data_PRDCC_002539 # _chem_comp.id PRD_002539 _chem_comp.name "[FIP-HRC]2-PEG11" _chem_comp.formula "C28 H29 N3 O6" _chem_comp.formula_weight 503.546 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.pdbx_ordinal PRD_002539 C1 C1 C 0 1 N N N 201.010 183.969 190.016 4.983 0.049 -0.458 P6S 1 C21 polymer 1 1 N N N 1 PRD_002539 C2 C2 C 0 1 Y N N 200.988 182.884 188.876 6.078 0.860 0.186 P6S 1 C22 polymer 1 1 N N N 2 PRD_002539 C3 C3 C 0 1 Y N N 200.901 182.278 186.487 7.372 2.871 0.309 P6S 1 C24 polymer 1 1 N N N 3 PRD_002539 C4 C4 C 0 1 Y N N 201.025 180.535 188.107 7.794 1.081 1.842 P6S 1 C26 polymer 1 1 N N N 4 PRD_002539 C5 C5 C 0 1 N N N 200.500 186.322 189.281 2.635 -0.324 -0.253 P6S 1 C19 polymer 1 1 Y N Y 5 PRD_002539 C6 C6 C 0 1 Y N N 200.920 183.226 187.519 6.367 2.127 -0.283 P6S 1 C23 polymer 1 1 N N N 6 PRD_002539 C7 C7 C 0 1 Y N N 200.954 180.920 186.770 8.086 2.346 1.370 P6S 1 C25 polymer 1 1 N N N 7 PRD_002539 C8 C8 C 0 1 Y N N 201.043 181.497 189.129 6.789 0.338 1.251 P6S 1 C27 polymer 1 1 N N N 8 PRD_002539 O1 O1 O 0 1 N N N 200.100 185.088 189.871 3.722 0.325 0.206 P6S 1 O20 polymer 1 1 N N N 9 PRD_002539 O2 O2 O 0 1 N N N 201.533 186.792 189.722 2.738 -1.099 -1.183 P6S 1 O28 polymer 1 1 Y N Y 10 PRD_002539 N1 N1 N 0 1 N N N 199.717 186.926 188.250 1.433 -0.113 0.319 PHE 2 N polymer 1 1 Y Y N 11 PRD_002539 C9 C9 C 0 1 N N S 200.032 188.185 187.426 0.250 -0.819 -0.180 PHE 2 CA polymer 1 1 Y N N 12 PRD_002539 C10 C10 C 0 1 N N N 201.020 187.882 186.190 -0.986 -0.022 0.148 PHE 2 C polymer 1 1 Y N Y 13 PRD_002539 O3 O3 O 0 1 N N N 200.732 186.885 185.510 -0.889 1.032 0.740 PHE 2 O polymer 1 1 Y N Y 14 PRD_002539 C11 C11 C 0 1 N N N 200.582 189.398 188.301 0.160 -2.195 0.482 PHE 2 CB polymer 1 1 N N N 15 PRD_002539 C12 C12 C 0 1 Y N N 199.667 190.182 189.272 1.336 -3.036 0.055 PHE 2 CG polymer 1 1 N N N 16 PRD_002539 C13 C13 C 0 1 Y N N 200.058 190.533 190.584 2.505 -3.013 0.792 PHE 2 CD1 polymer 1 1 N N N 17 PRD_002539 C14 C14 C 0 1 Y N N 198.377 190.601 188.922 1.243 -3.833 -1.070 PHE 2 CD2 polymer 1 1 N N N 18 PRD_002539 C15 C15 C 0 1 Y N N 199.226 191.242 191.461 3.584 -3.784 0.401 PHE 2 CE1 polymer 1 1 N N N 19 PRD_002539 C16 C16 C 0 1 Y N N 197.534 191.309 189.788 2.322 -4.604 -1.462 PHE 2 CE2 polymer 1 1 N N N 20 PRD_002539 C17 C17 C 0 1 Y N N 197.951 191.638 191.070 3.493 -4.578 -0.728 PHE 2 CZ polymer 1 1 N N N 21 PRD_002539 N2 N2 N 0 1 N N N 202.176 188.596 185.758 -2.200 -0.480 -0.218 PHE 3 N polymer 1 1 Y Y N 22 PRD_002539 C18 C18 C 0 1 N N S 203.026 188.222 184.579 -3.402 0.295 0.101 PHE 3 CA polymer 1 1 Y N N 23 PRD_002539 C19 C19 C 0 1 N N N 203.819 186.859 184.893 -4.591 -0.628 0.170 PHE 3 C polymer 1 1 Y N Y 24 PRD_002539 O4 O4 O 0 1 N N N 204.476 186.845 185.940 -4.449 -1.816 -0.028 PHE 3 O polymer 1 1 Y N Y 25 PRD_002539 C20 C20 C 0 1 N N N 204.021 189.412 184.043 -3.634 1.346 -0.986 PHE 3 CB polymer 1 1 N N N 26 PRD_002539 C21 C21 C 0 1 Y N N 203.399 190.696 183.427 -2.502 2.342 -0.972 PHE 3 CG polymer 1 1 N N N 27 PRD_002539 C22 C22 C 0 1 Y N N 203.060 190.826 182.062 -1.380 2.122 -1.748 PHE 3 CD1 polymer 1 1 N N N 28 PRD_002539 C23 C23 C 0 1 Y N N 203.133 191.832 184.200 -2.590 3.477 -0.188 PHE 3 CD2 polymer 1 1 N N N 29 PRD_002539 C24 C24 C 0 1 Y N N 202.501 191.992 181.524 -0.342 3.036 -1.735 PHE 3 CE1 polymer 1 1 N N N 30 PRD_002539 C25 C25 C 0 1 Y N N 202.576 193.005 183.677 -1.552 4.390 -0.175 PHE 3 CE2 polymer 1 1 N N N 31 PRD_002539 C26 C26 C 0 1 Y N N 202.253 193.097 182.330 -0.427 4.168 -0.947 PHE 3 CZ polymer 1 1 N N N 32 PRD_002539 N3 N3 N 0 1 N N N 203.812 185.732 184.079 -5.813 -0.133 0.451 GLY 4 N polymer 1 1 Y Y N 33 PRD_002539 C27 C27 C 0 1 N N N 204.529 184.443 184.318 -6.969 -1.031 0.517 GLY 4 CA polymer 1 1 Y N N 34 PRD_002539 C28 C28 C 0 1 N N N 203.572 183.189 184.411 -8.205 -0.234 0.845 GLY 4 C polymer 1 1 Y N Y 35 PRD_002539 O5 O5 O 0 1 N N N 203.940 182.178 185.028 -8.128 0.961 1.007 GLY 4 O polymer 1 1 Y N Y 36 PRD_002539 O6 O6 O 0 1 N Y N 202.448 183.303 183.830 -9.391 -0.851 0.958 GLY 4 OXT polymer 1 1 Y N Y 37 PRD_002539 H1 H1 H 0 1 N N N 202.030 184.376 190.069 4.905 0.317 -1.512 P6S 1 H7 polymer 1 1 N N N 38 PRD_002539 H2 H2 H 0 1 N N N 200.767 183.463 190.962 5.216 -1.012 -0.370 P6S 1 H8 polymer 1 1 N N N 39 PRD_002539 H3 H3 H 0 1 N N N 200.844 182.607 185.460 7.601 3.859 -0.060 P6S 1 H9 polymer 1 1 N N N 40 PRD_002539 H4 H4 H 0 1 N N N 201.068 179.485 188.359 8.349 0.673 2.674 P6S 1 H10 polymer 1 1 N N N 41 PRD_002539 H5 H5 H 0 1 N N N 200.880 184.273 187.255 5.809 2.537 -1.112 P6S 1 H20 polymer 1 1 N N N 42 PRD_002539 H6 H6 H 0 1 N N N 200.940 180.185 185.979 8.871 2.927 1.832 P6S 1 H21 polymer 1 1 N N N 43 PRD_002539 H7 H7 H 0 1 N N N 201.100 181.160 190.153 6.560 -0.651 1.620 P6S 1 H22 polymer 1 1 N N N 44 PRD_002539 H8 H8 H 0 1 N N N 198.853 186.470 188.037 1.351 0.506 1.061 PHE 2 H polymer 1 1 Y Y N 45 PRD_002539 H9 H9 H 0 1 N N N 199.083 188.526 186.985 0.329 -0.940 -1.261 PHE 2 HA polymer 1 1 Y N N 46 PRD_002539 H10 H10 H 0 1 N N N 201.404 188.993 188.909 0.171 -2.078 1.566 PHE 2 HB2 polymer 1 1 N N N 47 PRD_002539 H11 H11 H 0 1 N N N 200.982 190.136 187.590 -0.765 -2.684 0.179 PHE 2 HB3 polymer 1 1 N N N 48 PRD_002539 H12 H12 H 0 1 N N N 201.041 190.243 190.925 2.576 -2.393 1.674 PHE 2 HD1 polymer 1 1 N N N 49 PRD_002539 H13 H13 H 0 1 N N N 198.013 190.366 187.933 0.328 -3.854 -1.643 PHE 2 HD2 polymer 1 1 N N N 50 PRD_002539 H14 H14 H 0 1 N N N 199.579 191.484 192.453 4.497 -3.767 0.976 PHE 2 HE1 polymer 1 1 N N N 51 PRD_002539 H15 H15 H 0 1 N N N 196.549 191.603 189.454 2.249 -5.228 -2.340 PHE 2 HE2 polymer 1 1 N N N 52 PRD_002539 H16 H16 H 0 1 N N N 197.305 192.183 191.743 4.335 -5.180 -1.034 PHE 2 HZ polymer 1 1 N N N 53 PRD_002539 H17 H17 H 0 1 N N N 202.440 189.407 186.280 -2.278 -1.323 -0.691 PHE 3 H polymer 1 1 Y Y N 54 PRD_002539 H18 H18 H 0 1 N N N 202.348 187.997 183.742 -3.270 0.790 1.063 PHE 3 HA polymer 1 1 Y N N 55 PRD_002539 H19 H19 H 0 1 N N N 204.633 189.729 184.900 -3.677 0.858 -1.960 PHE 3 HB2 polymer 1 1 N N N 56 PRD_002539 H20 H20 H 0 1 N N N 204.669 188.967 183.274 -4.575 1.863 -0.797 PHE 3 HB3 polymer 1 1 N N N 57 PRD_002539 H21 H21 H 0 1 N N N 203.240 189.988 181.404 -1.313 1.238 -2.364 PHE 3 HD1 polymer 1 1 N N N 58 PRD_002539 H22 H22 H 0 1 N N N 203.370 191.802 185.253 -3.469 3.650 0.415 PHE 3 HD2 polymer 1 1 N N N 59 PRD_002539 H23 H23 H 0 1 N N N 202.261 192.033 180.472 0.536 2.864 -2.341 PHE 3 HE1 polymer 1 1 N N N 60 PRD_002539 H24 H24 H 0 1 N N N 202.396 193.847 184.328 -1.621 5.276 0.438 PHE 3 HE2 polymer 1 1 N N N 61 PRD_002539 H25 H25 H 0 1 N N N 201.822 193.999 181.921 0.384 4.881 -0.937 PHE 3 HZ polymer 1 1 N N N 62 PRD_002539 H26 H26 H 0 1 N N N 203.267 185.791 183.243 -5.926 0.817 0.609 GLY 4 H polymer 1 1 Y Y N 63 PRD_002539 H27 H27 H 0 1 N N N 205.234 184.280 183.490 -7.100 -1.526 -0.445 GLY 4 HA2 polymer 1 1 Y N N 64 PRD_002539 H28 H28 H 0 1 N N N 205.085 184.526 185.264 -6.803 -1.780 1.292 GLY 4 HA3 polymer 1 1 Y N N 65 PRD_002539 H29 H29 H 0 1 N Y N 201.950 182.503 183.945 -10.156 -0.298 1.169 GLY 4 HXT polymer 1 1 Y N Y 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002539 C1 O1 SING N N 1 PRD_002539 C1 C2 SING N N 2 PRD_002539 C2 C8 DOUB Y N 3 PRD_002539 C2 C6 SING Y N 4 PRD_002539 C3 C7 SING Y N 5 PRD_002539 C3 C6 DOUB Y N 6 PRD_002539 C4 C8 SING Y N 7 PRD_002539 C4 C7 DOUB Y N 8 PRD_002539 C5 O1 SING N N 9 PRD_002539 C5 O2 DOUB N N 10 PRD_002539 C1 H1 SING N N 11 PRD_002539 C1 H2 SING N N 12 PRD_002539 C3 H3 SING N N 13 PRD_002539 C4 H4 SING N N 14 PRD_002539 C6 H5 SING N N 15 PRD_002539 C7 H6 SING N N 16 PRD_002539 C8 H7 SING N N 17 PRD_002539 N1 C9 SING N N 18 PRD_002539 N1 H8 SING N N 19 PRD_002539 C9 C10 SING N N 20 PRD_002539 C9 C11 SING N N 21 PRD_002539 C9 H9 SING N N 22 PRD_002539 C10 O3 DOUB N N 23 PRD_002539 C11 C12 SING N N 24 PRD_002539 C11 H10 SING N N 25 PRD_002539 C11 H11 SING N N 26 PRD_002539 C12 C13 DOUB Y N 27 PRD_002539 C12 C14 SING Y N 28 PRD_002539 C13 C15 SING Y N 29 PRD_002539 C13 H12 SING N N 30 PRD_002539 C14 C16 DOUB Y N 31 PRD_002539 C14 H13 SING N N 32 PRD_002539 C15 C17 DOUB Y N 33 PRD_002539 C15 H14 SING N N 34 PRD_002539 C16 C17 SING Y N 35 PRD_002539 C16 H15 SING N N 36 PRD_002539 C17 H16 SING N N 37 PRD_002539 N2 C18 SING N N 38 PRD_002539 N2 H17 SING N N 39 PRD_002539 C18 C19 SING N N 40 PRD_002539 C18 C20 SING N N 41 PRD_002539 C18 H18 SING N N 42 PRD_002539 C19 O4 DOUB N N 43 PRD_002539 C20 C21 SING N N 44 PRD_002539 C20 H19 SING N N 45 PRD_002539 C20 H20 SING N N 46 PRD_002539 C21 C22 DOUB Y N 47 PRD_002539 C21 C23 SING Y N 48 PRD_002539 C22 C24 SING Y N 49 PRD_002539 C22 H21 SING N N 50 PRD_002539 C23 C25 DOUB Y N 51 PRD_002539 C23 H22 SING N N 52 PRD_002539 C24 C26 DOUB Y N 53 PRD_002539 C24 H23 SING N N 54 PRD_002539 C25 C26 SING Y N 55 PRD_002539 C25 H24 SING N N 56 PRD_002539 C26 H25 SING N N 57 PRD_002539 N3 C27 SING N N 58 PRD_002539 N3 H26 SING N N 59 PRD_002539 C27 C28 SING N N 60 PRD_002539 C27 H27 SING N N 61 PRD_002539 C27 H28 SING N N 62 PRD_002539 C28 O5 DOUB N N 63 PRD_002539 C28 O6 SING N N 64 PRD_002539 O6 H29 SING N N 65 PRD_002539 C5 N1 SING N N 66 PRD_002539 C10 N2 SING N N 67 PRD_002539 C19 N3 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002539 SMILES ACDLabs 12.01 "O=C(O)CNC(=O)C(Cc1ccccc1)NC(=O)C(Cc1ccccc1)NC(=O)OCc1ccccc1" PRD_002539 SMILES_CANONICAL CACTVS 3.385 "OC(=O)CNC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3" PRD_002539 SMILES CACTVS 3.385 "OC(=O)CNC(=O)[CH](Cc1ccccc1)NC(=O)[CH](Cc2ccccc2)NC(=O)OCc3ccccc3" PRD_002539 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C[C@@H](C(=O)NCC(=O)O)NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3" PRD_002539 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC(C(=O)NCC(=O)O)NC(=O)C(Cc2ccccc2)NC(=O)OCc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_002539 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-phenylalanyl-L-phenylalanylglycine" PRD_002539 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[(2~{S})-3-phenyl-2-[[(2~{S})-3-phenyl-2-(phenylmethoxycarbonylamino)propanoyl]amino]propanoyl]amino]ethanoic acid" #