data_PRDCC_900058 # _chem_comp.id PRD_900058 _chem_comp.name ;(4S,5R,6R)-6-((2R,3R,4R,5R,6R)-3-ACETAMIDO-2,5-DIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-4-YLOXY)-4,5-DIHYDROXY-5 ,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID ; _chem_comp.type saccharide _chem_comp.formula "C14 H21 N O11" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 379.317 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900058 C1 C1 C 0 1 N N R 18.085 -77.934 185.049 3.101 -0.486 0.599 C1 NGA 1 1 1 polymer 1 ? ? ? PRD_900058 C2 C2 C 0 1 N N R 17.511 -79.213 185.664 2.176 0.562 -0.025 C2 NGA 2 1 1 polymer 1 ? ? ? PRD_900058 C3 C3 C 0 1 N N R 15.982 -79.188 185.627 0.731 0.057 0.037 C3 NGA 3 1 1 polymer 1 ? ? ? PRD_900058 C4 C4 C 0 1 N N R 15.472 -77.896 186.271 0.670 -1.334 -0.605 C4 NGA 4 1 1 polymer 1 ? ? ? PRD_900058 C5 C5 C 0 1 N N R 16.141 -76.682 185.619 1.708 -2.239 0.063 C5 NGA 5 1 1 polymer 1 ? ? ? PRD_900058 C6 C6 C 0 1 N N N 15.686 -75.394 186.309 1.632 -3.638 -0.552 C6 NGA 6 1 1 polymer 1 ? ? ? PRD_900058 CAP CAP C 0 1 N N N 18.558 -81.432 185.528 3.266 2.696 0.418 C7 NGA 7 1 1 polymer 1 ? ? ? PRD_900058 CAA CAA C 0 1 N N N 18.992 -82.561 184.591 3.381 3.989 1.183 C8 NGA 8 1 1 polymer 1 ? ? ? PRD_900058 N2 N2 N 0 1 N N N 17.996 -80.389 184.925 2.288 1.819 0.719 N2 NGA 9 1 1 polymer 1 ? ? ? PRD_900058 O1 O1 O 0 1 N N N 19.510 -77.957 185.164 4.447 -0.009 0.570 O1 NGA 10 1 1 polymer 1 ? ? ? PRD_900058 O3 O3 O 0 1 N N N 15.510 -80.345 186.335 -0.128 0.951 -0.674 O3 NGA 11 1 1 polymer 1 ? ? ? PRD_900058 O4 O4 O 0 1 N N N 15.764 -77.910 187.671 0.955 -1.229 -2.001 O4 NGA 12 1 1 polymer 1 ? ? ? PRD_900058 O5 O5 O 0 1 N N N 17.567 -76.793 185.753 3.015 -1.704 -0.138 O5 NGA 13 1 1 polymer 1 ? ? ? PRD_900058 O6 O6 O 0 1 N N N 16.398 -74.284 185.756 2.512 -4.517 0.152 O6 NGA 14 1 1 polymer 1 ? ? ? PRD_900058 OAB OAB O 0 1 N N N 18.742 -81.514 186.743 4.053 2.445 -0.470 O7 NGA 15 1 1 polymer 1 ? ? ? PRD_900058 CAX CAX C 0 1 N N R 14.306 -80.880 185.764 -1.412 0.872 -0.052 C1 GCD 16 2 1 polymer 1 ? ? ? PRD_900058 CAU CAU C 0 1 N N R 14.046 -82.258 186.376 -2.354 1.902 -0.691 C2 GCD 17 2 1 polymer 1 ? ? ? PRD_900058 CAS CAS C 0 1 N N S 12.809 -82.886 185.731 -3.640 1.929 0.147 C3 GCD 18 2 1 polymer 1 ? ? ? PRD_900058 CAJ CAJ C 0 1 N N N 11.698 -81.838 185.620 -4.012 0.508 0.484 C4 GCD 19 2 1 polymer 1 ? ? ? PRD_900058 CAR CAR C 0 1 N N N 11.963 -80.485 185.807 -3.186 -0.502 0.287 C5 GCD 20 2 1 polymer 1 ? ? ? PRD_900058 CAQ CAQ C 0 1 N N N 10.810 -79.482 185.718 -3.668 -1.839 0.677 C6 GCD 21 2 1 polymer 1 ? ? ? PRD_900058 OAH OAH O 0 1 N N N 15.173 -83.119 186.201 -1.743 3.193 -0.686 O2 GCD 22 2 1 polymer 1 ? ? ? PRD_900058 OAF OAF O 0 1 N N N 12.357 -83.984 186.527 -4.693 2.539 -0.602 O3 GCD 23 2 1 polymer 1 ? ? ? PRD_900058 OAM OAM O 0 1 N N N 13.208 -80.016 186.107 -1.949 -0.433 -0.234 O5 GCD 24 2 1 polymer 1 ? ? ? PRD_900058 OAC OAC O 0 1 N N N 9.643 -79.928 185.704 -4.778 -1.969 1.155 O6A GCD 25 2 1 polymer 1 ? ? ? PRD_900058 OAE OAE O 0 1 N N N 11.103 -78.268 185.668 -2.878 -2.917 0.504 O6B GCD 26 2 1 polymer 1 ? ? ? PRD_900058 H1 H1 H 0 1 N N N 17.800 -77.871 183.988 2.801 -0.665 1.631 H1 NGA 27 1 1 polymer 1 ? ? ? PRD_900058 H2 H2 H 0 1 N N N 17.844 -79.272 186.711 2.461 0.728 -1.064 H2 NGA 28 1 1 polymer 1 ? ? ? PRD_900058 H3 H3 H 0 1 N N N 15.609 -79.212 184.592 0.412 -0.007 1.077 H3 NGA 29 1 1 polymer 1 ? ? ? PRD_900058 H4 H4 H 0 1 N N N 14.384 -77.828 186.123 -0.325 -1.757 -0.466 H4 NGA 30 1 1 polymer 1 ? ? ? PRD_900058 H5 H5 H 0 1 N N N 15.858 -76.651 184.557 1.502 -2.301 1.131 H5 NGA 31 1 1 polymer 1 ? ? ? PRD_900058 H61 1H6 H 0 1 N N N 15.891 -75.462 187.388 0.611 -4.012 -0.478 H61 NGA 32 1 1 polymer 1 ? ? ? PRD_900058 H62 2H6 H 0 1 N N N 14.606 -75.254 186.151 1.927 -3.592 -1.600 H62 NGA 33 1 1 polymer 1 ? ? ? PRD_900058 HAA1 1HAA H 0 0 N N N 18.234 -83.359 184.603 4.224 4.564 0.801 H81 NGA 34 1 1 polymer 1 ? ? ? PRD_900058 HAA2 2HAA H 0 0 N N N 19.957 -82.967 184.928 2.464 4.566 1.063 H82 NGA 35 1 1 polymer 1 ? ? ? PRD_900058 HAA3 3HAA H 0 0 N N N 19.096 -82.170 183.568 3.538 3.773 2.240 H83 NGA 36 1 1 polymer 1 ? ? ? PRD_900058 HN2 HN2 H 0 1 N N N 17.899 -80.404 183.930 1.658 2.020 1.429 HN2 NGA 37 1 1 polymer 1 ? ? ? PRD_900058 HO1 HO1 H 0 1 N N N 19.898 -77.962 184.297 4.996 -0.696 0.971 HO1 NGA 38 1 1 polymer 1 ? ? ? PRD_900058 HO4 HO4 H 0 1 N N N 16.705 -77.913 187.799 0.912 -2.125 -2.363 HO4 NGA 39 1 1 polymer 1 ? ? ? PRD_900058 HO6 HO6 H 0 1 N N N 16.556 -73.639 186.435 2.434 -5.385 -0.266 HO6 NGA 40 1 1 polymer 1 ? ? ? PRD_900058 HAX HAX H 0 1 N N N 14.406 -80.956 184.671 -1.314 1.081 1.013 H1 GCD 41 2 1 polymer 1 ? ? ? PRD_900058 HAU HAU H 0 1 N N N 13.875 -82.130 187.455 -2.585 1.605 -1.714 H2 GCD 42 2 1 polymer 1 ? ? ? PRD_900058 HAS HAS H 0 1 N N N 13.068 -83.249 184.725 -3.468 2.492 1.065 H3 GCD 43 2 1 polymer 1 ? ? ? PRD_900058 HAH HAH H 0 1 N N N 15.286 -83.310 185.277 -2.385 3.808 -1.068 HO2 GCD 44 2 1 polymer 1 ? ? ? PRD_900058 HAF HAF H 0 1 N N N 12.257 -84.753 185.979 -5.483 2.516 -0.044 HO3 GCD 45 2 1 polymer 1 ? ? ? PRD_900058 HAE HAE H 0 1 N N N 10.307 -77.751 185.619 -3.195 -3.794 0.760 HOB GCD 46 2 1 polymer 1 ? ? ? PRD_900058 HAJ HAJ H 0 1 N N N 10.691 -82.155 185.393 -4.988 0.310 0.901 H4 GCD 47 2 1 polymer 1 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900058 CAA CAP SING N N 1 PRD_900058 CAA HAA1 SING N N 2 PRD_900058 CAA HAA2 SING N N 3 PRD_900058 CAA HAA3 SING N N 4 PRD_900058 CAP OAB DOUB N N 5 PRD_900058 CAP N2 SING N N 6 PRD_900058 N2 C2 SING N N 7 PRD_900058 N2 HN2 SING N N 8 PRD_900058 C2 C1 SING N N 9 PRD_900058 C2 C3 SING N N 10 PRD_900058 C2 H2 SING N N 11 PRD_900058 C1 O1 SING N N 12 PRD_900058 C1 O5 SING N N 13 PRD_900058 C1 H1 SING N N 14 PRD_900058 O1 HO1 SING N N 15 PRD_900058 O5 C5 SING N N 16 PRD_900058 C5 C6 SING N N 17 PRD_900058 C5 C4 SING N N 18 PRD_900058 C5 H5 SING N N 19 PRD_900058 C6 O6 SING N N 20 PRD_900058 C6 H61 SING N N 21 PRD_900058 C6 H62 SING N N 22 PRD_900058 O6 HO6 SING N N 23 PRD_900058 C4 O4 SING N N 24 PRD_900058 C4 C3 SING N N 25 PRD_900058 C4 H4 SING N N 26 PRD_900058 O4 HO4 SING N N 27 PRD_900058 C3 O3 SING N N 28 PRD_900058 C3 H3 SING N N 29 PRD_900058 O3 CAX SING N N 30 PRD_900058 CAX OAM SING N N 31 PRD_900058 CAX CAU SING N N 32 PRD_900058 CAX HAX SING N N 33 PRD_900058 OAM CAR SING N N 34 PRD_900058 CAR CAQ SING N N 35 PRD_900058 CAR CAJ DOUB N N 36 PRD_900058 CAQ OAE SING N N 37 PRD_900058 CAQ OAC DOUB N N 38 PRD_900058 OAE HAE SING N N 39 PRD_900058 CAJ CAS SING N N 40 PRD_900058 CAJ HAJ SING N N 41 PRD_900058 CAS OAF SING N N 42 PRD_900058 CAS CAU SING N N 43 PRD_900058 CAS HAS SING N N 44 PRD_900058 OAF HAF SING N N 45 PRD_900058 CAU OAH SING N N 46 PRD_900058 CAU HAU SING N N 47 PRD_900058 OAH HAH SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900058 SMILES ACDLabs 10.04 "O=C(O)C=2OC(OC1C(O)C(OC(O)C1NC(=O)C)CO)C(O)C(O)C=2" PRD_900058 SMILES_CANONICAL CACTVS 3.341 "CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@H](O)[C@@H]1O[C@@H]2OC(=C[C@H](O)[C@H]2O)C(O)=O" PRD_900058 SMILES CACTVS 3.341 "CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O[CH]2OC(=C[CH](O)[CH]2O)C(O)=O" PRD_900058 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1O)CO)O)O[C@H]2[C@@H]([C@H](C=C(O2)C(=O)O)O)O" PRD_900058 SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC1C(C(C(OC1O)CO)O)OC2C(C(C=C(O2)C(=O)O)O)O" PRD_900058 InChI InChI 1.03 ;InChI=1S/C14H21NO11/c1-4(17)15-8-11(10(20)7(3-16)24-13(8)23)26-14-9(19)5(18)2-6(25-14)12(21)22/h2,5,7-11,13-14,16,18-20 ,23H,3H2,1H3,(H,15,17)(H,21,22)/t5-,7+,8+,9+,10-,11+,13+,14-/m0/s1 ; PRD_900058 InChIKey InChI 1.03 DLGJWSVWTWEWBJ-MUODBDBBSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900058 "SYSTEMATIC NAME" ACDLabs 10.04 "2-(acetylamino)-2-deoxy-3-O-(4-deoxy-alpha-L-threo-hex-4-enopyranuronosyl)-beta-D-galactopyranose" PRD_900058 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 ;(4S,5R,6R)-6-[(2R,3R,4R,5R,6R)-3-acetamido-2,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-4,5-dihydroxy-5,6-dihydro-4H-py ran-2-carboxylic acid ; #