data_PRDCC_002204 # _chem_comp.id PRD_002204 _chem_comp.name ? _chem_comp.formula "C21 H34 N4 O7" _chem_comp.formula_weight 454.517 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002204 O1 O1 O 0 1 N N N -7.640 24.863 -5.830 -6.554 1.408 0.577 5OM 1 O01 polymer 1 1 1 ? ? ? PRD_002204 C1 C1 C 0 1 N N N -8.277 25.880 -5.110 -6.708 0.045 0.179 5OM 1 C02 polymer 1 1 2 ? ? ? PRD_002204 C2 C2 C 0 1 N N N -7.412 27.148 -5.020 -5.505 -0.380 -0.665 5OM 1 C03 polymer 1 1 3 ? ? ? PRD_002204 C3 C3 C 0 1 N N N -6.112 26.929 -4.244 -4.225 -0.231 0.159 5OM 1 C04 polymer 1 1 4 ? ? ? PRD_002204 C4 C4 C 0 1 N N N -5.270 28.234 -4.228 -3.022 -0.655 -0.685 5OM 1 C05 polymer 1 1 5 ? ? ? PRD_002204 C5 C5 C 0 1 N N N -3.775 27.976 -3.862 -1.742 -0.506 0.140 5OM 1 C06 polymer 1 1 6 ? ? ? PRD_002204 C6 C6 C 0 1 N N N -3.033 29.332 -3.746 -0.539 -0.930 -0.705 5OM 1 C07 polymer 1 1 7 ? ? ? PRD_002204 C7 C7 C 0 1 N N S -1.570 29.158 -3.332 0.739 -0.782 0.119 5OM 1 CA polymer 1 1 8 ? ? ? PRD_002204 N1 N1 N 0 1 N N N -1.102 30.449 -2.959 1.000 0.638 0.451 5OM 1 N polymer 1 1 9 ? ? ? PRD_002204 C8 C8 C 0 1 N N N -0.840 28.439 -4.456 1.926 -1.324 -0.632 5OM 1 C polymer 1 1 10 ? ? ? PRD_002204 O2 O2 O 0 1 N N N -0.676 27.234 -4.355 2.019 -1.126 -1.823 5OM 1 O polymer 1 1 11 ? ? ? PRD_002204 O3 O3 O 0 1 N N N -8.619 25.438 -3.793 -6.791 -0.784 1.340 5OM 1 O29 polymer 1 1 12 ? ? ? PRD_002204 C9 C9 C 0 1 N N S -9.465 26.338 -5.973 -7.988 -0.104 -0.646 5OM 1 C30 polymer 1 1 13 ? ? ? PRD_002204 C10 C10 C 0 1 N N N -10.345 27.222 -5.286 -9.325 0.099 0.070 5OM 1 C31 polymer 1 1 14 ? ? ? PRD_002204 O4 O4 O 0 1 N N N -10.710 25.825 -5.494 -8.861 -1.191 -0.331 5OM 1 O32 polymer 1 1 15 ? ? ? PRD_002204 N2 N2 N 0 1 N N N -0.352 29.080 -5.670 2.905 -2.000 -0.002 DPR 2 N polymer 1 1 16 ? ? ? PRD_002204 C11 C11 C 0 1 N N R -0.440 30.587 -6.065 4.284 -2.140 -0.476 DPR 2 CA polymer 1 1 17 ? ? ? PRD_002204 C12 C12 C 0 1 N N N -0.298 30.536 -7.597 4.960 -3.254 0.324 DPR 2 CB polymer 1 1 18 ? ? ? PRD_002204 C13 C13 C 0 1 N N N 0.437 29.485 -7.848 3.918 -3.739 1.343 DPR 2 CG polymer 1 1 19 ? ? ? PRD_002204 C14 C14 C 0 1 N N N 0.223 28.459 -6.636 2.765 -2.730 1.258 DPR 2 CD polymer 1 1 20 ? ? ? PRD_002204 C15 C15 C 0 1 N N N 0.641 31.274 -5.555 5.002 -0.822 -0.210 DPR 2 C polymer 1 1 21 ? ? ? PRD_002204 O5 O5 O 0 1 N N N 1.737 30.729 -5.385 6.200 -0.710 -0.364 DPR 2 O polymer 1 1 22 ? ? ? PRD_002204 N3 N3 N 0 1 N N N 0.440 32.661 -5.181 4.192 0.184 0.222 ALA 3 N polymer 1 1 23 ? ? ? PRD_002204 C16 C16 C 0 1 N N S 1.472 33.531 -4.683 4.709 1.570 0.351 ALA 3 CA polymer 1 1 24 ? ? ? PRD_002204 C17 C17 C 0 1 N N N 2.386 32.930 -3.634 3.478 2.357 0.733 ALA 3 C polymer 1 1 25 ? ? ? PRD_002204 O6 O6 O 0 1 N N N 3.602 33.034 -3.831 3.069 2.242 1.879 ALA 3 O polymer 1 1 26 ? ? ? PRD_002204 C18 C18 C 0 1 N N N 0.823 34.815 -4.185 5.274 2.065 -0.979 ALA 3 CB polymer 1 1 27 ? ? ? PRD_002204 N4 N4 N 0 1 N N N 1.960 32.268 -2.427 2.844 3.165 -0.144 DAL 4 N polymer 1 1 28 ? ? ? PRD_002204 C19 C19 C 0 1 N N R 0.617 32.068 -2.032 1.378 2.988 -0.294 DAL 4 CA polymer 1 1 29 ? ? ? PRD_002204 C20 C20 C 0 1 N N N 0.525 32.167 -0.516 0.605 3.457 0.931 DAL 4 CB polymer 1 1 30 ? ? ? PRD_002204 C21 C21 C 0 1 N N N 0.208 30.657 -2.431 1.161 1.516 -0.572 DAL 4 C polymer 1 1 31 ? ? ? PRD_002204 O7 O7 O 0 1 N N N 0.987 29.706 -2.347 1.154 1.149 -1.735 DAL 4 O polymer 1 1 32 ? ? ? PRD_002204 H1 H1 H 0 1 N N N -6.894 24.544 -5.336 -6.491 2.029 -0.162 5OM 1 H1 polymer 1 1 33 ? ? ? PRD_002204 H2 H2 H 0 1 N N N -7.161 27.475 -6.040 -5.623 -1.420 -0.969 5OM 1 H20 polymer 1 1 34 ? ? ? PRD_002204 H3 H3 H 0 1 N N N -7.993 27.934 -4.516 -5.442 0.252 -1.551 5OM 1 H3 polymer 1 1 35 ? ? ? PRD_002204 H4 H4 H 0 1 N N N -6.351 26.638 -3.210 -4.108 0.809 0.463 5OM 1 H4 polymer 1 1 36 ? ? ? PRD_002204 H5 H5 H 0 1 N N N -5.532 26.128 -4.726 -4.288 -0.863 1.045 5OM 1 H5 polymer 1 1 37 ? ? ? PRD_002204 H6 H6 H 0 1 N N N -5.314 28.695 -5.226 -3.140 -1.695 -0.989 5OM 1 H6 polymer 1 1 38 ? ? ? PRD_002204 H7 H7 H 0 1 N N N -5.701 28.923 -3.487 -2.959 -0.023 -1.571 5OM 1 H7 polymer 1 1 39 ? ? ? PRD_002204 H8 H8 H 0 1 N N N -3.719 27.443 -2.901 -1.624 0.534 0.443 5OM 1 H8 polymer 1 1 40 ? ? ? PRD_002204 H9 H9 H 0 1 N N N -3.305 27.366 -4.647 -1.805 -1.138 1.026 5OM 1 H9 polymer 1 1 41 ? ? ? PRD_002204 H10 H10 H 0 1 N N N -3.067 29.839 -4.722 -0.657 -1.970 -1.008 5OM 1 H10 polymer 1 1 42 ? ? ? PRD_002204 H11 H11 H 0 1 N N N -3.543 29.951 -2.993 -0.476 -0.298 -1.590 5OM 1 H11 polymer 1 1 43 ? ? ? PRD_002204 H12 H12 H 0 1 N N N -1.551 28.503 -2.449 0.622 -1.348 1.053 5OM 1 HA polymer 1 1 44 ? ? ? PRD_002204 H13 H13 H 0 1 N N N -1.710 31.235 -3.070 1.066 0.911 1.390 5OM 1 H polymer 1 1 45 ? ? ? PRD_002204 H14 H14 H 0 1 N N N -7.831 25.175 -3.332 -6.897 -1.725 1.145 5OM 1 H31 polymer 1 1 46 ? ? ? PRD_002204 H15 H15 H 0 1 N N N -9.297 26.455 -7.054 -7.918 0.205 -1.689 5OM 1 H32 polymer 1 1 47 ? ? ? PRD_002204 H16 H16 H 0 1 N N N -10.090 27.581 -4.278 -9.301 0.340 1.132 5OM 1 H33 polymer 1 1 48 ? ? ? PRD_002204 H17 H17 H 0 1 N N N -10.869 28.017 -5.837 -10.143 0.544 -0.498 5OM 1 H34 polymer 1 1 49 ? ? ? PRD_002204 H18 H18 H 0 1 N N N -1.412 31.011 -5.772 4.307 -2.355 -1.538 DPR 2 HA polymer 1 1 50 ? ? ? PRD_002204 H19 H19 H 0 1 N N N -1.286 30.436 -8.071 5.246 -4.071 -0.338 DPR 2 HB2 polymer 1 1 51 ? ? ? PRD_002204 H20 H20 H 0 1 N N N 0.195 31.447 -7.967 5.836 -2.867 0.842 DPR 2 HB3 polymer 1 1 52 ? ? ? PRD_002204 H21 H21 H 0 1 N N N 0.122 29.022 -8.795 3.566 -4.734 1.074 DPR 2 HG2 polymer 1 1 53 ? ? ? PRD_002204 H22 H22 H 0 1 N N N 1.496 29.773 -7.916 4.340 -3.746 2.346 DPR 2 HG3 polymer 1 1 54 ? ? ? PRD_002204 H23 H23 H 0 1 N N N 1.197 28.073 -6.301 2.822 -2.036 2.093 DPR 2 HD2 polymer 1 1 55 ? ? ? PRD_002204 H24 H24 H 0 1 N N N -0.409 27.622 -6.967 1.813 -3.257 1.274 DPR 2 HD3 polymer 1 1 56 ? ? ? PRD_002204 H25 H25 H 0 1 N N N -0.481 33.039 -5.276 3.262 0.007 0.472 ALA 3 H polymer 1 1 57 ? ? ? PRD_002204 H26 H26 H 0 1 N N N 2.110 33.811 -5.534 5.458 1.630 1.136 ALA 3 HA polymer 1 1 58 ? ? ? PRD_002204 H27 H27 H 0 1 N N N 1.599 35.493 -3.800 4.488 2.053 -1.735 ALA 3 HB1 polymer 1 1 59 ? ? ? PRD_002204 H28 H28 H 0 1 N N N 0.290 35.302 -5.015 5.646 3.083 -0.860 ALA 3 HB2 polymer 1 1 60 ? ? ? PRD_002204 H29 H29 H 0 1 N N N 0.111 34.578 -3.381 6.090 1.414 -1.293 ALA 3 HB3 polymer 1 1 61 ? ? ? PRD_002204 H30 H30 H 0 1 N N N 2.673 31.921 -1.818 3.319 3.858 -0.656 DAL 4 H polymer 1 1 62 ? ? ? PRD_002204 H31 H31 H 0 1 N N N -0.057 32.802 -2.499 1.035 3.559 -1.172 DAL 4 HA polymer 1 1 63 ? ? ? PRD_002204 H32 H32 H 0 1 N N N -0.517 32.012 -0.201 0.800 4.517 1.100 DAL 4 HB1 polymer 1 1 64 ? ? ? PRD_002204 H33 H33 H 0 1 N N N 1.164 31.397 -0.059 -0.462 3.305 0.769 DAL 4 HB2 polymer 1 1 65 ? ? ? PRD_002204 H34 H34 H 0 1 N N N 0.862 33.163 -0.193 0.925 2.886 1.803 DAL 4 HB3 polymer 1 1 66 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002204 C9 O4 SING N N 1 PRD_002204 C9 C10 SING N N 2 PRD_002204 C9 C1 SING N N 3 PRD_002204 O1 C1 SING N N 4 PRD_002204 O4 C10 SING N N 5 PRD_002204 C1 C2 SING N N 6 PRD_002204 C1 O3 SING N N 7 PRD_002204 C2 C3 SING N N 8 PRD_002204 C8 O2 DOUB N N 9 PRD_002204 C8 C7 SING N N 10 PRD_002204 C3 C4 SING N N 11 PRD_002204 C4 C5 SING N N 12 PRD_002204 C5 C6 SING N N 13 PRD_002204 C6 C7 SING N N 14 PRD_002204 C7 N1 SING N N 15 PRD_002204 O1 H1 SING N N 16 PRD_002204 C2 H2 SING N N 17 PRD_002204 C2 H3 SING N N 18 PRD_002204 C3 H4 SING N N 19 PRD_002204 C3 H5 SING N N 20 PRD_002204 C4 H6 SING N N 21 PRD_002204 C4 H7 SING N N 22 PRD_002204 C5 H8 SING N N 23 PRD_002204 C5 H9 SING N N 24 PRD_002204 C6 H10 SING N N 25 PRD_002204 C6 H11 SING N N 26 PRD_002204 C7 H12 SING N N 27 PRD_002204 N1 H13 SING N N 28 PRD_002204 O3 H14 SING N N 29 PRD_002204 C9 H15 SING N N 30 PRD_002204 C10 H16 SING N N 31 PRD_002204 C10 H17 SING N N 32 PRD_002204 N2 C11 SING N N 33 PRD_002204 N2 C14 SING N N 34 PRD_002204 C11 C12 SING N N 35 PRD_002204 C11 C15 SING N N 36 PRD_002204 C11 H18 SING N N 37 PRD_002204 C12 C13 SING N N 38 PRD_002204 C12 H19 SING N N 39 PRD_002204 C12 H20 SING N N 40 PRD_002204 C13 C14 SING N N 41 PRD_002204 C13 H21 SING N N 42 PRD_002204 C13 H22 SING N N 43 PRD_002204 C14 H23 SING N N 44 PRD_002204 C14 H24 SING N N 45 PRD_002204 C15 O5 DOUB N N 46 PRD_002204 N3 C16 SING N N 47 PRD_002204 N3 H25 SING N N 48 PRD_002204 C16 C17 SING N N 49 PRD_002204 C16 C18 SING N N 50 PRD_002204 C16 H26 SING N N 51 PRD_002204 C17 O6 DOUB N N 52 PRD_002204 C18 H27 SING N N 53 PRD_002204 C18 H28 SING N N 54 PRD_002204 C18 H29 SING N N 55 PRD_002204 N4 C19 SING N N 56 PRD_002204 N4 H30 SING N N 57 PRD_002204 C19 C20 SING N N 58 PRD_002204 C19 C21 SING N N 59 PRD_002204 C19 H31 SING N N 60 PRD_002204 C20 H32 SING N N 61 PRD_002204 C20 H33 SING N N 62 PRD_002204 C20 H34 SING N N 63 PRD_002204 C21 O7 DOUB N N 64 PRD_002204 N1 C21 SING N N 65 PRD_002204 C8 N2 SING N N 66 PRD_002204 C15 N3 SING N N 67 PRD_002204 C17 N4 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002204 InChI InChI 1.06 "InChI=1S/C21H34N4O7/c1-12-17(26)22-13(2)18(27)24-14(7-4-3-5-9-21(30,31)16-11-32-16)20(29)25-10-6-8-15(25)19(28)23-12/h12-16,30-31H,3-11H2,1-2H3,(H,22,26)(H,23,28)(H,24,27)/t12-,13+,14-,15+,16-/m0/s1" PRD_002204 InChIKey InChI 1.06 XCORHWCLHJSFPU-NPJQDHAYSA-N PRD_002204 SMILES_CANONICAL CACTVS 3.385 "C[C@H]1NC(=O)[C@H](C)NC(=O)[C@H]2CCCN2C(=O)[C@H](CCCCCC(O)(O)[C@@H]3CO3)NC1=O" PRD_002204 SMILES CACTVS 3.385 "C[CH]1NC(=O)[CH](C)NC(=O)[CH]2CCCN2C(=O)[CH](CCCCCC(O)(O)[CH]3CO3)NC1=O" PRD_002204 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1C(=O)N[C@H](C(=O)N2CCC[C@@H]2C(=O)N[C@H](C(=O)N1)C)CCCCCC([C@@H]3CO3)(O)O" PRD_002204 SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(=O)NC(C(=O)N2CCCC2C(=O)NC(C(=O)N1)C)CCCCCC(C3CO3)(O)O" # _pdbx_chem_comp_identifier.comp_id PRD_002204 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.4 _pdbx_chem_comp_identifier.identifier "(3~{S},6~{R},9~{S},12~{R})-3-[6,6-bis(oxidanyl)-6-[(2~{S})-oxiran-2-yl]hexyl]-6,9-dimethyl-1,4,7,10-tetrazabicyclo[10.3.0]pentadecane-2,5,8,11-tetrone" #