data_PRDCC_900118 # _chem_comp.id PRD_900118 _chem_comp.name 6-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose _chem_comp.type saccharide _chem_comp.formula "C12 H22 O11" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 342.296 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_pcm ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900118 "C1'" C6 C 0 1 N N S -43.218 -8.562 -2.059 -2.710 0.356 1.777 MAN 1 C1 polymer 1 1 1 ? ? ? PRD_900118 "C2'" C5 C 0 1 N N S -43.144 -8.824 -0.561 -4.009 0.654 1.025 MAN 1 C2 polymer 1 1 2 ? ? ? PRD_900118 "C3'" C4 C 0 1 N N S -41.805 -8.882 0.001 -4.231 -0.424 -0.041 MAN 1 C3 polymer 1 1 3 ? ? ? PRD_900118 "C4'" C3 C 0 1 N N S -40.885 -9.511 -0.954 -3.016 -0.463 -0.973 MAN 1 C4 polymer 1 1 4 ? ? ? PRD_900118 "C5'" C2 C 0 1 N N R -40.734 -8.545 -2.073 -1.755 -0.717 -0.143 MAN 1 C5 polymer 1 1 5 ? ? ? PRD_900118 "C6'" C1 C 0 1 N N N -39.784 -9.258 -2.950 -0.529 -0.698 -1.059 MAN 1 C6 polymer 1 1 6 ? ? ? PRD_900118 "O1'" O6 O 0 1 N N N -44.047 -7.488 -2.377 -2.825 -0.900 2.448 MAN 1 O1 polymer 1 1 7 ? ? ? PRD_900118 "O2'" O5 O 0 1 N N N -43.644 -10.140 -0.305 -3.915 1.934 0.397 MAN 1 O2 polymer 1 1 8 ? ? ? PRD_900118 "O3'" O4 O 0 1 N N N -41.836 -9.667 1.223 -5.403 -0.114 -0.798 MAN 1 O3 polymer 1 1 9 ? ? ? PRD_900118 "O4'" O3 O 0 1 N N N -39.604 -9.972 -0.427 -3.179 -1.513 -1.928 MAN 1 O4 polymer 1 1 10 ? ? ? PRD_900118 "O5'" O2 O 0 1 N N N -41.967 -8.544 -2.853 -1.625 0.303 0.849 MAN 1 O5 polymer 1 1 11 ? ? ? PRD_900118 "O6'" O1 O 0 1 N N N -40.424 -10.541 -3.090 0.633 -1.050 -0.306 MAN 1 O6 polymer 1 1 12 ? ? ? PRD_900118 C1 C7 C 0 1 N N S -40.444 -10.896 -4.398 1.840 -1.062 -1.072 MAN 2 C1 polymer 1 1 13 ? ? ? PRD_900118 C2 C8 C 0 1 N N S -40.638 -12.413 -4.395 2.965 -1.686 -0.242 MAN 2 C2 polymer 1 1 14 ? ? ? PRD_900118 C3 C9 C 0 1 N N S -39.445 -13.098 -3.861 3.211 -0.824 1.000 MAN 2 C3 polymer 1 1 15 ? ? ? PRD_900118 C4 C10 C 0 1 N N S -38.223 -12.667 -4.521 3.539 0.606 0.558 MAN 2 C4 polymer 1 1 16 ? ? ? PRD_900118 C5 C11 C 0 1 N N R -38.023 -11.160 -4.344 2.391 1.141 -0.303 MAN 2 C5 polymer 1 1 17 ? ? ? PRD_900118 C6 C12 C 0 1 N N N -36.781 -10.748 -5.046 2.738 2.547 -0.797 MAN 2 C6 polymer 1 1 18 ? ? ? PRD_900118 O2 O7 O 0 1 N N N -41.026 -12.977 -5.650 4.159 -1.747 -1.026 MAN 2 O2 polymer 1 1 19 ? ? ? PRD_900118 O3 O8 O 0 1 N N N -39.626 -14.555 -4.003 4.308 -1.359 1.743 MAN 2 O3 polymer 1 1 20 ? ? ? PRD_900118 O4 O9 O 0 1 N N N -37.125 -13.335 -3.867 3.699 1.437 1.710 MAN 2 O4 polymer 1 1 21 ? ? ? PRD_900118 O5 O10 O 0 1 N N N -39.149 -10.449 -4.927 2.195 0.277 -1.423 MAN 2 O5 polymer 1 1 22 ? ? ? PRD_900118 O6 O11 O 0 1 N N N -36.905 -11.092 -6.398 1.621 3.093 -1.502 MAN 2 O6 polymer 1 1 23 ? ? ? PRD_900118 H10 H10 H 0 1 N N N -43.753 -9.444 -2.442 -2.525 1.143 2.508 MAN 1 H1 polymer 1 1 24 ? ? ? PRD_900118 H8 H8 H 0 1 N N N -43.747 -8.072 -0.031 -4.844 0.652 1.725 MAN 1 H2 polymer 1 1 25 ? ? ? PRD_900118 H6 H6 H 0 1 N N N -41.456 -7.863 0.226 -4.354 -1.394 0.441 MAN 1 H3 polymer 1 1 26 ? ? ? PRD_900118 H4 H4 H 0 1 N N N -41.401 -10.392 -1.364 -2.925 0.491 -1.493 MAN 1 H4 polymer 1 1 27 ? ? ? PRD_900118 H3 H3 H 0 1 N N N -40.394 -7.547 -1.759 -1.830 -1.689 0.343 MAN 1 H5 polymer 1 1 28 ? ? ? PRD_900118 H1 H1 H 0 1 N N N -38.795 -9.352 -2.477 -0.669 -1.415 -1.868 MAN 1 H61 polymer 1 1 29 ? ? ? PRD_900118 H2 H2 H 0 1 N N N -39.679 -8.754 -3.922 -0.403 0.301 -1.477 MAN 1 H62 polymer 1 1 30 ? ? ? PRD_900118 H11 H11 H 0 1 N N N -44.837 -7.531 -1.851 -2.036 -1.153 2.947 MAN 1 HO1 polymer 1 1 31 ? ? ? PRD_900118 H9 H9 H 0 1 N N N -43.604 -10.319 0.627 -3.770 2.665 1.013 MAN 1 HO2 polymer 1 1 32 ? ? ? PRD_900118 H7 H7 H 0 1 N N N -42.431 -9.263 1.844 -6.212 -0.066 -0.269 MAN 1 HO3 polymer 1 1 33 ? ? ? PRD_900118 H5 H5 H 0 1 N N N -39.755 -10.585 0.283 -3.963 -1.419 -2.486 MAN 1 HO4 polymer 1 1 34 ? ? ? PRD_900118 H12 H12 H 0 1 N N N -41.269 -10.419 -4.947 1.689 -1.648 -1.979 MAN 2 H1 polymer 1 1 35 ? ? ? PRD_900118 H13 H13 H 0 1 N N N -41.455 -12.611 -3.686 2.677 -2.692 0.064 MAN 2 H2 polymer 1 1 36 ? ? ? PRD_900118 H15 H15 H 0 1 N N N -39.364 -12.864 -2.789 2.317 -0.817 1.622 MAN 2 H3 polymer 1 1 37 ? ? ? PRD_900118 H17 H17 H 0 1 N N N -38.251 -12.914 -5.593 4.461 0.607 -0.023 MAN 2 H4 polymer 1 1 38 ? ? ? PRD_900118 H19 H19 H 0 1 N N N -37.940 -10.929 -3.272 1.478 1.180 0.292 MAN 2 H5 polymer 1 1 39 ? ? ? PRD_900118 H20 H20 H 0 1 N N N -35.916 -11.268 -4.608 2.975 3.184 0.055 MAN 2 H61 polymer 1 1 40 ? ? ? PRD_900118 H21 H21 H 0 1 N N N -36.643 -9.661 -4.950 3.599 2.497 -1.463 MAN 2 H62 polymer 1 1 41 ? ? ? PRD_900118 H14 H14 H 0 1 N N N -41.124 -13.918 -5.558 4.074 -2.274 -1.832 MAN 2 HO2 polymer 1 1 42 ? ? ? PRD_900118 H16 H16 H 0 1 N N N -40.428 -14.819 -3.567 4.170 -2.266 2.049 MAN 2 HO3 polymer 1 1 43 ? ? ? PRD_900118 H18 H18 H 0 1 N N N -37.224 -14.275 -3.962 4.411 1.156 2.302 MAN 2 HO4 polymer 1 1 44 ? ? ? PRD_900118 H22 H22 H 0 1 N N N -36.118 -10.835 -6.864 1.769 3.985 -1.845 MAN 2 HO6 polymer 1 1 45 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900118 O6 C6 SING N N 1 PRD_900118 O2 C2 SING N N 2 PRD_900118 C6 C5 SING N N 3 PRD_900118 O5 C1 SING N N 4 PRD_900118 O5 C5 SING N N 5 PRD_900118 C4 C5 SING N N 6 PRD_900118 C4 O4 SING N N 7 PRD_900118 C4 C3 SING N N 8 PRD_900118 C1 C2 SING N N 9 PRD_900118 C1 "O6'" SING N N 10 PRD_900118 C2 C3 SING N N 11 PRD_900118 O3 C3 SING N N 12 PRD_900118 "O6'" "C6'" SING N N 13 PRD_900118 "C6'" "C5'" SING N N 14 PRD_900118 "O5'" "C5'" SING N N 15 PRD_900118 "O5'" "C1'" SING N N 16 PRD_900118 "O1'" "C1'" SING N N 17 PRD_900118 "C5'" "C4'" SING N N 18 PRD_900118 "C1'" "C2'" SING N N 19 PRD_900118 "C4'" "O4'" SING N N 20 PRD_900118 "C4'" "C3'" SING N N 21 PRD_900118 "C2'" "O2'" SING N N 22 PRD_900118 "C2'" "C3'" SING N N 23 PRD_900118 "C3'" "O3'" SING N N 24 PRD_900118 "C6'" H1 SING N N 25 PRD_900118 "C6'" H2 SING N N 26 PRD_900118 "C5'" H3 SING N N 27 PRD_900118 "C4'" H4 SING N N 28 PRD_900118 "O4'" H5 SING N N 29 PRD_900118 "C3'" H6 SING N N 30 PRD_900118 "O3'" H7 SING N N 31 PRD_900118 "C2'" H8 SING N N 32 PRD_900118 "O2'" H9 SING N N 33 PRD_900118 "C1'" H10 SING N N 34 PRD_900118 "O1'" H11 SING N N 35 PRD_900118 C1 H12 SING N N 36 PRD_900118 C2 H13 SING N N 37 PRD_900118 O2 H14 SING N N 38 PRD_900118 C3 H15 SING N N 39 PRD_900118 O3 H16 SING N N 40 PRD_900118 C4 H17 SING N N 41 PRD_900118 O4 H18 SING N N 42 PRD_900118 C5 H19 SING N N 43 PRD_900118 C6 H20 SING N N 44 PRD_900118 C6 H21 SING N N 45 PRD_900118 O6 H22 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900118 SMILES ACDLabs 12.01 "C2(C(O)C(O)C(O)C(COC1C(C(C(C(CO)O1)O)O)O)O2)O" PRD_900118 InChI InChI 1.03 ;InChI=1S/C12H22O11/c13-1-3-5(14)8(17)10(19)12(23-3)21-2-4-6(15)7(16)9(18)11(20)22-4/h3-20H,1-2H2/t3-,4-,5-,6-,7+,8+,9+, 10+,11+,12+/m1/s1 ; PRD_900118 InChIKey InChI 1.03 DLRVVLDZNNYCBX-ONPLHCRPSA-N PRD_900118 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@H](OC[C@H]2O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]2O)[C@@H](O)[C@@H](O)[C@@H]1O" PRD_900118 SMILES CACTVS 3.385 "OC[CH]1O[CH](OC[CH]2O[CH](O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O" PRD_900118 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OC[C@@H]2[C@H]([C@@H]([C@@H]([C@H](O2)O)O)O)O)O)O)O)O" PRD_900118 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OCC2C(C(C(C(O2)O)O)O)O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900118 "SYSTEMATIC NAME" ACDLabs 12.01 6-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose PRD_900118 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy methyl]oxane-2,3,4,5-tetrol ; #