data_PRDCC_001136
#
_chem_comp.id PRD_001136
_chem_comp.name "SUGAR (6-MER)"
_chem_comp.formula "C57 H82 O26"
_chem_comp.formula_weight 1183.245
_chem_comp.pdbx_release_status REF_ONLY
_chem_comp.type peptide-like
_chem_comp.pdbx_type ?
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge ?
_chem_comp.pdbx_initial_date ?
_chem_comp.pdbx_modified_date ?
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ?
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag ?
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag ?
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_pcm ?
_chem_comp.pdbx_processing_site ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_ref_id
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
PRD_001136 C1 C1 C 0 1 N N S -6.591 28.587 58.822 -8.579 -3.462 -0.595 1GL 1 C1 polymer 1 1 1 ? ? ?
PRD_001136 C2 C2 C 0 1 N N N -7.862 29.286 58.685 -9.916 -4.205 -0.648 1GL 1 C2 polymer 1 1 2 ? ? ?
PRD_001136 C3 C3 C 0 1 N N R -8.697 28.840 57.513 -9.652 -5.714 -0.685 1GL 1 C3 polymer 1 1 3 ? ? ?
PRD_001136 O1 O1 O 0 1 N N N -9.899 29.594 57.358 -8.937 -6.045 -1.877 1GL 1 O3 polymer 1 1 4 ? ? ?
PRD_001136 C4 C4 C 0 1 N N R -7.881 28.840 56.284 -8.818 -6.105 0.539 1GL 1 C4 polymer 1 1 5 ? ? ?
PRD_001136 O2 O2 O 0 1 N N N -7.522 30.128 55.955 -8.504 -7.497 0.477 1GL 1 O4 polymer 1 1 6 ? ? ?
PRD_001136 C5 C5 C 0 1 N N N -8.055 30.681 54.758 -8.357 -8.117 1.757 1GL 1 CME polymer 1 1 7 ? ? ?
PRD_001136 C6 C6 C 0 1 N N R -6.618 27.979 56.449 -7.523 -5.288 0.546 1GL 1 C5 polymer 1 1 8 ? ? ?
PRD_001136 O3 O3 O 0 1 N N N -5.879 28.508 57.580 -7.840 -3.895 0.549 1GL 1 O5 polymer 1 1 9 ? ? ?
PRD_001136 C7 C7 C 0 1 N N N -5.657 27.974 55.314 -6.702 -5.622 -0.702 1GL 1 C6 polymer 1 1 10 ? ? ?
PRD_001136 O4 O4 O 0 1 N N N -5.174 24.439 61.588 -6.203 1.131 -0.096 2GL 2 O5 polymer 1 1 11 ? ? ?
PRD_001136 C8 C8 C 0 1 N N R -5.321 24.085 60.205 -5.778 -0.095 0.502 2GL 2 C1 polymer 1 1 12 ? ? ?
PRD_001136 C9 C9 C 0 1 N N N -6.256 25.011 59.542 -6.985 -1.018 0.685 2GL 2 C2 polymer 1 1 13 ? ? ?
PRD_001136 C10 C10 C 0 1 N N R -5.839 26.456 59.680 -7.648 -1.255 -0.676 2GL 2 C3 polymer 1 1 14 ? ? ?
PRD_001136 O5 O5 O 0 1 N N N -6.940 27.277 59.246 -8.818 -2.056 -0.504 2GL 2 O3 polymer 1 1 15 ? ? ?
PRD_001136 C11 C11 C 0 1 N N R -5.442 26.759 61.139 -8.036 0.096 -1.284 2GL 2 C4 polymer 1 1 16 ? ? ?
PRD_001136 O6 O6 O 0 1 N N N -6.690 26.774 61.976 -9.017 0.747 -0.435 2GL 2 O4 polymer 1 1 17 ? ? ?
PRD_001136 C12 C12 C 0 1 N N N -8.289 27.747 63.358 -10.948 2.270 -0.218 2GL 2 CME polymer 1 1 18 ? ? ?
PRD_001136 C13 C13 C 0 1 N N N -7.171 27.893 62.517 -9.900 1.560 -1.036 2GL 2 CO4 polymer 1 1 19 ? ? ?
PRD_001136 O7 O7 O 0 1 N N N -6.583 28.957 62.249 -9.854 1.723 -2.232 2GL 2 OC4 polymer 1 1 20 ? ? ?
PRD_001136 C14 C14 C 0 1 N N R -4.554 25.713 61.709 -6.788 0.976 -1.391 2GL 2 C5 polymer 1 1 21 ? ? ?
PRD_001136 C15 C15 C 0 1 N N N -4.190 25.877 63.175 -7.177 2.349 -1.942 2GL 2 C6 polymer 1 1 22 ? ? ?
PRD_001136 C16 C16 C 0 1 N N N -0.792 17.340 62.783 1.278 4.358 0.598 CPH 3 C1 polymer 1 1 23 ? ? ?
PRD_001136 O8 O8 O 0 1 N N N -0.739 16.239 62.220 1.732 4.813 1.628 CPH 3 O1 polymer 1 1 24 ? ? ?
PRD_001136 C17 C17 C 0 1 N N S 0.107 17.476 63.975 1.970 4.585 -0.729 CPH 3 C2 polymer 1 1 25 ? ? ?
PRD_001136 C18 C18 C 0 1 N N R 0.733 18.837 64.034 0.886 4.918 -1.762 CPH 3 C3 polymer 1 1 26 ? ? ?
PRD_001136 C19 C19 C 0 1 N N N -0.342 19.935 64.043 -0.031 3.710 -1.940 CPH 3 C4 polymer 1 1 27 ? ? ?
PRD_001136 C20 C20 C 0 1 Y N N -3.926 21.855 61.284 -3.501 1.333 0.588 CPH 3 C5 polymer 1 1 28 ? ? ?
PRD_001136 C21 C21 C 0 1 Y N N -4.970 21.717 60.438 -4.039 0.899 1.781 CPH 3 C6 polymer 1 1 29 ? ? ?
PRD_001136 C22 C22 C 0 1 Y N N -5.387 20.493 59.864 -3.416 1.195 2.995 CPH 3 C7 polymer 1 1 30 ? ? ?
PRD_001136 C23 C23 C 0 1 Y N N -4.617 19.356 60.187 -2.243 1.918 3.028 CPH 3 C8 polymer 1 1 31 ? ? ?
PRD_001136 O9 O9 O 0 1 N N N -4.929 18.198 59.628 -1.647 2.199 4.214 CPH 3 O8 polymer 1 1 32 ? ? ?
PRD_001136 C24 C24 C 0 1 Y N N -2.630 18.339 61.370 -0.490 3.129 1.816 CPH 3 C9 polymer 1 1 33 ? ? ?
PRD_001136 O10 O10 O 0 1 N N N -2.900 17.185 60.732 0.129 3.435 2.980 CPH 3 O9 polymer 1 1 34 ? ? ?
PRD_001136 C25 C25 C 0 1 N N S 1.711 19.035 65.254 0.065 6.113 -1.273 CPH 3 "C1'" polymer 1 1 35 ? ? ?
PRD_001136 O11 O11 O 0 1 N N N 0.860 19.066 66.407 -1.027 6.338 -2.167 CPH 3 "O1'" polymer 1 1 36 ? ? ?
PRD_001136 C26 C26 C 0 1 Y N N -2.119 20.851 62.586 -1.748 2.533 -0.622 CPH 3 C10 polymer 1 1 37 ? ? ?
PRD_001136 C27 C27 C 0 1 N N N 2.533 20.225 65.108 0.940 7.339 -1.231 CPH 3 "C2'" polymer 1 1 38 ? ? ?
PRD_001136 O12 O12 O 0 1 N N N 3.178 20.410 64.089 0.983 8.084 -2.181 CPH 3 "O2'" polymer 1 1 39 ? ? ?
PRD_001136 C28 C28 C 0 1 N N S 2.621 21.255 66.248 1.762 7.636 -0.003 CPH 3 "C3'" polymer 1 1 40 ? ? ?
PRD_001136 O13 O13 O 0 1 N N N 3.861 22.006 66.088 2.799 8.562 -0.336 CPH 3 "O3'" polymer 1 1 41 ? ? ?
PRD_001136 C29 C29 C 0 1 N N R 1.386 22.116 66.348 0.864 8.243 1.077 CPH 3 "C4'" polymer 1 1 42 ? ? ?
PRD_001136 O14 O14 O 0 1 N N N 1.283 22.802 65.053 0.193 9.389 0.550 CPH 3 "O4'" polymer 1 1 43 ? ? ?
PRD_001136 C30 C30 C 0 1 Y N N -1.399 19.758 62.984 -0.598 3.257 -0.621 CPH 3 C4A polymer 1 1 44 ? ? ?
PRD_001136 C31 C31 C 0 1 N N N 1.544 23.021 67.509 1.719 8.659 2.276 CPH 3 "C5'" polymer 1 1 45 ? ? ?
PRD_001136 C32 C32 C 0 1 Y N N -3.172 20.767 61.667 -2.315 2.081 0.586 CPH 3 C5A polymer 1 1 46 ? ? ?
PRD_001136 C33 C33 C 0 1 Y N N -3.442 19.450 61.061 -1.675 2.373 1.820 CPH 3 C8A polymer 1 1 47 ? ? ?
PRD_001136 C34 C34 C 0 1 Y N N -1.608 18.449 62.325 0.044 3.563 0.598 CPH 3 C9A polymer 1 1 48 ? ? ?
PRD_001136 C35 C35 C 0 1 N N N -6.587 20.381 58.985 -4.026 0.709 4.284 CPH 3 CC7 polymer 1 1 49 ? ? ?
PRD_001136 O15 O15 O 0 1 N N N -5.792 22.785 60.074 -5.188 0.175 1.775 CPH 3 O6 polymer 1 1 50 ? ? ?
PRD_001136 O16 O16 O 0 1 N N N 1.134 16.516 63.981 2.668 3.401 -1.122 CPH 3 O2 polymer 1 1 51 ? ? ?
PRD_001136 C36 C36 C 0 1 N N N 1.338 18.177 67.501 -2.311 6.285 -1.541 CPH 3 CME polymer 1 1 52 ? ? ?
PRD_001136 C37 C37 C 0 1 N N R 0.798 15.172 64.420 4.017 3.340 -0.655 DDA 4 C1 polymer 1 1 53 ? ? ?
PRD_001136 C38 C38 C 0 1 N N N 1.902 14.265 63.992 4.624 1.984 -1.025 DDA 4 C2 polymer 1 1 54 ? ? ?
PRD_001136 C39 C39 C 0 1 N N R 1.728 12.877 64.600 6.088 1.948 -0.574 DDA 4 C3 polymer 1 1 55 ? ? ?
PRD_001136 C40 C40 C 0 1 N N S 1.476 13.002 66.054 6.838 3.117 -1.220 DDA 4 C4 polymer 1 1 56 ? ? ?
PRD_001136 C41 C41 C 0 1 N N R 0.336 13.965 66.332 6.145 4.429 -0.842 DDA 4 C5 polymer 1 1 57 ? ? ?
PRD_001136 C42 C42 C 0 1 N N N 0.061 14.145 67.818 6.853 5.597 -1.532 DDA 4 C6 polymer 1 1 58 ? ? ?
PRD_001136 O17 O17 O 0 1 N N N 0.698 15.243 65.824 4.780 4.384 -1.262 DDA 4 O5 polymer 1 1 59 ? ? ?
PRD_001136 O18 O18 O 0 1 N N N 2.944 12.204 64.277 6.684 0.715 -0.981 DDA 4 O3 polymer 1 1 60 ? ? ?
PRD_001136 O19 O19 O 0 1 N N N 1.099 11.724 66.610 8.187 3.137 -0.749 DDA 4 O4 polymer 1 1 61 ? ? ?
PRD_001136 C43 C43 C 0 1 N N R 2.873 10.853 63.942 6.565 -0.334 -0.017 DDA 5 C1 polymer 1 1 62 ? ? ?
PRD_001136 C44 C44 C 0 1 N N N 4.095 10.410 63.224 7.123 -1.633 -0.605 DDA 5 C2 polymer 1 1 63 ? ? ?
PRD_001136 C45 C45 C 0 1 N N R 4.179 8.954 62.988 7.047 -2.737 0.454 DDA 5 C3 polymer 1 1 64 ? ? ?
PRD_001136 C46 C46 C 0 1 N N S 3.957 8.185 64.285 7.814 -2.286 1.702 DDA 5 C4 polymer 1 1 65 ? ? ?
PRD_001136 C47 C47 C 0 1 N N R 2.696 8.696 64.957 7.229 -0.962 2.200 DDA 5 C5 polymer 1 1 66 ? ? ?
PRD_001136 C48 C48 C 0 1 N N N 2.549 8.112 66.320 8.028 -0.475 3.410 DDA 5 C6 polymer 1 1 67 ? ? ?
PRD_001136 O20 O20 O 0 1 N N N 2.779 10.110 65.190 7.302 0.012 1.157 DDA 5 O5 polymer 1 1 68 ? ? ?
PRD_001136 O21 O21 O 0 1 N N N 5.499 8.652 62.467 7.633 -3.934 -0.060 DDA 5 O3 polymer 1 1 69 ? ? ?
PRD_001136 O22 O22 O 0 1 N N N 3.889 6.779 64.024 7.689 -3.278 2.723 DDA 5 O4 polymer 1 1 70 ? ? ?
PRD_001136 C49 C49 C 0 1 N N R 5.587 8.547 61.083 6.709 -4.789 -0.737 ERI 6 C1 polymer 1 1 71 ? ? ?
PRD_001136 C50 C50 C 0 1 N N N 6.973 9.020 60.596 7.463 -5.971 -1.351 ERI 6 C2 polymer 1 1 72 ? ? ?
PRD_001136 C51 C51 C 0 1 N N S 8.022 7.984 60.929 6.460 -6.914 -2.022 ERI 6 C3 polymer 1 1 73 ? ? ?
PRD_001136 O23 O23 O 0 1 N N N 9.158 8.412 60.126 5.803 -6.231 -3.091 ERI 6 O3 polymer 1 1 74 ? ? ?
PRD_001136 C52 C52 C 0 1 N N N 8.515 7.966 62.424 7.196 -8.137 -2.572 ERI 6 CC3 polymer 1 1 75 ? ? ?
PRD_001136 C53 C53 C 0 1 N N S 7.557 6.662 60.445 5.424 -7.360 -0.985 ERI 6 C4 polymer 1 1 76 ? ? ?
PRD_001136 O24 O24 O 0 1 N N N 8.585 5.694 60.839 6.083 -8.112 0.068 ERI 6 O4 polymer 1 1 77 ? ? ?
PRD_001136 C54 C54 C 0 1 N N N 10.112 3.897 60.396 5.979 -9.885 1.783 ERI 6 CME polymer 1 1 78 ? ? ?
PRD_001136 C55 C55 C 0 1 N N N 9.066 4.841 59.922 5.362 -9.064 0.680 ERI 6 CO4 polymer 1 1 79 ? ? ?
PRD_001136 O25 O25 O 0 1 N N N 8.759 4.971 58.769 4.217 -9.262 0.348 ERI 6 OC4 polymer 1 1 80 ? ? ?
PRD_001136 C56 C56 C 0 1 N N S 6.284 6.257 60.936 4.748 -6.124 -0.385 ERI 6 C5 polymer 1 1 81 ? ? ?
PRD_001136 O26 O26 O 0 1 N N N 5.258 7.204 60.652 5.741 -5.275 0.195 ERI 6 O5 polymer 1 1 82 ? ? ?
PRD_001136 C57 C57 C 0 1 N N N 5.725 4.935 60.402 4.006 -5.364 -1.486 ERI 6 C6 polymer 1 1 83 ? ? ?
PRD_001136 H1 H1 H 0 1 N N N -5.972 29.084 59.583 -8.008 -3.676 -1.499 1GL 1 H1 polymer 1 1 84 ? ? ?
PRD_001136 H2 H2 H 0 1 N N N -8.445 29.123 59.604 -10.505 -3.960 0.236 1GL 1 H21 polymer 1 1 85 ? ? ?
PRD_001136 H3 H3 H 0 1 N N N -7.653 30.360 58.569 -10.463 -3.909 -1.544 1GL 1 H22 polymer 1 1 86 ? ? ?
PRD_001136 H4 H4 H 0 1 N N N -8.983 27.796 57.709 -10.601 -6.250 -0.667 1GL 1 H3 polymer 1 1 87 ? ? ?
PRD_001136 H5 H5 H 0 1 N N N -10.382 29.270 56.607 -9.405 -5.818 -2.692 1GL 1 HO3 polymer 1 1 88 ? ? ?
PRD_001136 H6 H6 H 0 1 N N N -8.479 28.402 55.471 -9.384 -5.899 1.447 1GL 1 H4 polymer 1 1 89 ? ? ?
PRD_001136 H7 H7 H 0 0 N N N -7.682 31.708 54.630 -9.288 -8.022 2.315 1GL 1 HM41 polymer 1 1 90 ? ? ?
PRD_001136 H8 H8 H 0 0 N N N -7.743 30.068 53.900 -8.120 -9.172 1.624 1GL 1 HM42 polymer 1 1 91 ? ? ?
PRD_001136 H9 H9 H 0 0 N N N -9.153 30.695 54.818 -7.552 -7.630 2.306 1GL 1 HM43 polymer 1 1 92 ? ? ?
PRD_001136 H10 H10 H 0 1 N N N -6.928 26.945 56.662 -6.944 -5.531 1.437 1GL 1 H5 polymer 1 1 93 ? ? ?
PRD_001136 H11 H11 H 0 1 N N N -4.804 27.324 55.558 -7.220 -5.251 -1.587 1GL 1 H61 polymer 1 1 94 ? ? ?
PRD_001136 H12 H12 H 0 1 N N N -6.159 27.597 54.411 -5.722 -5.150 -0.629 1GL 1 H62 polymer 1 1 95 ? ? ?
PRD_001136 H13 H13 H 0 1 N N N -5.298 28.998 55.133 -6.581 -6.702 -0.778 1GL 1 H63 polymer 1 1 96 ? ? ?
PRD_001136 H14 H14 H 0 1 N N N -4.342 24.171 59.711 -5.044 -0.579 -0.143 2GL 2 H1 polymer 1 1 97 ? ? ?
PRD_001136 H15 H15 H 0 1 N N N -6.303 24.759 58.472 -6.656 -1.971 1.100 2GL 2 H21 polymer 1 1 98 ? ? ?
PRD_001136 H16 H16 H 0 1 N N N -7.252 24.887 59.992 -7.701 -0.553 1.362 2GL 2 H22 polymer 1 1 99 ? ? ?
PRD_001136 H17 H17 H 0 1 N N N -4.965 26.636 59.037 -6.949 -1.767 -1.337 2GL 2 H3 polymer 1 1 100 ? ? ?
PRD_001136 H18 H18 H 0 1 N N N -4.948 27.741 61.186 -8.459 -0.059 -2.276 2GL 2 H4 polymer 1 1 101 ? ? ?
PRD_001136 H19 H19 H 0 0 N N N -8.579 28.730 63.757 -10.560 3.234 0.112 2GL 2 HM41 polymer 1 1 102 ? ? ?
PRD_001136 H20 H20 H 0 0 N N N -9.126 27.322 62.785 -11.839 2.426 -0.826 2GL 2 HM42 polymer 1 1 103 ? ? ?
PRD_001136 H21 H21 H 0 0 N N N -8.036 27.074 64.191 -11.203 1.664 0.651 2GL 2 HM43 polymer 1 1 104 ? ? ?
PRD_001136 H22 H22 H 0 1 N N N -3.618 25.709 61.132 -6.068 0.507 -2.061 2GL 2 H5 polymer 1 1 105 ? ? ?
PRD_001136 H23 H23 H 0 1 N N N -3.534 25.050 63.485 -7.897 2.819 -1.271 2GL 2 H61 polymer 1 1 106 ? ? ?
PRD_001136 H24 H24 H 0 1 N N N -3.667 26.834 63.318 -6.289 2.976 -2.018 2GL 2 H62 polymer 1 1 107 ? ? ?
PRD_001136 H25 H25 H 0 1 N N N -5.106 25.866 63.784 -7.624 2.231 -2.929 2GL 2 H63 polymer 1 1 108 ? ? ?
PRD_001136 H26 H26 H 0 1 N N N -0.509 17.349 64.878 2.670 5.416 -0.645 CPH 3 H2 polymer 1 1 109 ? ? ?
PRD_001136 H27 H27 H 0 1 N N N 1.331 18.971 63.120 1.354 5.162 -2.715 CPH 3 H3 polymer 1 1 110 ? ? ?
PRD_001136 H28 H28 H 0 1 N N N -0.833 19.932 65.027 -0.849 3.978 -2.608 CPH 3 H4 polymer 1 1 111 ? ? ?
PRD_001136 H29 H29 H 0 1 N N N 0.151 20.905 63.882 0.538 2.892 -2.383 CPH 3 H4A polymer 1 1 112 ? ? ?
PRD_001136 H30 H30 H 0 1 N N N -3.678 22.834 61.667 -3.993 1.097 -0.345 CPH 3 H5 polymer 1 1 113 ? ? ?
PRD_001136 H31 H31 H 0 1 N N N -4.331 17.526 59.935 -1.011 1.530 4.503 CPH 3 HO8 polymer 1 1 114 ? ? ?
PRD_001136 H32 H32 H 0 1 N N N -2.286 16.516 61.013 -0.165 4.267 3.376 CPH 3 HO9 polymer 1 1 115 ? ? ?
PRD_001136 H33 H33 H 0 1 N N N 2.363 18.150 65.304 -0.319 5.906 -0.275 CPH 3 "H1'" polymer 1 1 116 ? ? ?
PRD_001136 H34 H34 H 0 1 N N N -1.865 21.817 62.997 -2.233 2.301 -1.559 CPH 3 H10 polymer 1 1 117 ? ? ?
PRD_001136 H35 H35 H 0 1 N N N 2.694 20.685 67.186 2.205 6.713 0.370 CPH 3 "H3'" polymer 1 1 118 ? ? ?
PRD_001136 H36 H36 H 0 0 N N N 4.253 21.796 65.248 2.476 9.408 -0.675 CPH 3 "HO3'" polymer 1 1 119 ? ? ?
PRD_001136 H37 H37 H 0 1 N N N 0.507 21.472 66.499 0.128 7.504 1.395 CPH 3 "H4'" polymer 1 1 120 ? ? ?
PRD_001136 H38 H38 H 0 0 N N N 0.518 23.365 65.052 0.788 10.088 0.247 CPH 3 "HO4'" polymer 1 1 121 ? ? ?
PRD_001136 H39 H39 H 0 1 N N N 0.653 23.659 67.601 2.455 9.397 1.959 CPH 3 "H5'" polymer 1 1 122 ? ? ?
PRD_001136 H40 H40 H 0 0 N N N 1.664 22.424 68.425 1.079 9.091 3.046 CPH 3 "H5'A" polymer 1 1 123 ? ? ?
PRD_001136 H41 H41 H 0 0 N N N 2.433 23.652 67.364 2.231 7.785 2.678 CPH 3 "H5'B" polymer 1 1 124 ? ? ?
PRD_001136 H42 H42 H 0 1 N N N -6.289 20.530 57.937 -3.626 -0.276 4.527 CPH 3 HC7 polymer 1 1 125 ? ? ?
PRD_001136 H43 H43 H 0 0 N N N -7.034 19.383 59.101 -3.784 1.406 5.086 CPH 3 HC7A polymer 1 1 126 ? ? ?
PRD_001136 H44 H44 H 0 0 N N N -7.323 21.147 59.270 -5.108 0.644 4.173 CPH 3 HC7B polymer 1 1 127 ? ? ?
PRD_001136 H45 H45 H 0 1 N N N 0.648 18.242 68.355 -3.088 6.395 -2.297 CPH 3 HME polymer 1 1 128 ? ? ?
PRD_001136 H46 H46 H 0 0 N N N 1.376 17.139 67.139 -2.429 5.327 -1.035 CPH 3 HMEA polymer 1 1 129 ? ? ?
PRD_001136 H47 H47 H 0 0 N N N 2.343 18.492 67.817 -2.394 7.092 -0.813 CPH 3 HMEB polymer 1 1 130 ? ? ?
PRD_001136 H48 H48 H 0 1 N N N -0.151 14.846 63.970 4.032 3.461 0.428 DDA 4 H1 polymer 1 1 131 ? ? ?
PRD_001136 H49 H49 H 0 1 N N N 1.896 14.182 62.895 4.070 1.188 -0.527 DDA 4 H21 polymer 1 1 132 ? ? ?
PRD_001136 H50 H50 H 0 1 N N N 2.863 14.686 64.322 4.573 1.844 -2.105 DDA 4 H22 polymer 1 1 133 ? ? ?
PRD_001136 H51 H51 H 0 1 N N N 0.874 12.379 64.118 6.137 2.038 0.511 DDA 4 H3 polymer 1 1 134 ? ? ?
PRD_001136 H52 H52 H 0 1 N N N 2.384 13.373 66.551 6.831 3.000 -2.303 DDA 4 H4 polymer 1 1 135 ? ? ?
PRD_001136 H53 H53 H 0 1 N N N -0.576 13.598 65.838 6.189 4.565 0.239 DDA 4 H5 polymer 1 1 136 ? ? ?
PRD_001136 H54 H54 H 0 1 N N N -0.772 14.851 67.954 6.809 5.461 -2.613 DDA 4 H61 polymer 1 1 137 ? ? ?
PRD_001136 H55 H55 H 0 1 N N N -0.205 13.174 68.262 6.360 6.531 -1.263 DDA 4 H62 polymer 1 1 138 ? ? ?
PRD_001136 H56 H56 H 0 1 N N N 0.961 14.540 68.312 7.895 5.631 -1.212 DDA 4 H63 polymer 1 1 139 ? ? ?
PRD_001136 H57 H57 H 0 1 N N N 0.940 11.818 67.542 8.722 3.853 -1.118 DDA 4 HO4 polymer 1 1 140 ? ? ?
PRD_001136 H58 H58 H 0 1 N N N 1.989 10.651 63.319 5.515 -0.473 0.241 DDA 5 H1 polymer 1 1 141 ? ? ?
PRD_001136 H59 H59 H 0 1 N N N 4.122 10.917 62.248 6.533 -1.922 -1.475 DDA 5 H21 polymer 1 1 142 ? ? ?
PRD_001136 H60 H60 H 0 1 N N N 4.970 10.712 63.818 8.161 -1.482 -0.900 DDA 5 H22 polymer 1 1 143 ? ? ?
PRD_001136 H61 H61 H 0 1 N N N 3.411 8.654 62.260 6.005 -2.922 0.715 DDA 5 H3 polymer 1 1 144 ? ? ?
PRD_001136 H62 H62 H 0 1 N N N 4.807 8.389 64.952 8.866 -2.149 1.452 DDA 5 H4 polymer 1 1 145 ? ? ?
PRD_001136 H63 H63 H 0 1 N N N 1.819 8.449 64.341 6.188 -1.109 2.487 DDA 5 H5 polymer 1 1 146 ? ? ?
PRD_001136 H64 H64 H 0 1 N N N 1.630 8.496 66.787 9.069 -0.326 3.122 DDA 5 H61 polymer 1 1 147 ? ? ?
PRD_001136 H65 H65 H 0 1 N N N 2.492 7.016 66.245 7.612 0.468 3.765 DDA 5 H62 polymer 1 1 148 ? ? ?
PRD_001136 H66 H66 H 0 1 N N N 3.417 8.393 66.935 7.973 -1.218 4.205 DDA 5 H63 polymer 1 1 149 ? ? ?
PRD_001136 H67 H67 H 0 1 N N N 3.751 6.311 64.839 8.152 -3.057 3.543 DDA 5 HO4 polymer 1 1 150 ? ? ?
PRD_001136 H68 H68 H 0 1 N N N 4.849 9.230 60.636 6.206 -4.229 -1.525 ERI 6 H1 polymer 1 1 151 ? ? ?
PRD_001136 H69 H69 H 0 1 N N N 6.944 9.171 59.507 8.172 -5.605 -2.094 ERI 6 H21 polymer 1 1 152 ? ? ?
PRD_001136 H70 H70 H 0 1 N N N 7.228 9.969 61.091 8.000 -6.508 -0.568 ERI 6 H22 polymer 1 1 153 ? ? ?
PRD_001136 H71 H71 H 0 1 N N N 9.886 7.817 60.264 6.401 -5.913 -3.781 ERI 6 HO3 polymer 1 1 154 ? ? ?
PRD_001136 H72 H72 H 0 1 N N N 9.272 7.178 62.551 7.694 -8.660 -1.755 ERI 6 H31 polymer 1 1 155 ? ? ?
PRD_001136 H73 H73 H 0 1 N N N 8.955 8.942 62.677 6.480 -8.807 -3.049 ERI 6 H32 polymer 1 1 156 ? ? ?
PRD_001136 H74 H74 H 0 1 N N N 7.662 7.765 63.089 7.937 -7.817 -3.304 ERI 6 H33 polymer 1 1 157 ? ? ?
PRD_001136 H75 H75 H 0 1 N N N 7.519 6.696 59.346 4.674 -7.989 -1.467 ERI 6 H4 polymer 1 1 158 ? ? ?
PRD_001136 H76 H76 H 0 1 N N N 10.538 3.359 59.536 5.808 -9.394 2.741 ERI 6 H41 polymer 1 1 159 ? ? ?
PRD_001136 H77 H77 H 0 1 N N N 10.907 4.458 60.908 5.525 -10.876 1.796 ERI 6 H42 polymer 1 1 160 ? ? ?
PRD_001136 H78 H78 H 0 1 N N N 9.664 3.175 61.095 7.051 -9.979 1.609 ERI 6 H43 polymer 1 1 161 ? ? ?
PRD_001136 H79 H79 H 0 1 N N N 6.358 6.152 62.028 4.041 -6.434 0.384 ERI 6 H5 polymer 1 1 162 ? ? ?
PRD_001136 H80 H80 H 0 1 N N N 4.743 4.741 60.858 3.350 -6.049 -2.022 ERI 6 H61 polymer 1 1 163 ? ? ?
PRD_001136 H81 H81 H 0 1 N N N 5.616 4.998 59.309 3.412 -4.566 -1.039 ERI 6 H62 polymer 1 1 164 ? ? ?
PRD_001136 H82 H82 H 0 1 N N N 6.415 4.117 60.655 4.728 -4.934 -2.180 ERI 6 H63 polymer 1 1 165 ? ? ?
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PRD_001136 C1 C2 SING N N 1
PRD_001136 C1 O3 SING N N 2
PRD_001136 C1 H1 SING N N 3
PRD_001136 C2 C3 SING N N 4
PRD_001136 C2 H2 SING N N 5
PRD_001136 C2 H3 SING N N 6
PRD_001136 C3 O1 SING N N 7
PRD_001136 C3 C4 SING N N 8
PRD_001136 C3 H4 SING N N 9
PRD_001136 O1 H5 SING N N 10
PRD_001136 C4 O2 SING N N 11
PRD_001136 C4 C6 SING N N 12
PRD_001136 C4 H6 SING N N 13
PRD_001136 O2 C5 SING N N 14
PRD_001136 C5 H7 SING N N 15
PRD_001136 C5 H8 SING N N 16
PRD_001136 C5 H9 SING N N 17
PRD_001136 C6 O3 SING N N 18
PRD_001136 C6 C7 SING N N 19
PRD_001136 C6 H10 SING N N 20
PRD_001136 C7 H11 SING N N 21
PRD_001136 C7 H12 SING N N 22
PRD_001136 C7 H13 SING N N 23
PRD_001136 O4 C8 SING N N 24
PRD_001136 C8 C9 SING N N 25
PRD_001136 C8 H14 SING N N 26
PRD_001136 C9 C10 SING N N 27
PRD_001136 C9 H15 SING N N 28
PRD_001136 C9 H16 SING N N 29
PRD_001136 C10 O5 SING N N 30
PRD_001136 C10 C11 SING N N 31
PRD_001136 C10 H17 SING N N 32
PRD_001136 C11 O6 SING N N 33
PRD_001136 C11 C14 SING N N 34
PRD_001136 C11 H18 SING N N 35
PRD_001136 O6 C13 SING N N 36
PRD_001136 C12 C13 SING N N 37
PRD_001136 C12 H19 SING N N 38
PRD_001136 C12 H20 SING N N 39
PRD_001136 C12 H21 SING N N 40
PRD_001136 C13 O7 DOUB N N 41
PRD_001136 C14 O4 SING N N 42
PRD_001136 C14 C15 SING N N 43
PRD_001136 C14 H22 SING N N 44
PRD_001136 C15 H23 SING N N 45
PRD_001136 C15 H24 SING N N 46
PRD_001136 C15 H25 SING N N 47
PRD_001136 O8 C16 DOUB N N 48
PRD_001136 C34 C16 SING N N 49
PRD_001136 C16 C17 SING N N 50
PRD_001136 C17 O16 SING N N 51
PRD_001136 C17 C18 SING N N 52
PRD_001136 C17 H26 SING N N 53
PRD_001136 C18 C19 SING N N 54
PRD_001136 C18 C25 SING N N 55
PRD_001136 C18 H27 SING N N 56
PRD_001136 C30 C19 SING N N 57
PRD_001136 C19 H28 SING N N 58
PRD_001136 C19 H29 SING N N 59
PRD_001136 C21 C20 DOUB Y N 60
PRD_001136 C20 C32 SING Y N 61
PRD_001136 C20 H30 SING N N 62
PRD_001136 C22 C21 SING Y N 63
PRD_001136 O15 C21 SING N N 64
PRD_001136 C35 C22 SING N N 65
PRD_001136 C22 C23 DOUB Y N 66
PRD_001136 O9 C23 SING N N 67
PRD_001136 C23 C33 SING Y N 68
PRD_001136 O9 H31 SING N N 69
PRD_001136 O10 C24 SING N N 70
PRD_001136 C33 C24 DOUB Y N 71
PRD_001136 C24 C34 SING Y N 72
PRD_001136 O10 H32 SING N N 73
PRD_001136 C27 C25 SING N N 74
PRD_001136 C25 O11 SING N N 75
PRD_001136 C25 H33 SING N N 76
PRD_001136 O11 C36 SING N N 77
PRD_001136 C32 C26 DOUB Y N 78
PRD_001136 C26 C30 SING Y N 79
PRD_001136 C26 H34 SING N N 80
PRD_001136 O12 C27 DOUB N N 81
PRD_001136 C27 C28 SING N N 82
PRD_001136 O13 C28 SING N N 83
PRD_001136 C28 C29 SING N N 84
PRD_001136 C28 H35 SING N N 85
PRD_001136 O13 H36 SING N N 86
PRD_001136 O14 C29 SING N N 87
PRD_001136 C29 C31 SING N N 88
PRD_001136 C29 H37 SING N N 89
PRD_001136 O14 H38 SING N N 90
PRD_001136 C34 C30 DOUB Y N 91
PRD_001136 C31 H39 SING N N 92
PRD_001136 C31 H40 SING N N 93
PRD_001136 C31 H41 SING N N 94
PRD_001136 C33 C32 SING Y N 95
PRD_001136 C35 H42 SING N N 96
PRD_001136 C35 H43 SING N N 97
PRD_001136 C35 H44 SING N N 98
PRD_001136 C36 H45 SING N N 99
PRD_001136 C36 H46 SING N N 100
PRD_001136 C36 H47 SING N N 101
PRD_001136 C37 C38 SING N N 102
PRD_001136 C37 O17 SING N N 103
PRD_001136 C37 H48 SING N N 104
PRD_001136 C38 C39 SING N N 105
PRD_001136 C38 H49 SING N N 106
PRD_001136 C38 H50 SING N N 107
PRD_001136 C39 C40 SING N N 108
PRD_001136 C39 O18 SING N N 109
PRD_001136 C39 H51 SING N N 110
PRD_001136 C40 C41 SING N N 111
PRD_001136 C40 O19 SING N N 112
PRD_001136 C40 H52 SING N N 113
PRD_001136 C41 C42 SING N N 114
PRD_001136 C41 O17 SING N N 115
PRD_001136 C41 H53 SING N N 116
PRD_001136 C42 H54 SING N N 117
PRD_001136 C42 H55 SING N N 118
PRD_001136 C42 H56 SING N N 119
PRD_001136 O19 H57 SING N N 120
PRD_001136 C43 C44 SING N N 121
PRD_001136 C43 O20 SING N N 122
PRD_001136 C43 H58 SING N N 123
PRD_001136 C44 C45 SING N N 124
PRD_001136 C44 H59 SING N N 125
PRD_001136 C44 H60 SING N N 126
PRD_001136 C45 C46 SING N N 127
PRD_001136 C45 O21 SING N N 128
PRD_001136 C45 H61 SING N N 129
PRD_001136 C46 C47 SING N N 130
PRD_001136 C46 O22 SING N N 131
PRD_001136 C46 H62 SING N N 132
PRD_001136 C47 C48 SING N N 133
PRD_001136 C47 O20 SING N N 134
PRD_001136 C47 H63 SING N N 135
PRD_001136 C48 H64 SING N N 136
PRD_001136 C48 H65 SING N N 137
PRD_001136 C48 H66 SING N N 138
PRD_001136 O22 H67 SING N N 139
PRD_001136 C49 C50 SING N N 140
PRD_001136 C49 O26 SING N N 141
PRD_001136 C49 H68 SING N N 142
PRD_001136 C50 C51 SING N N 143
PRD_001136 C50 H69 SING N N 144
PRD_001136 C50 H70 SING N N 145
PRD_001136 C51 O23 SING N N 146
PRD_001136 C51 C52 SING N N 147
PRD_001136 C51 C53 SING N N 148
PRD_001136 O23 H71 SING N N 149
PRD_001136 C52 H72 SING N N 150
PRD_001136 C52 H73 SING N N 151
PRD_001136 C52 H74 SING N N 152
PRD_001136 C53 O24 SING N N 153
PRD_001136 C53 C56 SING N N 154
PRD_001136 C53 H75 SING N N 155
PRD_001136 O24 C55 SING N N 156
PRD_001136 C54 C55 SING N N 157
PRD_001136 C54 H76 SING N N 158
PRD_001136 C54 H77 SING N N 159
PRD_001136 C54 H78 SING N N 160
PRD_001136 C55 O25 DOUB N N 161
PRD_001136 C56 O26 SING N N 162
PRD_001136 C56 C57 SING N N 163
PRD_001136 C56 H79 SING N N 164
PRD_001136 C57 H80 SING N N 165
PRD_001136 C57 H81 SING N N 166
PRD_001136 C57 H82 SING N N 167
PRD_001136 C1 O5 SING N N 168
PRD_001136 C8 O15 SING N N 169
PRD_001136 O16 C37 SING N N 170
PRD_001136 O18 C43 SING N N 171
PRD_001136 O21 C49 SING N N 172
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PRD_001136 SMILES ACDLabs 12.01 "O=C(OC1C(O)(C)CC(OC1C)OC2CC(OC(C)C2O)OC3CC(OC(C)C3O)OC8C(=O)c7c(cc6cc(OC5OC(C(OC(=O)C)C(OC4OC(C(OC)C(O)C4)C)C5)C)c(c(O)c6c7O)C)CC8C(OC)C(=O)C(O)C(O)C)C"
PRD_001136 InChI InChI 1.03 "InChI=1S/C57H82O26/c1-21-34(79-40-19-37(53(26(6)75-40)77-28(8)59)82-38-16-33(61)52(70-11)25(5)74-38)15-31-13-30-14-32(54(71-12)51(68)46(63)22(2)58)55(50(67)44(30)49(66)43(31)45(21)62)83-41-18-35(47(64)24(4)73-41)80-39-17-36(48(65)23(3)72-39)81-42-20-57(10,69)56(27(7)76-42)78-29(9)60/h13,15,22-27,32-33,35-42,46-48,52-56,58,61-66,69H,14,16-20H2,1-12H3/t22?,23?,24?,25?,26?,27?,32?,33?,35?,36?,37?,38?,39?,40?,41?,42?,46?,47?,48?,52?,53?,54?,55?,56?,57-/m0/s1"
PRD_001136 InChIKey InChI 1.03 ZYVSOIYQKUDENJ-YFPVUNPNSA-N
PRD_001136 SMILES_CANONICAL CACTVS 3.385 "CO[C@@H]1[C@H](O)C[C@H](O[C@@H]1C)O[C@@H]2C[C@@H](O[C@H](C)[C@@H]2OC(C)=O)Oc3cc4cc5C[C@@H]([C@H](OC)C(=O)[C@@H](O)[C@@H](C)O)[C@H](O[C@H]6C[C@@H](O[C@H]7C[C@@H](O[C@H]8C[C@](C)(O)[C@@H](OC(C)=O)[C@H](C)O8)[C@H](O)[C@@H](C)O7)[C@H](O)[C@@H](C)O6)C(=O)c5c(O)c4c(O)c3C"
PRD_001136 SMILES CACTVS 3.385 "CO[CH]1[CH](O)C[CH](O[CH]1C)O[CH]2C[CH](O[CH](C)[CH]2OC(C)=O)Oc3cc4cc5C[CH]([CH](OC)C(=O)[CH](O)[CH](C)O)[CH](O[CH]6C[CH](O[CH]7C[CH](O[CH]8C[C](C)(O)[CH](OC(C)=O)[CH](C)O8)[CH](O)[CH](C)O7)[CH](O)[CH](C)O6)C(=O)c5c(O)c4c(O)c3C"
PRD_001136 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(cc2cc3c(c(c2c1O)O)C(=O)[C@H]([C@@H](C3)[C@@H](C(=O)[C@H]([C@@H](C)O)O)OC)O[C@H]4C[C@H]([C@@H]([C@H](O4)C)O)O[C@H]5C[C@H]([C@@H]([C@H](O5)C)O)O[C@H]6C[C@]([C@H]([C@@H](O6)C)OC(=O)C)(C)O)OC7C[C@H]([C@H]([C@H](O7)C)OC(=O)C)O[C@H]8C[C@H]([C@H]([C@H](O8)C)OC)O"
PRD_001136 SMILES "OpenEye OEToolkits" 1.7.6 "Cc1c(cc2cc3c(c(c2c1O)O)C(=O)C(C(C3)C(C(=O)C(C(C)O)O)OC)OC4CC(C(C(O4)C)O)OC5CC(C(C(O5)C)O)OC6CC(C(C(O6)C)OC(=O)C)(C)O)OC7CC(C(C(O7)C)OC(=O)C)OC8CC(C(C(O8)C)OC)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PRD_001136 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S)-1-C-[(2S,3R)-7-{[4-O-acetyl-2,6-dideoxy-3-O-(2,6-dideoxy-4-O-methyl-beta-D-lyxo-hexopyranosyl)-beta-D-arabino-hexopyranosyl]oxy}-3-{[4-O-acetyl-2,6-dideoxy-3-C-methyl-beta-D-xylo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl-(1->3)-2,6-dideoxy-beta-D-lyxo-hexopyranosyl]oxy}-5,10-dihydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-5-deoxy-1-O-methyl-D-ribulose"
PRD_001136 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R)-6-[[(6S,7S)-6-[(2S,4R,5R,6R)-4-[(2S,4R,5R,6R)-4-[(2S,4S,5S,6S)-5-acetyloxy-4,6-dimethyl-4-oxidanyl-oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-7-[(1S,3S,4R)-1-methoxy-3,4-bis(oxidanyl)-2-oxidanylidene-pentyl]-3-methyl-4,10-bis(oxidanyl)-5-oxidanylidene-7,8-dihydro-6H-anthracen-2-yl]oxy]-4-[(2S,4R,5R,6R)-5-methoxy-6-methyl-4-oxidanyl-oxan-2-yl]oxy-2-methyl-oxan-3-yl] ethanoate"
#