data_PRDCC_002469 # _chem_comp.id PRD_002469 _chem_comp.name "Inhibitor 18" _chem_comp.formula "C30 H42 N4 O6" _chem_comp.formula_weight 554.678 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002469 C1 C1 C 0 1 N N N 5.859 -10.050 16.571 6.541 -0.699 -0.900 P6S 1 C21 polymer 1 1 1 ? ? ? PRD_002469 C2 C2 C 0 1 Y N N 5.924 -11.064 17.701 7.634 -0.619 0.134 P6S 1 C22 polymer 1 1 2 ? ? ? PRD_002469 C3 C3 C 0 1 Y N N 5.738 -11.616 20.056 9.132 0.683 1.471 P6S 1 C24 polymer 1 1 3 ? ? ? PRD_002469 C4 C4 C 0 1 Y N N 6.253 -13.337 18.457 9.141 -1.704 1.645 P6S 1 C26 polymer 1 1 4 ? ? ? PRD_002469 C5 C5 C 0 1 N N N 7.737 -8.610 17.341 4.157 -0.713 -1.030 P6S 1 C19 polymer 1 1 5 ? ? ? PRD_002469 C6 C6 C 0 1 Y N N 5.679 -10.684 19.025 8.129 0.611 0.523 P6S 1 C23 polymer 1 1 6 ? ? ? PRD_002469 C7 C7 C 0 1 Y N N 6.026 -12.948 19.771 9.640 -0.474 2.031 P6S 1 C25 polymer 1 1 7 ? ? ? PRD_002469 C8 C8 C 0 1 Y N N 6.205 -12.401 17.423 8.138 -1.777 0.697 P6S 1 C27 polymer 1 1 8 ? ? ? PRD_002469 O1 O1 O 0 1 N N N 7.133 -9.450 16.320 5.247 -0.652 -0.242 P6S 1 O20 polymer 1 1 9 ? ? ? PRD_002469 O2 O2 O 0 1 N N N 7.040 -8.205 18.253 4.284 -0.802 -2.235 P6S 1 O28 polymer 1 1 10 ? ? ? PRD_002469 N1 N1 N 0 1 N N N 9.029 -8.323 17.247 2.927 -0.674 -0.482 VAL 2 N polymer 1 1 11 ? ? ? PRD_002469 C9 C9 C 0 1 N N S 9.684 -7.453 18.197 1.741 -0.741 -1.340 VAL 2 CA polymer 1 1 12 ? ? ? PRD_002469 C10 C10 C 0 1 N N N 9.945 -6.140 17.519 0.577 -0.088 -0.639 VAL 2 C polymer 1 1 13 ? ? ? PRD_002469 O3 O3 O 0 1 N N N 10.538 -6.108 16.457 0.724 0.385 0.468 VAL 2 O polymer 1 1 14 ? ? ? PRD_002469 C11 C11 C 0 1 N N N 10.980 -8.109 18.684 1.405 -2.204 -1.633 VAL 2 CB polymer 1 1 15 ? ? ? PRD_002469 C12 C12 C 0 1 N N N 11.949 -7.090 19.275 2.586 -2.866 -2.345 VAL 2 CG1 polymer 1 1 16 ? ? ? PRD_002469 C13 C13 C 0 1 N N N 10.681 -9.209 19.699 1.125 -2.936 -0.319 VAL 2 CG2 polymer 1 1 17 ? ? ? PRD_002469 N2 N2 N 0 1 N N N 9.491 -5.039 18.125 -0.627 -0.031 -1.242 ALC 3 N polymer 1 1 18 ? ? ? PRD_002469 C14 C14 C 0 1 N N S 9.702 -3.715 17.568 -1.758 0.603 -0.561 ALC 3 CA polymer 1 1 19 ? ? ? PRD_002469 C15 C15 C 0 1 N N N 11.160 -3.351 17.621 -3.048 0.034 -1.093 ALC 3 C polymer 1 1 20 ? ? ? PRD_002469 O4 O4 O 0 1 N N N 11.779 -3.421 18.671 -3.025 -0.818 -1.957 ALC 3 O polymer 1 1 21 ? ? ? PRD_002469 C16 C16 C 0 1 N N N 8.911 -2.708 18.408 -1.724 2.112 -0.812 ALC 3 CB polymer 1 1 22 ? ? ? PRD_002469 C17 C17 C 0 1 N N N 7.534 -2.342 17.835 -0.475 2.709 -0.162 ALC 3 CG polymer 1 1 23 ? ? ? PRD_002469 C18 C18 C 0 1 N N N 6.763 -3.561 17.328 -0.375 4.194 -0.518 ALC 3 CD2 polymer 1 1 24 ? ? ? PRD_002469 C19 C19 C 0 1 N N N 5.360 -3.223 16.811 0.875 4.791 0.132 ALC 3 CE2 polymer 1 1 25 ? ? ? PRD_002469 C20 C20 C 0 1 N N N 4.684 -2.096 17.588 0.784 4.635 1.651 ALC 3 CZ polymer 1 1 26 ? ? ? PRD_002469 C21 C21 C 0 1 N N N 5.265 -1.947 18.988 0.684 3.151 2.007 ALC 3 CE1 polymer 1 1 27 ? ? ? PRD_002469 C22 C22 C 0 1 N N N 6.752 -1.582 18.912 -0.565 2.553 1.357 ALC 3 CD1 polymer 1 1 28 ? ? ? PRD_002469 C23 C23 C 0 1 N N S 13.086 -2.425 16.452 -5.482 -0.083 -1.127 YOP 4 CA polymer 1 1 29 ? ? ? PRD_002469 C24 C24 C 0 1 N N N 13.860 -3.229 15.411 -6.579 0.066 -0.071 YOP 4 CB polymer 1 1 30 ? ? ? PRD_002469 C25 C25 C 0 1 N N N 13.009 -0.941 16.064 -5.888 0.673 -2.394 YOP 4 C polymer 1 1 31 ? ? ? PRD_002469 C26 C26 C 0 1 N N N 14.494 -4.467 16.005 -6.237 -0.777 1.130 YOP 4 CG polymer 1 1 32 ? ? ? PRD_002469 C27 C27 C 0 1 N N N 14.476 -4.783 17.345 -5.590 -0.227 2.198 YOP 4 CD1 polymer 1 1 33 ? ? ? PRD_002469 C28 C28 C 0 1 N N N 15.106 -5.948 17.785 -5.284 -1.032 3.304 YOP 4 CE1 polymer 1 1 34 ? ? ? PRD_002469 C29 C29 C 0 1 N N N 15.754 -6.792 16.891 -5.629 -2.340 3.303 YOP 4 CF polymer 1 1 35 ? ? ? PRD_002469 C30 C30 C 0 1 N N N 15.196 -5.405 15.097 -6.586 -2.138 1.165 YOP 4 CD2 polymer 1 1 36 ? ? ? PRD_002469 N3 N3 N 0 1 N N N 11.732 -2.970 16.480 -4.228 0.471 -0.609 YOP 4 N polymer 1 1 37 ? ? ? PRD_002469 N4 N4 N 0 1 N N N 15.788 -6.513 15.584 -6.273 -2.887 2.240 YOP 4 NE2 polymer 1 1 38 ? ? ? PRD_002469 O5 O5 O 0 1 N N N 15.205 -5.151 13.890 -7.165 -2.644 0.217 YOP 4 OD2 polymer 1 1 39 ? ? ? PRD_002469 O6 O6 O 0 1 N N N 14.268 -0.255 16.052 -6.182 2.032 -2.064 YOP 4 O polymer 1 1 40 ? ? ? PRD_002469 H1 H1 H 0 1 N N N 5.141 -9.261 16.841 6.629 0.143 -1.588 P6S 1 H7 polymer 1 1 41 ? ? ? PRD_002469 H2 H2 H 0 1 N N N 5.518 -10.558 15.657 6.632 -1.632 -1.455 P6S 1 H8 polymer 1 1 42 ? ? ? PRD_002469 H3 H3 H 0 1 N N N 5.561 -11.307 21.076 9.522 1.645 1.773 P6S 1 H9 polymer 1 1 43 ? ? ? PRD_002469 H4 H4 H 0 1 N N N 6.468 -14.372 18.234 9.534 -2.609 2.086 P6S 1 H10 polymer 1 1 44 ? ? ? PRD_002469 H5 H5 H 0 1 N N N 5.441 -9.655 19.249 7.733 1.515 0.086 P6S 1 H20 polymer 1 1 45 ? ? ? PRD_002469 H6 H6 H 0 1 N N N 6.073 -13.675 20.568 10.423 -0.417 2.772 P6S 1 H21 polymer 1 1 46 ? ? ? PRD_002469 H7 H7 H 0 1 N N N 6.386 -12.713 16.405 7.747 -2.738 0.396 P6S 1 H22 polymer 1 1 47 ? ? ? PRD_002469 H8 H8 H 0 1 N N N 9.563 -8.719 16.500 2.826 -0.603 0.480 VAL 2 H polymer 1 1 48 ? ? ? PRD_002469 H9 H9 H 0 1 N N N 9.027 -7.285 19.063 1.940 -0.219 -2.276 VAL 2 HA polymer 1 1 49 ? ? ? PRD_002469 H10 H10 H 0 1 N N N 11.468 -8.575 17.815 0.522 -2.253 -2.271 VAL 2 HB polymer 1 1 50 ? ? ? PRD_002469 H11 H11 H 0 0 N N N 12.862 -7.603 19.610 3.468 -2.817 -1.707 VAL 2 HG11 polymer 1 1 51 ? ? ? PRD_002469 H12 H12 H 0 0 N N N 12.208 -6.344 18.509 2.346 -3.909 -2.553 VAL 2 HG12 polymer 1 1 52 ? ? ? PRD_002469 H13 H13 H 0 0 N N N 11.475 -6.588 20.131 2.785 -2.345 -3.281 VAL 2 HG13 polymer 1 1 53 ? ? ? PRD_002469 H14 H14 H 0 0 N N N 11.624 -9.665 20.034 0.283 -2.465 0.188 VAL 2 HG21 polymer 1 1 54 ? ? ? PRD_002469 H15 H15 H 0 0 N N N 10.155 -8.777 20.563 0.886 -3.979 -0.528 VAL 2 HG22 polymer 1 1 55 ? ? ? PRD_002469 H16 H16 H 0 0 N N N 10.048 -9.977 19.231 2.007 -2.887 0.319 VAL 2 HG23 polymer 1 1 56 ? ? ? PRD_002469 H17 H17 H 0 1 N N N 8.992 -5.130 18.987 -0.744 -0.410 -2.127 ALC 3 H polymer 1 1 57 ? ? ? PRD_002469 H18 H18 H 0 1 N N N 9.349 -3.677 16.527 -1.691 0.411 0.510 ALC 3 HA polymer 1 1 58 ? ? ? PRD_002469 H19 H19 H 0 1 N N N 8.763 -3.138 19.410 -1.702 2.301 -1.885 ALC 3 HB2 polymer 1 1 59 ? ? ? PRD_002469 H20 H20 H 0 1 N N N 9.506 -1.786 18.489 -2.613 2.572 -0.380 ALC 3 HB3 polymer 1 1 60 ? ? ? PRD_002469 H21 H21 H 0 1 N N N 7.691 -1.661 16.985 0.410 2.187 -0.529 ALC 3 HG polymer 1 1 61 ? ? ? PRD_002469 H22 H22 H 0 0 N N N 7.336 -4.019 16.508 -0.310 4.304 -1.600 ALC 3 HD23 polymer 1 1 62 ? ? ? PRD_002469 H23 H23 H 0 0 N N N 6.666 -4.280 18.154 -1.259 4.715 -0.152 ALC 3 HD22 polymer 1 1 63 ? ? ? PRD_002469 H24 H24 H 0 0 N N N 5.440 -2.920 15.756 1.759 4.269 -0.235 ALC 3 HE23 polymer 1 1 64 ? ? ? PRD_002469 H25 H25 H 0 0 N N N 4.734 -4.124 16.887 0.946 5.848 -0.122 ALC 3 HE22 polymer 1 1 65 ? ? ? PRD_002469 H26 H26 H 0 1 N N N 4.825 -1.152 17.041 1.675 5.061 2.114 ALC 3 HZ3 polymer 1 1 66 ? ? ? PRD_002469 H27 H27 H 0 1 N N N 3.609 -2.315 17.670 -0.100 5.157 2.017 ALC 3 HZ2 polymer 1 1 67 ? ? ? PRD_002469 H28 H28 H 0 0 N N N 4.723 -1.153 19.523 1.569 2.629 1.640 ALC 3 HE13 polymer 1 1 68 ? ? ? PRD_002469 H29 H29 H 0 0 N N N 5.152 -2.897 19.531 0.620 3.040 3.089 ALC 3 HE12 polymer 1 1 69 ? ? ? PRD_002469 H30 H30 H 0 0 N N N 7.210 -1.799 19.888 -1.450 3.075 1.723 ALC 3 HD12 polymer 1 1 70 ? ? ? PRD_002469 H31 H31 H 0 0 N N N 6.832 -0.505 18.701 -0.636 1.495 1.610 ALC 3 HD13 polymer 1 1 71 ? ? ? PRD_002469 H32 H32 H 0 1 N N N 13.568 -2.527 17.436 -5.344 -1.138 -1.362 YOP 4 HA polymer 1 1 72 ? ? ? PRD_002469 H33 H33 H 0 1 N N N 14.652 -2.593 14.988 -6.656 1.111 0.229 YOP 4 HB1 polymer 1 1 73 ? ? ? PRD_002469 H34 H34 H 0 1 N N N 13.168 -3.533 14.612 -7.531 -0.264 -0.487 YOP 4 HB2 polymer 1 1 74 ? ? ? PRD_002469 H35 H35 H 0 1 N N N 12.350 -0.433 16.784 -5.070 0.642 -3.113 YOP 4 HC2 polymer 1 1 75 ? ? ? PRD_002469 H36 H36 H 0 1 N N N 12.573 -0.873 15.056 -6.772 0.205 -2.828 YOP 4 HC1 polymer 1 1 76 ? ? ? PRD_002469 H37 H37 H 0 1 N N N 13.978 -4.134 18.050 -5.317 0.818 2.191 YOP 4 HD1 polymer 1 1 77 ? ? ? PRD_002469 H38 H38 H 0 1 N N N 15.090 -6.197 18.836 -4.772 -0.608 4.155 YOP 4 HE1 polymer 1 1 78 ? ? ? PRD_002469 H39 H39 H 0 1 N N N 16.237 -7.686 17.257 -5.391 -2.956 4.158 YOP 4 HF polymer 1 1 79 ? ? ? PRD_002469 H40 H40 H 0 1 N N N 11.223 -3.059 15.624 -4.247 1.152 0.081 YOP 4 H polymer 1 1 80 ? ? ? PRD_002469 H41 H41 H 0 1 N N N 14.133 0.652 15.803 -6.447 2.572 -2.822 YOP 4 H42 polymer 1 1 81 ? ? ? PRD_002469 H42 H42 H 0 1 N N N 16.259 -7.135 14.959 -6.516 -3.826 2.258 YOP 4 HE2 polymer 1 1 82 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002469 C1 O1 SING N N 1 PRD_002469 C1 C2 SING N N 2 PRD_002469 C2 C8 DOUB Y N 3 PRD_002469 C2 C6 SING Y N 4 PRD_002469 C3 C7 SING Y N 5 PRD_002469 C3 C6 DOUB Y N 6 PRD_002469 C4 C8 SING Y N 7 PRD_002469 C4 C7 DOUB Y N 8 PRD_002469 C5 O1 SING N N 9 PRD_002469 C5 O2 DOUB N N 10 PRD_002469 C1 H1 SING N N 11 PRD_002469 C1 H2 SING N N 12 PRD_002469 C3 H3 SING N N 13 PRD_002469 C4 H4 SING N N 14 PRD_002469 C6 H5 SING N N 15 PRD_002469 C7 H6 SING N N 16 PRD_002469 C8 H7 SING N N 17 PRD_002469 N1 C9 SING N N 18 PRD_002469 N1 H8 SING N N 19 PRD_002469 C9 C10 SING N N 20 PRD_002469 C9 C11 SING N N 21 PRD_002469 C9 H9 SING N N 22 PRD_002469 C10 O3 DOUB N N 23 PRD_002469 C11 C12 SING N N 24 PRD_002469 C11 C13 SING N N 25 PRD_002469 C11 H10 SING N N 26 PRD_002469 C12 H11 SING N N 27 PRD_002469 C12 H12 SING N N 28 PRD_002469 C12 H13 SING N N 29 PRD_002469 C13 H14 SING N N 30 PRD_002469 C13 H15 SING N N 31 PRD_002469 C13 H16 SING N N 32 PRD_002469 N2 C14 SING N N 33 PRD_002469 N2 H17 SING N N 34 PRD_002469 C14 C15 SING N N 35 PRD_002469 C14 C16 SING N N 36 PRD_002469 C14 H18 SING N N 37 PRD_002469 C15 O4 DOUB N N 38 PRD_002469 C16 C17 SING N N 39 PRD_002469 C16 H19 SING N N 40 PRD_002469 C16 H20 SING N N 41 PRD_002469 C17 C18 SING N N 42 PRD_002469 C17 C22 SING N N 43 PRD_002469 C17 H21 SING N N 44 PRD_002469 C18 C19 SING N N 45 PRD_002469 C18 H22 SING N N 46 PRD_002469 C18 H23 SING N N 47 PRD_002469 C19 C20 SING N N 48 PRD_002469 C19 H24 SING N N 49 PRD_002469 C19 H25 SING N N 50 PRD_002469 C20 C21 SING N N 51 PRD_002469 C20 H26 SING N N 52 PRD_002469 C20 H27 SING N N 53 PRD_002469 C21 C22 SING N N 54 PRD_002469 C21 H28 SING N N 55 PRD_002469 C21 H29 SING N N 56 PRD_002469 C22 H30 SING N N 57 PRD_002469 C22 H31 SING N N 58 PRD_002469 O5 C30 DOUB N N 59 PRD_002469 C30 N4 SING N N 60 PRD_002469 C30 C26 SING N N 61 PRD_002469 C24 C26 SING N N 62 PRD_002469 C24 C23 SING N N 63 PRD_002469 N4 C29 SING N N 64 PRD_002469 C26 C27 DOUB N N 65 PRD_002469 O6 C25 SING N N 66 PRD_002469 C25 C23 SING N N 67 PRD_002469 C23 N3 SING N N 68 PRD_002469 C29 C28 DOUB N N 69 PRD_002469 C27 C28 SING N N 70 PRD_002469 C23 H32 SING N N 71 PRD_002469 C24 H33 SING N N 72 PRD_002469 C24 H34 SING N N 73 PRD_002469 C25 H35 SING N N 74 PRD_002469 C25 H36 SING N N 75 PRD_002469 C27 H37 SING N N 76 PRD_002469 C28 H38 SING N N 77 PRD_002469 C29 H39 SING N N 78 PRD_002469 N3 H40 SING N N 79 PRD_002469 O6 H41 SING N N 80 PRD_002469 N4 H42 SING N N 81 PRD_002469 C5 N1 SING N N 82 PRD_002469 C10 N2 SING N N 83 PRD_002469 C15 N3 SING N N 84 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002469 SMILES ACDLabs 12.01 "O=C1NC=CC=C1CC(CO)NC(=O)C(CC1CCCCC1)NC(=O)C(NC(=O)OCc1ccccc1)C(C)C" PRD_002469 InChI InChI 1.06 "InChI=1S/C30H42N4O6/c1-20(2)26(34-30(39)40-19-22-12-7-4-8-13-22)29(38)33-25(16-21-10-5-3-6-11-21)28(37)32-24(18-35)17-23-14-9-15-31-27(23)36/h4,7-9,12-15,20-21,24-26,35H,3,5-6,10-11,16-19H2,1-2H3,(H,31,36)(H,32,37)(H,33,38)(H,34,39)/t24-,25-,26-/m0/s1" PRD_002469 InChIKey InChI 1.06 RRGDUGYKJDNWPF-GSDHBNRESA-N PRD_002469 SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CC2CCCCC2)C(=O)N[C@H](CO)CC3=CC=CNC3=O" PRD_002469 SMILES CACTVS 3.385 "CC(C)[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CC2CCCCC2)C(=O)N[CH](CO)CC3=CC=CNC3=O" PRD_002469 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](CC2=CC=CNC2=O)CO)NC(=O)OCc3ccccc3" PRD_002469 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC(CC1CCCCC1)C(=O)NC(CC2=CC=CNC2=O)CO)NC(=O)OCc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_002469 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-valyl-3-cyclohexyl-N-[(2R)-1-hydroxy-3-(2-oxo-1,2-dihydropyridin-3-yl)propan-2-yl]-L-alaninamide" PRD_002469 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-(2-oxidanylidene-1~{H}-pyridin-3-yl)propan-2-yl]amino]propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" #