data_PRDCC_002333 # _chem_comp.id PRD_002333 _chem_comp.name "Pseudoxylallemycin A" _chem_comp.formula "C32 H44 N4 O4" _chem_comp.formula_weight 548.716 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002333 N1 N1 N 0 1 N N N 0.815 3.319 16.432 -0.285 -2.399 1.180 MLE 1 N polymer 1 1 1 ? ? ? PRD_002333 C1 C1 C 0 1 N N N 0.568 1.887 16.207 -1.029 -2.830 2.366 MLE 1 CN polymer 1 1 2 ? ? ? PRD_002333 C2 C2 C 0 1 N N S 1.515 3.711 17.665 1.205 -2.296 1.122 MLE 1 CA polymer 1 1 3 ? ? ? PRD_002333 C3 C3 C 0 1 N N N 0.894 3.081 18.921 1.721 -2.916 -0.178 MLE 1 CB polymer 1 1 4 ? ? ? PRD_002333 C4 C4 C 0 1 N N N -0.445 3.726 19.321 3.245 -3.035 -0.116 MLE 1 CG polymer 1 1 5 ? ? ? PRD_002333 C5 C5 C 0 1 N N N -1.182 2.835 20.317 3.635 -4.042 0.967 MLE 1 CD1 polymer 1 1 6 ? ? ? PRD_002333 C6 C6 C 0 1 N N N -0.231 5.123 19.925 3.775 -3.512 -1.470 MLE 1 CD2 polymer 1 1 7 ? ? ? PRD_002333 C7 C7 C 0 1 N N N 3.047 3.531 17.609 1.545 -0.826 1.161 MLE 1 C polymer 1 1 8 ? ? ? PRD_002333 O1 O1 O 0 1 N N N 3.714 3.658 18.628 1.535 -0.220 2.212 MLE 1 O polymer 1 1 9 ? ? ? PRD_002333 N2 N2 N 0 1 N N N 3.587 3.362 16.380 1.863 -0.189 -0.003 PHE 2 N polymer 1 1 10 ? ? ? PRD_002333 C8 C8 C 0 1 N N S 5.018 3.502 16.131 1.960 1.289 0.093 PHE 2 CA polymer 1 1 11 ? ? ? PRD_002333 C9 C9 C 0 1 N N N 5.215 4.568 15.015 0.555 1.838 0.074 PHE 2 C polymer 1 1 12 ? ? ? PRD_002333 O2 O2 O 0 1 N N N 5.692 4.251 13.923 -0.035 2.006 -0.972 PHE 2 O polymer 1 1 13 ? ? ? PRD_002333 C10 C10 C 0 1 N N N 5.649 2.160 15.706 2.748 1.836 -1.099 PHE 2 CB polymer 1 1 14 ? ? ? PRD_002333 C11 C11 C 0 1 Y N N 5.337 1.074 16.720 4.170 1.343 -1.031 PHE 2 CG polymer 1 1 15 ? ? ? PRD_002333 C12 C12 C 0 1 Y N N 6.039 0.994 17.930 4.519 0.153 -1.642 PHE 2 CD1 polymer 1 1 16 ? ? ? PRD_002333 C13 C13 C 0 1 Y N N 4.296 0.171 16.504 5.127 2.082 -0.362 PHE 2 CD2 polymer 1 1 17 ? ? ? PRD_002333 C14 C14 C 0 1 Y N N 5.711 0.047 18.888 5.824 -0.300 -1.580 PHE 2 CE1 polymer 1 1 18 ? ? ? PRD_002333 C15 C15 C 0 1 Y N N 3.960 -0.782 17.469 6.432 1.630 -0.299 PHE 2 CE2 polymer 1 1 19 ? ? ? PRD_002333 C16 C16 C 0 1 Y N N 4.668 -0.839 18.660 6.779 0.437 -0.906 PHE 2 CZ polymer 1 1 20 ? ? ? PRD_002333 N3 N3 N 0 1 N N N 4.781 5.839 15.223 -0.039 2.144 1.278 MLE 3 N polymer 1 1 21 ? ? ? PRD_002333 C17 C17 C 0 1 N N N 4.793 6.715 14.044 0.702 2.522 2.484 MLE 3 CN polymer 1 1 22 ? ? ? PRD_002333 C18 C18 C 0 1 N N S 4.283 6.367 16.498 -1.530 2.043 1.212 MLE 3 CA polymer 1 1 23 ? ? ? PRD_002333 C19 C19 C 0 1 N N N 4.828 7.770 16.840 -2.043 2.718 -0.061 MLE 3 CB polymer 1 1 24 ? ? ? PRD_002333 C20 C20 C 0 1 N N N 6.362 7.905 16.845 -1.496 4.145 -0.137 MLE 3 CG polymer 1 1 25 ? ? ? PRD_002333 C21 C21 C 0 1 N N N 7.018 6.938 17.818 -1.906 4.779 -1.468 MLE 3 CD1 polymer 1 1 26 ? ? ? PRD_002333 C22 C22 C 0 1 N N N 6.724 9.359 17.198 -2.065 4.972 1.018 MLE 3 CD2 polymer 1 1 27 ? ? ? PRD_002333 C23 C23 C 0 1 N N N 2.738 6.407 16.590 -1.869 0.572 1.188 MLE 3 C polymer 1 1 28 ? ? ? PRD_002333 O3 O3 O 0 1 N N N 2.211 6.894 17.585 -1.862 -0.078 2.211 MLE 3 O polymer 1 1 29 ? ? ? PRD_002333 N4 N4 N 0 1 N N N 2.052 5.832 15.583 -2.185 -0.014 -0.003 PHE 4 N polymer 1 1 30 ? ? ? PRD_002333 C24 C24 C 0 1 N N S 0.596 5.692 15.629 -2.283 -1.495 0.029 PHE 4 CA polymer 1 1 31 ? ? ? PRD_002333 C25 C25 C 0 1 N N N 0.205 4.192 15.577 -0.877 -2.049 -0.013 PHE 4 C polymer 1 1 32 ? ? ? PRD_002333 O4 O4 O 0 1 N N N -0.607 3.804 14.734 -0.283 -2.172 -1.063 PHE 4 O polymer 1 1 33 ? ? ? PRD_002333 C26 C26 C 0 1 N N N -0.056 6.463 14.461 -3.068 -1.990 -1.187 PHE 4 CB polymer 1 1 34 ? ? ? PRD_002333 C27 C27 C 0 1 Y N N 0.594 7.820 14.297 -4.490 -1.500 -1.101 PHE 4 CG polymer 1 1 35 ? ? ? PRD_002333 C28 C28 C 0 1 Y N N 0.503 8.781 15.309 -4.838 -0.285 -1.661 PHE 4 CD1 polymer 1 1 36 ? ? ? PRD_002333 C29 C29 C 0 1 Y N N 1.403 8.098 13.196 -5.449 -2.267 -0.466 PHE 4 CD2 polymer 1 1 37 ? ? ? PRD_002333 C30 C30 C 0 1 Y N N 1.241 9.961 15.230 -6.142 0.165 -1.582 PHE 4 CE1 polymer 1 1 38 ? ? ? PRD_002333 C31 C31 C 0 1 Y N N 2.146 9.276 13.125 -6.753 -1.817 -0.386 PHE 4 CE2 polymer 1 1 39 ? ? ? PRD_002333 C32 C32 C 0 1 Y N N 2.085 10.196 14.152 -7.100 -0.600 -0.942 PHE 4 CZ polymer 1 1 40 ? ? ? PRD_002333 H1 H1 H 0 1 N N N 0.040 1.751 15.251 -1.269 -1.962 2.980 MLE 1 HN1 polymer 1 1 41 ? ? ? PRD_002333 H2 H2 H 0 1 N N N 1.528 1.350 16.175 -1.951 -3.323 2.058 MLE 1 HN2 polymer 1 1 42 ? ? ? PRD_002333 H3 H3 H 0 1 N N N -0.048 1.488 17.026 -0.421 -3.526 2.944 MLE 1 HN3 polymer 1 1 43 ? ? ? PRD_002333 H4 H4 H 0 1 N N N 1.355 4.794 17.774 1.647 -2.804 1.978 MLE 1 HA polymer 1 1 44 ? ? ? PRD_002333 H5 H5 H 0 1 N N N 0.724 2.011 18.729 1.285 -3.907 -0.306 MLE 1 HB2 polymer 1 1 45 ? ? ? PRD_002333 H6 H6 H 0 1 N N N 1.601 3.195 19.756 1.440 -2.283 -1.020 MLE 1 HB3 polymer 1 1 46 ? ? ? PRD_002333 H7 H7 H 0 1 N N N -1.064 3.829 18.418 3.676 -2.062 0.120 MLE 1 HG polymer 1 1 47 ? ? ? PRD_002333 H8 H8 H 0 0 N N N -2.136 3.306 20.595 4.720 -4.063 1.071 MLE 1 HD11 polymer 1 1 48 ? ? ? PRD_002333 H9 H9 H 0 0 N N N -1.377 1.855 19.857 3.185 -3.748 1.916 MLE 1 HD12 polymer 1 1 49 ? ? ? PRD_002333 H10 H10 H 0 0 N N N -0.563 2.701 21.217 3.277 -5.033 0.688 MLE 1 HD13 polymer 1 1 50 ? ? ? PRD_002333 H11 H11 H 0 0 N N N -1.204 5.557 20.200 3.497 -2.794 -2.242 MLE 1 HD21 polymer 1 1 51 ? ? ? PRD_002333 H12 H12 H 0 0 N N N 0.401 5.042 20.822 4.861 -3.597 -1.426 MLE 1 HD22 polymer 1 1 52 ? ? ? PRD_002333 H13 H13 H 0 0 N N N 0.263 5.770 19.186 3.344 -4.485 -1.707 MLE 1 HD23 polymer 1 1 53 ? ? ? PRD_002333 H14 H14 H 0 1 N N N 2.984 3.133 15.616 2.016 -0.667 -0.833 PHE 2 H polymer 1 1 54 ? ? ? PRD_002333 H15 H15 H 0 1 N N N 5.522 3.855 17.043 2.454 1.568 1.023 PHE 2 HA polymer 1 1 55 ? ? ? PRD_002333 H16 H16 H 0 1 N N N 5.245 1.866 14.726 2.289 1.494 -2.026 PHE 2 HB2 polymer 1 1 56 ? ? ? PRD_002333 H17 H17 H 0 1 N N N 6.740 2.282 15.632 2.740 2.926 -1.071 PHE 2 HB3 polymer 1 1 57 ? ? ? PRD_002333 H18 H18 H 0 1 N N N 6.850 1.682 18.120 3.772 -0.423 -2.169 PHE 2 HD1 polymer 1 1 58 ? ? ? PRD_002333 H19 H19 H 0 1 N N N 3.742 0.209 15.578 4.856 3.014 0.112 PHE 2 HD2 polymer 1 1 59 ? ? ? PRD_002333 H20 H20 H 0 1 N N N 6.268 -0.001 19.812 6.096 -1.230 -2.057 PHE 2 HE1 polymer 1 1 60 ? ? ? PRD_002333 H21 H21 H 0 1 N N N 3.150 -1.473 17.288 7.179 2.208 0.224 PHE 2 HE2 polymer 1 1 61 ? ? ? PRD_002333 H22 H22 H 0 1 N N N 4.408 -1.572 19.409 7.799 0.083 -0.857 PHE 2 HZ polymer 1 1 62 ? ? ? PRD_002333 H23 H23 H 0 1 N N N 5.194 6.163 13.181 1.771 2.521 2.268 MLE 3 HN1 polymer 1 1 63 ? ? ? PRD_002333 H24 H24 H 0 1 N N N 3.768 7.046 13.823 0.397 3.520 2.799 MLE 3 HN2 polymer 1 1 64 ? ? ? PRD_002333 H25 H25 H 0 1 N N N 5.426 7.592 14.245 0.491 1.808 3.280 MLE 3 HN3 polymer 1 1 65 ? ? ? PRD_002333 H26 H26 H 0 1 N N N 4.628 5.692 17.295 -1.974 2.514 2.089 MLE 3 HA polymer 1 1 66 ? ? ? PRD_002333 H27 H27 H 0 1 N N N 4.428 8.478 16.099 -1.709 2.154 -0.932 MLE 3 HB2 polymer 1 1 67 ? ? ? PRD_002333 H28 H28 H 0 1 N N N 4.461 8.041 17.841 -3.132 2.747 -0.043 MLE 3 HB3 polymer 1 1 68 ? ? ? PRD_002333 H29 H29 H 0 1 N N N 6.733 7.691 15.832 -0.409 4.122 -0.065 MLE 3 HG polymer 1 1 69 ? ? ? PRD_002333 H30 H30 H 0 0 N N N 8.110 7.070 17.787 -2.994 4.802 -1.539 MLE 3 HD11 polymer 1 1 70 ? ? ? PRD_002333 H31 H31 H 0 0 N N N 6.653 7.138 18.836 -1.517 5.795 -1.522 MLE 3 HD12 polymer 1 1 71 ? ? ? PRD_002333 H32 H32 H 0 0 N N N 6.766 5.905 17.535 -1.501 4.190 -2.291 MLE 3 HD13 polymer 1 1 72 ? ? ? PRD_002333 H33 H33 H 0 0 N N N 7.818 9.473 17.206 -1.773 4.521 1.966 MLE 3 HD21 polymer 1 1 73 ? ? ? PRD_002333 H34 H34 H 0 0 N N N 6.290 10.037 16.448 -1.676 5.988 0.964 MLE 3 HD22 polymer 1 1 74 ? ? ? PRD_002333 H35 H35 H 0 0 N N N 6.322 9.606 18.192 -3.153 4.995 0.947 MLE 3 HD23 polymer 1 1 75 ? ? ? PRD_002333 H36 H36 H 0 1 N N N 2.550 5.493 14.785 -2.336 0.499 -0.812 PHE 4 H polymer 1 1 76 ? ? ? PRD_002333 H37 H37 H 0 1 N N N 0.219 6.113 16.573 -2.779 -1.813 0.946 PHE 4 HA polymer 1 1 77 ? ? ? PRD_002333 H38 H38 H 0 1 N N N 0.068 5.887 13.532 -2.606 -1.608 -2.098 PHE 4 HB2 polymer 1 1 78 ? ? ? PRD_002333 H39 H39 H 0 1 N N N -1.128 6.597 14.669 -3.060 -3.080 -1.205 PHE 4 HB3 polymer 1 1 79 ? ? ? PRD_002333 H40 H40 H 0 1 N N N -0.143 8.608 16.157 -4.090 0.313 -2.161 PHE 4 HD1 polymer 1 1 80 ? ? ? PRD_002333 H41 H41 H 0 1 N N N 1.455 7.388 12.384 -5.178 -3.219 -0.032 PHE 4 HD2 polymer 1 1 81 ? ? ? PRD_002333 H42 H42 H 0 1 N N N 1.156 10.699 16.014 -6.414 1.115 -2.019 PHE 4 HE1 polymer 1 1 82 ? ? ? PRD_002333 H43 H43 H 0 1 N N N 2.770 9.469 12.265 -7.502 -2.417 0.110 PHE 4 HE2 polymer 1 1 83 ? ? ? PRD_002333 H44 H44 H 0 1 N N N 2.688 11.091 14.118 -8.119 -0.248 -0.880 PHE 4 HZ polymer 1 1 84 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002333 N1 C1 SING N N 1 PRD_002333 N1 C2 SING N N 2 PRD_002333 C1 H1 SING N N 3 PRD_002333 C1 H2 SING N N 4 PRD_002333 C1 H3 SING N N 5 PRD_002333 C2 C3 SING N N 6 PRD_002333 C2 C7 SING N N 7 PRD_002333 C2 H4 SING N N 8 PRD_002333 C3 C4 SING N N 9 PRD_002333 C3 H5 SING N N 10 PRD_002333 C3 H6 SING N N 11 PRD_002333 C4 C5 SING N N 12 PRD_002333 C4 C6 SING N N 13 PRD_002333 C4 H7 SING N N 14 PRD_002333 C5 H8 SING N N 15 PRD_002333 C5 H9 SING N N 16 PRD_002333 C5 H10 SING N N 17 PRD_002333 C6 H11 SING N N 18 PRD_002333 C6 H12 SING N N 19 PRD_002333 C6 H13 SING N N 20 PRD_002333 C7 O1 DOUB N N 21 PRD_002333 N2 C8 SING N N 22 PRD_002333 N2 H14 SING N N 23 PRD_002333 C8 C9 SING N N 24 PRD_002333 C8 C10 SING N N 25 PRD_002333 C8 H15 SING N N 26 PRD_002333 C9 O2 DOUB N N 27 PRD_002333 C10 C11 SING N N 28 PRD_002333 C10 H16 SING N N 29 PRD_002333 C10 H17 SING N N 30 PRD_002333 C11 C12 DOUB Y N 31 PRD_002333 C11 C13 SING Y N 32 PRD_002333 C12 C14 SING Y N 33 PRD_002333 C12 H18 SING N N 34 PRD_002333 C13 C15 DOUB Y N 35 PRD_002333 C13 H19 SING N N 36 PRD_002333 C14 C16 DOUB Y N 37 PRD_002333 C14 H20 SING N N 38 PRD_002333 C15 C16 SING Y N 39 PRD_002333 C15 H21 SING N N 40 PRD_002333 C16 H22 SING N N 41 PRD_002333 N3 C17 SING N N 42 PRD_002333 N3 C18 SING N N 43 PRD_002333 C17 H23 SING N N 44 PRD_002333 C17 H24 SING N N 45 PRD_002333 C17 H25 SING N N 46 PRD_002333 C18 C19 SING N N 47 PRD_002333 C18 C23 SING N N 48 PRD_002333 C18 H26 SING N N 49 PRD_002333 C19 C20 SING N N 50 PRD_002333 C19 H27 SING N N 51 PRD_002333 C19 H28 SING N N 52 PRD_002333 C20 C21 SING N N 53 PRD_002333 C20 C22 SING N N 54 PRD_002333 C20 H29 SING N N 55 PRD_002333 C21 H30 SING N N 56 PRD_002333 C21 H31 SING N N 57 PRD_002333 C21 H32 SING N N 58 PRD_002333 C22 H33 SING N N 59 PRD_002333 C22 H34 SING N N 60 PRD_002333 C22 H35 SING N N 61 PRD_002333 C23 O3 DOUB N N 62 PRD_002333 N4 C24 SING N N 63 PRD_002333 N4 H36 SING N N 64 PRD_002333 C24 C25 SING N N 65 PRD_002333 C24 C26 SING N N 66 PRD_002333 C24 H37 SING N N 67 PRD_002333 C25 O4 DOUB N N 68 PRD_002333 C26 C27 SING N N 69 PRD_002333 C26 H38 SING N N 70 PRD_002333 C26 H39 SING N N 71 PRD_002333 C27 C28 DOUB Y N 72 PRD_002333 C27 C29 SING Y N 73 PRD_002333 C28 C30 SING Y N 74 PRD_002333 C28 H40 SING N N 75 PRD_002333 C29 C31 DOUB Y N 76 PRD_002333 C29 H41 SING N N 77 PRD_002333 C30 C32 DOUB Y N 78 PRD_002333 C30 H42 SING N N 79 PRD_002333 C31 C32 SING Y N 80 PRD_002333 C31 H43 SING N N 81 PRD_002333 C32 H44 SING N N 82 PRD_002333 N1 C25 SING N N 83 PRD_002333 C7 N2 SING N N 84 PRD_002333 C9 N3 SING N N 85 PRD_002333 C23 N4 SING N N 86 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002333 InChI InChI 1.06 "InChI=1S/C32H44N4O4/c1-21(2)17-27-29(37)33-26(20-24-15-11-8-12-16-24)32(40)36(6)28(18-22(3)4)30(38)34-25(31(39)35(27)5)19-23-13-9-7-10-14-23/h7-16,21-22,25-28H,17-20H2,1-6H3,(H,33,37)(H,34,38)/t25-,26-,27-,28-/m0/s1" PRD_002333 InChIKey InChI 1.06 LSLKDWVWAHUJKJ-LJWNLINESA-N PRD_002333 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@@H]1N(C)C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](Cc3ccccc3)NC1=O" PRD_002333 SMILES CACTVS 3.385 "CC(C)C[CH]1N(C)C(=O)[CH](Cc2ccccc2)NC(=O)[CH](CC(C)C)N(C)C(=O)[CH](Cc3ccccc3)NC1=O" PRD_002333 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@H]1C(=O)N[C@H](C(=O)N([C@H](C(=O)N[C@H](C(=O)N1C)Cc2ccccc2)CC(C)C)C)Cc3ccccc3" PRD_002333 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC1C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)N1C)Cc2ccccc2)CC(C)C)C)Cc3ccccc3" # _pdbx_chem_comp_identifier.comp_id PRD_002333 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},6~{S},9~{S},12~{S})-1,7-dimethyl-6,12-bis(2-methylpropyl)-3,9-bis(phenylmethyl)-1,4,7,10-tetrazacyclododecane-2,5,8,11-tetrone" #