data_PRDCC_000693 # _chem_comp.id PRD_000693 _chem_comp.name "(PHQ)LPA(B27) PEPTIDE" _chem_comp.formula "C26 H40 N4 O6 S" _chem_comp.formula_weight 536.684 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000693 C1 C1 C 0 1 N N N -5.102 2.813 11.450 4.844 -0.428 -0.097 PHQ 1 C1 polymer 1 1 1 ? ? ? PRD_000693 O1 O1 O 0 1 N N N -5.041 3.705 10.633 5.214 -1.575 -0.253 PHQ 1 O1 polymer 1 1 2 ? ? ? PRD_000693 O2 O2 O 0 1 N N N -5.524 3.109 12.647 5.746 0.570 -0.047 PHQ 1 O2 polymer 1 1 3 ? ? ? PRD_000693 C2 C2 C 0 1 N N N -6.588 4.118 12.908 7.144 0.202 -0.187 PHQ 1 C2 polymer 1 1 4 ? ? ? PRD_000693 C3 C3 C 0 1 Y N N -7.916 3.418 13.074 7.999 1.441 -0.106 PHQ 1 C3 polymer 1 1 5 ? ? ? PRD_000693 C4 C4 C 0 1 Y N N -8.606 2.953 11.949 8.475 1.874 1.117 PHQ 1 C4 polymer 1 1 6 ? ? ? PRD_000693 C5 C5 C 0 1 Y N N -9.836 2.303 12.100 9.259 3.010 1.191 PHQ 1 C5 polymer 1 1 7 ? ? ? PRD_000693 C6 C6 C 0 1 Y N N -10.377 2.119 13.377 9.568 3.712 0.041 PHQ 1 C6 polymer 1 1 8 ? ? ? PRD_000693 C7 C7 C 0 1 Y N N -9.688 2.584 14.503 9.093 3.278 -1.182 PHQ 1 C7 polymer 1 1 9 ? ? ? PRD_000693 C8 C8 C 0 1 Y N N -8.456 3.234 14.352 8.312 2.140 -1.257 PHQ 1 C8 polymer 1 1 10 ? ? ? PRD_000693 N1 N1 N 0 1 N N N -4.751 1.592 11.149 3.529 -0.155 0.021 LEU 2 N polymer 1 1 11 ? ? ? PRD_000693 C9 C9 C 0 1 N N S -4.261 1.257 9.779 2.547 -1.240 -0.039 LEU 2 CA polymer 1 1 12 ? ? ? PRD_000693 C10 C10 C 0 1 N N N -5.192 1.877 8.720 1.219 -0.692 -0.494 LEU 2 C polymer 1 1 13 ? ? ? PRD_000693 O3 O3 O 0 1 N N N -6.357 1.541 8.659 0.947 0.474 -0.302 LEU 2 O polymer 1 1 14 ? ? ? PRD_000693 C11 C11 C 0 1 N N N -4.254 -0.264 9.592 2.392 -1.866 1.349 LEU 2 CB polymer 1 1 15 ? ? ? PRD_000693 C12 C12 C 0 1 N N N -4.481 -0.972 10.933 3.693 -2.570 1.740 LEU 2 CG polymer 1 1 16 ? ? ? PRD_000693 C13 C13 C 0 1 N N N -5.952 -0.859 11.346 3.582 -3.087 3.175 LEU 2 CD1 polymer 1 1 17 ? ? ? PRD_000693 C14 C14 C 0 1 N N N -4.100 -2.446 10.786 3.941 -3.745 0.792 LEU 2 CD2 polymer 1 1 18 ? ? ? PRD_000693 N2 N2 N 0 1 N N N -4.692 2.762 7.877 0.335 -1.497 -1.115 PRO 3 N polymer 1 1 19 ? ? ? PRD_000693 C15 C15 C 0 1 N N S -5.523 3.393 6.809 -0.946 -1.073 -1.700 PRO 3 CA polymer 1 1 20 ? ? ? PRD_000693 C16 C16 C 0 1 N N N -6.269 2.345 5.978 -1.818 -0.458 -0.636 PRO 3 C polymer 1 1 21 ? ? ? PRD_000693 O4 O4 O 0 1 N N N -6.439 1.217 6.393 -1.416 -0.378 0.506 PRO 3 O polymer 1 1 22 ? ? ? PRD_000693 C17 C17 C 0 1 N N N -4.517 4.137 5.929 -1.627 -2.334 -2.273 PRO 3 CB polymer 1 1 23 ? ? ? PRD_000693 C18 C18 C 0 1 N N N -3.297 4.333 6.763 -0.955 -3.484 -1.478 PRO 3 CG polymer 1 1 24 ? ? ? PRD_000693 C19 C19 C 0 1 N N N -3.305 3.259 7.851 0.493 -2.948 -1.324 PRO 3 CD polymer 1 1 25 ? ? ? PRD_000693 N3 N3 N 0 1 N N N -6.713 2.703 4.804 -3.044 0.002 -0.952 ALA 4 N polymer 1 1 26 ? ? ? PRD_000693 C20 C20 C 0 1 N N S -7.442 1.717 3.960 -3.892 0.600 0.083 ALA 4 CA polymer 1 1 27 ? ? ? PRD_000693 C21 C21 C 0 1 N N N -8.555 1.077 4.789 -5.339 0.470 -0.316 ALA 4 C polymer 1 1 28 ? ? ? PRD_000693 O5 O5 O 0 1 N N N -8.323 0.165 5.558 -5.634 -0.069 -1.362 ALA 4 O polymer 1 1 29 ? ? ? PRD_000693 C22 C22 C 0 1 N N N -6.472 0.634 3.490 -3.537 2.080 0.241 ALA 4 CB polymer 1 1 30 ? ? ? PRD_000693 N4 N4 N 0 1 N N N -9.759 1.553 4.646 -6.306 0.952 0.489 B27 5 N polymer 1 1 31 ? ? ? PRD_000693 C23 C23 C 0 1 N N S -10.885 0.977 5.433 -7.713 0.826 0.101 B27 5 CA polymer 1 1 32 ? ? ? PRD_000693 C24 C24 C 0 1 N N R -12.110 1.889 5.302 -8.240 -0.544 0.533 B27 5 CB polymer 1 1 33 ? ? ? PRD_000693 C25 C25 C 0 1 N N N -12.984 1.757 6.550 -7.346 -1.641 -0.048 B27 5 CG2 polymer 1 1 34 ? ? ? PRD_000693 O6 O6 O 0 1 N N N -11.678 3.236 5.170 -8.232 -0.629 1.960 B27 5 OG1 polymer 1 1 35 ? ? ? PRD_000693 S1 S1 S 0 1 N N N -10.484 -0.653 3.274 -8.005 3.545 0.158 B27 5 SG polymer 1 1 36 ? ? ? PRD_000693 C26 C26 C 0 1 N N N -11.212 -0.428 4.917 -8.531 1.925 0.782 B27 5 C polymer 1 1 37 ? ? ? PRD_000693 H1 H1 H 0 1 N N N -6.349 4.674 13.827 7.421 -0.484 0.614 PHQ 1 H21 polymer 1 1 38 ? ? ? PRD_000693 H2 H2 H 0 1 N N N -6.646 4.818 12.061 7.297 -0.283 -1.151 PHQ 1 H22 polymer 1 1 39 ? ? ? PRD_000693 H3 H3 H 0 1 N N N -8.189 3.096 10.963 8.233 1.325 2.016 PHQ 1 H41 polymer 1 1 40 ? ? ? PRD_000693 H4 H4 H 0 1 N N N -10.367 1.944 11.231 9.630 3.348 2.147 PHQ 1 H51 polymer 1 1 41 ? ? ? PRD_000693 H5 H5 H 0 1 N N N -11.327 1.618 13.494 10.181 4.600 0.099 PHQ 1 H61 polymer 1 1 42 ? ? ? PRD_000693 H6 H6 H 0 1 N N N -10.106 2.442 15.489 9.334 3.827 -2.081 PHQ 1 H71 polymer 1 1 43 ? ? ? PRD_000693 H7 H7 H 0 1 N N N -7.924 3.593 15.221 7.944 1.799 -2.213 PHQ 1 H81 polymer 1 1 44 ? ? ? PRD_000693 H8 H8 H 0 1 N N N -4.811 0.874 11.843 3.234 0.760 0.146 LEU 2 H polymer 1 1 45 ? ? ? PRD_000693 H9 H9 H 0 1 N N N -3.242 1.647 9.640 2.887 -2.000 -0.743 LEU 2 HA polymer 1 1 46 ? ? ? PRD_000693 H10 H10 H 0 1 N N N -5.056 -0.546 8.894 2.169 -1.085 2.076 LEU 2 HB2 polymer 1 1 47 ? ? ? PRD_000693 H11 H11 H 0 1 N N N -3.282 -0.573 9.179 1.578 -2.590 1.332 LEU 2 HB3 polymer 1 1 48 ? ? ? PRD_000693 H12 H12 H 0 1 N N N -3.849 -0.506 11.703 4.522 -1.866 1.670 LEU 2 HG polymer 1 1 49 ? ? ? PRD_000693 H13 H13 H 0 0 N N N -6.103 -1.370 12.308 2.752 -3.791 3.244 LEU 2 HD11 polymer 1 1 50 ? ? ? PRD_000693 H14 H14 H 0 0 N N N -6.224 0.202 11.447 4.508 -3.589 3.454 LEU 2 HD12 polymer 1 1 51 ? ? ? PRD_000693 H15 H15 H 0 0 N N N -6.585 -1.328 10.578 3.405 -2.250 3.850 LEU 2 HD13 polymer 1 1 52 ? ? ? PRD_000693 H16 H16 H 0 0 N N N -4.259 -2.964 11.743 3.112 -4.449 0.861 LEU 2 HD21 polymer 1 1 53 ? ? ? PRD_000693 H17 H17 H 0 0 N N N -4.726 -2.911 10.010 4.021 -3.376 -0.231 LEU 2 HD22 polymer 1 1 54 ? ? ? PRD_000693 H18 H18 H 0 0 N N N -3.041 -2.524 10.499 4.868 -4.247 1.070 LEU 2 HD23 polymer 1 1 55 ? ? ? PRD_000693 H19 H19 H 0 1 N N N -6.239 4.105 7.247 -0.768 -0.351 -2.496 PRO 3 HA polymer 1 1 56 ? ? ? PRD_000693 H20 H20 H 0 1 N N N -4.277 3.540 5.037 -2.701 -2.311 -2.085 PRO 3 HB2 polymer 1 1 57 ? ? ? PRD_000693 H21 H21 H 0 1 N N N -4.927 5.110 5.620 -1.423 -2.431 -3.339 PRO 3 HB3 polymer 1 1 58 ? ? ? PRD_000693 H22 H22 H 0 1 N N N -2.396 4.230 6.140 -1.431 -3.618 -0.507 PRO 3 HG2 polymer 1 1 59 ? ? ? PRD_000693 H23 H23 H 0 1 N N N -3.313 5.332 7.222 -0.966 -4.412 -2.049 PRO 3 HG3 polymer 1 1 60 ? ? ? PRD_000693 H24 H24 H 0 1 N N N -3.030 3.691 8.824 1.070 -3.140 -2.229 PRO 3 HD2 polymer 1 1 61 ? ? ? PRD_000693 H25 H25 H 0 1 N N N -2.607 2.447 7.599 0.976 -3.405 -0.461 PRO 3 HD3 polymer 1 1 62 ? ? ? PRD_000693 H26 H26 H 0 1 N N N -6.564 3.635 4.473 -3.366 -0.062 -1.865 ALA 4 H polymer 1 1 63 ? ? ? PRD_000693 H27 H27 H 0 1 N N N -7.880 2.221 3.086 -3.728 0.084 1.029 ALA 4 HA polymer 1 1 64 ? ? ? PRD_000693 H28 H28 H 0 1 N N N -7.010 -0.095 2.866 -4.168 2.524 1.010 ALA 4 HB1 polymer 1 1 65 ? ? ? PRD_000693 H29 H29 H 0 1 N N N -5.665 1.095 2.902 -2.490 2.174 0.529 ALA 4 HB2 polymer 1 1 66 ? ? ? PRD_000693 H30 H30 H 0 1 N N N -6.042 0.122 4.364 -3.701 2.595 -0.706 ALA 4 HB3 polymer 1 1 67 ? ? ? PRD_000693 H31 H31 H 0 1 N N N -9.927 2.305 4.008 -6.070 1.383 1.325 B27 5 H polymer 1 1 68 ? ? ? PRD_000693 H32 H32 H 0 1 N N N -10.599 0.912 6.493 -7.802 0.924 -0.981 B27 5 HA polymer 1 1 69 ? ? ? PRD_000693 H33 H33 H 0 1 N N N -12.693 1.582 4.421 -9.259 -0.674 0.167 B27 5 HB polymer 1 1 70 ? ? ? PRD_000693 H34 H34 H 0 0 N N N -12.434 3.805 5.088 -7.356 -0.523 2.355 B27 5 HOG1 polymer 1 1 71 ? ? ? PRD_000693 H35 H35 H 0 1 N N N -12.403 2.050 7.437 -7.721 -2.617 0.260 B27 5 HG2 polymer 1 1 72 ? ? ? PRD_000693 H36 H36 H 0 0 N N N -13.862 2.412 6.454 -7.352 -1.577 -1.136 B27 5 HG2A polymer 1 1 73 ? ? ? PRD_000693 H37 H37 H 0 0 N N N -13.315 0.713 6.657 -6.327 -1.512 0.318 B27 5 HG2B polymer 1 1 74 ? ? ? PRD_000693 H38 H38 H 0 1 N N N -10.798 -1.178 5.607 -9.589 1.778 0.565 B27 5 HX polymer 1 1 75 ? ? ? PRD_000693 H39 H39 H 0 1 N N N -12.303 -0.551 4.854 -8.371 1.881 1.860 B27 5 HXA polymer 1 1 76 ? ? ? PRD_000693 H40 H40 H 0 1 N N N -10.844 -1.868 2.983 -8.794 4.400 0.832 B27 5 HSG polymer 1 1 77 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000693 C1 O1 DOUB N N 1 PRD_000693 C1 O2 SING N N 2 PRD_000693 O2 C2 SING N N 3 PRD_000693 C2 C3 SING N N 4 PRD_000693 C2 H1 SING N N 5 PRD_000693 C2 H2 SING N N 6 PRD_000693 C3 C4 DOUB Y N 7 PRD_000693 C3 C8 SING Y N 8 PRD_000693 C4 C5 SING Y N 9 PRD_000693 C4 H3 SING N N 10 PRD_000693 C5 C6 DOUB Y N 11 PRD_000693 C5 H4 SING N N 12 PRD_000693 C6 C7 SING Y N 13 PRD_000693 C6 H5 SING N N 14 PRD_000693 C7 C8 DOUB Y N 15 PRD_000693 C7 H6 SING N N 16 PRD_000693 C8 H7 SING N N 17 PRD_000693 N1 C9 SING N N 18 PRD_000693 N1 H8 SING N N 19 PRD_000693 C9 C10 SING N N 20 PRD_000693 C9 C11 SING N N 21 PRD_000693 C9 H9 SING N N 22 PRD_000693 C10 O3 DOUB N N 23 PRD_000693 C11 C12 SING N N 24 PRD_000693 C11 H10 SING N N 25 PRD_000693 C11 H11 SING N N 26 PRD_000693 C12 C13 SING N N 27 PRD_000693 C12 C14 SING N N 28 PRD_000693 C12 H12 SING N N 29 PRD_000693 C13 H13 SING N N 30 PRD_000693 C13 H14 SING N N 31 PRD_000693 C13 H15 SING N N 32 PRD_000693 C14 H16 SING N N 33 PRD_000693 C14 H17 SING N N 34 PRD_000693 C14 H18 SING N N 35 PRD_000693 N2 C15 SING N N 36 PRD_000693 N2 C19 SING N N 37 PRD_000693 C15 C16 SING N N 38 PRD_000693 C15 C17 SING N N 39 PRD_000693 C15 H19 SING N N 40 PRD_000693 C16 O4 DOUB N N 41 PRD_000693 C17 C18 SING N N 42 PRD_000693 C17 H20 SING N N 43 PRD_000693 C17 H21 SING N N 44 PRD_000693 C18 C19 SING N N 45 PRD_000693 C18 H22 SING N N 46 PRD_000693 C18 H23 SING N N 47 PRD_000693 C19 H24 SING N N 48 PRD_000693 C19 H25 SING N N 49 PRD_000693 N3 C20 SING N N 50 PRD_000693 N3 H26 SING N N 51 PRD_000693 C20 C21 SING N N 52 PRD_000693 C20 C22 SING N N 53 PRD_000693 C20 H27 SING N N 54 PRD_000693 C21 O5 DOUB N N 55 PRD_000693 C22 H28 SING N N 56 PRD_000693 C22 H29 SING N N 57 PRD_000693 C22 H30 SING N N 58 PRD_000693 H31 N4 SING N N 59 PRD_000693 N4 C23 SING N N 60 PRD_000693 C26 C23 SING N N 61 PRD_000693 C23 C24 SING N N 62 PRD_000693 C23 H32 SING N N 63 PRD_000693 C25 C24 SING N N 64 PRD_000693 C24 O6 SING N N 65 PRD_000693 C24 H33 SING N N 66 PRD_000693 H36 C25 SING N N 67 PRD_000693 C25 H37 SING N N 68 PRD_000693 C25 H35 SING N N 69 PRD_000693 H34 O6 SING N N 70 PRD_000693 S1 C26 SING N N 71 PRD_000693 S1 H40 SING N N 72 PRD_000693 H38 C26 SING N N 73 PRD_000693 C26 H39 SING N N 74 PRD_000693 C1 N1 SING N N 75 PRD_000693 C21 N4 SING N N 76 PRD_000693 C10 N2 SING N N 77 PRD_000693 C16 N3 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000693 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(O)C)CS)C)C2N(C(=O)C(NC(=O)OCc1ccccc1)CC(C)C)CCC2" PRD_000693 InChI InChI 1.03 "InChI=1S/C26H40N4O6S/c1-16(2)13-20(29-26(35)36-14-19-9-6-5-7-10-19)25(34)30-12-8-11-22(30)24(33)27-17(3)23(32)28-21(15-37)18(4)31/h5-7,9-10,16-18,20-22,31,37H,8,11-15H2,1-4H3,(H,27,33)(H,28,32)(H,29,35)/t17-,18+,20-,21+,22-/m0/s1" PRD_000693 InChIKey InChI 1.03 BQJVQSSKIPELOQ-PLSULTGPSA-N PRD_000693 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N2CCC[C@H]2C(=O)N[C@@H](C)C(=O)N[C@H](CS)[C@@H](C)O" PRD_000693 SMILES CACTVS 3.370 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N2CCC[CH]2C(=O)N[CH](C)C(=O)N[CH](CS)[CH](C)O" PRD_000693 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]([C@@H](CS)NC(=O)[C@H](C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)OCc2ccccc2)O" PRD_000693 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)N1CCCC1C(=O)NC(C)C(=O)NC(CS)C(C)O)NC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000693 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-leucyl-L-prolyl-N-[(2S,3R)-3-hydroxy-1-sulfanylbutan-2-yl]-L-alaninamide" PRD_000693 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(phenylmethyl) N-[(2S)-4-methyl-1-oxidanylidene-1-[(2S)-2-[[(2S)-1-oxidanylidene-1-[[(2S,3R)-3-oxidanyl-1-sulfanyl-butan-2-yl]amino]propan-2-yl]carbamoyl]pyrrolidin-1-yl]pentan-2-yl]carbamate" #