data_PRDCC_002489 # _chem_comp.id PRD_002489 _chem_comp.name "lipid II mimetic, LPATA: Thr-in conformation" _chem_comp.formula "C53 H85 N14 O16" _chem_comp.formula_weight 1174.326 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002489 C1 C1 C 0 1 N N N 17.131 20.673 99.687 16.833 1.018 -1.343 BE2 1 C polymer 1 1 1 ? ? ? PRD_002489 O1 O1 O 0 1 N N N 16.150 21.344 99.691 17.639 0.315 -0.763 BE2 1 O polymer 1 1 2 ? ? ? PRD_002489 C2 C2 C 0 1 Y N N 18.395 21.231 100.353 17.299 2.049 -2.287 BE2 1 C1 polymer 1 1 3 ? ? ? PRD_002489 C3 C3 C 0 1 Y N N 19.043 20.507 101.351 18.671 2.301 -2.437 BE2 1 CA polymer 1 1 4 ? ? ? PRD_002489 C4 C4 C 0 1 Y N N 20.175 21.024 101.951 19.097 3.276 -3.331 BE2 1 C3 polymer 1 1 5 ? ? ? PRD_002489 N1 N1 N 0 1 N N N 18.544 19.211 101.761 19.598 1.580 -1.696 BE2 1 N polymer 1 1 6 ? ? ? PRD_002489 C5 C5 C 0 1 Y N N 20.658 22.266 101.563 18.174 3.991 -4.066 BE2 1 C4 polymer 1 1 7 ? ? ? PRD_002489 C6 C6 C 0 1 Y N N 20.005 22.989 100.576 16.818 3.744 -3.920 BE2 1 C5 polymer 1 1 8 ? ? ? PRD_002489 C7 C7 C 0 1 Y N N 18.865 22.473 99.977 16.377 2.778 -3.044 BE2 1 C6 polymer 1 1 9 ? ? ? PRD_002489 N2 N2 N 0 1 N N N 17.108 19.351 99.052 15.513 0.849 -1.126 LEU 2 N polymer 1 1 10 ? ? ? PRD_002489 C8 C8 C 0 1 N N S 15.857 18.901 98.468 15.050 -0.180 -0.191 LEU 2 CA polymer 1 1 11 ? ? ? PRD_002489 C9 C9 C 0 1 N N N 14.938 18.660 99.691 13.647 -0.594 -0.555 LEU 2 C polymer 1 1 12 ? ? ? PRD_002489 O2 O2 O 0 1 N N N 15.401 18.277 100.708 12.903 0.196 -1.097 LEU 2 O polymer 1 1 13 ? ? ? PRD_002489 C10 C10 C 0 1 N N N 16.013 17.647 97.609 15.063 0.381 1.232 LEU 2 CB polymer 1 1 14 ? ? ? PRD_002489 C11 C11 C 0 1 N N N 16.844 17.916 96.338 16.507 0.658 1.658 LEU 2 CG polymer 1 1 15 ? ? ? PRD_002489 C12 C12 C 0 1 N N N 17.343 16.626 95.658 16.513 1.333 3.030 LEU 2 CD1 polymer 1 1 16 ? ? ? PRD_002489 C13 C13 C 0 1 N N N 16.112 18.818 95.353 17.278 -0.661 1.735 LEU 2 CD2 polymer 1 1 17 ? ? ? PRD_002489 N3 N3 N 0 1 N N N 13.503 18.936 99.601 13.220 -1.841 -0.278 PRO 3 N polymer 1 1 18 ? ? ? PRD_002489 C14 C14 C 0 1 N N S 12.623 18.804 100.596 11.917 -2.405 -0.661 PRO 3 CA polymer 1 1 19 ? ? ? PRD_002489 C15 C15 C 0 1 N N N 12.542 17.370 101.156 10.806 -1.584 -0.059 PRO 3 C polymer 1 1 20 ? ? ? PRD_002489 O3 O3 O 0 1 N N N 12.694 16.444 100.425 11.069 -0.618 0.626 PRO 3 O polymer 1 1 21 ? ? ? PRD_002489 C16 C16 C 0 1 N N N 11.198 19.212 99.984 11.862 -3.846 -0.110 PRO 3 CB polymer 1 1 22 ? ? ? PRD_002489 C17 C17 C 0 1 N N N 11.414 19.136 98.442 12.906 -3.820 1.037 PRO 3 CG polymer 1 1 23 ? ? ? PRD_002489 C18 C18 C 0 1 N N N 12.746 19.479 98.280 13.983 -2.869 0.452 PRO 3 CD polymer 1 1 24 ? ? ? PRD_002489 N4 N4 N 0 1 N N N 12.276 17.189 102.595 9.521 -1.923 -0.281 ALA 4 N polymer 1 1 25 ? ? ? PRD_002489 C19 C19 C 0 1 N N S 12.157 15.861 103.167 8.441 -1.124 0.304 ALA 4 CA polymer 1 1 26 ? ? ? PRD_002489 C20 C20 C 0 1 N N N 10.951 15.329 102.397 7.208 -1.978 0.451 ALA 4 C polymer 1 1 27 ? ? ? PRD_002489 O4 O4 O 0 1 N N N 9.919 15.890 102.503 7.229 -3.139 0.102 ALA 4 O polymer 1 1 28 ? ? ? PRD_002489 C21 C21 C 0 1 N N N 11.788 15.965 104.632 8.133 0.064 -0.610 ALA 4 CB polymer 1 1 29 ? ? ? PRD_002489 N5 N5 N 0 1 N N N 11.045 14.196 101.479 6.082 -1.451 0.971 THR 5 N polymer 1 1 30 ? ? ? PRD_002489 C22 C22 C 0 1 N N S 9.788 13.881 100.807 4.883 -2.281 1.114 THR 5 CA polymer 1 1 31 ? ? ? PRD_002489 C23 C23 C 0 1 N N N 9.271 12.496 101.228 3.660 -1.401 1.114 THR 5 C polymer 1 1 32 ? ? ? PRD_002489 O5 O5 O 0 1 N N N 8.819 11.714 100.472 3.777 -0.199 1.231 THR 5 O polymer 1 1 33 ? ? ? PRD_002489 C24 C24 C 0 1 N N R 10.009 14.094 99.322 4.954 -3.056 2.432 THR 5 CB polymer 1 1 34 ? ? ? PRD_002489 O6 O6 O 0 1 N N N 11.378 13.958 99.067 4.966 -2.136 3.525 THR 5 OG1 polymer 1 1 35 ? ? ? PRD_002489 C25 C25 C 0 1 N N N 9.638 15.534 98.978 6.230 -3.898 2.460 THR 5 CG2 polymer 1 1 36 ? ? ? PRD_002489 N6 N6 N 0 1 N N N 9.329 12.161 102.654 2.435 -1.949 0.985 ALA 6 N polymer 1 1 37 ? ? ? PRD_002489 C26 C26 C 0 1 N N S 8.855 10.876 103.143 1.255 -1.087 0.875 ALA 6 CA polymer 1 1 38 ? ? ? PRD_002489 C27 C27 C 0 1 N N N 7.819 11.156 104.250 0.038 -1.840 1.348 ALA 6 C polymer 1 1 39 ? ? ? PRD_002489 O7 O7 O 0 1 N N N 7.964 12.097 104.966 0.146 -2.983 1.739 ALA 6 O polymer 1 1 40 ? ? ? PRD_002489 C28 C28 C 0 1 N N N 10.037 10.131 103.715 1.062 -0.672 -0.585 ALA 6 CB polymer 1 1 41 ? ? ? PRD_002489 N7 N7 N 0 1 N N N 6.658 10.274 104.429 -1.170 -1.242 1.336 ALA 7 N polymer 1 1 42 ? ? ? PRD_002489 C29 C29 C 0 1 N N S 5.700 10.568 105.490 -2.353 -1.974 1.796 ALA 7 CA polymer 1 1 43 ? ? ? PRD_002489 C30 C30 C 0 1 N N N 4.748 9.376 105.713 -3.585 -1.394 1.149 ALA 7 C polymer 1 1 44 ? ? ? PRD_002489 O8 O8 O 0 1 N N N 4.923 8.343 105.154 -3.485 -0.466 0.383 ALA 7 O polymer 1 1 45 ? ? ? PRD_002489 C31 C31 C 0 1 N N N 4.881 11.798 105.125 -2.470 -1.851 3.317 ALA 7 CB polymer 1 1 46 ? ? ? PRD_002489 C32 C32 C 0 1 N N N -4.943 21.212 106.755 -8.028 9.272 1.669 ACE 1 C polymer 2 2 47 ? ? ? PRD_002489 O9 O9 O 0 1 N N N -5.479 22.120 107.298 -7.114 9.206 0.876 ACE 1 O polymer 2 2 48 ? ? ? PRD_002489 C33 C33 C 0 1 N N N -4.848 21.226 105.234 -8.067 10.385 2.685 ACE 1 CH3 polymer 2 2 49 ? ? ? PRD_002489 N8 N8 N 0 1 N N N -4.398 20.094 107.528 -9.011 8.349 1.643 ALA 2 N polymer 2 2 50 ? ? ? PRD_002489 C34 C34 C 0 1 N N S -3.729 18.996 106.846 -8.974 7.268 0.656 ALA 2 CA polymer 2 2 51 ? ? ? PRD_002489 C35 C35 C 0 1 N N N -3.868 17.603 107.493 -10.373 6.769 0.404 ALA 2 C polymer 2 2 52 ? ? ? PRD_002489 O10 O10 O 0 1 N N N -4.433 17.431 108.524 -11.309 7.268 0.992 ALA 2 O polymer 2 2 53 ? ? ? PRD_002489 C36 C36 C 0 1 N N N -2.239 19.308 106.766 -8.111 6.121 1.188 ALA 2 CB polymer 2 2 54 ? ? ? PRD_002489 C37 C37 C 0 1 N N N -3.572 14.146 106.073 -12.605 6.145 -1.763 ZGL 3 CD polymer 2 2 55 ? ? ? PRD_002489 N9 N9 N 0 1 N N N -3.259 16.477 106.766 -10.584 5.768 -0.473 ZGL 3 N polymer 2 2 56 ? ? ? PRD_002489 O11 O11 O 0 1 N N N -3.471 14.509 104.951 -11.999 7.074 -2.255 ZGL 3 O2 polymer 2 2 57 ? ? ? PRD_002489 N10 N10 N 0 1 N N N -3.991 12.774 106.334 -13.869 5.885 -2.151 ZGL 3 N1 polymer 2 2 58 ? ? ? PRD_002489 C38 C38 C 0 1 N N R -3.265 15.103 107.235 -11.945 5.283 -0.718 ZGL 3 CA polymer 2 2 59 ? ? ? PRD_002489 C39 C39 C 0 1 N N N -1.850 14.845 107.762 -11.889 3.836 -1.212 ZGL 3 CB polymer 2 2 60 ? ? ? PRD_002489 C40 C40 C 0 1 N N N -2.006 12.733 109.107 -11.279 1.515 -0.589 ZGL 3 C polymer 2 2 61 ? ? ? PRD_002489 C41 C41 C 0 1 N N N -1.779 14.261 109.179 -11.334 2.940 -0.103 ZGL 3 CG polymer 2 2 62 ? ? ? PRD_002489 O12 O12 O 0 1 N N N -2.542 12.164 109.995 -11.649 1.242 -1.711 ZGL 3 O polymer 2 2 63 ? ? ? PRD_002489 N11 N11 N 0 1 N N N -1.522 12.042 107.904 -10.820 0.543 0.224 LYS 4 N polymer 2 2 64 ? ? ? PRD_002489 C42 C42 C 0 1 N N S -1.639 10.622 107.560 -10.767 -0.843 -0.248 LYS 4 CA polymer 2 2 65 ? ? ? PRD_002489 C43 C43 C 0 1 N N N -2.269 9.620 108.571 -12.108 -1.498 -0.036 LYS 4 C polymer 2 2 66 ? ? ? PRD_002489 O13 O13 O 0 1 N N N -2.042 8.477 108.375 -13.018 -0.869 0.462 LYS 4 O polymer 2 2 67 ? ? ? PRD_002489 C44 C44 C 0 1 N N N -0.353 10.061 106.914 -9.697 -1.608 0.533 LYS 4 CB polymer 2 2 68 ? ? ? PRD_002489 C45 C45 C 0 1 N N N 0.950 10.257 107.713 -8.319 -1.020 0.219 LYS 4 CG polymer 2 2 69 ? ? ? PRD_002489 C46 C46 C 0 1 N N N 1.664 8.902 108.007 -7.249 -1.785 1.000 LYS 4 CD polymer 2 2 70 ? ? ? PRD_002489 C47 C47 C 0 1 N N N 2.652 8.479 106.896 -5.871 -1.197 0.686 LYS 4 CE polymer 2 2 71 ? ? ? PRD_002489 N12 N12 N 1 1 N N N 3.612 9.555 106.630 -4.843 -1.931 1.436 LYS 4 NZ polymer 2 2 72 ? ? ? PRD_002489 N13 N13 N 0 1 N N N -3.158 9.968 109.712 -12.295 -2.782 -0.398 DAL 5 N polymer 2 2 73 ? ? ? PRD_002489 C48 C48 C 0 1 N N R -3.725 8.861 110.499 -13.599 -3.419 -0.191 DAL 5 CA polymer 2 2 74 ? ? ? PRD_002489 C49 C49 C 0 1 N N N -5.084 8.714 109.853 -13.680 -3.963 1.237 DAL 5 CB polymer 2 2 75 ? ? ? PRD_002489 C50 C50 C 0 1 N N N -4.097 9.051 111.984 -13.765 -4.552 -1.171 DAL 5 C polymer 2 2 76 ? ? ? PRD_002489 O14 O14 O 0 1 N N N -4.304 10.141 112.405 -12.883 -4.803 -1.964 DAL 5 O polymer 2 2 77 ? ? ? PRD_002489 N14 N14 N 0 1 N N N -4.284 7.894 112.899 -14.896 -5.286 -1.166 DAL 6 N polymer 2 2 78 ? ? ? PRD_002489 C51 C51 C 0 1 N N R -4.092 6.457 112.619 -15.058 -6.387 -2.118 DAL 6 CA polymer 2 2 79 ? ? ? PRD_002489 C52 C52 C 0 1 N N N -5.050 5.824 111.611 -15.593 -5.841 -3.444 DAL 6 CB polymer 2 2 80 ? ? ? PRD_002489 C53 C53 C 0 1 N N N -4.351 5.688 113.913 -16.030 -7.394 -1.561 DAL 6 C polymer 2 2 81 ? ? ? PRD_002489 O15 O15 O 0 1 N N N -4.202 4.437 113.938 -16.536 -7.211 -0.479 DAL 6 O polymer 2 2 82 ? ? ? PRD_002489 O16 O16 O 0 1 N Y N -4.736 6.306 114.946 -16.335 -8.495 -2.266 DAL 6 OXT polymer 2 2 83 ? ? ? PRD_002489 H1 H1 H 0 1 N N N 20.683 20.463 102.721 20.152 3.474 -3.450 BE2 1 H3 polymer 1 1 84 ? ? ? PRD_002489 H2 H2 H 0 0 N N N 19.129 18.841 102.482 19.311 0.819 -1.168 BE2 1 H polymer 1 1 85 ? ? ? PRD_002489 H3 H3 H 0 0 N N N 17.610 19.307 102.106 20.533 1.838 -1.706 BE2 1 H2 polymer 1 1 86 ? ? ? PRD_002489 H4 H4 H 0 1 N N N 21.544 22.670 102.030 18.511 4.748 -4.759 BE2 1 H4 polymer 1 1 87 ? ? ? PRD_002489 H5 H5 H 0 1 N N N 20.384 23.954 100.274 16.104 4.310 -4.501 BE2 1 H5 polymer 1 1 88 ? ? ? PRD_002489 H6 H6 H 0 1 N N N 18.347 23.041 99.219 15.319 2.587 -2.937 BE2 1 H6 polymer 1 1 89 ? ? ? PRD_002489 H7 H7 H 0 1 N N N 17.927 18.778 99.022 14.870 1.410 -1.588 LEU 2 H polymer 1 1 90 ? ? ? PRD_002489 H8 H8 H 0 1 N N N 15.421 19.702 97.853 15.710 -1.045 -0.247 LEU 2 HA polymer 1 1 91 ? ? ? PRD_002489 H9 H9 H 0 1 N N N 16.515 16.870 98.204 14.491 1.308 1.263 LEU 2 HB2 polymer 1 1 92 ? ? ? PRD_002489 H10 H10 H 0 1 N N N 15.015 17.294 97.312 14.617 -0.345 1.913 LEU 2 HB3 polymer 1 1 93 ? ? ? PRD_002489 H11 H11 H 0 1 N N N 17.741 18.465 96.662 16.981 1.314 0.928 LEU 2 HG polymer 1 1 94 ? ? ? PRD_002489 H12 H12 H 0 0 N N N 17.926 16.885 94.762 16.039 0.677 3.760 LEU 2 HD11 polymer 1 1 95 ? ? ? PRD_002489 H13 H13 H 0 0 N N N 17.978 16.064 96.359 17.541 1.531 3.333 LEU 2 HD12 polymer 1 1 96 ? ? ? PRD_002489 H14 H14 H 0 0 N N N 16.481 16.007 95.368 15.964 2.273 2.976 LEU 2 HD13 polymer 1 1 97 ? ? ? PRD_002489 H15 H15 H 0 0 N N N 16.742 18.981 94.466 17.273 -1.142 0.757 LEU 2 HD21 polymer 1 1 98 ? ? ? PRD_002489 H16 H16 H 0 0 N N N 15.169 18.340 95.050 18.306 -0.464 2.038 LEU 2 HD22 polymer 1 1 99 ? ? ? PRD_002489 H17 H17 H 0 0 N N N 15.896 19.785 95.832 16.804 -1.317 2.464 LEU 2 HD23 polymer 1 1 100 ? ? ? PRD_002489 H18 H18 H 0 1 N N N 12.843 19.492 101.425 11.823 -2.417 -1.747 PRO 3 HA polymer 1 1 101 ? ? ? PRD_002489 H19 H19 H 0 1 N N N 10.418 18.506 100.305 10.869 -4.073 0.277 PRO 3 HB2 polymer 1 1 102 ? ? ? PRD_002489 H20 H20 H 0 1 N N N 10.918 20.231 100.290 12.151 -4.564 -0.878 PRO 3 HB3 polymer 1 1 103 ? ? ? PRD_002489 H21 H21 H 0 1 N N N 11.223 18.119 98.069 12.473 -3.411 1.950 PRO 3 HG2 polymer 1 1 104 ? ? ? PRD_002489 H22 H22 H 0 1 N N N 10.759 19.848 97.919 13.318 -4.813 1.213 PRO 3 HG3 polymer 1 1 105 ? ? ? PRD_002489 H23 H23 H 0 1 N N N 12.853 20.571 98.198 14.640 -3.410 -0.229 PRO 3 HD2 polymer 1 1 106 ? ? ? PRD_002489 H24 H24 H 0 1 N N N 13.158 19.001 97.379 14.562 -2.412 1.256 PRO 3 HD3 polymer 1 1 107 ? ? ? PRD_002489 H25 H25 H 0 1 N N N 12.176 17.991 103.184 9.311 -2.695 -0.829 ALA 4 H polymer 1 1 108 ? ? ? PRD_002489 H26 H26 H 0 1 N N N 13.051 15.241 103.009 8.749 -0.759 1.283 ALA 4 HA polymer 1 1 109 ? ? ? PRD_002489 H27 H27 H 0 1 N N N 11.699 14.956 105.061 9.025 0.682 -0.716 ALA 4 HB1 polymer 1 1 110 ? ? ? PRD_002489 H28 H28 H 0 1 N N N 12.570 16.523 105.168 7.825 -0.301 -1.589 ALA 4 HB2 polymer 1 1 111 ? ? ? PRD_002489 H29 H29 H 0 1 N N N 10.827 16.492 104.732 7.329 0.658 -0.174 ALA 4 HB3 polymer 1 1 112 ? ? ? PRD_002489 H30 H30 H 0 1 N N N 11.891 13.685 101.326 6.065 -0.522 1.250 THR 5 H polymer 1 1 113 ? ? ? PRD_002489 H31 H31 H 0 1 N N N 9.037 14.616 101.133 4.825 -2.983 0.282 THR 5 HA polymer 1 1 114 ? ? ? PRD_002489 H32 H32 H 0 1 N N N 9.401 13.390 98.735 4.085 -3.709 2.516 THR 5 HB polymer 1 1 115 ? ? ? PRD_002489 H33 H33 H 0 1 N N N 11.542 14.087 98.140 4.185 -1.568 3.570 THR 5 HG1 polymer 1 1 116 ? ? ? PRD_002489 H34 H34 H 0 0 N N N 9.793 15.706 97.903 7.099 -3.241 2.494 THR 5 HG21 polymer 1 1 117 ? ? ? PRD_002489 H35 H35 H 0 0 N N N 8.582 15.710 99.229 6.224 -4.539 3.342 THR 5 HG22 polymer 1 1 118 ? ? ? PRD_002489 H36 H36 H 0 0 N N N 10.272 16.224 99.554 6.278 -4.516 1.563 THR 5 HG23 polymer 1 1 119 ? ? ? PRD_002489 H37 H37 H 0 1 N N N 9.701 12.827 103.301 2.335 -2.913 0.965 ALA 6 H polymer 1 1 120 ? ? ? PRD_002489 H38 H38 H 0 1 N N N 8.390 10.292 102.335 1.395 -0.199 1.490 ALA 6 HA polymer 1 1 121 ? ? ? PRD_002489 H39 H39 H 0 1 N N N 9.706 9.153 104.093 0.922 -1.560 -1.201 ALA 6 HB1 polymer 1 1 122 ? ? ? PRD_002489 H40 H40 H 0 1 N N N 10.793 9.984 102.929 0.184 -0.031 -0.667 ALA 6 HB2 polymer 1 1 123 ? ? ? PRD_002489 H41 H41 H 0 1 N N N 10.474 10.714 104.539 1.942 -0.127 -0.927 ALA 6 HB3 polymer 1 1 124 ? ? ? PRD_002489 H42 H42 H 0 1 N N N 6.526 9.483 103.832 -1.256 -0.328 1.023 ALA 7 H polymer 1 1 125 ? ? ? PRD_002489 H43 H43 H 0 1 N N N 6.238 10.766 106.429 -2.260 -3.025 1.523 ALA 7 HA polymer 1 1 126 ? ? ? PRD_002489 H44 H44 H 0 1 N N N 4.162 12.012 105.929 -3.350 -2.395 3.659 ALA 7 HB1 polymer 1 1 127 ? ? ? PRD_002489 H45 H45 H 0 1 N N N 5.552 12.660 104.994 -1.579 -2.270 3.784 ALA 7 HB2 polymer 1 1 128 ? ? ? PRD_002489 H46 H46 H 0 1 N N N 4.337 11.611 104.187 -2.563 -0.800 3.590 ALA 7 HB3 polymer 1 1 129 ? ? ? PRD_002489 H47 H47 H 0 1 N N N -5.323 22.138 104.845 -7.196 11.027 2.553 ACE 1 H1 polymer 2 2 130 ? ? ? PRD_002489 H48 H48 H 0 1 N N N -3.790 21.207 104.933 -8.975 10.971 2.547 ACE 1 H2 polymer 2 2 131 ? ? ? PRD_002489 H49 H49 H 0 1 N N N -5.362 20.343 104.827 -8.057 9.961 3.689 ACE 1 H3 polymer 2 2 132 ? ? ? PRD_002489 H50 H50 H 0 1 N N N -4.485 20.085 108.524 -9.742 8.402 2.278 ALA 2 H polymer 2 2 133 ? ? ? PRD_002489 H51 H51 H 0 1 N N N -4.116 18.928 105.819 -8.547 7.640 -0.275 ALA 2 HA polymer 2 2 134 ? ? ? PRD_002489 H52 H52 H 0 1 N N N -1.719 18.486 106.252 -8.538 5.748 2.120 ALA 2 HB1 polymer 2 2 135 ? ? ? PRD_002489 H53 H53 H 0 1 N N N -2.090 20.243 106.206 -8.084 5.316 0.454 ALA 2 HB2 polymer 2 2 136 ? ? ? PRD_002489 H54 H54 H 0 1 N N N -1.833 19.420 107.782 -7.099 6.482 1.370 ALA 2 HB3 polymer 2 2 137 ? ? ? PRD_002489 H55 H55 H 0 1 N N N -2.812 16.671 105.893 -9.835 5.369 -0.943 ZGL 3 H polymer 2 2 138 ? ? ? PRD_002489 H56 H56 H 0 1 N N N -4.187 12.158 105.571 -14.294 6.440 -2.824 ZGL 3 HN1 polymer 2 2 139 ? ? ? PRD_002489 H57 H57 H 0 0 N N N -4.082 12.449 107.276 -14.354 5.143 -1.758 ZGL 3 HN1A polymer 2 2 140 ? ? ? PRD_002489 H58 H58 H 0 1 N N N -3.999 14.962 108.042 -12.519 5.330 0.207 ZGL 3 HA polymer 2 2 141 ? ? ? PRD_002489 H59 H59 H 0 1 N N N -1.355 14.140 107.078 -12.893 3.504 -1.478 ZGL 3 HB polymer 2 2 142 ? ? ? PRD_002489 H60 H60 H 0 1 N N N -1.306 15.801 107.760 -11.242 3.775 -2.086 ZGL 3 HBA polymer 2 2 143 ? ? ? PRD_002489 H61 H61 H 0 1 N N N -0.789 14.467 109.613 -10.330 3.272 0.164 ZGL 3 HG polymer 2 2 144 ? ? ? PRD_002489 H62 H62 H 0 1 N N N -2.557 14.720 109.806 -11.981 3.001 0.772 ZGL 3 HGA polymer 2 2 145 ? ? ? PRD_002489 H63 H63 H 0 1 N N N -1.052 12.615 107.233 -10.525 0.761 1.122 LYS 4 H polymer 2 2 146 ? ? ? PRD_002489 H64 H64 H 0 1 N N N -2.358 10.614 106.727 -10.521 -0.856 -1.310 LYS 4 HA polymer 2 2 147 ? ? ? PRD_002489 H65 H65 H 0 1 N N N -0.496 8.981 106.765 -9.894 -1.520 1.601 LYS 4 HB2 polymer 2 2 148 ? ? ? PRD_002489 H66 H66 H 0 1 N N N -0.226 10.552 105.938 -9.718 -2.659 0.245 LYS 4 HB3 polymer 2 2 149 ? ? ? PRD_002489 H67 H67 H 0 1 N N N 1.630 10.898 107.132 -8.122 -1.108 -0.849 LYS 4 HG2 polymer 2 2 150 ? ? ? PRD_002489 H68 H68 H 0 1 N N N 0.711 10.747 108.668 -8.298 0.031 0.507 LYS 4 HG3 polymer 2 2 151 ? ? ? PRD_002489 H69 H69 H 0 1 N N N 2.220 8.998 108.951 -7.446 -1.697 2.069 LYS 4 HD2 polymer 2 2 152 ? ? ? PRD_002489 H70 H70 H 0 1 N N N 0.898 8.119 108.110 -7.270 -2.836 0.712 LYS 4 HD3 polymer 2 2 153 ? ? ? PRD_002489 H71 H71 H 0 1 N N N 3.196 7.579 107.218 -5.674 -1.285 -0.382 LYS 4 HE2 polymer 2 2 154 ? ? ? PRD_002489 H72 H72 H 0 1 N N N 2.091 8.258 105.976 -5.850 -0.146 0.975 LYS 4 HE3 polymer 2 2 155 ? ? ? PRD_002489 H73 H73 H 0 1 N N N 3.080 10.322 106.271 -4.863 -2.904 1.169 LYS 4 HZ2 polymer 2 2 156 ? ? ? PRD_002489 H74 H74 H 0 1 N N N 4.004 9.806 107.515 -5.026 -1.850 2.425 LYS 4 HZ3 polymer 2 2 157 ? ? ? PRD_002489 H75 H75 H 0 1 N N N -3.363 10.921 109.936 -11.568 -3.285 -0.795 DAL 5 H polymer 2 2 158 ? ? ? PRD_002489 H76 H76 H 0 1 N N N -3.135 7.941 110.371 -14.390 -2.685 -0.346 DAL 5 HA polymer 2 2 159 ? ? ? PRD_002489 H77 H77 H 0 1 N N N -5.640 7.903 110.347 -12.889 -4.697 1.391 DAL 5 HB1 polymer 2 2 160 ? ? ? PRD_002489 H78 H78 H 0 1 N N N -5.642 9.656 109.955 -13.559 -3.144 1.945 DAL 5 HB2 polymer 2 2 161 ? ? ? PRD_002489 H79 H79 H 0 1 N N N -4.959 8.476 108.786 -14.649 -4.437 1.390 DAL 5 HB3 polymer 2 2 162 ? ? ? PRD_002489 H80 H80 H 0 1 N N N -4.579 8.119 113.828 -15.602 -5.085 -0.532 DAL 6 H polymer 2 2 163 ? ? ? PRD_002489 H81 H81 H 0 1 N N N -3.057 6.276 112.294 -14.094 -6.868 -2.286 DAL 6 HA polymer 2 2 164 ? ? ? PRD_002489 H82 H82 H 0 1 N N N -4.805 4.758 111.491 -16.557 -5.361 -3.276 DAL 6 HB1 polymer 2 2 165 ? ? ? PRD_002489 H83 H83 H 0 1 N N N -6.083 5.924 111.975 -14.889 -5.113 -3.847 DAL 6 HB2 polymer 2 2 166 ? ? ? PRD_002489 H84 H84 H 0 1 N N N -4.952 6.335 110.642 -15.713 -6.661 -4.152 DAL 6 HB3 polymer 2 2 167 ? ? ? PRD_002489 H85 H85 H 0 1 N Y N -4.870 5.687 115.654 -16.964 -9.112 -1.867 DAL 6 HXT polymer 2 2 168 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002489 C1 O1 DOUB N N 1 PRD_002489 C1 C2 SING N N 2 PRD_002489 C2 C3 DOUB Y N 3 PRD_002489 C2 C7 SING Y N 4 PRD_002489 C3 C4 SING Y N 5 PRD_002489 C3 N1 SING N N 6 PRD_002489 C4 C5 DOUB Y N 7 PRD_002489 C4 H1 SING N N 8 PRD_002489 N1 H2 SING N N 9 PRD_002489 N1 H3 SING N N 10 PRD_002489 C5 C6 SING Y N 11 PRD_002489 C5 H4 SING N N 12 PRD_002489 C6 C7 DOUB Y N 13 PRD_002489 C6 H5 SING N N 14 PRD_002489 C7 H6 SING N N 15 PRD_002489 N2 C8 SING N N 16 PRD_002489 N2 H7 SING N N 17 PRD_002489 C8 C9 SING N N 18 PRD_002489 C8 C10 SING N N 19 PRD_002489 C8 H8 SING N N 20 PRD_002489 C9 O2 DOUB N N 21 PRD_002489 C10 C11 SING N N 22 PRD_002489 C10 H9 SING N N 23 PRD_002489 C10 H10 SING N N 24 PRD_002489 C11 C12 SING N N 25 PRD_002489 C11 C13 SING N N 26 PRD_002489 C11 H11 SING N N 27 PRD_002489 C12 H12 SING N N 28 PRD_002489 C12 H13 SING N N 29 PRD_002489 C12 H14 SING N N 30 PRD_002489 C13 H15 SING N N 31 PRD_002489 C13 H16 SING N N 32 PRD_002489 C13 H17 SING N N 33 PRD_002489 N3 C14 SING N N 34 PRD_002489 N3 C18 SING N N 35 PRD_002489 C14 C15 SING N N 36 PRD_002489 C14 C16 SING N N 37 PRD_002489 C14 H18 SING N N 38 PRD_002489 C15 O3 DOUB N N 39 PRD_002489 C16 C17 SING N N 40 PRD_002489 C16 H19 SING N N 41 PRD_002489 C16 H20 SING N N 42 PRD_002489 C17 C18 SING N N 43 PRD_002489 C17 H21 SING N N 44 PRD_002489 C17 H22 SING N N 45 PRD_002489 C18 H23 SING N N 46 PRD_002489 C18 H24 SING N N 47 PRD_002489 N4 C19 SING N N 48 PRD_002489 N4 H25 SING N N 49 PRD_002489 C19 C20 SING N N 50 PRD_002489 C19 C21 SING N N 51 PRD_002489 C19 H26 SING N N 52 PRD_002489 C20 O4 DOUB N N 53 PRD_002489 C21 H27 SING N N 54 PRD_002489 C21 H28 SING N N 55 PRD_002489 C21 H29 SING N N 56 PRD_002489 N5 C22 SING N N 57 PRD_002489 N5 H30 SING N N 58 PRD_002489 C22 C23 SING N N 59 PRD_002489 C22 C24 SING N N 60 PRD_002489 C22 H31 SING N N 61 PRD_002489 C23 O5 DOUB N N 62 PRD_002489 C24 O6 SING N N 63 PRD_002489 C24 C25 SING N N 64 PRD_002489 C24 H32 SING N N 65 PRD_002489 O6 H33 SING N N 66 PRD_002489 C25 H34 SING N N 67 PRD_002489 C25 H35 SING N N 68 PRD_002489 C25 H36 SING N N 69 PRD_002489 N6 C26 SING N N 70 PRD_002489 N6 H37 SING N N 71 PRD_002489 C26 C27 SING N N 72 PRD_002489 C26 C28 SING N N 73 PRD_002489 C26 H38 SING N N 74 PRD_002489 C27 O7 DOUB N N 75 PRD_002489 C28 H39 SING N N 76 PRD_002489 C28 H40 SING N N 77 PRD_002489 C28 H41 SING N N 78 PRD_002489 N7 C29 SING N N 79 PRD_002489 N7 H42 SING N N 80 PRD_002489 C29 C30 SING N N 81 PRD_002489 C29 C31 SING N N 82 PRD_002489 C29 H43 SING N N 83 PRD_002489 C30 O8 DOUB N N 84 PRD_002489 C31 H44 SING N N 85 PRD_002489 C31 H45 SING N N 86 PRD_002489 C31 H46 SING N N 87 PRD_002489 C32 O9 DOUB N N 88 PRD_002489 C32 C33 SING N N 89 PRD_002489 C33 H47 SING N N 90 PRD_002489 C33 H48 SING N N 91 PRD_002489 C33 H49 SING N N 92 PRD_002489 N8 C34 SING N N 93 PRD_002489 N8 H50 SING N N 94 PRD_002489 C34 C35 SING N N 95 PRD_002489 C34 C36 SING N N 96 PRD_002489 C34 H51 SING N N 97 PRD_002489 C35 O10 DOUB N N 98 PRD_002489 C36 H52 SING N N 99 PRD_002489 C36 H53 SING N N 100 PRD_002489 C36 H54 SING N N 101 PRD_002489 N10 C37 SING N N 102 PRD_002489 C37 O11 DOUB N N 103 PRD_002489 C37 C38 SING N N 104 PRD_002489 N9 C38 SING N N 105 PRD_002489 N9 H55 SING N N 106 PRD_002489 N10 H56 SING N N 107 PRD_002489 N10 H57 SING N N 108 PRD_002489 C39 C38 SING N N 109 PRD_002489 C38 H58 SING N N 110 PRD_002489 C39 C41 SING N N 111 PRD_002489 C39 H59 SING N N 112 PRD_002489 C39 H60 SING N N 113 PRD_002489 C41 C40 SING N N 114 PRD_002489 O12 C40 DOUB N N 115 PRD_002489 C41 H61 SING N N 116 PRD_002489 C41 H62 SING N N 117 PRD_002489 N11 C42 SING N N 118 PRD_002489 N11 H63 SING N N 119 PRD_002489 C42 C43 SING N N 120 PRD_002489 C42 C44 SING N N 121 PRD_002489 C42 H64 SING N N 122 PRD_002489 C43 O13 DOUB N N 123 PRD_002489 C44 C45 SING N N 124 PRD_002489 C44 H65 SING N N 125 PRD_002489 C44 H66 SING N N 126 PRD_002489 C45 C46 SING N N 127 PRD_002489 C45 H67 SING N N 128 PRD_002489 C45 H68 SING N N 129 PRD_002489 C46 C47 SING N N 130 PRD_002489 C46 H69 SING N N 131 PRD_002489 C46 H70 SING N N 132 PRD_002489 C47 N12 SING N N 133 PRD_002489 C47 H71 SING N N 134 PRD_002489 C47 H72 SING N N 135 PRD_002489 N12 H73 SING N N 136 PRD_002489 N12 H74 SING N N 137 PRD_002489 N13 C48 SING N N 138 PRD_002489 N13 H75 SING N N 139 PRD_002489 C48 C49 SING N N 140 PRD_002489 C48 C50 SING N N 141 PRD_002489 C48 H76 SING N N 142 PRD_002489 C49 H77 SING N N 143 PRD_002489 C49 H78 SING N N 144 PRD_002489 C49 H79 SING N N 145 PRD_002489 C50 O14 DOUB N N 146 PRD_002489 N14 C51 SING N N 147 PRD_002489 N14 H80 SING N N 148 PRD_002489 C51 C52 SING N N 149 PRD_002489 C51 C53 SING N N 150 PRD_002489 C51 H81 SING N N 151 PRD_002489 C52 H82 SING N N 152 PRD_002489 C52 H83 SING N N 153 PRD_002489 C52 H84 SING N N 154 PRD_002489 C53 O15 DOUB N N 155 PRD_002489 C53 O16 SING N N 156 PRD_002489 O16 H85 SING N N 157 PRD_002489 C1 N2 SING N N 158 PRD_002489 C9 N3 SING N N 159 PRD_002489 C15 N4 SING N N 160 PRD_002489 C20 N5 SING N N 161 PRD_002489 C23 N6 SING N N 162 PRD_002489 C27 N7 SING N N 163 PRD_002489 C32 N8 SING N N 164 PRD_002489 C35 N9 SING N N 165 PRD_002489 C40 N11 SING N N 166 PRD_002489 C43 N13 SING N N 167 PRD_002489 C50 N14 SING N N 168 PRD_002489 C30 N12 SING N N 169 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002489 SMILES ACDLabs 12.01 "O=C(NC(C)C(=O)NC(C(=O)NC(C)C(=O)NC(C)C(=O)[NH2+]CCCCC(NC(=O)CCC(NC(=O)C(C)NC(C)=O)C(N)=O)C(=O)NC(C)C(=O)NC(C)C(=O)O)C(C)O)C1CCCN1C(=O)C(CC(C)C)NC(=O)c1ccccc1N" PRD_002489 InChI InChI 1.06 "InChI=1S/C53H84N14O16/c1-25(2)24-38(65-48(77)34-16-11-12-17-35(34)54)52(81)67-23-15-19-39(67)50(79)60-30(7)47(76)66-41(32(9)68)51(80)61-29(6)44(73)58-26(3)43(72)56-22-14-13-18-37(49(78)59-28(5)45(74)62-31(8)53(82)83)63-40(70)21-20-36(42(55)71)64-46(75)27(4)57-33(10)69/h11-12,16-17,25-32,36-39,41,68H,13-15,18-24,54H2,1-10H3,(H2,55,71)(H,56,72)(H,57,69)(H,58,73)(H,59,78)(H,60,79)(H,61,80)(H,62,74)(H,63,70)(H,64,75)(H,65,77)(H,66,76)(H,82,83)/p+1/t26-,27-,28+,29-,30-,31+,32+,36+,37-,38-,39-,41-/m0/s1" PRD_002489 InChIKey InChI 1.06 MWNSMXOOHKKRDC-QYUXVVCRSA-O PRD_002489 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)c1ccccc1N)C(=O)N2CCC[C@H]2C(=O)N[C@@H](C)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)[NH2+]CCCC[C@H](NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(C)=O)C(N)=O)C(=O)N[C@H](C)C(=O)N[C@H](C)C(O)=O" PRD_002489 SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)c1ccccc1N)C(=O)N2CCC[CH]2C(=O)N[CH](C)C(=O)N[CH]([CH](C)O)C(=O)N[CH](C)C(=O)N[CH](C)C(=O)[NH2+]CCCC[CH](NC(=O)CC[CH](NC(=O)[CH](C)NC(C)=O)C(N)=O)C(=O)N[CH](C)C(=O)N[CH](C)C(O)=O" PRD_002489 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@@H](C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)[NH2+]CCCC[C@@H](C(=O)N[C@H](C)C(=O)N[C@H](C)C(=O)O)NC(=O)CC[C@H](C(=O)N)NC(=O)[C@H](C)NC(=O)C)NC(=O)[C@H](C)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)c2ccccc2N)O" PRD_002489 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)N1CCCC1C(=O)NC(C)C(=O)NC(C(C)O)C(=O)NC(C)C(=O)NC(C)C(=O)[NH2+]CCCCC(C(=O)NC(C)C(=O)NC(C)C(=O)O)NC(=O)CCC(C(=O)N)NC(=O)C(C)NC(=O)C)NC(=O)c2ccccc2N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_002489 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alanyl-D-alpha-glutaminyl-6-{[(2R)-2-{[N-(2-aminobenzoyl)-L-leucyl-L-prolyl-L-alanyl-L-threonyl-L-alanyl]amino}propanoyl]azaniumyl}-L-norleucyl-D-alanyl-D-alanine" PRD_002489 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(5~{S})-5-[[(4~{R})-4-[[(2~{S})-2-acetamidopropanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoyl]amino]-6-oxidanylidene-6-[[(2~{R})-1-oxidanylidene-1-[[(2~{R})-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]propan-2-yl]amino]hexyl]-[(2~{S})-2-[[(2~{S})-2-[[(2~{S},3~{R})-2-[[(2~{S})-2-[[(2~{S})-1-[(2~{S})-2-[(2-aminophenyl)carbonylamino]-4-methyl-pentanoyl]pyrrolidin-2-yl]carbonylamino]propanoyl]amino]-3-oxidanyl-butanoyl]amino]propanoyl]amino]propanoyl]azanium" #