data_PRDCC_900074 # _chem_comp.id PRD_900074 _chem_comp.name 4-DEOXYLACTOSE _chem_comp.type saccharide _chem_comp.formula "C12 H22 O10" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 326.297 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900074 "C2'" "C2'" C 0 1 N N R 22.233 58.735 66.003 1.178 0.315 3.024 C2 BGC 1 1 1 polymer 1 ? ? ? PRD_900074 "C3'" "C3'" C 0 1 N N R 22.701 57.339 65.546 0.830 1.065 1.733 C3 BGC 2 1 1 polymer 1 ? ? ? PRD_900074 "C4'" "C4'" C 0 1 N N S 21.502 56.404 65.722 -0.190 0.238 0.945 C4 BGC 3 1 1 polymer 1 ? ? ? PRD_900074 "C5'" "C5'" C 0 1 N N R 20.260 56.819 64.873 -1.380 -0.084 1.851 C5 BGC 4 1 1 polymer 1 ? ? ? PRD_900074 "C6'" "C6'" C 0 1 N N N 19.026 55.915 65.060 -2.419 -0.884 1.063 C6 BGC 5 1 1 polymer 1 ? ? ? PRD_900074 "C1'" "C1'" C 0 1 N N R 21.022 59.167 65.115 -0.114 -0.011 3.774 C1 BGC 6 1 1 polymer 1 ? ? ? PRD_900074 "O1'" "O1'" O 0 1 N Y N 20.587 60.439 65.536 0.201 -0.685 4.994 O1 BGC 7 1 1 polymer 1 ? ? ? PRD_900074 "O2'" "O2'" O 0 1 N N N 23.291 59.666 65.850 2.014 1.134 3.843 O2 BGC 8 1 1 polymer 1 ? ? ? PRD_900074 "O3'" "O3'" O 0 1 N N N 23.817 56.939 66.379 2.010 1.247 0.948 O3 BGC 9 1 1 polymer 1 ? ? ? PRD_900074 O1 O1 O 0 1 N N N 21.781 55.096 65.145 -0.640 0.986 -0.186 O4 BGC 10 1 1 polymer 1 ? ? ? PRD_900074 "O5'" "O5'" O 0 1 N N N 19.938 58.186 65.255 -0.940 -0.851 2.970 O5 BGC 11 1 1 polymer 1 ? ? ? PRD_900074 "O6'" "O6'" O 0 1 N N N 18.115 56.108 63.988 -3.534 -1.178 1.907 O6 BGC 12 1 1 polymer 1 ? ? ? PRD_900074 C1 C1 C 0 1 N N S 22.025 53.821 65.773 -0.376 0.187 -1.341 C1 Z9D 13 2 1 polymer 1 ? ? ? PRD_900074 C2 C2 C 0 1 N N R 22.285 52.460 65.211 -1.079 0.799 -2.554 C2 Z9D 14 2 1 polymer 1 ? ? ? PRD_900074 C3 C3 C 0 1 N N S 22.302 51.487 66.383 -0.817 -0.081 -3.781 C3 Z9D 15 2 1 polymer 1 ? ? ? PRD_900074 C4 C4 C 0 1 N N N 23.469 51.896 67.335 0.696 -0.273 -3.932 C4 Z9D 16 2 1 polymer 1 ? ? ? PRD_900074 C5 C5 C 0 1 N N S 23.349 53.194 67.910 1.265 -0.803 -2.614 C5 Z9D 17 2 1 polymer 1 ? ? ? PRD_900074 C6 C6 C 0 1 N N N 24.315 53.629 68.705 2.770 -1.030 -2.765 C6 Z9D 18 2 1 polymer 1 ? ? ? PRD_900074 O2 O2 O 0 1 N N N 21.240 52.137 64.311 -2.485 0.870 -2.309 O2 Z9D 19 2 1 polymer 1 ? ? ? PRD_900074 O3 O3 O 0 1 N N N 22.547 50.210 65.851 -1.339 0.551 -4.951 O3 Z9D 20 2 1 polymer 1 ? ? ? PRD_900074 O5 O5 O 0 1 N N N 23.097 54.158 66.749 1.030 0.141 -1.572 O5 Z9D 21 2 1 polymer 1 ? ? ? PRD_900074 O6 O6 O 0 1 N N N 24.696 52.835 69.870 3.303 -1.529 -1.536 O6 Z9D 22 2 1 polymer 1 ? ? ? PRD_900074 "H2'" "H2'" H 0 1 N N N 21.929 58.704 67.075 1.701 -0.609 2.779 H2 BGC 23 1 1 polymer 1 ? ? ? PRD_900074 "H3'" "H3'" H 0 1 N N N 23.041 57.319 64.484 0.402 2.037 1.980 H3 BGC 24 1 1 polymer 1 ? ? ? PRD_900074 "H4'" "H4'" H 0 1 N N N 21.315 56.426 66.821 0.273 -0.688 0.608 H4 BGC 25 1 1 polymer 1 ? ? ? PRD_900074 "H5'" "H5'" H 0 1 N N N 20.523 56.718 63.794 -1.828 0.844 2.202 H5 BGC 26 1 1 polymer 1 ? ? ? PRD_900074 "H6'1" "1H6'" H 0 0 N N N 19.307 54.843 65.180 -2.756 -0.299 0.207 H6C1 BGC 27 1 1 polymer 1 ? ? ? PRD_900074 "H6'2" "2H6'" H 0 0 N N N 18.541 56.069 66.052 -1.973 -1.815 0.713 H6C2 BGC 28 1 1 polymer 1 ? ? ? PRD_900074 "H1'" "H1'" H 0 1 N N N 21.324 59.213 64.042 -0.647 0.912 3.998 H1 BGC 29 1 1 polymer 1 ? ? ? PRD_900074 "HO1'" "'HO1" H 0 0 N N N 19.850 60.701 64.996 -0.638 -0.873 5.435 HA BGC 30 1 1 polymer 1 ? ? ? PRD_900074 "HO2'" "'HO2" H 0 0 N N N 24.027 59.403 66.389 2.208 0.625 4.642 HB BGC 31 1 1 polymer 1 ? ? ? PRD_900074 "HO3'" "'HO3" H 0 0 N N N 24.105 56.078 66.097 2.623 1.771 1.481 HC BGC 32 1 1 polymer 1 ? ? ? PRD_900074 "HO6'" "'HO6" H 0 0 N N N 17.354 55.550 64.103 -4.164 -1.682 1.373 H6 BGC 33 1 1 polymer 1 ? ? ? PRD_900074 H1 H1 H 0 1 N N N 20.972 53.530 65.998 -0.750 -0.822 -1.176 H1 Z9D 34 2 1 polymer 1 ? ? ? PRD_900074 H2 H2 H 0 1 N N N 23.254 52.413 64.662 -0.690 1.801 -2.735 H2 Z9D 35 2 1 polymer 1 ? ? ? PRD_900074 H3 H3 H 0 1 N N N 21.341 51.495 66.950 -1.296 -1.050 -3.645 H3 Z9D 36 2 1 polymer 1 ? ? ? PRD_900074 HC41 1HC4 H 0 0 N N N 23.599 51.130 68.135 1.162 0.682 -4.172 H41 Z9D 37 2 1 polymer 1 ? ? ? PRD_900074 HC42 2HC4 H 0 0 N N N 24.447 51.796 66.809 0.895 -0.988 -4.730 H42 Z9D 38 2 1 polymer 1 ? ? ? PRD_900074 H5 H5 H 0 1 N N N 22.507 53.132 68.639 0.780 -1.747 -2.364 H5 Z9D 39 2 1 polymer 1 ? ? ? PRD_900074 H61 1H6 H 0 1 N N N 25.225 53.818 68.089 3.257 -0.088 -3.016 H61 Z9D 40 2 1 polymer 1 ? ? ? PRD_900074 H62 2H6 H 0 1 N N N 24.060 54.660 69.044 2.951 -1.755 -3.560 H62 Z9D 41 2 1 polymer 1 ? ? ? PRD_900074 HO2 HO2 H 0 1 N N N 21.405 51.272 63.953 -2.888 1.255 -3.099 HO2 Z9D 42 2 1 polymer 1 ? ? ? PRD_900074 HO3 HO3 H 0 1 N N N 22.557 49.603 66.581 -1.140 -0.031 -5.696 HO3 Z9D 43 2 1 polymer 1 ? ? ? PRD_900074 HO6 HO6 H 0 1 N N N 25.388 53.147 70.440 4.251 -1.658 -1.674 HO6 Z9D 44 2 1 polymer 1 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900074 C1 C2 SING N N 1 PRD_900074 C1 O1 SING N N 2 PRD_900074 C1 O5 SING N N 3 PRD_900074 C1 H1 SING N N 4 PRD_900074 C2 C3 SING N N 5 PRD_900074 C2 O2 SING N N 6 PRD_900074 C2 H2 SING N N 7 PRD_900074 C3 C4 SING N N 8 PRD_900074 C3 O3 SING N N 9 PRD_900074 C3 H3 SING N N 10 PRD_900074 C4 C5 SING N N 11 PRD_900074 C4 HC41 SING N N 12 PRD_900074 C4 HC42 SING N N 13 PRD_900074 C5 C6 SING N N 14 PRD_900074 C5 O5 SING N N 15 PRD_900074 C5 H5 SING N N 16 PRD_900074 C6 O6 SING N N 17 PRD_900074 C6 H61 SING N N 18 PRD_900074 C6 H62 SING N N 19 PRD_900074 O1 "C4'" SING N N 20 PRD_900074 O2 HO2 SING N N 21 PRD_900074 O3 HO3 SING N N 22 PRD_900074 O6 HO6 SING N N 23 PRD_900074 "C1'" "C2'" SING N N 24 PRD_900074 "C1'" "O1'" SING N N 25 PRD_900074 "C1'" "O5'" SING N N 26 PRD_900074 "C1'" "H1'" SING N N 27 PRD_900074 "C2'" "C3'" SING N N 28 PRD_900074 "C2'" "O2'" SING N N 29 PRD_900074 "C2'" "H2'" SING N N 30 PRD_900074 "C3'" "C4'" SING N N 31 PRD_900074 "C3'" "O3'" SING N N 32 PRD_900074 "C3'" "H3'" SING N N 33 PRD_900074 "C4'" "C5'" SING N N 34 PRD_900074 "C4'" "H4'" SING N N 35 PRD_900074 "C5'" "C6'" SING N N 36 PRD_900074 "C5'" "O5'" SING N N 37 PRD_900074 "C5'" "H5'" SING N N 38 PRD_900074 "C6'" "O6'" SING N N 39 PRD_900074 "C6'" "H6'1" SING N N 40 PRD_900074 "C6'" "H6'2" SING N N 41 PRD_900074 "O1'" "HO1'" SING N N 42 PRD_900074 "O2'" "HO2'" SING N N 43 PRD_900074 "O3'" "HO3'" SING N N 44 PRD_900074 "O6'" "HO6'" SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900074 SMILES ACDLabs 10.04 "OC2C(OC1OC(CO)CC(O)C1O)C(OC(O)C2O)CO" PRD_900074 SMILES_CANONICAL CACTVS 3.341 "OC[C@@H]1C[C@H](O)[C@@H](O)[C@@H](O1)O[C@H]2[C@H](O)[C@@H](O)[C@H](O)O[C@@H]2CO" PRD_900074 SMILES CACTVS 3.341 "OC[CH]1C[CH](O)[CH](O)[CH](O1)O[CH]2[CH](O)[CH](O)[CH](O)O[CH]2CO" PRD_900074 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@H](O[C@H]([C@@H]([C@H]1O)O)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O)O)CO)CO" PRD_900074 SMILES "OpenEye OEToolkits" 1.5.0 "C1C(OC(C(C1O)O)OC2C(OC(C(C2O)O)O)CO)CO" PRD_900074 InChI InChI 1.03 ;InChI=1S/C12H22O10/c13-2-4-1-5(15)7(16)12(20-4)22-10-6(3-14)21-11(19)9(18)8(10)17/h4-19H,1-3H2/t4-,5-,6+,7+,8+,9+,10+,1 1+,12-/m0/s1 ; PRD_900074 InChIKey InChI 1.03 DSYGIMVFFQCOQZ-KYYLAPRMSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900074 "SYSTEMATIC NAME" ACDLabs 10.04 "4-O-(4-deoxy-beta-D-xylo-hexopyranosyl)-beta-D-glucopyranose" PRD_900074 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3R,4R,5S,6R)-5-[(2S,3R,4S,6S)-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-(hydroxymethyl)oxane-2,3,4-triol" #