data_PRDCC_002391 # _chem_comp.id PRD_002391 _chem_comp.name "covalently bound calpain inhibitor II" _chem_comp.formula "C19 H37 N3 O4 S" _chem_comp.formula_weight 403.580 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002391 C1 C1 C 0 1 N N N 11.511 5.228 23.477 -4.643 -0.292 -1.739 ACE 1 C polymer 1 1 1 ? ? ? PRD_002391 O1 O1 O 0 1 N N N 11.285 5.095 24.669 -3.794 -1.145 -1.889 ACE 1 O polymer 1 1 2 ? ? ? PRD_002391 C2 C2 C 0 1 N N N 12.486 6.347 22.972 -5.703 -0.091 -2.792 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_002391 N1 N1 N 0 1 N N N 10.879 4.357 22.590 -4.642 0.473 -0.629 LEU 2 N polymer 1 1 4 ? ? ? PRD_002391 C3 C3 C 0 1 N N S 9.973 3.328 22.960 -3.615 0.273 0.396 LEU 2 CA polymer 1 1 5 ? ? ? PRD_002391 C4 C4 C 0 1 N N N 10.388 1.997 22.233 -2.253 0.503 -0.206 LEU 2 C polymer 1 1 6 ? ? ? PRD_002391 O2 O2 O 0 1 N N N 10.332 1.950 21.031 -2.103 0.444 -1.408 LEU 2 O polymer 1 1 7 ? ? ? PRD_002391 C5 C5 C 0 1 N N N 8.568 3.815 22.449 -3.701 -1.157 0.933 LEU 2 CB polymer 1 1 8 ? ? ? PRD_002391 C6 C6 C 0 1 N N N 7.236 3.148 22.942 -5.064 -1.373 1.593 LEU 2 CG polymer 1 1 9 ? ? ? PRD_002391 C7 C7 C 0 1 N N N 6.167 2.971 21.813 -5.210 -2.843 1.993 LEU 2 CD1 polymer 1 1 10 ? ? ? PRD_002391 C8 C8 C 0 1 N N N 7.401 1.842 23.768 -5.172 -0.492 2.839 LEU 2 CD2 polymer 1 1 11 ? ? ? PRD_002391 N2 N2 N 0 1 N N N 10.772 0.897 22.900 -1.201 0.775 0.592 LEU 3 N polymer 1 1 12 ? ? ? PRD_002391 C9 C9 C 0 1 N N S 11.067 -0.365 22.246 0.098 1.109 0.003 LEU 3 CA polymer 1 1 13 ? ? ? PRD_002391 C10 C10 C 0 1 N N N 9.631 -0.934 21.903 1.198 0.707 0.951 LEU 3 C polymer 1 1 14 ? ? ? PRD_002391 O3 O3 O 0 1 N N N 8.831 -1.163 22.793 0.964 0.585 2.135 LEU 3 O polymer 1 1 15 ? ? ? PRD_002391 C11 C11 C 0 1 N N N 11.828 -1.280 23.111 0.171 2.615 -0.253 LEU 3 CB polymer 1 1 16 ? ? ? PRD_002391 C12 C12 C 0 1 N N N 13.254 -0.847 23.329 1.514 2.959 -0.899 LEU 3 CG polymer 1 1 17 ? ? ? PRD_002391 C13 C13 C 0 1 N N N 14.059 -1.778 24.222 1.585 2.333 -2.293 LEU 3 CD1 polymer 1 1 18 ? ? ? PRD_002391 C14 C14 C 0 1 N N N 13.989 -0.566 21.983 1.651 4.478 -1.015 LEU 3 CD2 polymer 1 1 19 ? ? ? PRD_002391 C15 C15 C 0 1 N N N 7.918 -3.129 19.686 4.130 1.170 2.115 UXS 4 C polymer 1 1 20 ? ? ? PRD_002391 O4 O4 O 0 1 N N N 6.814 -3.558 19.453 4.809 2.000 1.170 UXS 4 O polymer 1 1 21 ? ? ? PRD_002391 C16 C16 C 0 1 N N S 7.901 -1.668 20.179 3.486 -0.011 1.387 UXS 4 CA polymer 1 1 22 ? ? ? PRD_002391 C17 C17 C 0 1 N N N 7.341 -0.868 18.963 4.550 -0.754 0.578 UXS 4 C04 polymer 1 1 23 ? ? ? PRD_002391 C18 C18 C 0 1 N N N 7.161 0.555 19.257 3.933 -2.005 -0.050 UXS 4 C05 polymer 1 1 24 ? ? ? PRD_002391 S1 S1 S 0 1 N N N 6.442 1.415 17.769 5.196 -2.886 -1.010 UXS 4 S06 polymer 1 1 25 ? ? ? PRD_002391 C19 C19 C 0 1 N N N 4.840 2.060 18.359 4.289 -4.314 -1.664 UXS 4 C07 polymer 1 1 26 ? ? ? PRD_002391 N3 N3 N 0 1 N N N 9.268 -1.195 20.591 2.442 0.482 0.484 UXS 4 N polymer 1 1 27 ? ? ? PRD_002391 H1 H1 H 0 1 N N N 12.871 6.914 23.832 -6.561 -0.726 -2.569 ACE 1 H1 polymer 1 1 28 ? ? ? PRD_002391 H2 H2 H 0 1 N N N 13.325 5.885 22.432 -6.016 0.953 -2.798 ACE 1 H2 polymer 1 1 29 ? ? ? PRD_002391 H3 H3 H 0 1 N N N 11.945 7.027 22.297 -5.299 -0.355 -3.769 ACE 1 H3 polymer 1 1 30 ? ? ? PRD_002391 H4 H4 H 0 1 N N N 11.080 4.466 21.616 -5.321 1.155 -0.510 LEU 2 H polymer 1 1 31 ? ? ? PRD_002391 H5 H5 H 0 1 N N N 9.944 3.169 24.048 -3.775 0.978 1.213 LEU 2 HA polymer 1 1 32 ? ? ? PRD_002391 H6 H6 H 0 1 N N N 8.496 4.881 22.711 -3.580 -1.861 0.110 LEU 2 HB2 polymer 1 1 33 ? ? ? PRD_002391 H7 H7 H 0 1 N N N 8.582 3.706 21.354 -2.912 -1.317 1.667 LEU 2 HB3 polymer 1 1 34 ? ? ? PRD_002391 H8 H8 H 0 1 N N N 6.795 3.875 23.640 -5.854 -1.107 0.891 LEU 2 HG polymer 1 1 35 ? ? ? PRD_002391 H9 H9 H 0 0 N N N 5.266 2.500 22.232 -6.142 -2.980 2.540 LEU 2 HD11 polymer 1 1 36 ? ? ? PRD_002391 H10 H10 H 0 0 N N N 5.906 3.956 21.397 -5.220 -3.464 1.097 LEU 2 HD12 polymer 1 1 37 ? ? ? PRD_002391 H11 H11 H 0 0 N N N 6.578 2.334 21.016 -4.371 -3.132 2.626 LEU 2 HD13 polymer 1 1 38 ? ? ? PRD_002391 H12 H12 H 0 0 N N N 6.410 1.464 24.059 -5.069 0.555 2.555 LEU 2 HD21 polymer 1 1 39 ? ? ? PRD_002391 H13 H13 H 0 0 N N N 7.917 1.086 23.159 -6.144 -0.646 3.310 LEU 2 HD22 polymer 1 1 40 ? ? ? PRD_002391 H14 H14 H 0 0 N N N 7.993 2.052 24.671 -4.382 -0.758 3.542 LEU 2 HD23 polymer 1 1 41 ? ? ? PRD_002391 H15 H15 H 0 1 N N N 10.859 0.949 23.895 -1.304 0.751 1.556 LEU 3 H polymer 1 1 42 ? ? ? PRD_002391 H16 H16 H 0 1 N N N 11.611 -0.192 21.306 0.218 0.574 -0.939 LEU 3 HA polymer 1 1 43 ? ? ? PRD_002391 H17 H17 H 0 1 N N N 11.326 -1.334 24.088 -0.639 2.910 -0.920 LEU 3 HB2 polymer 1 1 44 ? ? ? PRD_002391 H18 H18 H 0 1 N N N 11.833 -2.277 22.646 0.075 3.149 0.693 LEU 3 HB3 polymer 1 1 45 ? ? ? PRD_002391 H19 H19 H 0 1 N N N 13.209 0.119 23.853 2.324 2.568 -0.283 LEU 3 HG polymer 1 1 46 ? ? ? PRD_002391 H20 H20 H 0 0 N N N 15.083 -1.390 24.328 2.566 2.523 -2.728 LEU 3 HD11 polymer 1 1 47 ? ? ? PRD_002391 H21 H21 H 0 0 N N N 13.585 -1.837 25.213 1.424 1.257 -2.217 LEU 3 HD12 polymer 1 1 48 ? ? ? PRD_002391 H22 H22 H 0 0 N N N 14.092 -2.781 23.771 0.815 2.771 -2.928 LEU 3 HD13 polymer 1 1 49 ? ? ? PRD_002391 H23 H23 H 0 0 N N N 15.024 -0.254 22.188 1.601 4.925 -0.022 LEU 3 HD21 polymer 1 1 50 ? ? ? PRD_002391 H24 H24 H 0 0 N N N 13.996 -1.480 21.372 2.608 4.723 -1.476 LEU 3 HD22 polymer 1 1 51 ? ? ? PRD_002391 H25 H25 H 0 0 N N N 13.465 0.234 21.440 0.841 4.870 -1.631 LEU 3 HD23 polymer 1 1 52 ? ? ? PRD_002391 H26 H26 H 0 1 N N N 6.880 -4.457 19.154 5.242 2.770 1.562 UXS 4 H1 polymer 1 1 53 ? ? ? PRD_002391 H27 H27 H 0 1 N N N 7.203 -1.576 21.024 3.044 -0.690 2.116 UXS 4 HA polymer 1 1 54 ? ? ? PRD_002391 H28 H28 H 0 1 N N N 6.368 -1.295 18.679 4.929 -0.102 -0.209 UXS 4 H3 polymer 1 1 55 ? ? ? PRD_002391 H29 H29 H 0 1 N N N 8.044 -0.968 18.123 5.370 -1.043 1.235 UXS 4 H4 polymer 1 1 56 ? ? ? PRD_002391 H30 H30 H 0 1 N N N 8.134 1.004 19.504 3.555 -2.657 0.737 UXS 4 H5 polymer 1 1 57 ? ? ? PRD_002391 H31 H31 H 0 1 N N N 6.477 0.669 20.111 3.114 -1.715 -0.708 UXS 4 H6 polymer 1 1 58 ? ? ? PRD_002391 H32 H32 H 0 1 N N N 4.334 2.591 17.540 3.901 -4.908 -0.836 UXS 4 H7 polymer 1 1 59 ? ? ? PRD_002391 H33 H33 H 0 1 N N N 4.211 1.224 18.698 3.460 -3.967 -2.281 UXS 4 H8 polymer 1 1 60 ? ? ? PRD_002391 H34 H34 H 0 1 N N N 5.010 2.754 19.196 4.960 -4.925 -2.267 UXS 4 H9 polymer 1 1 61 ? ? ? PRD_002391 H35 H35 H 0 1 N N N 9.955 -1.061 19.877 2.647 0.647 -0.449 UXS 4 H2 polymer 1 1 62 ? ? ? PRD_002391 H36 H36 H 0 1 N N N 8.382 -3.756 20.462 4.844 0.798 2.850 UXS 4 H13 polymer 1 1 63 ? ? ? PRD_002391 H37 H37 H 0 1 N N N 8.517 -3.182 18.765 3.358 1.751 2.620 UXS 4 H14 polymer 1 1 64 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002391 C1 O1 DOUB N N 1 PRD_002391 C1 C2 SING N N 2 PRD_002391 C2 H1 SING N N 3 PRD_002391 C2 H2 SING N N 4 PRD_002391 C2 H3 SING N N 5 PRD_002391 N1 C3 SING N N 6 PRD_002391 N1 H4 SING N N 7 PRD_002391 C3 C4 SING N N 8 PRD_002391 C3 C5 SING N N 9 PRD_002391 C3 H5 SING N N 10 PRD_002391 C4 O2 DOUB N N 11 PRD_002391 C5 C6 SING N N 12 PRD_002391 C5 H6 SING N N 13 PRD_002391 C5 H7 SING N N 14 PRD_002391 C6 C7 SING N N 15 PRD_002391 C6 C8 SING N N 16 PRD_002391 C6 H8 SING N N 17 PRD_002391 C7 H9 SING N N 18 PRD_002391 C7 H10 SING N N 19 PRD_002391 C7 H11 SING N N 20 PRD_002391 C8 H12 SING N N 21 PRD_002391 C8 H13 SING N N 22 PRD_002391 C8 H14 SING N N 23 PRD_002391 N2 C9 SING N N 24 PRD_002391 N2 H15 SING N N 25 PRD_002391 C9 C10 SING N N 26 PRD_002391 C9 C11 SING N N 27 PRD_002391 C9 H16 SING N N 28 PRD_002391 C10 O3 DOUB N N 29 PRD_002391 C11 C12 SING N N 30 PRD_002391 C11 H17 SING N N 31 PRD_002391 C11 H18 SING N N 32 PRD_002391 C12 C13 SING N N 33 PRD_002391 C12 C14 SING N N 34 PRD_002391 C12 H19 SING N N 35 PRD_002391 C13 H20 SING N N 36 PRD_002391 C13 H21 SING N N 37 PRD_002391 C13 H22 SING N N 38 PRD_002391 C14 H23 SING N N 39 PRD_002391 C14 H24 SING N N 40 PRD_002391 C14 H25 SING N N 41 PRD_002391 S1 C19 SING N N 42 PRD_002391 S1 C18 SING N N 43 PRD_002391 C17 C18 SING N N 44 PRD_002391 C17 C16 SING N N 45 PRD_002391 O4 C15 SING N N 46 PRD_002391 C15 C16 SING N N 47 PRD_002391 C16 N3 SING N N 48 PRD_002391 O4 H26 SING N N 49 PRD_002391 C16 H27 SING N N 50 PRD_002391 C17 H28 SING N N 51 PRD_002391 C17 H29 SING N N 52 PRD_002391 C18 H30 SING N N 53 PRD_002391 C18 H31 SING N N 54 PRD_002391 C19 H32 SING N N 55 PRD_002391 C19 H33 SING N N 56 PRD_002391 C19 H34 SING N N 57 PRD_002391 N3 H35 SING N N 58 PRD_002391 C15 H36 SING N N 59 PRD_002391 C15 H37 SING N N 60 PRD_002391 C1 N1 SING N N 61 PRD_002391 C4 N2 SING N N 62 PRD_002391 C10 N3 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002391 InChI InChI 1.06 "InChI=1S/C19H37N3O4S/c1-12(2)9-16(20-14(5)24)19(26)22-17(10-13(3)4)18(25)21-15(11-23)7-8-27-6/h12-13,15-17,23H,7-11H2,1-6H3,(H,20,24)(H,21,25)(H,22,26)/t15-,16-,17-/m0/s1" PRD_002391 InChIKey InChI 1.06 LDYZXCKXQNCXOP-ULQDDVLXSA-N PRD_002391 SMILES_CANONICAL CACTVS 3.385 "CSCC[C@@H](CO)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(C)=O" PRD_002391 SMILES CACTVS 3.385 "CSCC[CH](CO)NC(=O)[CH](CC(C)C)NC(=O)[CH](CC(C)C)NC(C)=O" PRD_002391 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCSC)CO)NC(=O)C" PRD_002391 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC(C)C)C(=O)NC(CCSC)CO)NC(=O)C" # _pdbx_chem_comp_identifier.comp_id PRD_002391 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-acetamido-4-methyl-~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-4-methylsulfanyl-1-oxidanyl-butan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]pentanamide" #