data_PRDCC_002431 # _chem_comp.id PRD_002431 _chem_comp.name "Cyclic tetraadenosine monophosphate (cA4)" _chem_comp.formula "C40 H48 N20 O24 P4" _chem_comp.formula_weight 1316.824 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002431 P1 P1 P 0 1 N N N -24.865 34.397 -11.026 4.632 1.636 0.130 A 1 P polymer 1 1 1 ? ? ? PRD_002431 O1 O1 O 0 1 N N N -25.630 35.584 -11.487 4.749 1.758 1.600 A 1 OP1 polymer 1 1 2 ? ? ? PRD_002431 O2 O2 O 0 1 N N N -25.573 33.255 -10.396 6.040 2.012 -0.553 A 1 OP2 polymer 1 1 3 ? ? ? PRD_002431 O3 O3 O 0 1 N N N -24.050 33.840 -12.274 4.238 0.123 -0.252 A 1 "O5'" polymer 1 1 4 ? ? ? PRD_002431 C1 C1 C 0 1 N N N -23.641 34.719 -13.315 4.730 -1.015 0.459 A 1 "C5'" polymer 1 1 5 ? ? ? PRD_002431 C2 C2 C 0 1 N N R -24.338 34.409 -14.616 4.730 -2.234 -0.463 A 1 "C4'" polymer 1 1 6 ? ? ? PRD_002431 O4 O4 O 0 1 N N N -25.544 33.633 -14.357 6.074 -2.596 -0.788 A 1 "O4'" polymer 1 1 7 ? ? ? PRD_002431 C3 C3 C 0 1 N N S -24.785 35.634 -15.417 4.090 -3.432 0.256 A 1 "C3'" polymer 1 1 8 ? ? ? PRD_002431 O5 O5 O 0 1 N N N -24.658 35.361 -16.808 2.760 -3.654 -0.217 A 1 "O3'" polymer 1 1 9 ? ? ? PRD_002431 C4 C4 C 0 1 N N R -26.264 35.739 -15.068 4.992 -4.632 -0.091 A 1 "C2'" polymer 1 1 10 ? ? ? PRD_002431 O6 O6 O 0 1 N N N -27.048 36.426 -16.020 4.322 -5.514 -0.994 A 1 "O2'" polymer 1 1 11 ? ? ? PRD_002431 C5 C5 C 0 1 N N R -26.645 34.268 -14.978 6.227 -4.015 -0.763 A 1 "C1'" polymer 1 1 12 ? ? ? PRD_002431 N1 N1 N 0 1 Y N N -27.865 34.002 -14.214 7.429 -4.367 -0.004 A 1 N9 polymer 1 1 13 ? ? ? PRD_002431 C6 C6 C 0 1 Y N N -28.273 34.522 -13.012 8.034 -3.604 0.950 A 1 C8 polymer 1 1 14 ? ? ? PRD_002431 N2 N2 N 0 1 Y N N -29.443 34.073 -12.618 9.078 -4.223 1.419 A 1 N7 polymer 1 1 15 ? ? ? PRD_002431 C7 C7 C 0 1 Y N N -29.831 33.208 -13.633 9.210 -5.420 0.797 A 1 C5 polymer 1 1 16 ? ? ? PRD_002431 C8 C8 C 0 1 Y N N -30.972 32.409 -13.826 10.122 -6.485 0.887 A 1 C6 polymer 1 1 17 ? ? ? PRD_002431 N3 N3 N 0 1 N N N -31.989 32.343 -12.964 11.181 -6.437 1.776 A 1 N6 polymer 1 1 18 ? ? ? PRD_002431 N4 N4 N 0 1 Y N N -31.037 31.666 -14.954 9.942 -7.541 0.100 A 1 N1 polymer 1 1 19 ? ? ? PRD_002431 C9 C9 C 0 1 Y N N -30.021 31.724 -15.823 8.933 -7.596 -0.750 A 1 C2 polymer 1 1 20 ? ? ? PRD_002431 N5 N5 N 0 1 Y N N -28.900 32.436 -15.753 8.056 -6.622 -0.869 A 1 N3 polymer 1 1 21 ? ? ? PRD_002431 C10 C10 C 0 1 Y N N -28.868 33.161 -14.623 8.150 -5.529 -0.119 A 1 C4 polymer 1 1 22 ? ? ? PRD_002431 P2 P2 P 0 1 N N N -24.145 36.509 -17.805 1.614 -4.325 0.694 A 2 P polymer 1 1 23 ? ? ? PRD_002431 O7 O7 O 0 1 N N N -24.463 37.826 -17.195 1.455 -3.542 1.940 A 2 OP1 polymer 1 1 24 ? ? ? PRD_002431 O8 O8 O 0 1 N N N -24.655 36.185 -19.163 2.037 -5.834 1.061 A 2 OP2 polymer 1 1 25 ? ? ? PRD_002431 O9 O9 O 0 1 N N N -22.564 36.318 -17.811 0.219 -4.343 -0.107 A 2 "O5'" polymer 1 1 26 ? ? ? PRD_002431 C11 C11 C 0 1 N N N -21.970 35.248 -18.537 -0.984 -4.879 0.451 A 2 "C5'" polymer 1 1 27 ? ? ? PRD_002431 C12 C12 C 0 1 N N R -21.227 34.287 -17.641 -2.130 -4.735 -0.551 A 2 "C4'" polymer 1 1 28 ? ? ? PRD_002431 O10 O10 O 0 1 N N N -20.731 33.197 -18.460 -2.533 -6.025 -1.012 A 2 "O4'" polymer 1 1 29 ? ? ? PRD_002431 C13 C13 C 0 1 N N S -20.007 34.865 -16.935 -3.341 -4.085 0.136 A 2 "C3'" polymer 1 1 30 ? ? ? PRD_002431 O11 O11 O 0 1 N N N -19.788 34.140 -15.724 -3.495 -2.732 -0.295 A 2 "O3'" polymer 1 1 31 ? ? ? PRD_002431 C14 C14 C 0 1 N N R -18.888 34.571 -17.928 -4.551 -4.929 -0.304 A 2 "C2'" polymer 1 1 32 ? ? ? PRD_002431 O12 O12 O 0 1 N N N -17.593 34.528 -17.368 -5.419 -4.156 -1.135 A 2 "O2'" polymer 1 1 33 ? ? ? PRD_002431 C15 C15 C 0 1 N N R -19.314 33.213 -18.487 -3.955 -6.100 -1.099 A 2 "C1'" polymer 1 1 34 ? ? ? PRD_002431 N6 N6 N 0 1 Y N N -18.908 32.989 -19.879 -4.418 -7.369 -0.531 A 2 N9 polymer 1 1 35 ? ? ? PRD_002431 C16 C16 C 0 1 Y N N -18.266 31.892 -20.396 -3.755 -8.134 0.381 A 2 C8 polymer 1 1 36 ? ? ? PRD_002431 N7 N7 N 0 1 Y N N -18.043 31.959 -21.685 -4.456 -9.194 0.665 A 2 N7 polymer 1 1 37 ? ? ? PRD_002431 C17 C17 C 0 1 Y N N -18.577 33.186 -22.049 -5.609 -9.175 -0.045 A 2 C5 polymer 1 1 38 ? ? ? PRD_002431 C18 C18 C 0 1 Y N N -18.655 33.847 -23.288 -6.721 -10.029 -0.146 A 2 C6 polymer 1 1 39 ? ? ? PRD_002431 N8 N8 N 0 1 N N N -18.176 33.339 -24.425 -6.788 -11.196 0.594 A 2 N6 polymer 1 1 40 ? ? ? PRD_002431 N9 N9 N 0 1 Y N N -19.249 35.060 -23.321 -7.708 -9.689 -0.969 A 2 N1 polymer 1 1 41 ? ? ? PRD_002431 C19 C19 C 0 1 Y N N -19.725 35.565 -22.177 -7.653 -8.576 -1.679 A 2 C2 polymer 1 1 42 ? ? ? PRD_002431 N10 N10 N 0 1 Y N N -19.713 35.038 -20.954 -6.633 -7.748 -1.617 A 2 N3 polymer 1 1 43 ? ? ? PRD_002431 C20 C20 C 0 1 Y N N -19.116 33.832 -20.951 -5.602 -8.001 -0.816 A 2 C4 polymer 1 1 44 ? ? ? PRD_002431 P3 P3 P 0 1 N N N -18.862 34.745 -14.558 -4.612 -1.742 0.308 A 3 P polymer 1 1 45 ? ? ? PRD_002431 O13 O13 O 0 1 N N N -17.743 35.483 -15.197 -4.631 -1.861 1.783 A 3 OP1 polymer 1 1 46 ? ? ? PRD_002431 O14 O14 O 0 1 N N N -18.573 33.654 -13.592 -6.056 -2.140 -0.281 A 3 OP2 polymer 1 1 47 ? ? ? PRD_002431 O15 O15 O 0 1 N N N -19.790 35.807 -13.820 -4.266 -0.224 -0.102 A 3 "O5'" polymer 1 1 48 ? ? ? PRD_002431 C21 C21 C 0 1 N N N -20.058 35.687 -12.428 -4.780 0.910 0.600 A 3 "C5'" polymer 1 1 49 ? ? ? PRD_002431 C22 C22 C 0 1 N N R -19.492 36.839 -11.629 -4.773 2.129 -0.322 A 3 "C4'" polymer 1 1 50 ? ? ? PRD_002431 O16 O16 O 0 1 N N N -18.063 36.650 -11.425 -6.115 2.537 -0.599 A 3 "O4'" polymer 1 1 51 ? ? ? PRD_002431 C23 C23 C 0 1 N N S -19.663 38.232 -12.240 -4.064 3.304 0.369 A 3 "C3'" polymer 1 1 52 ? ? ? PRD_002431 O17 O17 O 0 1 N N N -19.977 39.169 -11.211 -2.762 3.499 -0.184 A 3 "O3'" polymer 1 1 53 ? ? ? PRD_002431 C24 C24 C 0 1 N N R -18.273 38.538 -12.791 -4.956 4.528 0.086 A 3 "C2'" polymer 1 1 54 ? ? ? PRD_002431 O18 O18 O 0 1 N N N -17.972 39.914 -12.888 -4.275 5.453 -0.765 A 3 "O2'" polymer 1 1 55 ? ? ? PRD_002431 C25 C25 C 0 1 N N R -17.380 37.836 -11.774 -6.195 3.962 -0.623 A 3 "C1'" polymer 1 1 56 ? ? ? PRD_002431 N11 N11 N 0 1 Y N N -16.041 37.501 -12.274 -7.407 4.401 0.073 A 3 N9 polymer 1 1 57 ? ? ? PRD_002431 C26 C26 C 0 1 Y N N -15.696 36.960 -13.489 -8.089 3.702 1.024 A 3 C8 polymer 1 1 58 ? ? ? PRD_002431 N12 N12 N 0 1 Y N N -14.404 36.792 -13.649 -9.117 4.390 1.428 A 3 N7 polymer 1 1 59 ? ? ? PRD_002431 C27 C27 C 0 1 Y N N -13.854 37.259 -12.462 -9.160 5.570 0.765 A 3 C5 polymer 1 1 60 ? ? ? PRD_002431 C28 C28 C 0 1 Y N N -12.527 37.356 -11.997 -10.017 6.683 0.784 A 3 C6 polymer 1 1 61 ? ? ? PRD_002431 N13 N13 N 0 1 N N N -11.460 36.973 -12.702 -11.114 6.719 1.628 A 3 N6 polymer 1 1 62 ? ? ? PRD_002431 N14 N14 N 0 1 Y N N -12.329 37.871 -10.762 -9.751 7.701 -0.028 A 3 N1 polymer 1 1 63 ? ? ? PRD_002431 C29 C29 C 0 1 Y N N -13.395 38.259 -10.053 -8.707 7.676 -0.836 A 3 C2 polymer 1 1 64 ? ? ? PRD_002431 N15 N15 N 0 1 Y N N -14.685 38.217 -10.379 -7.877 6.655 -0.888 A 3 N3 polymer 1 1 65 ? ? ? PRD_002431 C30 C30 C 0 1 Y N N -14.851 37.702 -11.610 -8.060 5.594 -0.108 A 3 C4 polymer 1 1 66 ? ? ? PRD_002431 P4 P4 P 0 1 N N N -21.458 39.770 -11.168 -1.701 4.549 0.416 A 4 P polymer 1 1 67 ? ? ? PRD_002431 O19 O19 O 0 1 N N N -21.802 39.927 -12.605 -1.695 4.455 1.893 A 4 OP1 polymer 1 1 68 ? ? ? PRD_002431 O20 O20 O 0 1 N N N -21.547 40.938 -10.256 -2.116 6.041 -0.024 A 4 OP2 polymer 1 1 69 ? ? ? PRD_002431 O21 O21 O 0 1 N N N -22.364 38.601 -10.572 -0.231 4.214 -0.148 A 4 "O5'" polymer 1 1 70 ? ? ? PRD_002431 C31 C31 C 0 1 N N N -22.233 38.192 -9.214 0.967 4.706 0.457 A 4 "C5'" polymer 1 1 71 ? ? ? PRD_002431 C32 C32 C 0 1 N N R -22.431 36.704 -9.063 2.113 4.644 -0.553 A 4 "C4'" polymer 1 1 72 ? ? ? PRD_002431 O22 O22 O 0 1 N N N -22.181 36.322 -7.681 2.495 5.968 -0.935 A 4 "O4'" polymer 1 1 73 ? ? ? PRD_002431 C33 C33 C 0 1 N N S -23.831 36.192 -9.402 3.339 3.975 0.087 A 4 "C3'" polymer 1 1 74 ? ? ? PRD_002431 O23 O23 O 0 1 N N N -23.730 34.903 -10.006 3.493 2.641 -0.401 A 4 "O3'" polymer 1 1 75 ? ? ? PRD_002431 C34 C34 C 0 1 N N R -24.486 36.067 -8.029 4.536 4.845 -0.340 A 4 "C2'" polymer 1 1 76 ? ? ? PRD_002431 O24 O24 O 0 1 N N N -25.549 35.141 -7.963 5.388 4.117 -1.228 A 4 "O2'" polymer 1 1 77 ? ? ? PRD_002431 C35 C35 C 0 1 N N R -23.304 35.632 -7.168 3.914 6.049 -1.064 A 4 "C1'" polymer 1 1 78 ? ? ? PRD_002431 N16 N16 N 0 1 Y N N -23.443 35.955 -5.745 4.396 7.292 -0.457 A 4 N9 polymer 1 1 79 ? ? ? PRD_002431 C36 C36 C 0 1 Y N N -23.424 35.069 -4.696 3.762 8.017 0.508 A 4 C8 polymer 1 1 80 ? ? ? PRD_002431 N17 N17 N 0 1 Y N N -23.573 35.629 -3.522 4.471 9.064 0.816 A 4 N7 polymer 1 1 81 ? ? ? PRD_002431 C37 C37 C 0 1 Y N N -23.702 36.978 -3.814 5.601 9.078 0.069 A 4 C5 polymer 1 1 82 ? ? ? PRD_002431 C38 C38 C 0 1 Y N N -23.889 38.104 -2.994 6.709 9.937 -0.030 A 4 C6 polymer 1 1 83 ? ? ? PRD_002431 N18 N18 N 0 1 N N N -23.980 38.039 -1.664 6.799 11.071 0.757 A 4 N6 polymer 1 1 84 ? ? ? PRD_002431 N19 N19 N 0 1 Y N N -23.980 39.311 -3.594 7.669 9.634 -0.898 A 4 N1 polymer 1 1 85 ? ? ? PRD_002431 C39 C39 C 0 1 Y N N -23.887 39.369 -4.929 7.592 8.554 -1.654 A 4 C2 polymer 1 1 86 ? ? ? PRD_002431 N20 N20 N 0 1 Y N N -23.713 38.383 -5.806 6.574 7.721 -1.595 A 4 N3 polymer 1 1 87 ? ? ? PRD_002431 C40 C40 C 0 1 Y N N -23.627 37.196 -5.179 5.569 7.938 -0.752 A 4 C4 polymer 1 1 88 ? ? ? PRD_002431 H1 H1 H 0 0 N N N -26.504 33.439 -10.362 6.774 1.447 -0.278 A 1 HOP2 polymer 1 1 89 ? ? ? PRD_002431 H2 H2 H 0 1 N N N -23.877 35.752 -13.021 5.747 -0.818 0.800 A 1 "H5'" polymer 1 1 90 ? ? ? PRD_002431 H3 H3 H 0 0 N N N -22.555 34.618 -13.459 4.090 -1.210 1.319 A 1 "H5''" polymer 1 1 91 ? ? ? PRD_002431 H4 H4 H 0 1 N N N -23.656 33.818 -15.245 4.178 -2.010 -1.374 A 1 "H4'" polymer 1 1 92 ? ? ? PRD_002431 H5 H5 H 0 1 N N N -24.236 36.536 -15.106 4.084 -3.266 1.334 A 1 "H3'" polymer 1 1 93 ? ? ? PRD_002431 H6 H6 H 0 1 N N N -26.368 36.199 -14.074 5.279 -5.166 0.816 A 1 "H2'" polymer 1 1 94 ? ? ? PRD_002431 H7 H7 H 0 0 N N N -27.953 36.448 -15.731 4.843 -6.288 -1.247 A 1 "HO2'" polymer 1 1 95 ? ? ? PRD_002431 H8 H8 H 0 1 N N N -26.769 33.880 -16.000 6.317 -4.392 -1.782 A 1 "H1'" polymer 1 1 96 ? ? ? PRD_002431 H9 H9 H 0 1 N N N -27.689 35.231 -12.444 7.696 -2.629 1.269 A 1 H8 polymer 1 1 97 ? ? ? PRD_002431 H10 H10 H 0 1 N N N -32.683 31.713 -13.313 11.302 -5.661 2.346 A 1 H61 polymer 1 1 98 ? ? ? PRD_002431 H11 H11 H 0 1 N N N -31.656 32.015 -12.080 11.804 -7.179 1.829 A 1 H62 polymer 1 1 99 ? ? ? PRD_002431 H12 H12 H 0 1 N N N -30.126 31.107 -16.703 8.824 -8.472 -1.372 A 1 H2 polymer 1 1 100 ? ? ? PRD_002431 H13 H13 H 0 0 N N N -25.160 36.918 -19.495 1.392 -6.301 1.610 A 2 HOP2 polymer 1 1 101 ? ? ? PRD_002431 H14 H14 H 0 1 N N N -22.762 34.698 -19.066 -0.836 -5.933 0.684 A 2 "H5'" polymer 1 1 102 ? ? ? PRD_002431 H15 H15 H 0 0 N N N -21.263 35.667 -19.269 -1.231 -4.338 1.365 A 2 "H5''" polymer 1 1 103 ? ? ? PRD_002431 H16 H16 H 0 1 N N N -21.922 33.896 -16.883 -1.810 -4.123 -1.394 A 2 "H4'" polymer 1 1 104 ? ? ? PRD_002431 H17 H17 H 0 1 N N N -20.118 35.947 -16.769 -3.227 -4.126 1.220 A 2 "H3'" polymer 1 1 105 ? ? ? PRD_002431 H18 H18 H 0 1 N N N -18.930 35.315 -18.738 -5.091 -5.299 0.567 A 2 "H2'" polymer 1 1 106 ? ? ? PRD_002431 H19 H19 H 0 0 N N N -17.612 34.903 -16.496 -6.200 -4.637 -1.442 A 2 "HO2'" polymer 1 1 107 ? ? ? PRD_002431 H20 H20 H 0 1 N N N -18.906 32.417 -17.846 -4.264 -6.031 -2.142 A 2 "H1'" polymer 1 1 108 ? ? ? PRD_002431 H21 H21 H 0 1 N N N -17.971 31.047 -19.792 -2.791 -7.897 0.805 A 2 H8 polymer 1 1 109 ? ? ? PRD_002431 H22 H22 H 0 1 N N N -18.343 33.981 -25.174 -6.061 -11.433 1.192 A 2 H61 polymer 1 1 110 ? ? ? PRD_002431 H23 H23 H 0 1 N N N -17.192 33.184 -24.332 -7.560 -11.777 0.516 A 2 H62 polymer 1 1 111 ? ? ? PRD_002431 H24 H24 H 0 1 N N N -20.184 36.539 -22.256 -8.477 -8.338 -2.336 A 2 H2 polymer 1 1 112 ? ? ? PRD_002431 H25 H25 H 0 0 N N N -17.633 33.556 -13.496 -6.779 -1.584 0.041 A 3 HOP2 polymer 1 1 113 ? ? ? PRD_002431 H26 H26 H 0 1 N N N -21.147 35.655 -12.279 -5.801 0.705 0.923 A 3 "H5'" polymer 1 1 114 ? ? ? PRD_002431 H27 H27 H 0 0 N N N -19.610 34.751 -12.062 -4.157 1.110 1.472 A 3 "H5''" polymer 1 1 115 ? ? ? PRD_002431 H28 H28 H 0 1 N N N -19.988 36.843 -10.647 -4.263 1.885 -1.254 A 3 "H4'" polymer 1 1 116 ? ? ? PRD_002431 H29 H29 H 0 1 N N N -20.413 38.221 -13.045 -3.998 3.127 1.442 A 3 "H3'" polymer 1 1 117 ? ? ? PRD_002431 H30 H30 H 0 1 N N N -18.158 38.046 -13.769 -5.241 5.013 1.020 A 3 "H2'" polymer 1 1 118 ? ? ? PRD_002431 H31 H31 H 0 0 N N N -17.095 40.023 -13.237 -4.789 6.244 -0.976 A 3 "HO2'" polymer 1 1 119 ? ? ? PRD_002431 H32 H32 H 0 1 N N N -17.282 38.485 -10.891 -6.219 4.312 -1.656 A 3 "H1'" polymer 1 1 120 ? ? ? PRD_002431 H33 H33 H 0 1 N N N -16.422 36.698 -14.245 -7.816 2.722 1.387 A 3 H8 polymer 1 1 121 ? ? ? PRD_002431 H34 H34 H 0 1 N N N -10.630 37.138 -12.169 -11.298 5.970 2.215 A 3 H61 polymer 1 1 122 ? ? ? PRD_002431 H35 H35 H 0 1 N N N -11.532 35.997 -12.912 -11.698 7.493 1.631 A 3 H62 polymer 1 1 123 ? ? ? PRD_002431 H36 H36 H 0 1 N N N -13.178 38.665 -9.075 -8.526 8.525 -1.479 A 3 H2 polymer 1 1 124 ? ? ? PRD_002431 H37 H37 H 0 0 N N N -21.835 41.700 -10.744 -1.519 6.728 0.303 A 4 HOP2 polymer 1 1 125 ? ? ? PRD_002431 H38 H38 H 0 1 N N N -21.227 38.457 -8.856 0.817 5.738 0.774 A 4 "H5'" polymer 1 1 126 ? ? ? PRD_002431 H39 H39 H 0 0 N N N -22.987 38.716 -8.608 1.214 4.092 1.324 A 4 "H5''" polymer 1 1 127 ? ? ? PRD_002431 H40 H40 H 0 1 N N N -21.710 36.189 -9.715 1.802 4.082 -1.433 A 4 "H4'" polymer 1 1 128 ? ? ? PRD_002431 H41 H41 H 0 1 N N N -24.372 36.913 -10.033 3.244 3.973 1.173 A 4 "H3'" polymer 1 1 129 ? ? ? PRD_002431 H42 H42 H 0 1 N N N -24.819 37.063 -7.701 5.096 5.176 0.535 A 4 "H2'" polymer 1 1 130 ? ? ? PRD_002431 H43 H43 H 0 0 N N N -25.900 35.124 -7.081 6.159 4.616 -1.530 A 4 "HO2'" polymer 1 1 131 ? ? ? PRD_002431 H44 H44 H 0 1 N N N -23.167 34.547 -7.285 4.190 6.026 -2.118 A 4 "H1'" polymer 1 1 132 ? ? ? PRD_002431 H45 H45 H 0 1 N N N -23.297 34.004 -4.828 2.811 7.760 0.952 A 4 H8 polymer 1 1 133 ? ? ? PRD_002431 H46 H46 H 0 1 N N N -24.110 38.958 -1.293 6.092 11.281 1.388 A 4 H61 polymer 1 1 134 ? ? ? PRD_002431 H47 H47 H 0 1 N N N -24.758 37.464 -1.411 7.569 11.656 0.679 A 4 H62 polymer 1 1 135 ? ? ? PRD_002431 H48 H48 H 0 1 N N N -23.964 40.359 -5.354 8.394 8.345 -2.346 A 4 H2 polymer 1 1 136 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002431 P1 O1 DOUB N N 1 PRD_002431 P1 O2 SING N N 2 PRD_002431 P1 O3 SING N N 3 PRD_002431 O2 H1 SING N N 4 PRD_002431 O3 C1 SING N N 5 PRD_002431 C1 C2 SING N N 6 PRD_002431 C1 H2 SING N N 7 PRD_002431 C1 H3 SING N N 8 PRD_002431 C2 O4 SING N N 9 PRD_002431 C2 C3 SING N N 10 PRD_002431 C2 H4 SING N N 11 PRD_002431 O4 C5 SING N N 12 PRD_002431 C3 O5 SING N N 13 PRD_002431 C3 C4 SING N N 14 PRD_002431 C3 H5 SING N N 15 PRD_002431 C4 O6 SING N N 16 PRD_002431 C4 C5 SING N N 17 PRD_002431 C4 H6 SING N N 18 PRD_002431 O6 H7 SING N N 19 PRD_002431 C5 N1 SING N N 20 PRD_002431 C5 H8 SING N N 21 PRD_002431 N1 C6 SING Y N 22 PRD_002431 N1 C10 SING Y N 23 PRD_002431 C6 N2 DOUB Y N 24 PRD_002431 C6 H9 SING N N 25 PRD_002431 N2 C7 SING Y N 26 PRD_002431 C7 C8 SING Y N 27 PRD_002431 C7 C10 DOUB Y N 28 PRD_002431 C8 N3 SING N N 29 PRD_002431 C8 N4 DOUB Y N 30 PRD_002431 N3 H10 SING N N 31 PRD_002431 N3 H11 SING N N 32 PRD_002431 N4 C9 SING Y N 33 PRD_002431 C9 N5 DOUB Y N 34 PRD_002431 C9 H12 SING N N 35 PRD_002431 N5 C10 SING Y N 36 PRD_002431 P2 O7 DOUB N N 37 PRD_002431 P2 O8 SING N N 38 PRD_002431 P2 O9 SING N N 39 PRD_002431 O8 H13 SING N N 40 PRD_002431 O9 C11 SING N N 41 PRD_002431 C11 C12 SING N N 42 PRD_002431 C11 H14 SING N N 43 PRD_002431 C11 H15 SING N N 44 PRD_002431 C12 O10 SING N N 45 PRD_002431 C12 C13 SING N N 46 PRD_002431 C12 H16 SING N N 47 PRD_002431 O10 C15 SING N N 48 PRD_002431 C13 O11 SING N N 49 PRD_002431 C13 C14 SING N N 50 PRD_002431 C13 H17 SING N N 51 PRD_002431 C14 O12 SING N N 52 PRD_002431 C14 C15 SING N N 53 PRD_002431 C14 H18 SING N N 54 PRD_002431 O12 H19 SING N N 55 PRD_002431 C15 N6 SING N N 56 PRD_002431 C15 H20 SING N N 57 PRD_002431 N6 C16 SING Y N 58 PRD_002431 N6 C20 SING Y N 59 PRD_002431 C16 N7 DOUB Y N 60 PRD_002431 C16 H21 SING N N 61 PRD_002431 N7 C17 SING Y N 62 PRD_002431 C17 C18 SING Y N 63 PRD_002431 C17 C20 DOUB Y N 64 PRD_002431 C18 N8 SING N N 65 PRD_002431 C18 N9 DOUB Y N 66 PRD_002431 N8 H22 SING N N 67 PRD_002431 N8 H23 SING N N 68 PRD_002431 N9 C19 SING Y N 69 PRD_002431 C19 N10 DOUB Y N 70 PRD_002431 C19 H24 SING N N 71 PRD_002431 N10 C20 SING Y N 72 PRD_002431 P3 O13 DOUB N N 73 PRD_002431 P3 O14 SING N N 74 PRD_002431 P3 O15 SING N N 75 PRD_002431 O14 H25 SING N N 76 PRD_002431 O15 C21 SING N N 77 PRD_002431 C21 C22 SING N N 78 PRD_002431 C21 H26 SING N N 79 PRD_002431 C21 H27 SING N N 80 PRD_002431 C22 O16 SING N N 81 PRD_002431 C22 C23 SING N N 82 PRD_002431 C22 H28 SING N N 83 PRD_002431 O16 C25 SING N N 84 PRD_002431 C23 O17 SING N N 85 PRD_002431 C23 C24 SING N N 86 PRD_002431 C23 H29 SING N N 87 PRD_002431 C24 O18 SING N N 88 PRD_002431 C24 C25 SING N N 89 PRD_002431 C24 H30 SING N N 90 PRD_002431 O18 H31 SING N N 91 PRD_002431 C25 N11 SING N N 92 PRD_002431 C25 H32 SING N N 93 PRD_002431 N11 C26 SING Y N 94 PRD_002431 N11 C30 SING Y N 95 PRD_002431 C26 N12 DOUB Y N 96 PRD_002431 C26 H33 SING N N 97 PRD_002431 N12 C27 SING Y N 98 PRD_002431 C27 C28 SING Y N 99 PRD_002431 C27 C30 DOUB Y N 100 PRD_002431 C28 N13 SING N N 101 PRD_002431 C28 N14 DOUB Y N 102 PRD_002431 N13 H34 SING N N 103 PRD_002431 N13 H35 SING N N 104 PRD_002431 N14 C29 SING Y N 105 PRD_002431 C29 N15 DOUB Y N 106 PRD_002431 C29 H36 SING N N 107 PRD_002431 N15 C30 SING Y N 108 PRD_002431 P4 O19 DOUB N N 109 PRD_002431 P4 O20 SING N N 110 PRD_002431 P4 O21 SING N N 111 PRD_002431 O20 H37 SING N N 112 PRD_002431 O21 C31 SING N N 113 PRD_002431 C31 C32 SING N N 114 PRD_002431 C31 H38 SING N N 115 PRD_002431 C31 H39 SING N N 116 PRD_002431 C32 O22 SING N N 117 PRD_002431 C32 C33 SING N N 118 PRD_002431 C32 H40 SING N N 119 PRD_002431 O22 C35 SING N N 120 PRD_002431 C33 O23 SING N N 121 PRD_002431 C33 C34 SING N N 122 PRD_002431 C33 H41 SING N N 123 PRD_002431 C34 O24 SING N N 124 PRD_002431 C34 C35 SING N N 125 PRD_002431 C34 H42 SING N N 126 PRD_002431 O24 H43 SING N N 127 PRD_002431 C35 N16 SING N N 128 PRD_002431 C35 H44 SING N N 129 PRD_002431 N16 C36 SING Y N 130 PRD_002431 N16 C40 SING Y N 131 PRD_002431 C36 N17 DOUB Y N 132 PRD_002431 C36 H45 SING N N 133 PRD_002431 N17 C37 SING Y N 134 PRD_002431 C37 C38 SING Y N 135 PRD_002431 C37 C40 DOUB Y N 136 PRD_002431 C38 N18 SING N N 137 PRD_002431 C38 N19 DOUB Y N 138 PRD_002431 N18 H46 SING N N 139 PRD_002431 N18 H47 SING N N 140 PRD_002431 N19 C39 SING Y N 141 PRD_002431 C39 N20 DOUB Y N 142 PRD_002431 C39 H48 SING N N 143 PRD_002431 N20 C40 SING Y N 144 PRD_002431 P1 O23 SING N N 145 PRD_002431 O5 P2 SING N N 146 PRD_002431 O11 P3 SING N N 147 PRD_002431 O17 P4 SING N N 148 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002431 InChI InChI 1.06 "InChI=1S/C40H48N20O24P4/c41-29-17-33(49-5-45-29)57(9-53-17)37-21(61)25-13(77-37)1-73-85(65,66)82-26-14(78-38(22(26)62)58-10-54-18-30(42)46-6-50-34(18)58)2-75-87(69,70)84-28-16(80-40(24(28)64)60-12-56-20-32(44)48-8-52-36(20)60)4-76-88(71,72)83-27-15(3-74-86(67,68)81-25)79-39(23(27)63)59-11-55-19-31(43)47-7-51-35(19)59/h5-16,21-28,37-40,61-64H,1-4H2,(H,65,66)(H,67,68)(H,69,70)(H,71,72)(H2,41,45,49)(H2,42,46,50)(H2,43,47,51)(H2,44,48,52)/t13-,14-,15-,16-,21-,22-,23-,24-,25-,26-,27-,28-,37-,38-,39-,40-/m1/s1" PRD_002431 InChIKey InChI 1.06 MIALYWQLJTUJBG-HKIDEBSPSA-N PRD_002431 SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@H]6[C@@H](O)[C@@H](O[C@@H]6CO[P](O)(=O)O[C@H]7[C@@H](O)[C@@H](O[C@@H]7CO[P](O)(=O)O[C@H]4[C@H]3O)n8cnc9c(N)ncnc89)n%10cnc%11c(N)ncnc%10%11)n%12cnc%13c(N)ncnc%12%13" PRD_002431 SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]6[CH](O)[CH](O[CH]6CO[P](O)(=O)O[CH]7[CH](O)[CH](O[CH]7CO[P](O)(=O)O[CH]4[CH]3O)n8cnc9c(N)ncnc89)n%10cnc%11c(N)ncnc%10%11)n%12cnc%13c(N)ncnc%12%13" PRD_002431 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O[C@@H]5[C@@H](COP(=O)(O[C@@H]6[C@@H](COP(=O)(O[C@@H]7[C@@H](COP(=O)(O4)O)O[C@H]([C@@H]7O)n8cnc9c8ncnc9N)O)O[C@H]([C@@H]6O)n1cnc2c1ncnc2N)O)O[C@H]([C@@H]5O)n1cnc2c1ncnc2N)O)O)N" PRD_002431 SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(COP(=O)(OC6C(COP(=O)(OC7C(COP(=O)(O4)O)OC(C7O)n8cnc9c8ncnc9N)O)OC(C6O)n1cnc2c1ncnc2N)O)OC(C5O)n1cnc2c1ncnc2N)O)O)N" #