data_PRDCC_001234 # _chem_comp.id PRD_001234 _chem_comp.name cyclic-tris-leucylselenazole _chem_comp.formula "C27 H36 N6 O3 Se3" _chem_comp.formula_weight 729.493 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_001234 C1 C1 C 0 1 N N N 70.556 0.624 -2.189 -2.620 -2.600 -0.221 30F 1 C polymer 1 1 1 ? ? ? PRD_001234 C2 C2 C 0 1 N N N 70.901 1.101 -3.422 -1.416 -3.449 -0.142 30F 1 CA polymer 1 1 2 ? ? ? PRD_001234 C3 C3 C 0 1 N N N 70.072 1.931 -4.088 -1.586 -4.776 0.101 30F 1 C09 polymer 1 1 3 ? ? ? PRD_001234 O1 O1 O 0 1 N N N 69.605 1.006 -1.549 -3.721 -3.097 -0.091 30F 1 O polymer 1 1 4 ? ? ? PRD_001234 SE1 SE1 SE 0 0 N N N 70.841 2.409 -5.797 0.306 -5.376 0.095 30F 1 SE2 polymer 1 1 5 ? ? ? PRD_001234 N1 N1 N 0 1 N N N 71.993 0.777 -3.992 -0.212 -2.893 -0.317 30F 1 N polymer 1 1 6 ? ? ? PRD_001234 N2 N2 N 0 1 N N N 71.389 -0.366 -1.733 -2.502 -1.261 -0.434 LEU 2 N polymer 1 1 7 ? ? ? PRD_001234 C4 C4 C 0 1 N N S 71.240 -1.053 -0.447 -3.770 -0.516 -0.558 LEU 2 CA polymer 1 1 8 ? ? ? PRD_001234 C5 C5 C 0 1 N N N 72.261 -0.479 0.496 -3.518 0.951 -0.325 LEU 2 C polymer 1 1 9 ? ? ? PRD_001234 C6 C6 C 0 1 N N N 71.443 -2.574 -0.616 -4.768 -1.032 0.481 LEU 2 CB polymer 1 1 10 ? ? ? PRD_001234 C7 C7 C 0 1 N N N 70.586 -3.246 -1.713 -6.110 -0.319 0.297 LEU 2 CG polymer 1 1 11 ? ? ? PRD_001234 C8 C8 C 0 1 N N N 70.835 -4.766 -1.740 -6.699 -0.686 -1.066 LEU 2 CD1 polymer 1 1 12 ? ? ? PRD_001234 C9 C9 C 0 1 N N N 69.083 -2.976 -1.544 -7.074 -0.754 1.403 LEU 2 CD2 polymer 1 1 13 ? ? ? PRD_001234 C10 C10 C 0 1 N N N 75.545 0.665 0.684 -0.947 3.556 -0.154 30F 3 C polymer 1 1 14 ? ? ? PRD_001234 C11 C11 C 0 1 N N N 74.252 0.309 0.979 -2.285 2.936 -0.114 30F 3 CA polymer 1 1 15 ? ? ? PRD_001234 C12 C12 C 0 1 N N N 73.794 0.472 2.238 -3.355 3.739 0.135 30F 3 C09 polymer 1 1 16 ? ? ? PRD_001234 O2 O2 O 0 1 N N N 76.226 1.379 1.385 -0.832 4.754 0.014 30F 3 O polymer 1 1 17 ? ? ? PRD_001234 SE2 SE2 SE 0 0 N N N 71.954 -0.112 2.364 -4.819 2.399 0.069 30F 3 SE2 polymer 1 1 18 ? ? ? PRD_001234 N3 N3 N 0 1 N N N 73.437 -0.179 0.116 -2.401 1.621 -0.326 30F 3 N polymer 1 1 19 ? ? ? PRD_001234 N4 N4 N 0 1 N N N 76.022 0.137 -0.493 0.159 2.796 -0.378 LEU 4 N polymer 1 1 20 ? ? ? PRD_001234 C13 C13 C 0 1 N N S 77.369 0.351 -1.050 1.436 3.533 -0.456 LEU 4 CA polymer 1 1 21 ? ? ? PRD_001234 C14 C14 C 0 1 N N N 77.270 1.440 -2.087 2.587 2.572 -0.321 LEU 4 C polymer 1 1 22 ? ? ? PRD_001234 C15 C15 C 0 1 N N N 77.874 -0.952 -1.706 1.498 4.564 0.673 LEU 4 CB polymer 1 1 23 ? ? ? PRD_001234 C16 C16 C 0 1 N N N 77.943 -2.172 -0.766 2.750 5.428 0.506 LEU 4 CG polymer 1 1 24 ? ? ? PRD_001234 C17 C17 C 0 1 N N N 78.319 -3.441 -1.558 2.652 6.220 -0.800 LEU 4 CD1 polymer 1 1 25 ? ? ? PRD_001234 C18 C18 C 0 1 N N N 78.937 -1.938 0.383 2.861 6.398 1.683 LEU 4 CD2 polymer 1 1 26 ? ? ? PRD_001234 C19 C19 C 0 1 N N N 75.364 2.249 -4.849 3.556 -0.957 -0.251 30F 5 C polymer 1 1 27 ? ? ? PRD_001234 C20 C20 C 0 1 N N N 76.295 2.278 -3.854 3.696 0.507 -0.211 30F 5 CA polymer 1 1 28 ? ? ? PRD_001234 C21 C21 C 0 1 N N N 77.170 3.301 -3.774 4.943 1.026 -0.051 30F 5 C09 polymer 1 1 29 ? ? ? PRD_001234 O3 O3 O 0 1 N N N 75.226 3.113 -5.682 4.547 -1.657 -0.169 30F 5 O polymer 1 1 30 ? ? ? PRD_001234 SE3 SE3 SE 0 0 N N N 78.359 3.034 -2.271 4.518 2.965 -0.070 30F 5 SE2 polymer 1 1 31 ? ? ? PRD_001234 N5 N5 N 0 1 N N N 76.378 1.355 -2.981 2.605 1.271 -0.335 30F 5 N polymer 1 1 32 ? ? ? PRD_001234 N6 N6 N 0 1 N N N 74.587 1.122 -4.844 2.332 -1.536 -0.375 LEU 6 N polymer 1 1 33 ? ? ? PRD_001234 C22 C22 C 0 1 N N S 73.522 0.876 -5.822 2.327 -3.010 -0.464 LEU 6 CA polymer 1 1 34 ? ? ? PRD_001234 C23 C23 C 0 1 N N N 72.239 1.248 -5.138 0.925 -3.526 -0.277 LEU 6 C polymer 1 1 35 ? ? ? PRD_001234 C24 C24 C 0 1 N N N 73.540 -0.599 -6.277 3.232 -3.588 0.627 LEU 6 CB polymer 1 1 36 ? ? ? PRD_001234 C25 C25 C 0 1 N N N 72.408 -1.008 -7.248 3.379 -5.097 0.420 LEU 6 CG polymer 1 1 37 ? ? ? PRD_001234 C26 C26 C 0 1 N N N 72.448 -0.252 -8.589 4.111 -5.362 -0.897 LEU 6 CD1 polymer 1 1 38 ? ? ? PRD_001234 C27 C27 C 0 1 N N N 72.442 -2.527 -7.500 4.181 -5.694 1.578 LEU 6 CD2 polymer 1 1 39 ? ? ? PRD_001234 H1 H1 H 0 1 N N N 69.118 2.278 -3.720 -2.492 -5.343 0.255 30F 1 H13 polymer 1 1 40 ? ? ? PRD_001234 H2 H2 H 0 1 N N N 72.152 -0.638 -2.320 -1.639 -0.824 -0.500 LEU 2 H polymer 1 1 41 ? ? ? PRD_001234 H3 H3 H 0 1 N N N 70.232 -0.874 -0.044 -4.180 -0.660 -1.557 LEU 2 HA polymer 1 1 42 ? ? ? PRD_001234 H4 H4 H 0 1 N N N 72.501 -2.749 -0.859 -4.906 -2.105 0.351 LEU 2 HB2 polymer 1 1 43 ? ? ? PRD_001234 H5 H5 H 0 1 N N N 71.203 -3.056 0.343 -4.386 -0.833 1.482 LEU 2 HB3 polymer 1 1 44 ? ? ? PRD_001234 H6 H6 H 0 1 N N N 70.898 -2.834 -2.684 -5.959 0.759 0.350 LEU 2 HG polymer 1 1 45 ? ? ? PRD_001234 H7 H7 H 0 0 N N N 70.217 -5.225 -2.526 -6.929 -1.752 -1.088 LEU 2 HD11 polymer 1 1 46 ? ? ? PRD_001234 H8 H8 H 0 0 N N N 71.897 -4.960 -1.949 -7.612 -0.114 -1.233 LEU 2 HD12 polymer 1 1 47 ? ? ? PRD_001234 H9 H9 H 0 0 N N N 70.568 -5.198 -0.764 -5.977 -0.454 -1.849 LEU 2 HD13 polymer 1 1 48 ? ? ? PRD_001234 H10 H10 H 0 0 N N N 68.527 -3.477 -2.350 -6.654 -0.493 2.374 LEU 2 HD21 polymer 1 1 49 ? ? ? PRD_001234 H11 H11 H 0 0 N N N 68.748 -3.365 -0.571 -8.030 -0.246 1.272 LEU 2 HD22 polymer 1 1 50 ? ? ? PRD_001234 H12 H12 H 0 0 N N N 68.898 -1.893 -1.590 -7.225 -1.832 1.351 LEU 2 HD23 polymer 1 1 51 ? ? ? PRD_001234 H13 H13 H 0 1 N N N 74.372 0.871 3.058 -3.397 4.802 0.318 30F 3 H13 polymer 1 1 52 ? ? ? PRD_001234 H14 H14 H 0 1 N N N 75.399 -0.444 -1.017 0.112 1.833 -0.480 LEU 4 H polymer 1 1 53 ? ? ? PRD_001234 H15 H15 H 0 1 N N N 78.067 0.654 -0.256 1.501 4.044 -1.417 LEU 4 HA polymer 1 1 54 ? ? ? PRD_001234 H16 H16 H 0 1 N N N 77.197 -1.200 -2.537 0.612 5.197 0.636 LEU 4 HB2 polymer 1 1 55 ? ? ? PRD_001234 H17 H17 H 0 1 N N N 78.885 -0.767 -2.099 1.537 4.049 1.633 LEU 4 HB3 polymer 1 1 56 ? ? ? PRD_001234 H18 H18 H 0 1 N N N 76.945 -2.325 -0.330 3.632 4.788 0.477 LEU 4 HG polymer 1 1 57 ? ? ? PRD_001234 H19 H19 H 0 0 N N N 78.364 -4.301 -0.874 3.579 6.770 -0.961 LEU 4 HD11 polymer 1 1 58 ? ? ? PRD_001234 H20 H20 H 0 0 N N N 77.560 -3.628 -2.332 2.489 5.533 -1.630 LEU 4 HD12 polymer 1 1 59 ? ? ? PRD_001234 H21 H21 H 0 0 N N N 79.301 -3.299 -2.033 1.820 6.920 -0.739 LEU 4 HD13 polymer 1 1 60 ? ? ? PRD_001234 H22 H22 H 0 0 N N N 78.962 -2.825 1.033 2.930 5.834 2.614 LEU 4 HD21 polymer 1 1 61 ? ? ? PRD_001234 H23 H23 H 0 0 N N N 79.940 -1.759 -0.031 3.753 7.013 1.564 LEU 4 HD22 polymer 1 1 62 ? ? ? PRD_001234 H24 H24 H 0 0 N N N 78.620 -1.063 0.969 1.979 7.038 1.712 LEU 4 HD23 polymer 1 1 63 ? ? ? PRD_001234 H25 H25 H 0 1 N N N 77.202 4.144 -4.448 5.894 0.526 0.058 30F 5 H13 polymer 1 1 64 ? ? ? PRD_001234 H26 H26 H 0 1 N N N 74.754 0.433 -4.139 1.514 -1.014 -0.402 LEU 6 H polymer 1 1 65 ? ? ? PRD_001234 H27 H27 H 0 1 N N N 73.667 1.520 -6.702 2.699 -3.316 -1.442 LEU 6 HA polymer 1 1 66 ? ? ? PRD_001234 H28 H28 H 0 1 N N N 74.501 -0.788 -6.778 4.213 -3.116 0.572 LEU 6 HB2 polymer 1 1 67 ? ? ? PRD_001234 H29 H29 H 0 1 N N N 73.463 -1.232 -5.380 2.790 -3.396 1.604 LEU 6 HB3 polymer 1 1 68 ? ? ? PRD_001234 H30 H30 H 0 1 N N N 71.451 -0.772 -6.760 2.392 -5.557 0.387 LEU 6 HG polymer 1 1 69 ? ? ? PRD_001234 H31 H31 H 0 0 N N N 71.619 -0.591 -9.227 3.584 -4.865 -1.712 LEU 6 HD11 polymer 1 1 70 ? ? ? PRD_001234 H32 H32 H 0 0 N N N 72.350 0.828 -8.404 5.128 -4.976 -0.832 LEU 6 HD12 polymer 1 1 71 ? ? ? PRD_001234 H33 H33 H 0 0 N N N 73.404 -0.452 -9.094 4.141 -6.435 -1.086 LEU 6 HD13 polymer 1 1 72 ? ? ? PRD_001234 H34 H34 H 0 0 N N N 71.632 -2.803 -8.192 3.660 -5.504 2.517 LEU 6 HD21 polymer 1 1 73 ? ? ? PRD_001234 H35 H35 H 0 0 N N N 73.411 -2.804 -7.941 4.286 -6.769 1.431 LEU 6 HD22 polymer 1 1 74 ? ? ? PRD_001234 H36 H36 H 0 0 N N N 72.308 -3.060 -6.547 5.169 -5.233 1.612 LEU 6 HD23 polymer 1 1 75 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_001234 SE1 C3 SING N N 1 PRD_001234 C3 C2 DOUB N Z 2 PRD_001234 N1 C2 SING N N 3 PRD_001234 C2 C1 SING N N 4 PRD_001234 C1 O1 DOUB N N 5 PRD_001234 C3 H1 SING N N 6 PRD_001234 N2 C4 SING N N 7 PRD_001234 N2 H2 SING N N 8 PRD_001234 C4 C5 SING N N 9 PRD_001234 C4 C6 SING N N 10 PRD_001234 C4 H3 SING N N 11 PRD_001234 C6 C7 SING N N 12 PRD_001234 C6 H4 SING N N 13 PRD_001234 C6 H5 SING N N 14 PRD_001234 C7 C8 SING N N 15 PRD_001234 C7 C9 SING N N 16 PRD_001234 C7 H6 SING N N 17 PRD_001234 C8 H7 SING N N 18 PRD_001234 C8 H8 SING N N 19 PRD_001234 C8 H9 SING N N 20 PRD_001234 C9 H10 SING N N 21 PRD_001234 C9 H11 SING N N 22 PRD_001234 C9 H12 SING N N 23 PRD_001234 SE2 C12 SING N N 24 PRD_001234 C12 C11 DOUB N Z 25 PRD_001234 N3 C11 SING N N 26 PRD_001234 C11 C10 SING N N 27 PRD_001234 C10 O2 DOUB N N 28 PRD_001234 C12 H13 SING N N 29 PRD_001234 N4 C13 SING N N 30 PRD_001234 N4 H14 SING N N 31 PRD_001234 C13 C14 SING N N 32 PRD_001234 C13 C15 SING N N 33 PRD_001234 C13 H15 SING N N 34 PRD_001234 C15 C16 SING N N 35 PRD_001234 C15 H16 SING N N 36 PRD_001234 C15 H17 SING N N 37 PRD_001234 C16 C17 SING N N 38 PRD_001234 C16 C18 SING N N 39 PRD_001234 C16 H18 SING N N 40 PRD_001234 C17 H19 SING N N 41 PRD_001234 C17 H20 SING N N 42 PRD_001234 C17 H21 SING N N 43 PRD_001234 C18 H22 SING N N 44 PRD_001234 C18 H23 SING N N 45 PRD_001234 C18 H24 SING N N 46 PRD_001234 SE3 C21 SING N N 47 PRD_001234 C21 C20 DOUB N Z 48 PRD_001234 N5 C20 SING N N 49 PRD_001234 C20 C19 SING N N 50 PRD_001234 C19 O3 DOUB N N 51 PRD_001234 C21 H25 SING N N 52 PRD_001234 N6 C22 SING N N 53 PRD_001234 N6 H26 SING N N 54 PRD_001234 C22 C23 SING N N 55 PRD_001234 C22 C24 SING N N 56 PRD_001234 C22 H27 SING N N 57 PRD_001234 C24 C25 SING N N 58 PRD_001234 C24 H28 SING N N 59 PRD_001234 C24 H29 SING N N 60 PRD_001234 C25 C26 SING N N 61 PRD_001234 C25 C27 SING N N 62 PRD_001234 C25 H30 SING N N 63 PRD_001234 C26 H31 SING N N 64 PRD_001234 C26 H32 SING N N 65 PRD_001234 C26 H33 SING N N 66 PRD_001234 C27 H34 SING N N 67 PRD_001234 C27 H35 SING N N 68 PRD_001234 C27 H36 SING N N 69 PRD_001234 C1 N2 SING N N 70 PRD_001234 SE1 C23 SING N N 71 PRD_001234 N1 C23 DOUB N N 72 PRD_001234 C5 N3 DOUB N N 73 PRD_001234 C5 SE2 SING N N 74 PRD_001234 C10 N4 SING N N 75 PRD_001234 C14 N5 DOUB N N 76 PRD_001234 C14 SE3 SING N N 77 PRD_001234 C19 N6 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_001234 SMILES ACDLabs 12.01 "O=C3NC(c1[se]cc(n1)C(=O)NC(c4nc(C(=O)NC(c2[se]cc3n2)CC(C)C)c[se]4)CC(C)C)CC(C)C" PRD_001234 InChI InChI 1.03 "InChI=1S/C27H36N6O3Se3/c1-13(2)7-16-25-31-20(10-37-25)23(35)29-18(9-15(5)6)27-33-21(12-39-27)24(36)30-17(8-14(3)4)26-32-19(11-38-26)22(34)28-16/h10-18H,7-9H2,1-6H3,(H,28,34)(H,29,35)(H,30,36)" PRD_001234 InChIKey InChI 1.03 HOJGTOQKNJHQCA-UHFFFAOYSA-N PRD_001234 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@@H]1NC(=O)c2c[se]c(n2)[C@H](CC(C)C)NC(=O)c3c[se]c(n3)[C@H](CC(C)C)NC(=O)c4c[se]c1n4" PRD_001234 SMILES CACTVS 3.385 "CC(C)C[CH]1NC(=O)c2c[se]c(n2)[CH](CC(C)C)NC(=O)c3c[se]c(n3)[CH](CC(C)C)NC(=O)c4c[se]c1n4" PRD_001234 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@H]1c2nc(c[se]2)C(=O)N[C@H](c3nc(c[se]3)C(=O)N[C@H](c4nc(c[se]4)C(=O)N1)CC(C)C)CC(C)C" PRD_001234 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC1c2nc(c[se]2)C(=O)NC(c3nc(c[se]3)C(=O)NC(c4nc(c[se]4)C(=O)N1)CC(C)C)CC(C)C" # _pdbx_chem_comp_identifier.comp_id PRD_001234 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(4R,11R,18S)-4,11,18-tris(2-methylpropyl)-6,13,20-triselena-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1~5,8~.1~12,15~]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione" #