data_PRDCC_900075 # _chem_comp.id PRD_900075 _chem_comp.name "2-azidoethyl 2-(acetylamino)-4-O-[2-(acetylamino)-2-deoxy-beta-D-galactopyranosyl]-2-deoxy-beta-D-glucopyranoside" _chem_comp.type saccharide _chem_comp.formula "C18 H31 N5 O11" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 493.466 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900075 C1B C4 C 0 1 N N R -7.332 -6.575 52.993 -2.536 -0.398 -0.028 Z3Q 1 C1 polymer 1 1 1 ? ? ? PRD_900075 C12 C1 C 0 1 N N N -7.181 -7.270 55.303 -4.502 -1.312 0.993 Z3Q 1 C11 polymer 1 1 2 ? ? ? PRD_900075 C13 C2 C 0 1 N N N -7.479 -8.512 56.154 -5.843 -0.916 1.615 Z3Q 1 C12 polymer 1 1 3 ? ? ? PRD_900075 C2B C6 C 0 1 N N R -7.566 -7.138 51.587 -1.941 0.912 -0.552 Z3Q 1 C2 polymer 1 1 4 ? ? ? PRD_900075 C7B C16 C 0 1 N N N -6.398 -9.365 51.299 -3.866 2.230 -1.253 Z3Q 1 C21 polymer 1 1 5 ? ? ? PRD_900075 C8B C18 C 0 1 N N N -7.567 -10.102 51.747 -4.761 2.798 -2.325 Z3Q 1 C2M polymer 1 1 6 ? ? ? PRD_900075 C3B C8 C 0 1 N N R -7.658 -5.999 50.547 -0.553 0.634 -1.138 Z3Q 1 C3 polymer 1 1 7 ? ? ? PRD_900075 C4B C10 C 0 1 N N S -8.579 -4.870 50.993 0.324 -0.013 -0.061 Z3Q 1 C4 polymer 1 1 8 ? ? ? PRD_900075 C5B C12 C 0 1 N N R -8.413 -4.508 52.472 -0.359 -1.287 0.444 Z3Q 1 C5 polymer 1 1 9 ? ? ? PRD_900075 C6B C14 C 0 1 N N N -9.577 -3.683 52.980 0.480 -1.907 1.563 Z3Q 1 C6 polymer 1 1 10 ? ? ? PRD_900075 N14 N1 N 0 1 N N N -8.948 -8.575 56.454 -6.696 -0.309 0.590 Z3Q 1 N1A polymer 1 1 11 ? ? ? PRD_900075 N15 N2 N 1 1 N N N -9.221 -7.377 57.426 -7.688 -0.774 0.338 Z3Q 1 N1B polymer 1 1 12 ? ? ? PRD_900075 N16 N3 N -1 1 N N N -9.946 -6.305 58.385 -8.680 -1.238 0.086 Z3Q 1 N1C polymer 1 1 13 ? ? ? PRD_900075 N2B N5 N 0 1 N N N -6.409 -7.959 51.226 -2.811 1.464 -1.594 Z3Q 1 N2 polymer 1 1 14 ? ? ? PRD_900075 O11 O1 O 0 1 N N N -7.394 -7.638 53.926 -3.807 -0.137 0.570 Z3Q 1 O1 polymer 1 1 15 ? ? ? PRD_900075 O7B O11 O 0 1 N N N -5.427 -10.114 51.004 -4.095 2.464 -0.085 Z3Q 1 O21 polymer 1 1 16 ? ? ? PRD_900075 O3B O3 O 0 1 N N N -8.145 -6.488 49.289 0.041 1.863 -1.562 Z3Q 1 O3 polymer 1 1 17 ? ? ? PRD_900075 O4B O5 O 0 1 N N N -8.241 -3.686 50.194 1.598 -0.343 -0.616 Z3Q 1 O4 polymer 1 1 18 ? ? ? PRD_900075 O5B O7 O 0 1 N N N -8.351 -5.667 53.339 -1.657 -0.963 0.947 Z3Q 1 O5 polymer 1 1 19 ? ? ? PRD_900075 O6B O9 O 0 1 N N N -9.206 -3.019 54.157 -0.092 -3.158 1.950 Z3Q 1 O6 polymer 1 1 20 ? ? ? PRD_900075 C1A C3 C 0 1 N N S -9.238 -2.850 49.695 2.699 -0.078 0.256 NGA 2 C1 polymer 1 1 21 ? ? ? PRD_900075 C2A C5 C 0 1 N N R -8.591 -1.527 49.303 3.972 -0.695 -0.328 NGA 2 C2 polymer 1 1 22 ? ? ? PRD_900075 C3A C7 C 0 1 N N R -9.668 -0.582 48.785 5.157 -0.356 0.582 NGA 2 C3 polymer 1 1 23 ? ? ? PRD_900075 C4A C9 C 0 1 N N R -10.290 -1.222 47.562 5.260 1.166 0.722 NGA 2 C4 polymer 1 1 24 ? ? ? PRD_900075 C5A C11 C 0 1 N N R -10.899 -2.552 47.999 3.937 1.711 1.265 NGA 2 C5 polymer 1 1 25 ? ? ? PRD_900075 C6A C13 C 0 1 N N N -11.704 -3.270 46.909 4.010 3.237 1.352 NGA 2 C6 polymer 1 1 26 ? ? ? PRD_900075 C7A C15 C 0 1 N N N -6.544 -0.891 50.547 3.216 -2.704 -1.480 NGA 2 C7 polymer 1 1 27 ? ? ? PRD_900075 C8A C17 C 0 1 N N N -5.973 -0.097 51.649 3.058 -4.200 -1.565 NGA 2 C8 polymer 1 1 28 ? ? ? PRD_900075 N2A N4 N 0 1 N N N -7.865 -0.791 50.397 3.819 -2.149 -0.410 NGA 2 N2 polymer 1 1 29 ? ? ? PRD_900075 O3A O2 O 0 1 N N N -9.031 0.641 48.455 6.362 -0.867 0.007 NGA 2 O3 polymer 1 1 30 ? ? ? PRD_900075 O4A O4 O 0 1 N N N -9.266 -1.388 46.554 5.527 1.747 -0.556 NGA 2 O4 polymer 1 1 31 ? ? ? PRD_900075 O5A O6 O 0 1 N N N -9.884 -3.425 48.547 2.872 1.334 0.389 NGA 2 O5 polymer 1 1 32 ? ? ? PRD_900075 O6A O8 O 0 1 N N N -12.015 -4.638 47.203 2.821 3.737 1.967 NGA 2 O6 polymer 1 1 33 ? ? ? PRD_900075 O7A O10 O 0 1 N N N -5.753 -1.636 49.782 2.800 -1.999 -2.375 NGA 2 O7 polymer 1 1 34 ? ? ? PRD_900075 H1B H7 H 0 1 N N N -6.347 -6.087 53.025 -2.660 -1.097 -0.855 Z3Q 1 H1 polymer 1 1 35 ? ? ? PRD_900075 H12 H1 H 0 1 N N N -6.138 -6.952 55.452 -4.677 -1.960 0.134 Z3Q 1 H111 polymer 1 1 36 ? ? ? PRD_900075 H12A H2 H 0 1 N N N -7.858 -6.449 55.583 -3.902 -1.843 1.732 Z3Q 1 H112 polymer 1 1 37 ? ? ? PRD_900075 H13 H3 H 0 1 N N N -7.179 -9.415 55.602 -6.333 -1.802 2.018 Z3Q 1 H121 polymer 1 1 38 ? ? ? PRD_900075 H13A H4 H 0 1 N N N -6.915 -8.454 57.097 -5.673 -0.198 2.418 Z3Q 1 H122 polymer 1 1 39 ? ? ? PRD_900075 H2B H10 H 0 1 N N N -8.491 -7.733 51.570 -1.854 1.626 0.267 Z3Q 1 H2 polymer 1 1 40 ? ? ? PRD_900075 H8B H30 H 0 1 N N N -7.349 -11.180 51.732 -5.570 2.097 -2.531 Z3Q 1 H2M1 polymer 1 1 41 ? ? ? PRD_900075 H8BA H31 H 0 1 N N N -7.824 -9.794 52.771 -5.180 3.745 -1.984 Z3Q 1 H2M2 polymer 1 1 42 ? ? ? PRD_900075 H8BB H32 H 0 1 N N N -8.413 -9.890 51.077 -4.182 2.963 -3.233 Z3Q 1 H2M3 polymer 1 1 43 ? ? ? PRD_900075 HN2B H11 H 0 1 N N N -5.581 -7.496 50.910 -2.628 1.277 -2.528 Z3Q 1 H2N polymer 1 1 44 ? ? ? PRD_900075 H3B H14 H 0 1 N N N -6.649 -5.584 50.410 -0.644 -0.041 -1.988 Z3Q 1 H3 polymer 1 1 45 ? ? ? PRD_900075 HO3B H15 H 0 1 N N N -7.587 -7.195 48.986 -0.462 2.327 -2.245 Z3Q 1 H3O polymer 1 1 46 ? ? ? PRD_900075 H4B H18 H 0 1 N N N -9.624 -5.161 50.809 0.455 0.683 0.768 Z3Q 1 H4 polymer 1 1 47 ? ? ? PRD_900075 H5B H20 H 0 1 N N N -7.491 -3.918 52.583 -0.454 -1.998 -0.376 Z3Q 1 H5 polymer 1 1 48 ? ? ? PRD_900075 H6B H24 H 0 1 N N N -9.862 -2.944 52.217 1.498 -2.068 1.206 Z3Q 1 H61 polymer 1 1 49 ? ? ? PRD_900075 H6BA H25 H 0 1 N N N -10.431 -4.344 53.187 0.498 -1.234 2.420 Z3Q 1 H62 polymer 1 1 50 ? ? ? PRD_900075 HO6B H26 H 0 1 N N N -9.938 -2.502 54.474 0.390 -3.609 2.657 Z3Q 1 H6O polymer 1 1 51 ? ? ? PRD_900075 H1A H6 H 0 1 N N N -9.988 -2.650 50.475 2.499 -0.514 1.235 NGA 2 H1 polymer 1 1 52 ? ? ? PRD_900075 H2A H8 H 0 1 N N N -7.882 -1.721 48.485 4.149 -0.290 -1.324 NGA 2 H2 polymer 1 1 53 ? ? ? PRD_900075 H3A H12 H 0 1 N N N -10.435 -0.435 49.559 5.003 -0.803 1.564 NGA 2 H3 polymer 1 1 54 ? ? ? PRD_900075 H4A H16 H 0 1 N N N -11.091 -0.570 47.182 6.067 1.415 1.412 NGA 2 H4 polymer 1 1 55 ? ? ? PRD_900075 H5A H19 H 0 1 N N N -11.607 -2.321 48.808 3.753 1.298 2.258 NGA 2 H5 polymer 1 1 56 ? ? ? PRD_900075 H6A H21 H 0 1 N N N -11.120 -3.243 45.977 4.876 3.525 1.948 NGA 2 H61 polymer 1 1 57 ? ? ? PRD_900075 H6AA H22 H 0 1 N N N -12.649 -2.726 46.766 4.103 3.653 0.349 NGA 2 H62 polymer 1 1 58 ? ? ? PRD_900075 H8A H27 H 0 1 N N N -4.884 -0.247 51.684 3.489 -4.662 -0.676 NGA 2 H81 polymer 1 1 59 ? ? ? PRD_900075 H8AA H28 H 0 1 N N N -6.191 0.968 51.484 1.999 -4.451 -1.627 NGA 2 H82 polymer 1 1 60 ? ? ? PRD_900075 H8AB H29 H 0 1 N N N -6.418 -0.420 52.602 3.571 -4.570 -2.452 NGA 2 H83 polymer 1 1 61 ? ? ? PRD_900075 HN2A H9 H 0 1 N N N -8.386 -0.214 51.026 4.151 -2.714 0.306 NGA 2 HN2 polymer 1 1 62 ? ? ? PRD_900075 HO3A H13 H 0 1 N N N -8.650 1.021 49.238 7.155 -0.688 0.532 NGA 2 HO3 polymer 1 1 63 ? ? ? PRD_900075 HO4A H17 H 0 1 N N N -8.917 -0.538 46.314 5.600 2.711 -0.542 NGA 2 HO4 polymer 1 1 64 ? ? ? PRD_900075 HO6A H23 H 0 1 N N N -12.512 -5.012 46.485 2.798 4.699 2.055 NGA 2 HO6 polymer 1 1 65 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900075 O4A C4A SING N N 1 PRD_900075 C6A O6A SING N N 2 PRD_900075 C6A C5A SING N N 3 PRD_900075 C4A C5A SING N N 4 PRD_900075 C4A C3A SING N N 5 PRD_900075 C5A O5A SING N N 6 PRD_900075 O3A C3A SING N N 7 PRD_900075 O5A C1A SING N N 8 PRD_900075 C3A C2A SING N N 9 PRD_900075 O3B C3B SING N N 10 PRD_900075 C2A C1A SING N N 11 PRD_900075 C2A N2A SING N N 12 PRD_900075 C1A O4B SING N N 13 PRD_900075 O7A C7A DOUB N N 14 PRD_900075 O4B C4B SING N N 15 PRD_900075 N2A C7A SING N N 16 PRD_900075 C3B C4B SING N N 17 PRD_900075 C3B C2B SING N N 18 PRD_900075 C7A C8A SING N N 19 PRD_900075 C4B C5B SING N N 20 PRD_900075 O7B C7B DOUB N N 21 PRD_900075 N2B C7B SING N N 22 PRD_900075 N2B C2B SING N N 23 PRD_900075 C7B C8B SING N N 24 PRD_900075 C2B C1B SING N N 25 PRD_900075 C5B C6B SING N N 26 PRD_900075 C5B O5B SING N N 27 PRD_900075 C6B O6B SING N N 28 PRD_900075 C1B O5B SING N N 29 PRD_900075 C1B O11 SING N N 30 PRD_900075 O11 C12 SING N N 31 PRD_900075 C12 C13 SING N N 32 PRD_900075 C13 N14 SING N N 33 PRD_900075 N14 N15 DOUB N N 34 PRD_900075 N15 N16 DOUB N N 35 PRD_900075 C12 H12 SING N N 36 PRD_900075 C12 H12A SING N N 37 PRD_900075 C13 H13 SING N N 38 PRD_900075 C13 H13A SING N N 39 PRD_900075 C1A H1A SING N N 40 PRD_900075 C1B H1B SING N N 41 PRD_900075 C2A H2A SING N N 42 PRD_900075 N2A HN2A SING N N 43 PRD_900075 C2B H2B SING N N 44 PRD_900075 N2B HN2B SING N N 45 PRD_900075 C3A H3A SING N N 46 PRD_900075 O3A HO3A SING N N 47 PRD_900075 C3B H3B SING N N 48 PRD_900075 O3B HO3B SING N N 49 PRD_900075 C4A H4A SING N N 50 PRD_900075 O4A HO4A SING N N 51 PRD_900075 C4B H4B SING N N 52 PRD_900075 C5A H5A SING N N 53 PRD_900075 C5B H5B SING N N 54 PRD_900075 C6A H6A SING N N 55 PRD_900075 C6A H6AA SING N N 56 PRD_900075 O6A HO6A SING N N 57 PRD_900075 C6B H6B SING N N 58 PRD_900075 C6B H6BA SING N N 59 PRD_900075 O6B HO6B SING N N 60 PRD_900075 C8A H8A SING N N 61 PRD_900075 C8A H8AA SING N N 62 PRD_900075 C8A H8AB SING N N 63 PRD_900075 C8B H8B SING N N 64 PRD_900075 C8B H8BA SING N N 65 PRD_900075 C8B H8BB SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900075 SMILES ACDLabs 12.01 "O(CCN=[N+]=[N-])C1OC(C(C(C1NC(C)=O)O)OC2C(NC(C)=O)C(O)C(C(O2)CO)O)CO" PRD_900075 InChI InChI 1.03 ;InChI=1S/C18H31N5O11/c1-7(26)21-11-14(29)13(28)9(5-24)32-18(11)34-16-10(6-25)33-17(31-4-3-20-23-19)12(15(16)30)22-8(2)2 7/h9-18,24-25,28-30H,3-6H2,1-2H3,(H,21,26)(H,22,27)/t9-,10-,11-,12-,13+,14-,15-,16-,17-,18+/m1/s1 ; PRD_900075 InChIKey InChI 1.03 YKVRUFHLKAPVGV-CHCRNKISSA-N PRD_900075 SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](OCCN=[N+]=[N-])O[C@@H]2CO" PRD_900075 SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1O[CH]2[CH](O)[CH](NC(C)=O)[CH](OCCN=[N+]=[N-])O[CH]2CO" PRD_900075 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)NC(=O)C)OCCN=[N+]=[N-])CO)CO)O)O" PRD_900075 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OC2C(OC(C(C2O)NC(=O)C)OCCN=[N+]=[N-])CO)CO)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900075 "SYSTEMATIC NAME" ACDLabs 12.01 "2-azidoethyl 2-(acetylamino)-4-O-[2-(acetylamino)-2-deoxy-beta-D-galactopyranosyl]-2-deoxy-beta-D-glucopyranoside" PRD_900075 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-6-(2-azidoethoxy)-2-(hydroxymethyl )-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide ; #