data_PRDCC_900023
#
_chem_comp.id PRD_900023
_chem_comp.name 4-O-beta-D-glucopyranosyl-alpha-D-glucopyranose
_chem_comp.type saccharide
_chem_comp.formula "C12 H22 O11"
_chem_comp.pdbx_release_status REF_ONLY
_chem_comp.formula_weight 342.296
_chem_comp.pdbx_type ?
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge ?
_chem_comp.pdbx_initial_date ?
_chem_comp.pdbx_modified_date ?
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ?
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag ?
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag ?
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_pcm ?
_chem_comp.pdbx_processing_site ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_ref_id
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
PRD_900023 "C1'" C7 C 0 1 N N S -25.028 16.026 -6.321 -4.001 -0.775 -0.084 GLC 1 C1 polymer 1 1 1 ? ? ?
PRD_900023 "C2'" C8 C 0 1 N N R -25.943 15.261 -7.182 -2.785 -1.700 -0.187 GLC 1 C2 polymer 1 1 2 ? ? ?
PRD_900023 "C3'" C9 C 0 1 N N R -26.055 13.842 -6.629 -1.578 -1.018 0.464 GLC 1 C3 polymer 1 1 3 ? ? ?
PRD_900023 "C4'" C10 C 0 1 N N S -24.647 13.212 -6.518 -1.339 0.332 -0.218 GLC 1 C4 polymer 1 1 4 ? ? ?
PRD_900023 "C5'" C11 C 0 1 N N R -23.670 14.111 -5.780 -2.610 1.179 -0.115 GLC 1 C5 polymer 1 1 5 ? ? ?
PRD_900023 "C6'" C12 C 0 1 N N N -22.233 13.592 -5.818 -2.400 2.507 -0.846 GLC 1 C6 polymer 1 1 6 ? ? ?
PRD_900023 "O1'" O6 O 0 1 N N N -25.563 16.173 -5.020 -4.317 -0.553 1.292 GLC 1 O1 polymer 1 1 7 ? ? ?
PRD_900023 "O2'" O7 O 0 1 N N N -27.320 15.774 -7.172 -3.062 -2.928 0.490 GLC 1 O2 polymer 1 1 8 ? ? ?
PRD_900023 "O3'" O8 O 0 1 N N N -26.857 13.076 -7.488 -0.421 -1.843 0.308 GLC 1 O3 polymer 1 1 9 ? ? ?
PRD_900023 "O4'" O9 O 0 1 N N N -24.697 12.012 -5.772 -0.260 1.010 0.428 GLC 1 O4 polymer 1 1 10 ? ? ?
PRD_900023 "O5'" O10 O 0 1 N N N -23.696 15.438 -6.330 -3.701 0.474 -0.711 GLC 1 O5 polymer 1 1 11 ? ? ?
PRD_900023 "O6'" O11 O 0 1 N N N -21.781 13.338 -7.180 -3.541 3.344 -0.651 GLC 1 O6 polymer 1 1 12 ? ? ?
PRD_900023 C2 C2 C 0 1 N N R -24.339 9.684 -5.468 2.084 1.591 0.554 BGC 2 C2 polymer 1 1 13 ? ? ?
PRD_900023 C3 C3 C 0 1 N N S -24.167 8.360 -6.155 3.464 1.234 -0.005 BGC 2 C3 polymer 1 1 14 ? ? ?
PRD_900023 C4 C4 C 0 1 N N S -25.201 8.227 -7.280 3.716 -0.263 0.204 BGC 2 C4 polymer 1 1 15 ? ? ?
PRD_900023 C5 C5 C 0 1 N N R -25.091 9.431 -8.208 2.594 -1.060 -0.466 BGC 2 C5 polymer 1 1 16 ? ? ?
PRD_900023 C6 C6 C 0 1 N N N -26.084 9.364 -9.394 2.806 -2.553 -0.210 BGC 2 C6 polymer 1 1 17 ? ? ?
PRD_900023 C1 C1 C 0 1 N N S -24.317 10.822 -6.464 1.024 0.722 -0.129 BGC 2 C1 polymer 1 1 18 ? ? ?
PRD_900023 O2 O1 O 0 1 N N N -23.320 9.884 -4.466 1.807 2.969 0.299 BGC 2 O2 polymer 1 1 19 ? ? ?
PRD_900023 O3 O2 O 0 1 N N N -24.323 7.315 -5.255 4.467 1.987 0.678 BGC 2 O3 polymer 1 1 20 ? ? ?
PRD_900023 O4 O3 O 0 1 N N N -24.974 6.999 -7.961 4.971 -0.622 -0.378 BGC 2 O4 polymer 1 1 21 ? ? ?
PRD_900023 O5 O4 O 0 1 N N N -25.320 10.629 -7.438 1.335 -0.657 0.079 BGC 2 O5 polymer 1 1 22 ? ? ?
PRD_900023 O6 O5 O 0 1 N N N -27.370 9.472 -8.850 1.826 -3.304 -0.929 BGC 2 O6 polymer 1 1 23 ? ? ?
PRD_900023 "H1'" H12 H 0 1 N N N -24.941 17.031 -6.760 -4.852 -1.237 -0.583 GLC 1 H1 polymer 1 1 24 ? ? ?
PRD_900023 "H2'" H14 H 0 1 N N N -25.557 15.225 -8.211 -2.569 -1.903 -1.236 GLC 1 H2 polymer 1 1 25 ? ? ?
PRD_900023 "H3'" H16 H 0 1 N N N -26.499 13.887 -5.624 -1.775 -0.861 1.524 GLC 1 H3 polymer 1 1 26 ? ? ?
PRD_900023 "H4'" H18 H 0 1 N N N -24.265 13.021 -7.532 -1.093 0.172 -1.268 GLC 1 H4 polymer 1 1 27 ? ? ?
PRD_900023 "H5'" H19 H 0 1 N N N -23.983 14.156 -4.726 -2.833 1.374 0.934 GLC 1 H5 polymer 1 1 28 ? ? ?
PRD_900023 "H6'" H20 H 0 1 N N N -22.179 12.655 -5.245 -1.513 3.003 -0.450 GLC 1 H61 polymer 1 1 29 ? ? ?
PRD_900023 "H6'A" H21 H 0 1 N N N -21.572 14.342 -5.358 -2.265 2.318 -1.911 GLC 1 H62 polymer 1 1 30 ? ? ?
PRD_900023 "HO1'" H13 H 0 1 N N N -24.957 16.669 -4.482 -5.078 0.026 1.432 GLC 1 HO1 polymer 1 1 31 ? ? ?
PRD_900023 "HO2'" H15 H 0 1 N N N -27.330 16.663 -7.507 -3.816 -3.414 0.130 GLC 1 HO2 polymer 1 1 32 ? ? ?
PRD_900023 "HO3'" H17 H 0 1 N N N -26.930 12.192 -7.149 -0.506 -2.718 0.711 GLC 1 HO3 polymer 1 1 33 ? ? ?
PRD_900023 "HO6'" H22 H 0 1 N N N -20.887 13.018 -7.163 -3.477 4.204 -1.088 GLC 1 HO6 polymer 1 1 34 ? ? ?
PRD_900023 H2 H2 H 0 1 N N N -25.323 9.686 -4.976 2.067 1.408 1.629 BGC 2 H2 polymer 1 1 35 ? ? ?
PRD_900023 H3 H4 H 0 1 N N N -23.164 8.326 -6.605 3.497 1.465 -1.070 BGC 2 H3 polymer 1 1 36 ? ? ?
PRD_900023 H4 H6 H 0 1 N N N -26.205 8.224 -6.830 3.733 -0.484 1.271 BGC 2 H4 polymer 1 1 37 ? ? ?
PRD_900023 H5 H8 H 0 1 N N N -24.072 9.454 -8.621 2.603 -0.870 -1.539 BGC 2 H5 polymer 1 1 38 ? ? ?
PRD_900023 H6 H10 H 0 1 N N N -25.897 10.193 -10.092 2.709 -2.757 0.857 BGC 2 H6C1 polymer 1 1 39 ? ? ?
PRD_900023 H6A H9 H 0 1 N N N -25.976 8.407 -9.925 3.802 -2.842 -0.545 BGC 2 H6C2 polymer 1 1 40 ? ? ?
PRD_900023 H1 H1 H 0 1 N N N -23.319 10.917 -6.916 1.013 0.935 -1.198 BGC 2 H1 polymer 1 1 41 ? ? ?
PRD_900023 HO2 H3 H 0 1 N N N -23.341 9.165 -3.845 0.945 3.264 0.623 BGC 2 HB polymer 1 1 42 ? ? ?
PRD_900023 HO3 H5 H 0 1 N N N -23.682 7.398 -4.559 4.365 2.945 0.594 BGC 2 HC polymer 1 1 43 ? ? ?
PRD_900023 HO4 H7 H 0 1 N N N -25.052 6.277 -7.348 5.728 -0.150 -0.003 BGC 2 HD polymer 1 1 44 ? ? ?
PRD_900023 HO6 H11 H 0 1 N N N -28.014 9.435 -9.548 1.900 -4.261 -0.813 BGC 2 H6 polymer 1 1 45 ? ? ?
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PRD_900023 C6 O6 SING N N 1
PRD_900023 C6 C5 SING N N 2
PRD_900023 C5 O5 SING N N 3
PRD_900023 C5 C4 SING N N 4
PRD_900023 O4 C4 SING N N 5
PRD_900023 "O3'" "C3'" SING N N 6
PRD_900023 O5 C1 SING N N 7
PRD_900023 C4 C3 SING N N 8
PRD_900023 "C2'" "O2'" SING N N 9
PRD_900023 "C2'" "C3'" SING N N 10
PRD_900023 "C2'" "C1'" SING N N 11
PRD_900023 "O6'" "C6'" SING N N 12
PRD_900023 "C3'" "C4'" SING N N 13
PRD_900023 "C4'" "C5'" SING N N 14
PRD_900023 "C4'" "O4'" SING N N 15
PRD_900023 C1 "O4'" SING N N 16
PRD_900023 C1 C2 SING N N 17
PRD_900023 "O5'" "C1'" SING N N 18
PRD_900023 "O5'" "C5'" SING N N 19
PRD_900023 "C1'" "O1'" SING N N 20
PRD_900023 C3 C2 SING N N 21
PRD_900023 C3 O3 SING N N 22
PRD_900023 "C6'" "C5'" SING N N 23
PRD_900023 C2 O2 SING N N 24
PRD_900023 C1 H1 SING N N 25
PRD_900023 C2 H2 SING N N 26
PRD_900023 O2 HO2 SING N N 27
PRD_900023 C3 H3 SING N N 28
PRD_900023 O3 HO3 SING N N 29
PRD_900023 C4 H4 SING N N 30
PRD_900023 O4 HO4 SING N N 31
PRD_900023 C5 H5 SING N N 32
PRD_900023 C6 H6A SING N N 33
PRD_900023 C6 H6 SING N N 34
PRD_900023 O6 HO6 SING N N 35
PRD_900023 "C1'" "H1'" SING N N 36
PRD_900023 "O1'" "HO1'" SING N N 37
PRD_900023 "C2'" "H2'" SING N N 38
PRD_900023 "O2'" "HO2'" SING N N 39
PRD_900023 "C3'" "H3'" SING N N 40
PRD_900023 "O3'" "HO3'" SING N N 41
PRD_900023 "C4'" "H4'" SING N N 42
PRD_900023 "C5'" "H5'" SING N N 43
PRD_900023 "C6'" "H6'" SING N N 44
PRD_900023 "C6'" "H6'A" SING N N 45
PRD_900023 "O6'" "HO6'" SING N N 46
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PRD_900023 SMILES ACDLabs 12.01 "C2(OC1C(C(C(O)OC1CO)O)O)C(O)C(O)C(O)C(O2)CO"
PRD_900023 InChI InChI 1.03
;InChI=1S/C12H22O11/c13-1-3-5(15)6(16)9(19)12(22-3)23-10-4(2-14)21-11(20)8(18)7(10)17/h3-20H,1-2H2/t3-,4-,5-,6+,7-,8-,9-
,10-,11+,12+/m1/s1
;
PRD_900023 InChIKey InChI 1.03 GUBGYTABKSRVRQ-MFRLZQSSSA-N
PRD_900023 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O"
PRD_900023 SMILES CACTVS 3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO)[CH](O)[CH](O)[CH]1O"
PRD_900023 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)O)O)CO)O)O)O)O"
PRD_900023 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)O)O)CO)O)O)O)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PRD_900023 "SYSTEMATIC NAME" ACDLabs 12.01 4-O-beta-D-glucopyranosyl-alpha-D-glucopyranose
PRD_900023 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7
;(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{S},4~{R},5~{R},6~{S})-2-(hydroxymethyl)-4,5,6-tris(oxida
nyl)oxan-3-yl]oxy-oxane-3,4,5-triol
;
#