data_PRDCC_002424 # _chem_comp.id PRD_002424 _chem_comp.name "Darobactin 22" _chem_comp.formula "C53 H67 N15 O11" _chem_comp.formula_weight 1090.193 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002424 N1 N1 N 0 1 N N N 163.776 163.852 150.963 -9.611 0.109 3.154 TRP 1 N polymer 1 1 1 ? ? ? PRD_002424 C1 C1 C 0 1 N N S 164.303 162.416 150.693 -10.299 0.041 1.858 TRP 1 CA polymer 1 1 2 ? ? ? PRD_002424 C2 C2 C 0 1 N N N 163.395 161.350 151.366 -9.616 0.959 0.872 TRP 1 C polymer 1 1 3 ? ? ? PRD_002424 O1 O1 O 0 1 N N N 162.283 161.650 151.758 -10.287 1.775 0.274 TRP 1 O polymer 1 1 4 ? ? ? PRD_002424 C3 C3 C 0 1 N N N 164.566 162.171 149.182 -10.295 -1.399 1.341 TRP 1 CB polymer 1 1 5 ? ? ? PRD_002424 C4 C4 C 0 1 Y N N 165.079 160.791 148.903 -9.060 -1.642 0.512 TRP 1 CG polymer 1 1 6 ? ? ? PRD_002424 C5 C5 C 0 1 Y N N 164.314 159.857 148.202 -8.972 -1.564 -0.826 TRP 1 CD1 polymer 1 1 7 ? ? ? PRD_002424 C6 C6 C 0 1 Y N N 166.186 160.085 149.481 -7.733 -2.013 1.008 TRP 1 CD2 polymer 1 1 8 ? ? ? PRD_002424 N2 N2 N 0 1 Y N N 164.902 158.595 148.397 -7.689 -1.819 -1.223 TRP 1 NE1 polymer 1 1 9 ? ? ? PRD_002424 C7 C7 C 0 1 Y N N 166.002 158.772 149.202 -6.904 -2.078 -0.122 TRP 1 CE2 polymer 1 1 10 ? ? ? PRD_002424 C8 C8 C 0 1 Y N N 167.254 160.524 150.269 -7.207 -2.295 2.273 TRP 1 CE3 polymer 1 1 11 ? ? ? PRD_002424 C9 C9 C 0 1 Y N N 166.782 157.775 149.782 -5.542 -2.357 0.036 TRP 1 CZ2 polymer 1 1 12 ? ? ? PRD_002424 C10 C10 C 0 1 Y N N 168.117 159.547 150.804 -5.880 -2.586 2.407 TRP 1 CZ3 polymer 1 1 13 ? ? ? PRD_002424 C11 C11 C 0 1 Y N N 167.866 158.174 150.585 -5.042 -2.611 1.301 TRP 1 CH2 polymer 1 1 14 ? ? ? PRD_002424 N3 N3 N 0 1 N N N 163.937 160.106 151.607 -8.291 0.884 0.681 ASN 2 N polymer 1 1 15 ? ? ? PRD_002424 C12 C12 C 0 1 N N S 163.172 159.021 152.284 -7.558 1.756 -0.235 ASN 2 CA polymer 1 1 16 ? ? ? PRD_002424 C13 C13 C 0 1 N N N 163.412 157.635 151.621 -6.095 1.395 -0.175 ASN 2 C polymer 1 1 17 ? ? ? PRD_002424 O2 O2 O 0 1 N N N 162.551 157.117 150.934 -5.359 2.050 0.539 ASN 2 O polymer 1 1 18 ? ? ? PRD_002424 C14 C14 C 0 1 N N N 163.427 159.031 153.815 -8.075 1.614 -1.664 ASN 2 CB polymer 1 1 19 ? ? ? PRD_002424 C15 C15 C 0 1 N N N 162.575 158.030 154.577 -7.401 2.633 -2.546 ASN 2 CG polymer 1 1 20 ? ? ? PRD_002424 O3 O3 O 0 1 N N N 161.650 157.423 154.085 -6.524 3.339 -2.095 ASN 2 OD1 polymer 1 1 21 ? ? ? PRD_002424 N4 N4 N 0 1 N N N 162.904 157.836 155.869 -7.774 2.760 -3.835 ASN 2 ND2 polymer 1 1 22 ? ? ? PRD_002424 C16 C16 C 0 1 N N N 164.780 154.627 152.447 -3.330 1.129 -1.259 UX8 3 C polymer 1 1 23 ? ? ? PRD_002424 C17 C17 C 0 1 N N S 164.929 155.643 151.304 -4.172 0.009 -0.693 UX8 3 CA polymer 1 1 24 ? ? ? PRD_002424 C18 C18 C 0 1 Y N N 166.476 154.132 150.003 -2.430 -1.737 -0.982 UX8 3 CG polymer 1 1 25 ? ? ? PRD_002424 C19 C19 C 0 1 Y N N 166.442 151.905 149.710 -0.307 -1.702 -0.110 UX8 3 CE2 polymer 1 1 26 ? ? ? PRD_002424 C20 C20 C 0 1 N N R 166.338 155.493 150.641 -3.836 -1.323 -1.340 UX8 3 CB polymer 1 1 27 ? ? ? PRD_002424 C21 C21 C 0 1 Y N N 165.921 153.855 148.752 -1.693 -2.685 -1.585 UX8 3 CD1 polymer 1 1 28 ? ? ? PRD_002424 C22 C22 C 0 1 Y N N 166.841 152.867 150.578 -1.605 -1.192 0.104 UX8 3 CD2 polymer 1 1 29 ? ? ? PRD_002424 C23 C23 C 0 1 Y N N 167.363 152.548 151.833 -1.811 -0.388 1.223 UX8 3 CE3 polymer 1 1 30 ? ? ? PRD_002424 C24 C24 C 0 1 Y N N 167.349 151.193 152.217 -0.754 0.142 1.901 UX8 3 CZ3 polymer 1 1 31 ? ? ? PRD_002424 C25 C25 C 0 1 Y N N 166.797 150.200 151.360 0.556 -0.195 1.552 UX8 3 CH2 polymer 1 1 32 ? ? ? PRD_002424 C26 C26 C 0 1 Y N N 166.386 150.560 150.062 0.769 -1.165 0.593 UX8 3 CZ2 polymer 1 1 33 ? ? ? PRD_002424 N5 N5 N 0 1 N N N 164.638 157.024 151.813 -5.588 0.365 -0.883 UX8 3 N polymer 1 1 34 ? ? ? PRD_002424 N6 N6 N 0 1 Y N N 165.926 152.464 148.572 -0.443 -2.722 -1.027 UX8 3 NE1 polymer 1 1 35 ? ? ? PRD_002424 O4 O4 O 0 1 N N N 165.266 154.824 153.541 -3.912 2.052 -1.787 UX8 3 O polymer 1 1 36 ? ? ? PRD_002424 O5 O5 O 0 1 N N N 166.469 156.456 149.569 -4.737 -2.371 -1.046 UX8 3 O9 polymer 1 1 37 ? ? ? PRD_002424 N7 N7 N 0 1 N N N 164.059 153.483 152.168 -2.002 1.150 -1.166 THR 4 N polymer 1 1 38 ? ? ? PRD_002424 C27 C27 C 0 1 N N S 163.764 152.403 153.163 -1.214 2.305 -0.741 THR 4 CA polymer 1 1 39 ? ? ? PRD_002424 C28 C28 C 0 1 N N N 163.920 151.013 152.513 0.134 1.836 -0.241 THR 4 C polymer 1 1 40 ? ? ? PRD_002424 O6 O6 O 0 1 N N N 163.395 150.750 151.445 0.679 0.958 -0.891 THR 4 O polymer 1 1 41 ? ? ? PRD_002424 C29 C29 C 0 1 N N R 162.318 152.495 153.712 -1.965 3.062 0.352 THR 4 CB polymer 1 1 42 ? ? ? PRD_002424 O7 O7 O 0 1 N N N 162.176 151.605 154.814 -3.283 3.374 -0.105 THR 4 OG1 polymer 1 1 43 ? ? ? PRD_002424 C30 C30 C 0 1 N N N 161.909 153.912 154.159 -2.054 2.190 1.607 THR 4 CG2 polymer 1 1 44 ? ? ? PRD_002424 N8 N8 N 0 1 N N N 164.681 150.080 153.187 0.730 2.343 0.843 LYS 5 N polymer 1 1 45 ? ? ? PRD_002424 C31 C31 C 0 1 N N S 165.067 148.758 152.595 1.946 1.833 1.473 LYS 5 CA polymer 1 1 46 ? ? ? PRD_002424 C32 C32 C 0 1 N N N 164.941 147.611 153.631 3.055 1.648 0.477 LYS 5 C polymer 1 1 47 ? ? ? PRD_002424 O8 O8 O 0 1 N N N 165.011 147.804 154.828 2.800 1.558 -0.706 LYS 5 O polymer 1 1 48 ? ? ? PRD_002424 C33 C33 C 0 1 N N N 166.473 148.788 151.871 1.678 0.527 2.237 LYS 5 CB polymer 1 1 49 ? ? ? PRD_002424 C34 C34 C 0 1 N N N 167.633 148.177 152.708 2.944 -0.325 2.293 LYS 5 CG polymer 1 1 50 ? ? ? PRD_002424 C35 C35 C 0 1 N N N 168.989 148.092 151.962 2.692 -1.554 3.170 LYS 5 CD polymer 1 1 51 ? ? ? PRD_002424 C36 C36 C 0 1 N N N 169.249 146.727 151.290 3.960 -2.408 3.226 LYS 5 CE polymer 1 1 52 ? ? ? PRD_002424 N9 N9 N 1 1 N N N 168.350 146.424 150.089 3.719 -3.588 4.067 LYS 5 NZ polymer 1 1 53 ? ? ? PRD_002424 N10 N10 N 0 1 N N N 164.735 146.353 153.098 4.334 1.581 0.896 ARG 6 N polymer 1 1 54 ? ? ? PRD_002424 C37 C37 C 0 1 N N S 164.628 145.070 153.866 5.416 1.400 -0.075 ARG 6 CA polymer 1 1 55 ? ? ? PRD_002424 C38 C38 C 0 1 N N N 165.875 144.766 154.767 6.698 1.952 0.492 ARG 6 C polymer 1 1 56 ? ? ? PRD_002424 O9 O9 O 0 1 N N N 166.948 145.306 154.573 6.708 2.447 1.599 ARG 6 O polymer 1 1 57 ? ? ? PRD_002424 C39 C39 C 0 1 N N N 163.231 144.951 154.515 5.589 -0.091 -0.373 ARG 6 CB polymer 1 1 58 ? ? ? PRD_002424 C40 C40 C 0 1 N N N 162.100 145.253 153.490 4.332 -0.623 -1.063 ARG 6 CG polymer 1 1 59 ? ? ? PRD_002424 C41 C41 C 0 1 N N N 160.723 144.644 153.836 4.506 -2.114 -1.360 ARG 6 CD polymer 1 1 60 ? ? ? PRD_002424 N11 N11 N 0 1 N N N 160.260 145.004 155.187 3.302 -2.624 -2.021 ARG 6 NE polymer 1 1 61 ? ? ? PRD_002424 C42 C42 C 0 1 N N N 159.718 146.146 155.600 3.227 -3.940 -2.385 ARG 6 CZ polymer 1 1 62 ? ? ? PRD_002424 N12 N12 N 0 1 N N N 158.989 146.153 156.698 4.248 -4.759 -2.139 ARG 6 NH1 polymer 1 1 63 ? ? ? PRD_002424 N13 N13 N 1 1 N N N 159.858 147.260 154.905 2.132 -4.403 -2.986 ARG 6 NH2 polymer 1 1 64 ? ? ? PRD_002424 N14 N14 N 0 1 N N N 165.782 143.748 155.699 7.834 1.894 -0.231 TRP 7 N polymer 1 1 65 ? ? ? PRD_002424 C43 C43 C 0 1 N N S 167.008 142.967 156.103 9.081 2.431 0.321 TRP 7 CA polymer 1 1 66 ? ? ? PRD_002424 C44 C44 C 0 1 N N N 166.734 141.511 156.550 9.154 3.911 0.050 TRP 7 C polymer 1 1 67 ? ? ? PRD_002424 O10 O10 O 0 1 N N N 167.345 140.612 155.996 8.257 4.462 -0.543 TRP 7 O polymer 1 1 68 ? ? ? PRD_002424 C45 C45 C 0 1 N N N 167.904 143.673 157.147 10.272 1.732 -0.338 TRP 7 CB polymer 1 1 69 ? ? ? PRD_002424 C46 C46 C 0 1 Y N N 167.238 144.217 158.380 10.267 0.272 0.035 TRP 7 CG polymer 1 1 70 ? ? ? PRD_002424 C47 C47 C 0 1 Y N N 167.088 145.587 158.529 10.946 -0.297 1.043 TRP 7 CD1 polymer 1 1 71 ? ? ? PRD_002424 C48 C48 C 0 1 Y N N 167.028 143.638 159.682 9.515 -0.795 -0.631 TRP 7 CD2 polymer 1 1 72 ? ? ? PRD_002424 N15 N15 N 0 1 Y N N 166.770 145.852 159.872 10.696 -1.642 1.074 TRP 7 NE1 polymer 1 1 73 ? ? ? PRD_002424 C49 C49 C 0 1 Y N N 166.774 144.660 160.538 9.824 -1.979 0.063 TRP 7 CE2 polymer 1 1 74 ? ? ? PRD_002424 C50 C50 C 0 1 Y N N 167.104 142.319 160.136 8.641 -0.832 -1.719 TRP 7 CE3 polymer 1 1 75 ? ? ? PRD_002424 C51 C51 C 0 1 Y N N 166.602 144.477 161.907 9.249 -3.178 -0.346 TRP 7 CZ2 polymer 1 1 76 ? ? ? PRD_002424 C52 C52 C 0 1 Y N N 166.905 142.084 161.513 8.088 -2.021 -2.104 TRP 7 CZ3 polymer 1 1 77 ? ? ? PRD_002424 C53 C53 C 0 1 Y N N 166.671 143.160 162.396 8.388 -3.192 -1.421 TRP 7 CH2 polymer 1 1 78 ? ? ? PRD_002424 O11 O11 O 0 1 N Y N 165.807 141.298 157.304 10.216 4.618 0.467 TRP 7 OXT polymer 1 1 79 ? ? ? PRD_002424 H1 H1 H 0 1 N N N 164.377 164.517 150.520 -9.627 1.048 3.523 TRP 1 H polymer 1 1 80 ? ? ? PRD_002424 H2 H2 H 0 1 N Y N 162.851 163.942 150.595 -10.010 -0.545 3.810 TRP 1 H2 polymer 1 1 81 ? ? ? PRD_002424 H3 H3 H 0 1 N N N 165.281 162.347 151.192 -11.335 0.371 1.989 TRP 1 HA polymer 1 1 82 ? ? ? PRD_002424 H4 H4 H 0 1 N N N 163.624 162.314 148.633 -10.303 -2.089 2.188 TRP 1 HB2 polymer 1 1 83 ? ? ? PRD_002424 H5 H5 H 0 1 N N N 165.310 162.901 148.831 -11.183 -1.573 0.731 TRP 1 HB3 polymer 1 1 84 ? ? ? PRD_002424 H6 H6 H 0 1 N N N 163.431 160.066 147.616 -9.795 -1.336 -1.487 TRP 1 HD1 polymer 1 1 85 ? ? ? PRD_002424 H7 H7 H 0 1 N N N 164.579 157.727 148.019 -7.379 -1.818 -2.142 TRP 1 HE1 polymer 1 1 86 ? ? ? PRD_002424 H8 H8 H 0 1 N N N 167.412 161.575 150.461 -7.849 -2.287 3.141 TRP 1 HE3 polymer 1 1 87 ? ? ? PRD_002424 H9 H9 H 0 1 N N N 168.976 159.850 151.385 -5.476 -2.802 3.386 TRP 1 HZ3 polymer 1 1 88 ? ? ? PRD_002424 H10 H10 H 0 1 N N N 168.507 157.430 151.035 -3.993 -2.832 1.426 TRP 1 HH2 polymer 1 1 89 ? ? ? PRD_002424 H11 H11 H 0 1 N N N 164.877 159.925 151.317 -7.778 0.227 1.193 ASN 2 H polymer 1 1 90 ? ? ? PRD_002424 H12 H12 H 0 1 N N N 162.104 159.247 152.147 -7.679 2.796 0.088 ASN 2 HA polymer 1 1 91 ? ? ? PRD_002424 H13 H13 H 0 1 N N N 164.486 158.794 153.993 -7.854 0.612 -2.032 ASN 2 HB2 polymer 1 1 92 ? ? ? PRD_002424 H14 H14 H 0 1 N N N 163.207 160.038 154.198 -9.153 1.777 -1.678 ASN 2 HB3 polymer 1 1 93 ? ? ? PRD_002424 H15 H15 H 0 0 N N N 162.384 157.189 156.426 -8.476 2.196 -4.195 ASN 2 HD21 polymer 1 1 94 ? ? ? PRD_002424 H16 H16 H 0 0 N N N 163.669 158.339 156.271 -7.340 3.416 -4.402 ASN 2 HD22 polymer 1 1 95 ? ? ? PRD_002424 H17 H17 H 0 1 N N N 164.179 155.396 150.538 -4.001 -0.054 0.385 UX8 3 HA polymer 1 1 96 ? ? ? PRD_002424 H18 H18 H 0 1 N N N 167.119 155.637 151.402 -3.846 -1.164 -2.440 UX8 3 HB2 polymer 1 1 97 ? ? ? PRD_002424 H19 H19 H 0 1 N N N 165.552 154.585 148.046 -2.038 -3.322 -2.386 UX8 3 HD1 polymer 1 1 98 ? ? ? PRD_002424 H20 H20 H 0 1 N N N 167.762 153.311 152.485 -2.812 -0.197 1.582 UX8 3 HE3 polymer 1 1 99 ? ? ? PRD_002424 H21 H21 H 0 1 N N N 167.762 150.904 153.172 -0.924 0.810 2.733 UX8 3 HZ3 polymer 1 1 100 ? ? ? PRD_002424 H22 H22 H 0 1 N N N 166.038 149.815 149.362 1.761 -1.523 0.360 UX8 3 HZ2 polymer 1 1 101 ? ? ? PRD_002424 H23 H23 H 0 1 N N N 165.353 157.519 152.307 -6.126 -0.143 -1.506 UX8 3 H polymer 1 1 102 ? ? ? PRD_002424 H24 H24 H 0 1 N N N 165.610 151.971 147.761 0.246 -3.370 -1.242 UX8 3 HE1 polymer 1 1 103 ? ? ? PRD_002424 H25 H25 H 0 1 N N N 163.710 153.368 151.238 -1.510 0.347 -1.433 THR 4 H polymer 1 1 104 ? ? ? PRD_002424 H26 H26 H 0 1 N N N 164.467 152.481 154.006 -1.060 2.966 -1.597 THR 4 HA polymer 1 1 105 ? ? ? PRD_002424 H27 H27 H 0 1 N N N 161.635 152.187 152.906 -1.434 3.984 0.587 THR 4 HB polymer 1 1 106 ? ? ? PRD_002424 H28 H28 H 0 1 N N N 161.290 151.659 155.153 -3.819 3.856 0.540 THR 4 HG1 polymer 1 1 107 ? ? ? PRD_002424 H29 H29 H 0 0 N N N 160.875 153.895 154.534 -2.621 2.716 2.375 THR 4 HG21 polymer 1 1 108 ? ? ? PRD_002424 H30 H30 H 0 0 N N N 162.583 154.253 154.958 -2.554 1.253 1.363 THR 4 HG22 polymer 1 1 109 ? ? ? PRD_002424 H31 H31 H 0 0 N N N 161.977 154.600 153.304 -1.050 1.981 1.975 THR 4 HG23 polymer 1 1 110 ? ? ? PRD_002424 H32 H32 H 0 1 N N N 164.989 150.296 154.113 0.352 3.149 1.259 LYS 5 H polymer 1 1 111 ? ? ? PRD_002424 H33 H33 H 0 1 N N N 164.331 148.539 151.808 2.280 2.588 2.210 LYS 5 HA polymer 1 1 112 ? ? ? PRD_002424 H34 H34 H 0 1 N N N 166.368 148.151 150.980 1.370 0.772 3.263 LYS 5 HB3 polymer 1 1 113 ? ? ? PRD_002424 H35 H35 H 0 1 N N N 167.773 148.798 153.605 3.211 -0.646 1.286 LYS 5 HG2 polymer 1 1 114 ? ? ? PRD_002424 H36 H36 H 0 1 N N N 167.341 147.160 153.008 3.759 0.262 2.716 LYS 5 HG3 polymer 1 1 115 ? ? ? PRD_002424 H37 H37 H 0 1 N N N 169.006 148.870 151.184 2.425 -1.234 4.177 LYS 5 HD2 polymer 1 1 116 ? ? ? PRD_002424 H38 H38 H 0 1 N N N 169.795 148.281 152.686 1.877 -2.141 2.747 LYS 5 HD3 polymer 1 1 117 ? ? ? PRD_002424 H39 H39 H 0 1 N N N 170.295 146.707 150.949 4.227 -2.729 2.219 LYS 5 HE2 polymer 1 1 118 ? ? ? PRD_002424 H40 H40 H 0 1 N N N 169.093 145.940 152.042 4.776 -1.821 3.648 LYS 5 HE3 polymer 1 1 119 ? ? ? PRD_002424 H41 H41 H 0 1 N N N 168.583 145.526 149.715 3.472 -3.292 4.999 LYS 5 HZ1 polymer 1 1 120 ? ? ? PRD_002424 H42 H42 H 0 1 N N N 167.393 146.425 150.380 2.964 -4.132 3.676 LYS 5 HZ2 polymer 1 1 121 ? ? ? PRD_002424 H43 H43 H 0 1 N N N 168.486 147.123 149.387 4.555 -4.152 4.104 LYS 5 HZ3 polymer 1 1 122 ? ? ? PRD_002424 H44 H44 H 0 1 N N N 164.649 146.292 152.104 4.539 1.653 1.842 ARG 6 H polymer 1 1 123 ? ? ? PRD_002424 H45 H45 H 0 1 N N N 164.645 144.279 153.102 5.169 1.928 -0.996 ARG 6 HA polymer 1 1 124 ? ? ? PRD_002424 H46 H46 H 0 1 N N N 163.101 143.929 154.900 6.450 -0.233 -1.026 ARG 6 HB2 polymer 1 1 125 ? ? ? PRD_002424 H47 H47 H 0 1 N N N 163.161 145.668 155.347 5.748 -0.632 0.560 ARG 6 HB3 polymer 1 1 126 ? ? ? PRD_002424 H48 H48 H 0 1 N N N 161.983 146.345 153.423 3.471 -0.481 -0.409 ARG 6 HG2 polymer 1 1 127 ? ? ? PRD_002424 H49 H49 H 0 1 N N N 162.412 144.857 152.512 4.173 -0.083 -1.996 ARG 6 HG3 polymer 1 1 128 ? ? ? PRD_002424 H50 H50 H 0 1 N N N 159.986 145.006 153.104 5.366 -2.256 -2.014 ARG 6 HD2 polymer 1 1 129 ? ? ? PRD_002424 H51 H51 H 0 1 N N N 160.797 143.548 153.771 4.665 -2.655 -0.427 ARG 6 HD3 polymer 1 1 130 ? ? ? PRD_002424 H52 H52 H 0 1 N N N 160.367 144.297 155.886 2.558 -2.028 -2.201 ARG 6 HE polymer 1 1 131 ? ? ? PRD_002424 H53 H53 H 0 0 N N N 158.547 146.998 156.999 5.045 -4.421 -1.701 ARG 6 HH11 polymer 1 1 132 ? ? ? PRD_002424 H54 H54 H 0 0 N N N 158.878 145.313 157.230 4.195 -5.692 -2.397 ARG 6 HH12 polymer 1 1 133 ? ? ? PRD_002424 H55 H55 H 0 0 N N N 159.413 148.101 155.213 1.388 -3.807 -3.165 ARG 6 HH21 polymer 1 1 134 ? ? ? PRD_002424 H56 H56 H 0 0 N N N 160.409 147.263 154.071 2.078 -5.337 -3.244 ARG 6 HH22 polymer 1 1 135 ? ? ? PRD_002424 H57 H57 H 0 1 N N N 164.896 143.528 156.108 7.826 1.498 -1.116 TRP 7 H polymer 1 1 136 ? ? ? PRD_002424 H58 H58 H 0 1 N N N 167.624 142.884 155.196 9.107 2.257 1.396 TRP 7 HA polymer 1 1 137 ? ? ? PRD_002424 H59 H59 H 0 1 N N N 168.662 142.947 157.475 10.198 1.831 -1.421 TRP 7 HB2 polymer 1 1 138 ? ? ? PRD_002424 H60 H60 H 0 1 N N N 168.398 144.515 156.641 11.199 2.192 0.006 TRP 7 HB3 polymer 1 1 139 ? ? ? PRD_002424 H61 H61 H 0 1 N N N 167.197 146.324 157.747 11.595 0.228 1.728 TRP 7 HD1 polymer 1 1 140 ? ? ? PRD_002424 H62 H62 H 0 1 N N N 166.576 146.750 160.268 11.074 -2.264 1.715 TRP 7 HE1 polymer 1 1 141 ? ? ? PRD_002424 H63 H63 H 0 1 N N N 167.308 141.506 159.455 8.401 0.075 -2.253 TRP 7 HE3 polymer 1 1 142 ? ? ? PRD_002424 H64 H64 H 0 1 N N N 166.423 145.313 162.567 9.478 -4.095 0.177 TRP 7 HZ2 polymer 1 1 143 ? ? ? PRD_002424 H65 H65 H 0 1 N N N 166.932 141.074 161.894 7.411 -2.050 -2.945 TRP 7 HZ3 polymer 1 1 144 ? ? ? PRD_002424 H66 H66 H 0 1 N N N 166.544 142.971 163.452 7.943 -4.124 -1.737 TRP 7 HH2 polymer 1 1 145 ? ? ? PRD_002424 H67 H67 H 0 1 N Y N 165.662 140.362 157.372 10.218 5.565 0.270 TRP 7 HXT polymer 1 1 146 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002424 N1 C1 SING N N 1 PRD_002424 N1 H1 SING N N 2 PRD_002424 N1 H2 SING N N 3 PRD_002424 C1 C2 SING N N 4 PRD_002424 C1 C3 SING N N 5 PRD_002424 C1 H3 SING N N 6 PRD_002424 C2 O1 DOUB N N 7 PRD_002424 C3 C4 SING N N 8 PRD_002424 C3 H4 SING N N 9 PRD_002424 C3 H5 SING N N 10 PRD_002424 C4 C5 DOUB Y N 11 PRD_002424 C4 C6 SING Y N 12 PRD_002424 C5 N2 SING Y N 13 PRD_002424 C5 H6 SING N N 14 PRD_002424 C6 C7 DOUB Y N 15 PRD_002424 C6 C8 SING Y N 16 PRD_002424 N2 C7 SING Y N 17 PRD_002424 N2 H7 SING N N 18 PRD_002424 C7 C9 SING Y N 19 PRD_002424 C8 C10 DOUB Y N 20 PRD_002424 C8 H8 SING N N 21 PRD_002424 C9 C11 DOUB Y N 22 PRD_002424 C10 C11 SING Y N 23 PRD_002424 C10 H9 SING N N 24 PRD_002424 C11 H10 SING N N 25 PRD_002424 N3 C12 SING N N 26 PRD_002424 N3 H11 SING N N 27 PRD_002424 C12 C13 SING N N 28 PRD_002424 C12 C14 SING N N 29 PRD_002424 C12 H12 SING N N 30 PRD_002424 C13 O2 DOUB N N 31 PRD_002424 C14 C15 SING N N 32 PRD_002424 C14 H13 SING N N 33 PRD_002424 C14 H14 SING N N 34 PRD_002424 C15 O3 DOUB N N 35 PRD_002424 C15 N4 SING N N 36 PRD_002424 N4 H15 SING N N 37 PRD_002424 N4 H16 SING N N 38 PRD_002424 C21 N6 SING Y N 39 PRD_002424 C21 C18 DOUB Y N 40 PRD_002424 N6 C19 SING Y N 41 PRD_002424 O5 C20 SING N N 42 PRD_002424 C18 C20 SING N N 43 PRD_002424 C18 C22 SING Y N 44 PRD_002424 C19 C26 DOUB Y N 45 PRD_002424 C19 C22 SING Y N 46 PRD_002424 C26 C25 SING Y N 47 PRD_002424 C20 C17 SING N N 48 PRD_002424 C22 C23 DOUB Y N 49 PRD_002424 C17 N5 SING N N 50 PRD_002424 C17 C16 SING N N 51 PRD_002424 C25 C24 DOUB Y N 52 PRD_002424 C23 C24 SING Y N 53 PRD_002424 C16 O4 DOUB N N 54 PRD_002424 C17 H17 SING N N 55 PRD_002424 C20 H18 SING N N 56 PRD_002424 C21 H19 SING N N 57 PRD_002424 C23 H20 SING N N 58 PRD_002424 C24 H21 SING N N 59 PRD_002424 C26 H22 SING N N 60 PRD_002424 N5 H23 SING N N 61 PRD_002424 N6 H24 SING N N 62 PRD_002424 N7 C27 SING N N 63 PRD_002424 N7 H25 SING N N 64 PRD_002424 C27 C28 SING N N 65 PRD_002424 C27 C29 SING N N 66 PRD_002424 C27 H26 SING N N 67 PRD_002424 C28 O6 DOUB N N 68 PRD_002424 C29 O7 SING N N 69 PRD_002424 C29 C30 SING N N 70 PRD_002424 C29 H27 SING N N 71 PRD_002424 O7 H28 SING N N 72 PRD_002424 C30 H29 SING N N 73 PRD_002424 C30 H30 SING N N 74 PRD_002424 C30 H31 SING N N 75 PRD_002424 N8 C31 SING N N 76 PRD_002424 N8 H32 SING N N 77 PRD_002424 C31 C32 SING N N 78 PRD_002424 C31 C33 SING N N 79 PRD_002424 C31 H33 SING N N 80 PRD_002424 C32 O8 DOUB N N 81 PRD_002424 C33 C34 SING N N 82 PRD_002424 C33 H34 SING N N 83 PRD_002424 C34 C35 SING N N 84 PRD_002424 C34 H35 SING N N 85 PRD_002424 C34 H36 SING N N 86 PRD_002424 C35 C36 SING N N 87 PRD_002424 C35 H37 SING N N 88 PRD_002424 C35 H38 SING N N 89 PRD_002424 C36 N9 SING N N 90 PRD_002424 C36 H39 SING N N 91 PRD_002424 C36 H40 SING N N 92 PRD_002424 N9 H41 SING N N 93 PRD_002424 N9 H42 SING N N 94 PRD_002424 N9 H43 SING N N 95 PRD_002424 N10 C37 SING N N 96 PRD_002424 N10 H44 SING N N 97 PRD_002424 C37 C38 SING N N 98 PRD_002424 C37 C39 SING N N 99 PRD_002424 C37 H45 SING N N 100 PRD_002424 C38 O9 DOUB N N 101 PRD_002424 C39 C40 SING N N 102 PRD_002424 C39 H46 SING N N 103 PRD_002424 C39 H47 SING N N 104 PRD_002424 C40 C41 SING N N 105 PRD_002424 C40 H48 SING N N 106 PRD_002424 C40 H49 SING N N 107 PRD_002424 C41 N11 SING N N 108 PRD_002424 C41 H50 SING N N 109 PRD_002424 C41 H51 SING N N 110 PRD_002424 N11 C42 SING N N 111 PRD_002424 N11 H52 SING N N 112 PRD_002424 C42 N12 SING N N 113 PRD_002424 C42 N13 DOUB N N 114 PRD_002424 N12 H53 SING N N 115 PRD_002424 N12 H54 SING N N 116 PRD_002424 N13 H55 SING N N 117 PRD_002424 N13 H56 SING N N 118 PRD_002424 N14 C43 SING N N 119 PRD_002424 N14 H57 SING N N 120 PRD_002424 C43 C44 SING N N 121 PRD_002424 C43 C45 SING N N 122 PRD_002424 C43 H58 SING N N 123 PRD_002424 C44 O10 DOUB N N 124 PRD_002424 C44 O11 SING N N 125 PRD_002424 C45 C46 SING N N 126 PRD_002424 C45 H59 SING N N 127 PRD_002424 C45 H60 SING N N 128 PRD_002424 C46 C47 DOUB Y N 129 PRD_002424 C46 C48 SING Y N 130 PRD_002424 C47 N15 SING Y N 131 PRD_002424 C47 H61 SING N N 132 PRD_002424 C48 C49 DOUB Y N 133 PRD_002424 C48 C50 SING Y N 134 PRD_002424 N15 C49 SING Y N 135 PRD_002424 N15 H62 SING N N 136 PRD_002424 C49 C51 SING Y N 137 PRD_002424 C50 C52 DOUB Y N 138 PRD_002424 C50 H63 SING N N 139 PRD_002424 C51 C53 DOUB Y N 140 PRD_002424 C51 H64 SING N N 141 PRD_002424 C52 C53 SING Y N 142 PRD_002424 C52 H65 SING N N 143 PRD_002424 C53 H66 SING N N 144 PRD_002424 O11 H67 SING N N 145 PRD_002424 C2 N3 SING N N 146 PRD_002424 C9 O5 SING N N 147 PRD_002424 C13 N5 SING N N 148 PRD_002424 C16 N7 SING N N 149 PRD_002424 C25 C33 SING N N 150 PRD_002424 C28 N8 SING N N 151 PRD_002424 C32 N10 SING N N 152 PRD_002424 C38 N14 SING N N 153 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002424 InChI InChI 1.06 "InChI=1S/C53H65N15O11/c1-24(69)41-49(74)67-43(50(75)63-35(11-6-16-59-53(57)58)47(72)65-38(52(77)78)19-27-21-60-34-10-3-2-7-28(27)34)29(9-5-15-54)25-13-14-31-32(23-61-36(31)18-25)45-44(51(76)66-41)68-48(73)37(20-40(56)70)64-46(71)33(55)17-26-22-62-42-30(26)8-4-12-39(42)79-45/h2-4,7-8,10,12-14,18,21-24,29,33,35,37-38,41,43-45,60-62,69H,5-6,9,11,15-17,19-20,54-55H2,1H3,(H2,56,70)(H,63,75)(H,64,71)(H,65,72)(H,66,76)(H,67,74)(H,68,73)(H,77,78)(H4,57,58,59)/p+2/t24-,29+,33+,35+,37+,38-,41-,43-,44-,45+/m0/s1" PRD_002424 InChIKey InChI 1.06 VGHHVOGSGVMNKK-BTPZIDHDSA-P PRD_002424 SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)[C@@H]1NC(=O)[C@H]2NC(=O)[C@@H](CC(N)=O)NC(=O)[C@H](N)Cc3c[nH]c4c(O[C@@H]2c5c[nH]c6cc(ccc56)[C@@H](CCC[NH3+])[C@H](NC1=O)C(=O)N[C@H](CCCNC(N)=[NH2+])C(=O)N[C@@H](Cc7c[nH]c8ccccc78)C(O)=O)cccc34" PRD_002424 SMILES CACTVS 3.385 "C[CH](O)[CH]1NC(=O)[CH]2NC(=O)[CH](CC(N)=O)NC(=O)[CH](N)Cc3c[nH]c4c(O[CH]2c5c[nH]c6cc(ccc56)[CH](CCC[NH3+])[CH](NC1=O)C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH](Cc7c[nH]c8ccccc78)C(O)=O)cccc34" PRD_002424 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]([C@H]1C(=O)N[C@@H](C(c2ccc3c(c2)[nH]cc3[C@@H]4[C@@H](C(=O)N1)NC(=O)[C@H](NC(=O)[C@@H](Cc5c[nH]c6c5cccc6O4)N)CC(=O)N)CCC[NH3+])C(=O)N[C@H](CCCNC(=[NH2+])N)C(=O)N[C@@H](Cc7c[nH]c8c7cccc8)C(=O)O)O" PRD_002424 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C1C(=O)NC(C(c2ccc3c(c2)[nH]cc3C4C(C(=O)N1)NC(=O)C(NC(=O)C(Cc5c[nH]c6c5cccc6O4)N)CC(=O)N)CCC[NH3+])C(=O)NC(CCCNC(=[NH2+])N)C(=O)NC(Cc7c[nH]c8c7cccc8)C(=O)O)O" # _pdbx_chem_comp_identifier.comp_id PRD_002424 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "3-[(5~{R},17~{R},20~{R},23~{S},26~{S},29~{S})-29-[[(2~{R})-5-[[azaniumylidene(azanyl)methyl]amino]-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-pentan-2-yl]carbamoyl]-17-azanyl-20-(2-azanyl-2-oxidanylidene-ethyl)-26-[(1~{S})-1-oxidanylethyl]-18,21,24,27-tetrakis(oxidanylidene)-6-oxa-2,13,19,22,25,28-hexazahexacyclo[29.3.1.0^{4,34}.0^{5,23}.0^{7,12}.0^{11,15}]pentatriaconta-1(35),3,7,9,11,14,31,33-octaen-30-yl]propylazanium" #