data_PRDCC_900083
#
_chem_comp.id PRD_900083
_chem_comp.name "FORSMANN ANTIGEN"
_chem_comp.type saccharide
_chem_comp.formula "C16 H28 N2 O11"
_chem_comp.pdbx_release_status REF_ONLY
_chem_comp.formula_weight 424.400
_chem_comp.pdbx_type ?
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge ?
_chem_comp.pdbx_initial_date ?
_chem_comp.pdbx_modified_date ?
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ?
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag ?
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag ?
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_pcm ?
_chem_comp.pdbx_processing_site ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_residue_numbering
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_polymer_type
_chem_comp_atom.pdbx_ref_id
_chem_comp_atom.pdbx_component_id
_chem_comp_atom.pdbx_ordinal
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
PRD_900083 C1B C9 C 0 1 N N R -14.196 30.866 21.048 -3.258 -0.795 0.110 NGA 1 C1 polymer 1 1 1 ? ? ?
PRD_900083 C2B C10 C 0 1 N N R -14.467 30.363 19.618 -1.845 -0.754 -0.478 NGA 1 C2 polymer 1 1 2 ? ? ?
PRD_900083 C3B C11 C 0 1 N N R -14.676 31.612 18.740 -0.991 0.223 0.336 NGA 1 C3 polymer 1 1 3 ? ? ?
PRD_900083 C4B C12 C 0 1 N N R -15.876 32.348 19.360 -1.664 1.599 0.330 NGA 1 C4 polymer 1 1 4 ? ? ?
PRD_900083 C5B C13 C 0 1 N N R -15.611 32.685 20.830 -3.084 1.467 0.886 NGA 1 C5 polymer 1 1 5 ? ? ?
PRD_900083 C6B C14 C 0 1 N N N -16.803 33.429 21.456 -3.783 2.826 0.827 NGA 1 C6 polymer 1 1 6 ? ? ?
PRD_900083 C7B C15 C 0 1 N N N -13.439 28.568 18.235 -1.493 -2.982 -1.400 NGA 1 C7 polymer 1 1 7 ? ? ?
PRD_900083 C8B C16 C 0 1 N N N -12.134 27.824 17.923 -0.881 -4.357 -1.338 NGA 1 C8 polymer 1 1 8 ? ? ?
PRD_900083 N2B N2 N 0 1 N N N -13.334 29.529 19.163 -1.250 -2.092 -0.417 NGA 1 N2 polymer 1 1 9 ? ? ?
PRD_900083 O1B O7 O 0 1 N N N -13.739 29.876 21.976 -4.077 -1.663 -0.678 NGA 1 O1 polymer 1 1 10 ? ? ?
PRD_900083 O3B O8 O 0 1 N N N -14.942 31.367 17.343 0.309 0.324 -0.250 NGA 1 O3 polymer 1 1 11 ? ? ?
PRD_900083 O1A O1 O 0 1 N N N -17.041 31.521 19.305 -1.719 2.098 -1.008 NGA 1 O4 polymer 1 1 12 ? ? ?
PRD_900083 O5B O9 O 0 1 N N N -15.411 31.440 21.535 -3.814 0.521 0.103 NGA 1 O5 polymer 1 1 13 ? ? ?
PRD_900083 O6B O10 O 0 1 N N N -17.849 32.485 21.733 -5.065 2.730 1.452 NGA 1 O6 polymer 1 1 14 ? ? ?
PRD_900083 O7B O11 O 0 1 N N N -14.481 28.276 17.645 -2.203 -2.675 -2.334 NGA 1 O7 polymer 1 1 15 ? ? ?
PRD_900083 O5A O4 O 0 1 N N N -12.921 32.165 16.247 1.564 -0.531 1.522 A2G 2 O polymer 1 1 16 ? ? ?
PRD_900083 C1 C8 C 0 1 N N S -14.335 32.407 16.527 1.348 0.609 0.688 A2G 2 C1 polymer 1 1 17 ? ? ?
PRD_900083 C2A C1 C 0 1 N N R -15.089 32.588 15.201 2.639 0.940 -0.065 A2G 2 C2 polymer 1 1 18 ? ? ?
PRD_900083 N2A N1 N 0 1 N N N -16.537 32.701 15.455 2.405 2.072 -0.965 A2G 2 N2 polymer 1 1 19 ? ? ?
PRD_900083 C3A C2 C 0 1 N N R -14.822 31.431 14.230 3.072 -0.282 -0.881 A2G 2 C3 polymer 1 1 20 ? ? ?
PRD_900083 O3A O2 O 0 1 N N N -15.303 31.777 12.924 4.315 -0.007 -1.530 A2G 2 O3 polymer 1 1 21 ? ? ?
PRD_900083 C4A C3 C 0 1 N N R -13.336 31.109 14.117 3.239 -1.479 0.060 A2G 2 C4 polymer 1 1 22 ? ? ?
PRD_900083 O4A O3 O 0 1 N N N -12.678 32.163 13.407 4.281 -1.206 1.000 A2G 2 O4 polymer 1 1 23 ? ? ?
PRD_900083 C5A C4 C 0 1 N N R -12.726 30.944 15.498 1.925 -1.716 0.809 A2G 2 C5 polymer 1 1 24 ? ? ?
PRD_900083 C6A C5 C 0 1 N N N -11.268 30.572 15.261 2.101 -2.872 1.796 A2G 2 C6 polymer 1 1 25 ? ? ?
PRD_900083 O6A O5 O 0 1 N N N -10.446 31.440 16.024 0.846 -3.170 2.410 A2G 2 O6 polymer 1 1 26 ? ? ?
PRD_900083 C7A C6 C 0 1 N N N -17.219 33.845 15.308 2.511 3.333 -0.503 A2G 2 C7 polymer 1 1 27 ? ? ?
PRD_900083 O7A O6 O 0 1 N N N -16.716 34.914 14.960 2.802 3.532 0.658 A2G 2 O7 polymer 1 1 28 ? ? ?
PRD_900083 C8A C7 C 0 1 N N N -18.724 33.752 15.625 2.270 4.498 -1.429 A2G 2 C8 polymer 1 1 29 ? ? ?
PRD_900083 HBE H16 H 0 1 N N N -13.436 31.658 20.977 -3.216 -1.167 1.134 NGA 1 H1 polymer 1 1 30 ? ? ?
PRD_900083 HBB H17 H 0 1 N N N -15.392 29.767 19.618 -1.891 -0.421 -1.515 NGA 1 H2 polymer 1 1 31 ? ? ?
PRD_900083 "HB'" H18 H 0 1 N N N -13.789 32.255 18.838 -0.902 -0.136 1.361 NGA 1 H3 polymer 1 1 32 ? ? ?
PRD_900083 HBA H19 H 0 1 N N N -16.045 33.283 18.805 -1.091 2.288 0.951 NGA 1 H4 polymer 1 1 33 ? ? ?
PRD_900083 HBC H20 H 0 1 N N N -14.713 33.316 20.902 -3.039 1.125 1.920 NGA 1 H5 polymer 1 1 34 ? ? ?
PRD_900083 "HB'1" H21 H 0 1 N N N -16.486 33.913 22.391 -3.180 3.569 1.350 NGA 1 H61 polymer 1 1 35 ? ? ?
PRD_900083 "HB'2" H22 H 0 1 N N N -17.171 34.192 20.755 -3.908 3.126 -0.213 NGA 1 H62 polymer 1 1 36 ? ? ?
PRD_900083 HBA1 H23 H 0 1 N N N -12.320 27.065 17.149 -1.188 -4.931 -2.213 NGA 1 H81 polymer 1 1 37 ? ? ?
PRD_900083 HBA2 H24 H 0 1 N N N -11.381 28.540 17.561 0.206 -4.272 -1.322 NGA 1 H82 polymer 1 1 38 ? ? ?
PRD_900083 HBA3 H25 H 0 1 N N N -11.765 27.333 18.836 -1.218 -4.865 -0.434 NGA 1 H83 polymer 1 1 39 ? ? ?
PRD_900083 HBG H26 H 0 1 N N N -12.436 29.692 19.572 -0.682 -2.336 0.330 NGA 1 HN2 polymer 1 1 40 ? ? ?
PRD_900083 HBF H27 H 0 1 N N N -13.600 30.278 22.826 -4.988 -1.737 -0.363 NGA 1 HO1 polymer 1 1 41 ? ? ?
PRD_900083 HAH H11 H 0 1 N N N -17.776 31.983 19.690 -2.134 2.968 -1.087 NGA 1 HO4 polymer 1 1 42 ? ? ?
PRD_900083 HBD H28 H 0 1 N N N -18.590 32.937 22.120 -5.566 3.557 1.452 NGA 1 HO6 polymer 1 1 43 ? ? ?
PRD_900083 H1 H14 H 0 1 N N N -14.414 33.358 17.074 1.059 1.460 1.305 A2G 2 H1 polymer 1 1 44 ? ? ?
PRD_900083 HAA H1 H 0 1 N N N -14.736 33.518 14.731 3.422 1.197 0.648 A2G 2 H2 polymer 1 1 45 ? ? ?
PRD_900083 "HA'" H10 H 0 1 N N N -17.034 31.885 15.751 2.172 1.913 -1.893 A2G 2 HN2 polymer 1 1 46 ? ? ?
PRD_900083 HAB H2 H 0 1 N N N -15.348 30.538 14.598 2.312 -0.508 -1.630 A2G 2 H3 polymer 1 1 47 ? ? ?
PRD_900083 HAC H12 H 0 1 N N N -15.137 31.059 12.324 4.650 -0.740 -2.066 A2G 2 HO3 polymer 1 1 48 ? ? ?
PRD_900083 HAD H3 H 0 1 N N N -13.224 30.163 13.568 3.494 -2.365 -0.519 A2G 2 H4 polymer 1 1 49 ? ? ?
PRD_900083 HAE H13 H 0 1 N N N -11.751 31.966 13.334 4.441 -1.922 1.628 A2G 2 HO4 polymer 1 1 50 ? ? ?
PRD_900083 HAF H4 H 0 1 N N N -13.226 30.108 16.010 1.139 -1.964 0.095 A2G 2 H5 polymer 1 1 51 ? ? ?
PRD_900083 HAA2 H6 H 0 1 N N N -11.028 30.679 14.193 2.822 -2.588 2.562 A2G 2 H6 polymer 1 1 52 ? ? ?
PRD_900083 "HA'2" H8 H 0 1 N N N -19.197 33.025 14.948 2.401 5.431 -0.881 A2G 2 H8 polymer 1 1 53 ? ? ?
PRD_900083 "HA'1" H7 H 0 1 N N N -19.190 34.739 15.486 1.254 4.446 -1.820 A2G 2 H8A polymer 1 1 54 ? ? ?
PRD_900083 "HA'3" H9 H 0 1 N N N -18.860 33.426 16.667 2.980 4.459 -2.254 A2G 2 H8B polymer 1 1 55 ? ? ?
PRD_900083 HAA1 H5 H 0 1 N N N -11.096 29.531 15.573 2.463 -3.751 1.264 A2G 2 H14 polymer 1 1 56 ? ? ?
PRD_900083 HAG H15 H 0 1 N N N -9.533 31.217 15.884 0.882 -3.894 3.049 A2G 2 H15 polymer 1 1 57 ? ? ?
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PRD_900083 C2A C3A SING N N 1
PRD_900083 C2A N2A SING N N 2
PRD_900083 C2A C1 SING N N 3
PRD_900083 C3A O3A SING N N 4
PRD_900083 C3A C4A SING N N 5
PRD_900083 C4A O4A SING N N 6
PRD_900083 C4A C5A SING N N 7
PRD_900083 C5A C6A SING N N 8
PRD_900083 C5A O5A SING N N 9
PRD_900083 C6A O6A SING N N 10
PRD_900083 C7A C8A SING N N 11
PRD_900083 C7A N2A SING N N 12
PRD_900083 C7A O7A DOUB N N 13
PRD_900083 O1A C4B SING N N 14
PRD_900083 O5A C1 SING N N 15
PRD_900083 C1 O3B SING N N 16
PRD_900083 C1B C2B SING N N 17
PRD_900083 C1B O5B SING N N 18
PRD_900083 C1B O1B SING N N 19
PRD_900083 C2B C3B SING N N 20
PRD_900083 C2B N2B SING N N 21
PRD_900083 C3B O3B SING N N 22
PRD_900083 C3B C4B SING N N 23
PRD_900083 C4B C5B SING N N 24
PRD_900083 C5B O5B SING N N 25
PRD_900083 C5B C6B SING N N 26
PRD_900083 C6B O6B SING N N 27
PRD_900083 C7B O7B DOUB N N 28
PRD_900083 C7B C8B SING N N 29
PRD_900083 C7B N2B SING N N 30
PRD_900083 C2A HAA SING N N 31
PRD_900083 C3A HAB SING N N 32
PRD_900083 C4A HAD SING N N 33
PRD_900083 C5A HAF SING N N 34
PRD_900083 C6A HAA1 SING N N 35
PRD_900083 C6A HAA2 SING N N 36
PRD_900083 C8A "HA'1" SING N N 37
PRD_900083 C8A "HA'2" SING N N 38
PRD_900083 C8A "HA'3" SING N N 39
PRD_900083 N2A "HA'" SING N N 40
PRD_900083 O1A HAH SING N N 41
PRD_900083 O3A HAC SING N N 42
PRD_900083 O4A HAE SING N N 43
PRD_900083 C1 H1 SING N N 44
PRD_900083 O6A HAG SING N N 45
PRD_900083 C1B HBE SING N N 46
PRD_900083 C2B HBB SING N N 47
PRD_900083 C3B "HB'" SING N N 48
PRD_900083 C4B HBA SING N N 49
PRD_900083 C5B HBC SING N N 50
PRD_900083 C6B "HB'1" SING N N 51
PRD_900083 C6B "HB'2" SING N N 52
PRD_900083 C8B HBA1 SING N N 53
PRD_900083 C8B HBA2 SING N N 54
PRD_900083 C8B HBA3 SING N N 55
PRD_900083 N2B HBG SING N N 56
PRD_900083 O1B HBF SING N N 57
PRD_900083 O6B HBD SING N N 58
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PRD_900083 InChI InChI 1.06 "InChI=1S/C16H28N2O11/c1-5(21)17-9-13(25)11(23)7(3-19)28-16(9)29-14-10(18-6(2)22)15(26)27-8(4-20)12(14)24/h7-16,19-20,23-26H,3-4H2,1-2H3,(H,17,21)(H,18,22)/t7-,8-,9-,10-,11+,12+,13-,14-,15-,16-/m1/s1"
PRD_900083 InChIKey InChI 1.06 FJGXDMQHNYEUHI-LRFIHEIOSA-N
PRD_900083 SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1O[C@H]2[C@@H](O)[C@@H](CO)O[C@@H](O)[C@@H]2NC(C)=O"
PRD_900083 SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1O[CH]2[CH](O)[CH](CO)O[CH](O)[CH]2NC(C)=O"
PRD_900083 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O[C@@H]2[C@H]([C@@H](O[C@@H]([C@@H]2O)CO)O)NC(=O)C)CO)O)O"
PRD_900083 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OC2C(C(OC(C2O)CO)O)NC(=O)C)CO)O)O"
#
_pdbx_chem_comp_identifier.comp_id PRD_900083
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
;~{N}-[(2~{S},3~{R},4~{R},5~{R},6~{R})-2-[(2~{R},3~{R},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-3,6-bis(oxidanyl
)oxan-4-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide
;
#