data_PRDCC_900064 # _chem_comp.id PRD_900064 _chem_comp.name 2-FLUORO-2-DEOXY-LACTOSE _chem_comp.type saccharide _chem_comp.formula "C12 H21 F O10" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 344.288 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900064 "C2'" C8 C 0 1 N N R 20.952 145.046 1.511 2.804 -1.512 -0.087 BGC 1 C2 polymer 1 1 1 ? ? ? PRD_900064 "C3'" C9 C 0 1 N N R 20.643 145.593 2.920 1.498 -0.908 -0.613 BGC 1 C3 polymer 1 1 2 ? ? ? PRD_900064 "C4'" C10 C 0 1 N N S 20.801 144.495 3.981 1.248 0.430 0.090 BGC 1 C4 polymer 1 1 3 ? ? ? PRD_900064 "C5'" C11 C 0 1 N N R 22.101 143.713 3.820 2.448 1.351 -0.141 BGC 1 C5 polymer 1 1 4 ? ? ? PRD_900064 "C6'" C12 C 0 1 N N N 22.133 142.477 4.655 2.233 2.668 0.608 BGC 1 C6 polymer 1 1 5 ? ? ? PRD_900064 "C1'" C7 C 0 1 N N R 22.287 144.308 1.517 3.945 -0.516 -0.311 BGC 1 C1 polymer 1 1 6 ? ? ? PRD_900064 "O1'" O6 O 0 1 N N N 22.464 143.727 0.272 5.156 -1.049 0.228 BGC 1 O1 polymer 1 1 7 ? ? ? PRD_900064 "O2'" O7 O 0 1 N N N 20.934 146.119 0.600 3.085 -2.725 -0.788 BGC 1 O2 polymer 1 1 8 ? ? ? PRD_900064 "O3'" O8 O 0 1 N N N 19.347 146.139 2.923 0.416 -1.800 -0.342 BGC 1 O3 polymer 1 1 9 ? ? ? PRD_900064 O1 O1 O 0 1 N N N 20.802 145.149 5.288 0.070 1.037 -0.445 BGC 1 O4 polymer 1 1 10 ? ? ? PRD_900064 "O5'" O9 O 0 1 N N N 22.248 143.251 2.472 3.634 0.717 0.343 BGC 1 O5 polymer 1 1 11 ? ? ? PRD_900064 "O6'" O10 O 0 1 N N N 23.111 142.596 5.672 3.296 3.571 0.299 BGC 1 O6 polymer 1 1 12 ? ? ? PRD_900064 C1 C1 C 0 1 N N S 19.560 145.325 5.932 -1.132 0.676 0.238 2FG 2 C1 polymer 1 1 13 ? ? ? PRD_900064 C2 C2 C 0 1 N N R 19.875 145.580 7.378 -2.305 1.475 -0.335 2FG 2 C2 polymer 1 1 14 ? ? ? PRD_900064 F2 F1 F 0 1 N N N 20.550 144.451 7.843 -2.093 2.840 -0.115 2FG 2 F2 polymer 1 1 15 ? ? ? PRD_900064 C3 C3 C 0 1 N N S 18.672 145.961 8.232 -3.598 1.039 0.361 2FG 2 C3 polymer 1 1 16 ? ? ? PRD_900064 O3 O2 O 0 1 N N N 19.061 146.179 9.602 -4.708 1.727 -0.219 2FG 2 O3 polymer 1 1 17 ? ? ? PRD_900064 C4 C4 C 0 1 N N R 18.102 147.210 7.593 -3.779 -0.471 0.178 2FG 2 C4 polymer 1 1 18 ? ? ? PRD_900064 O4 O3 O 0 1 N N N 19.078 148.256 7.691 -3.924 -0.770 -1.212 2FG 2 O4 polymer 1 1 19 ? ? ? PRD_900064 C5 C5 C 0 1 N N R 17.769 146.894 6.114 -2.549 -1.195 0.731 2FG 2 C5 polymer 1 1 20 ? ? ? PRD_900064 O5 O4 O 0 1 N N N 18.933 146.449 5.371 -1.378 -0.721 0.063 2FG 2 O5 polymer 1 1 21 ? ? ? PRD_900064 C6 C6 C 0 1 N N N 17.168 148.075 5.415 -2.695 -2.700 0.498 2FG 2 C6 polymer 1 1 22 ? ? ? PRD_900064 O6 O5 O 0 1 N N N 15.830 148.267 5.824 -1.605 -3.386 1.117 2FG 2 O6 polymer 1 1 23 ? ? ? PRD_900064 "H2'" H12 H 0 1 N N N 20.164 144.325 1.249 2.706 -1.720 0.978 BGC 1 H2 polymer 1 1 24 ? ? ? PRD_900064 "H3'" H13 H 0 1 N N N 21.376 146.383 3.141 1.578 -0.747 -1.688 BGC 1 H3 polymer 1 1 25 ? ? ? PRD_900064 "H4'" H14 H 0 1 N N N 19.951 143.801 3.908 1.117 0.261 1.159 BGC 1 H4 polymer 1 1 26 ? ? ? PRD_900064 "H5'" H15 H 0 1 N N N 22.945 144.362 4.095 2.553 1.552 -1.207 BGC 1 H5 polymer 1 1 27 ? ? ? PRD_900064 "H6'1" H16 H 0 1 N N N 21.146 142.325 5.117 1.283 3.107 0.303 BGC 1 H6C1 polymer 1 1 28 ? ? ? PRD_900064 "H6'2" H17 H 0 1 N N N 22.376 141.614 4.017 2.218 2.477 1.681 BGC 1 H6C2 polymer 1 1 29 ? ? ? PRD_900064 "H1'" H11 H 0 1 N N N 23.096 145.016 1.750 4.069 -0.339 -1.380 BGC 1 H1 polymer 1 1 30 ? ? ? PRD_900064 "HO1'" H18 H 0 1 N N N 23.292 143.261 0.254 5.922 -0.469 0.122 BGC 1 HA polymer 1 1 31 ? ? ? PRD_900064 "HO2'" H19 H 0 1 N N N 20.086 146.547 0.631 3.903 -3.160 -0.509 BGC 1 HB polymer 1 1 32 ? ? ? PRD_900064 "HO3'" H20 H 0 1 N N N 19.148 146.479 3.788 0.512 -2.671 -0.751 BGC 1 HC polymer 1 1 33 ? ? ? PRD_900064 "HO6'" H21 H 0 1 N N N 23.122 141.804 6.196 3.224 4.429 0.740 BGC 1 H6 polymer 1 1 34 ? ? ? PRD_900064 H1 H1 H 0 1 N N N 18.931 144.427 5.838 -1.026 0.896 1.300 2FG 2 H1 polymer 1 1 35 ? ? ? PRD_900064 H2 H2 H 0 1 N N N 20.568 146.434 7.409 -2.385 1.287 -1.406 2FG 2 H2 polymer 1 1 36 ? ? ? PRD_900064 H3 H3 H 0 1 N N N 17.925 145.156 8.175 -3.538 1.274 1.423 2FG 2 H3 polymer 1 1 37 ? ? ? PRD_900064 HO3 H8 H 0 1 N N N 18.297 146.415 10.115 -4.656 2.690 -0.146 2FG 2 HO3 polymer 1 1 38 ? ? ? PRD_900064 H4 H4 H 0 1 N N N 17.176 147.497 8.114 -4.668 -0.799 0.716 2FG 2 H4 polymer 1 1 39 ? ? ? PRD_900064 HO4 H9 H 0 1 N N N 19.265 148.431 8.606 -4.682 -0.340 -1.630 2FG 2 HO4 polymer 1 1 40 ? ? ? PRD_900064 H5 H5 H 0 1 N N N 17.024 146.085 6.112 -2.462 -0.999 1.800 2FG 2 H5 polymer 1 1 41 ? ? ? PRD_900064 H61 H6 H 0 1 N N N 17.193 147.903 4.329 -3.634 -3.046 0.932 2FG 2 H6 polymer 1 1 42 ? ? ? PRD_900064 H62 H7 H 0 1 N N N 17.753 148.975 5.657 -2.692 -2.904 -0.572 2FG 2 H6A polymer 1 1 43 ? ? ? PRD_900064 HO6 H10 H 0 1 N N N 15.465 149.019 5.372 -1.632 -4.347 1.009 2FG 2 HO6 polymer 1 1 44 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900064 "O1'" "C1'" SING N N 1 PRD_900064 "O2'" "C2'" SING N N 2 PRD_900064 "C2'" "C1'" SING N N 3 PRD_900064 "C2'" "C3'" SING N N 4 PRD_900064 "C1'" "O5'" SING N N 5 PRD_900064 "O5'" "C5'" SING N N 6 PRD_900064 "C3'" "O3'" SING N N 7 PRD_900064 "C3'" "C4'" SING N N 8 PRD_900064 "C5'" "C4'" SING N N 9 PRD_900064 "C5'" "C6'" SING N N 10 PRD_900064 "C4'" O1 SING N N 11 PRD_900064 "C6'" "O6'" SING N N 12 PRD_900064 O1 C1 SING N N 13 PRD_900064 O5 C1 SING N N 14 PRD_900064 O5 C5 SING N N 15 PRD_900064 C6 O6 SING N N 16 PRD_900064 C6 C5 SING N N 17 PRD_900064 C1 C2 SING N N 18 PRD_900064 C5 C4 SING N N 19 PRD_900064 C2 F2 SING N N 20 PRD_900064 C2 C3 SING N N 21 PRD_900064 C4 O4 SING N N 22 PRD_900064 C4 C3 SING N N 23 PRD_900064 C3 O3 SING N N 24 PRD_900064 C1 H1 SING N N 25 PRD_900064 C2 H2 SING N N 26 PRD_900064 C3 H3 SING N N 27 PRD_900064 C4 H4 SING N N 28 PRD_900064 C5 H5 SING N N 29 PRD_900064 C6 H61 SING N N 30 PRD_900064 C6 H62 SING N N 31 PRD_900064 O3 HO3 SING N N 32 PRD_900064 O4 HO4 SING N N 33 PRD_900064 O6 HO6 SING N N 34 PRD_900064 "C1'" "H1'" SING N N 35 PRD_900064 "C2'" "H2'" SING N N 36 PRD_900064 "C3'" "H3'" SING N N 37 PRD_900064 "C4'" "H4'" SING N N 38 PRD_900064 "C5'" "H5'" SING N N 39 PRD_900064 "C6'" "H6'1" SING N N 40 PRD_900064 "C6'" "H6'2" SING N N 41 PRD_900064 "O1'" "HO1'" SING N N 42 PRD_900064 "O2'" "HO2'" SING N N 43 PRD_900064 "O3'" "HO3'" SING N N 44 PRD_900064 "O6'" "HO6'" SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900064 SMILES ACDLabs 12.01 "C1(C(F)C(O)C(O)C(CO)O1)OC2C(C(C(OC2CO)O)O)O" PRD_900064 InChI InChI 1.03 ;InChI=1S/C12H21FO10/c13-5-7(17)6(16)3(1-14)22-12(5)23-10-4(2-15)21-11(20)9(19)8(10)18/h3-12,14-20H,1-2H2/t3-,4-,5-,6+,7 -,8-,9-,10-,11-,12+/m1/s1 ; PRD_900064 InChIKey InChI 1.03 KWMZPXRIEZDXAQ-QRZGKKJRSA-N PRD_900064 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO)[C@H](F)[C@@H](O)[C@H]1O" PRD_900064 SMILES CACTVS 3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO)[CH](F)[CH](O)[CH]1O" PRD_900064 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O)O)CO)F)O)O)O" PRD_900064 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)O)O)CO)F)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900064 "SYSTEMATIC NAME" ACDLabs 12.01 "4-O-(2-deoxy-2-fluoro-beta-D-galactopyranosyl)-beta-D-glucopyranose" PRD_900064 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;(2~{R},3~{R},4~{R},5~{S},6~{R})-5-[(2~{S},3~{R},4~{S},5~{R},6~{R})-3-fluoranyl-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan- 2-yl]oxy-6-(hydroxymethyl)oxane-2,3,4-triol ; #