1-aminoethyl]-24-[(1S)-1-carboxyethyl]-15,21-bis(carboxymethyl)-34-methyl-5,8,11,14,17,20,23,26,32,36-decaoxo-6-(propan-2-yl)tetratriacontahydro-1H,5H-pyrido[1,2-a]pyrrolo[1,2-y][1,4,7,10,13,16,19,22,25,28]decaazacyclohentriacontin-33-yl]-N~2~-[(3Z)-12-methyltridec-3-enoyl]-L-alpha-asparagine" #