data_PRDCC_002457 # _chem_comp.id PRD_002457 _chem_comp.name "beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-2-deoxy-2-fluoro-alpha-D-glucopyranose" _chem_comp.formula "C18 H31 F O15" _chem_comp.formula_weight 506.428 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type saccharide _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002457 C1 C1 C 0 1 N N S 3.324 -15.353 3.603 5.675 -0.044 -1.601 G2F 1 C1 polymer 1 1 1 ? ? ? PRD_002457 C2 C2 C 0 1 N N R 1.866 -15.560 3.831 4.373 -0.822 -1.394 G2F 1 C2 polymer 1 1 2 ? ? ? PRD_002457 C3 C3 C 0 1 N N S 1.569 -15.902 5.276 3.733 -0.388 -0.072 G2F 1 C3 polymer 1 1 3 ? ? ? PRD_002457 C4 C4 C 0 1 N N S 2.334 -17.155 5.621 4.733 -0.615 1.066 G2F 1 C4 polymer 1 1 4 ? ? ? PRD_002457 C5 C5 C 0 1 N N R 3.846 -16.824 5.420 6.022 0.154 0.763 G2F 1 C5 polymer 1 1 5 ? ? ? PRD_002457 C6 C6 C 0 1 N N N 4.837 -17.902 5.793 7.048 -0.116 1.866 G2F 1 C6 polymer 1 1 6 ? ? ? PRD_002457 O1 O1 O 0 1 N Y N ? ? ? 5.387 1.352 -1.697 G2F 1 O1 polymer 1 1 7 ? ? ? PRD_002457 O2 O2 O 0 1 N N N 0.167 -16.057 5.467 2.555 -1.161 0.166 G2F 1 O3 polymer 1 1 8 ? ? ? PRD_002457 O3 O3 O 0 1 N N N 2.000 -17.522 7.006 4.174 -0.146 2.294 G2F 1 O4 polymer 1 1 9 ? ? ? PRD_002457 O4 O4 O 0 1 N N N 4.141 -16.441 4.062 6.548 -0.276 -0.494 G2F 1 O5 polymer 1 1 10 ? ? ? PRD_002457 O5 O5 O 0 1 N N N 4.454 -19.176 5.152 8.206 0.691 1.646 G2F 1 O6 polymer 1 1 11 ? ? ? PRD_002457 F1 F1 F 0 1 N N N 1.162 -14.418 3.341 3.494 -0.552 -2.449 G2F 1 F2 polymer 1 1 12 ? ? ? PRD_002457 C7 C7 C 0 1 N N R -2.043 -15.309 6.006 0.193 -1.551 -0.172 BGC 2 C2 polymer 1 1 13 ? ? ? PRD_002457 C8 C8 C 0 1 N N S -2.723 -14.084 6.671 -1.091 -0.902 -0.699 BGC 2 C3 polymer 1 1 14 ? ? ? PRD_002457 C9 C9 C 0 1 N N S -2.016 -13.642 7.933 -1.308 0.433 0.020 BGC 2 C4 polymer 1 1 15 ? ? ? PRD_002457 C10 C10 C 0 1 N N R -0.512 -13.399 7.695 -0.079 1.322 -0.190 BGC 2 C5 polymer 1 1 16 ? ? ? PRD_002457 C11 C11 C 0 1 N N N 0.288 -13.051 8.925 -0.262 2.634 0.574 BGC 2 C6 polymer 1 1 17 ? ? ? PRD_002457 C12 C12 C 0 1 N N R -0.585 -14.953 5.893 1.363 -0.585 -0.375 BGC 2 C1 polymer 1 1 18 ? ? ? PRD_002457 O6 O6 O 0 1 N N N -2.612 -15.664 4.781 0.444 -2.763 -0.887 BGC 2 O2 polymer 1 1 19 ? ? ? PRD_002457 O7 O7 O 0 1 N N N -4.080 -14.488 6.885 -2.201 -1.766 -0.447 BGC 2 O3 polymer 1 1 20 ? ? ? PRD_002457 O8 O8 O 0 1 N N N -2.653 -12.433 8.431 -2.463 1.081 -0.515 BGC 2 O4 polymer 1 1 21 ? ? ? PRD_002457 O9 O9 O 0 1 N N N 0.045 -14.623 7.120 1.084 0.647 0.293 BGC 2 O5 polymer 1 1 22 ? ? ? PRD_002457 O10 O10 O 0 1 N N N 0.198 -14.109 9.911 0.829 3.510 0.285 BGC 2 O6 polymer 1 1 23 ? ? ? PRD_002457 C13 C13 C 0 1 N N R -3.274 -11.018 10.180 -4.825 1.586 -0.416 BGC 3 C2 polymer 1 1 24 ? ? ? PRD_002457 C14 C14 C 0 1 N N S -3.999 -10.986 11.524 -6.136 1.179 0.264 BGC 3 C3 polymer 1 1 25 ? ? ? PRD_002457 C15 C15 C 0 1 N N S -5.268 -11.775 11.415 -6.359 -0.323 0.060 BGC 3 C4 polymer 1 1 26 ? ? ? PRD_002457 C16 C16 C 0 1 N N R -4.963 -13.190 10.904 -5.155 -1.090 0.613 BGC 3 C5 polymer 1 1 27 ? ? ? PRD_002457 C17 C17 C 0 1 N N N -6.222 -14.007 10.788 -5.342 -2.587 0.358 BGC 3 C6 polymer 1 1 28 ? ? ? PRD_002457 C18 C18 C 0 1 N N R -3.016 -12.475 9.745 -3.680 0.746 0.155 BGC 3 C1 polymer 1 1 29 ? ? ? PRD_002457 O11 O11 O 0 1 N N N -2.033 -10.355 10.317 -4.570 2.971 -0.171 BGC 3 O2 polymer 1 1 30 ? ? ? PRD_002457 O12 O12 O 0 1 N N N -4.347 -9.621 11.731 -7.221 1.906 -0.314 BGC 3 O3 polymer 1 1 31 ? ? ? PRD_002457 O13 O13 O 0 1 N N N -5.825 -11.915 12.733 -7.542 -0.728 0.752 BGC 3 O4 polymer 1 1 32 ? ? ? PRD_002457 O14 O14 O 0 1 N N N -4.279 -13.097 9.642 -3.965 -0.641 -0.041 BGC 3 O5 polymer 1 1 33 ? ? ? PRD_002457 O15 O15 O 0 1 N N N -7.136 -13.532 9.813 -4.277 -3.312 0.975 BGC 3 O6 polymer 1 1 34 ? ? ? PRD_002457 H1 H1 H 0 1 N N N 3.331 -15.615 2.535 6.157 -0.380 -2.520 G2F 1 H1 polymer 1 1 35 ? ? ? PRD_002457 H2 H2 H 0 1 N N N 1.563 -16.429 3.228 4.588 -1.890 -1.362 G2F 1 H2 polymer 1 1 36 ? ? ? PRD_002457 H3 H3 H 0 1 N N N 1.939 -15.082 5.909 3.473 0.670 -0.123 G2F 1 H3 polymer 1 1 37 ? ? ? PRD_002457 H4 H4 H 0 1 N N N 2.049 -17.965 4.933 4.955 -1.679 1.148 G2F 1 H4 polymer 1 1 38 ? ? ? PRD_002457 H5 H5 H 0 1 N N N 4.060 -15.959 6.064 5.806 1.222 0.721 G2F 1 H5 polymer 1 1 39 ? ? ? PRD_002457 H6 H6 H 0 1 N N N 5.841 -17.609 5.452 6.613 0.128 2.835 G2F 1 H61 polymer 1 1 40 ? ? ? PRD_002457 H7 H7 H 0 1 N N N 4.843 -18.030 6.885 7.330 -1.169 1.849 G2F 1 H62 polymer 1 1 41 ? ? ? PRD_002457 H8 H8 H 0 1 N Y N ? ? ? 6.168 1.907 -1.829 G2F 1 HO1 polymer 1 1 42 ? ? ? PRD_002457 H9 H9 H 0 1 N Y N 2.471 -18.311 7.247 4.754 -0.259 3.059 G2F 1 HO4 polymer 1 1 43 ? ? ? PRD_002457 H10 H10 H 0 1 N N N 5.079 -19.851 5.389 8.900 0.571 2.309 G2F 1 HO6 polymer 1 1 44 ? ? ? PRD_002457 H11 H11 H 0 1 N N N -2.131 -16.153 6.706 0.081 -1.770 0.890 BGC 2 H2 polymer 1 1 45 ? ? ? PRD_002457 H12 H12 H 0 1 N N N -2.698 -13.252 5.951 -0.998 -0.729 -1.771 BGC 2 H3 polymer 1 1 46 ? ? ? PRD_002457 H13 H13 H 0 1 N N N -2.117 -14.439 8.685 -1.450 0.254 1.086 BGC 2 H4 polymer 1 1 47 ? ? ? PRD_002457 H14 H14 H 0 1 N N N -0.409 -12.580 6.968 0.039 1.534 -1.253 BGC 2 H5 polymer 1 1 48 ? ? ? PRD_002457 H15 H15 H 0 1 N N N 1.342 -12.910 8.642 -1.197 3.105 0.269 BGC 2 H61 polymer 1 1 49 ? ? ? PRD_002457 H16 H16 H 0 1 N N N -0.104 -12.119 9.359 -0.291 2.430 1.645 BGC 2 H62 polymer 1 1 50 ? ? ? PRD_002457 H17 H17 H 0 1 N N N -0.478 -14.122 5.180 1.500 -0.399 -1.440 BGC 2 H1 polymer 1 1 51 ? ? ? PRD_002457 H18 H18 H 0 1 N Y N -2.155 -16.417 4.425 1.244 -3.227 -0.604 BGC 2 HO2 polymer 1 1 52 ? ? ? PRD_002457 H19 H19 H 0 1 N Y N -4.561 -13.778 7.294 -2.127 -2.634 -0.868 BGC 2 HO3 polymer 1 1 53 ? ? ? PRD_002457 H20 H20 H 0 1 N Y N 0.707 -13.872 10.677 0.779 4.364 0.737 BGC 2 HO6 polymer 1 1 54 ? ? ? PRD_002457 H21 H21 H 0 1 N N N -3.898 -10.524 9.421 -4.904 1.414 -1.490 BGC 3 H2 polymer 1 1 55 ? ? ? PRD_002457 H22 H22 H 0 1 N N N -3.354 -11.379 12.324 -6.076 1.397 1.331 BGC 3 H3 polymer 1 1 56 ? ? ? PRD_002457 H23 H23 H 0 1 N N N -5.973 -11.275 10.734 -6.468 -0.534 -1.004 BGC 3 H4 polymer 1 1 57 ? ? ? PRD_002457 H24 H24 H 0 1 N N N -4.303 -13.678 11.636 -5.070 -0.911 1.684 BGC 3 H5 polymer 1 1 58 ? ? ? PRD_002457 H25 H25 H 0 1 N N N -5.941 -15.037 10.525 -6.294 -2.910 0.780 BGC 3 H61 polymer 1 1 59 ? ? ? PRD_002457 H26 H26 H 0 1 N N N -6.727 -14.003 11.765 -5.337 -2.776 -0.715 BGC 3 H62 polymer 1 1 60 ? ? ? PRD_002457 H27 H27 H 0 1 N N N -2.309 -12.990 10.412 -3.576 0.949 1.220 BGC 3 H1 polymer 1 1 61 ? ? ? PRD_002457 H28 H28 H 0 1 N Y N -1.573 -10.369 9.486 -3.754 3.298 -0.573 BGC 3 HO2 polymer 1 1 62 ? ? ? PRD_002457 H29 H29 H 0 1 N Y N -4.805 -9.533 12.558 -7.142 2.866 -0.227 BGC 3 HO3 polymer 1 1 63 ? ? ? PRD_002457 H30 H30 H 0 1 N Y N -6.632 -12.414 12.685 -8.344 -0.278 0.456 BGC 3 HO4 polymer 1 1 64 ? ? ? PRD_002457 H31 H31 H 0 1 N Y N -7.902 -14.094 9.796 -4.331 -4.270 0.854 BGC 3 HO6 polymer 1 1 65 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002457 C1 C2 SING N N 1 PRD_002457 C1 O1 SING N N 2 PRD_002457 C1 O4 SING N N 3 PRD_002457 C1 H1 SING N N 4 PRD_002457 C2 C3 SING N N 5 PRD_002457 C2 F1 SING N N 6 PRD_002457 C2 H2 SING N N 7 PRD_002457 C3 C4 SING N N 8 PRD_002457 C3 O2 SING N N 9 PRD_002457 C3 H3 SING N N 10 PRD_002457 C4 C5 SING N N 11 PRD_002457 C4 O3 SING N N 12 PRD_002457 C4 H4 SING N N 13 PRD_002457 C5 C6 SING N N 14 PRD_002457 C5 O4 SING N N 15 PRD_002457 C5 H5 SING N N 16 PRD_002457 C6 O5 SING N N 17 PRD_002457 C6 H6 SING N N 18 PRD_002457 C6 H7 SING N N 19 PRD_002457 O1 H8 SING N N 20 PRD_002457 O3 H9 SING N N 21 PRD_002457 O5 H10 SING N N 22 PRD_002457 C7 C8 SING N N 23 PRD_002457 C7 C12 SING N N 24 PRD_002457 C7 O6 SING N N 25 PRD_002457 C7 H11 SING N N 26 PRD_002457 C8 C9 SING N N 27 PRD_002457 C8 O7 SING N N 28 PRD_002457 C8 H12 SING N N 29 PRD_002457 C9 C10 SING N N 30 PRD_002457 C9 O8 SING N N 31 PRD_002457 C9 H13 SING N N 32 PRD_002457 C10 C11 SING N N 33 PRD_002457 C10 O9 SING N N 34 PRD_002457 C10 H14 SING N N 35 PRD_002457 C11 O10 SING N N 36 PRD_002457 C11 H15 SING N N 37 PRD_002457 C11 H16 SING N N 38 PRD_002457 C12 O9 SING N N 39 PRD_002457 C12 H17 SING N N 40 PRD_002457 O6 H18 SING N N 41 PRD_002457 O7 H19 SING N N 42 PRD_002457 O10 H20 SING N N 43 PRD_002457 C13 C14 SING N N 44 PRD_002457 C13 C18 SING N N 45 PRD_002457 C13 O11 SING N N 46 PRD_002457 C13 H21 SING N N 47 PRD_002457 C14 C15 SING N N 48 PRD_002457 C14 O12 SING N N 49 PRD_002457 C14 H22 SING N N 50 PRD_002457 C15 C16 SING N N 51 PRD_002457 C15 O13 SING N N 52 PRD_002457 C15 H23 SING N N 53 PRD_002457 C16 C17 SING N N 54 PRD_002457 C16 O14 SING N N 55 PRD_002457 C16 H24 SING N N 56 PRD_002457 C17 O15 SING N N 57 PRD_002457 C17 H25 SING N N 58 PRD_002457 C17 H26 SING N N 59 PRD_002457 C18 O14 SING N N 60 PRD_002457 C18 H27 SING N N 61 PRD_002457 O11 H28 SING N N 62 PRD_002457 O12 H29 SING N N 63 PRD_002457 O13 H30 SING N N 64 PRD_002457 O15 H31 SING N N 65 PRD_002457 O2 C12 SING N N 66 PRD_002457 O8 C18 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002457 InChI InChI 1.06 "InChI=1S/C18H31FO15/c19-7-15(9(24)5(2-21)30-16(7)29)34-18-13(28)11(26)14(6(3-22)32-18)33-17-12(27)10(25)8(23)4(1-20)31-17/h4-18,20-29H,1-3H2/t4-,5-,6-,7-,8-,9-,10+,11-,12-,13-,14-,15-,16+,17+,18+/m1/s1" PRD_002457 InChIKey InChI 1.06 YFXOQIHYOFXTCD-QSCMNUSVSA-N PRD_002457 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@@H](O[C@@H]2CO)O[C@H]3[C@H](O)[C@@H](CO)O[C@H](O)[C@@H]3F)[C@H](O)[C@@H](O)[C@@H]1O" PRD_002457 SMILES CACTVS 3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O[CH]2CO)O[CH]3[CH](O)[CH](CO)O[CH](O)[CH]3F)[CH](O)[CH](O)[CH]1O" PRD_002457 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)F)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O)O" PRD_002457 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)F)OC2C(C(C(C(O2)CO)OC3C(C(C(C(O3)CO)O)O)O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id PRD_002457 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-6-[(2~{R},3~{R},4~{S},5~{R},6~{S})-5-fluoranyl-2-(hydroxymethyl)-3,6-bis(oxidanyl)oxan-4-yl]oxy-2-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol" #