data_wwPDB_remediated_restraints_file_for_PDB_entry_1bjb # This wwPDB archive file contains, for PDB entry 1bjb: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389-396. ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_1bjb _Entry.Title 'wwPDB remediated NMR restraints for PDB entry 1bjb' _Entry.Version_type original _Entry.NMR_STAR_version 3.1.0.8 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details 'Contains the remediated restraint lists and coordinates for PDB entry 1bjb' _Entry.PDB_coordinate_file_version 3.20 loop_ _Related_entries.Database_name _Related_entries.Database_accession_code _Related_entries.Relationship _Related_entries.Entry_ID PDB 1bjb 'Master copy' rr_1bjb stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_1bjb _Assembly.ID 1 _Assembly.Name 1bjb _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state 'not present' _Assembly.Molecular_mass 3258.3953 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 'AMYLOID BETA PEPTIDE' 1 $AMYLOID_BETA_PEPTIDE A . no . . . . . . rr_1bjb 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_AMYLOID_BETA_PEPTIDE _Entity.Sf_category entity _Entity.Sf_framecode AMYLOID_BETA_PEPTIDE _Entity.Entry_ID rr_1bjb _Entity.ID 1 _Entity.Name AMYLOID_BETA_PEPTIDE _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; DAEFRHDSGYEVHHQELVFF AEDVGSNK ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 28 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Parent_entity_ID 1 _Entity.Formula_weight 3258.3953 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . ASP . rr_1bjb 1 2 . ALA . rr_1bjb 1 3 . GLU . rr_1bjb 1 4 . PHE . rr_1bjb 1 5 . ARG . rr_1bjb 1 6 . HIS . rr_1bjb 1 7 . ASP . rr_1bjb 1 8 . SER . rr_1bjb 1 9 . GLY . rr_1bjb 1 10 . TYR . rr_1bjb 1 11 . GLU . rr_1bjb 1 12 . VAL . rr_1bjb 1 13 . HIS . rr_1bjb 1 14 . HIS . rr_1bjb 1 15 . GLN . rr_1bjb 1 16 . GLU . rr_1bjb 1 17 . LEU . rr_1bjb 1 18 . VAL . rr_1bjb 1 19 . PHE . rr_1bjb 1 20 . PHE . rr_1bjb 1 21 . ALA . rr_1bjb 1 22 . GLU . rr_1bjb 1 23 . ASP . rr_1bjb 1 24 . VAL . rr_1bjb 1 25 . GLY . rr_1bjb 1 26 . SER . rr_1bjb 1 27 . ASN . rr_1bjb 1 28 . LYS . rr_1bjb 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . ASP 1 1 rr_1bjb 1 . ALA 2 2 rr_1bjb 1 . GLU 3 3 rr_1bjb 1 . PHE 4 4 rr_1bjb 1 . ARG 5 5 rr_1bjb 1 . HIS 6 6 rr_1bjb 1 . ASP 7 7 rr_1bjb 1 . SER 8 8 rr_1bjb 1 . GLY 9 9 rr_1bjb 1 . TYR 10 10 rr_1bjb 1 . GLU 11 11 rr_1bjb 1 . VAL 12 12 rr_1bjb 1 . HIS 13 13 rr_1bjb 1 . HIS 14 14 rr_1bjb 1 . GLN 15 15 rr_1bjb 1 . GLU 16 16 rr_1bjb 1 . LEU 17 17 rr_1bjb 1 . VAL 18 18 rr_1bjb 1 . PHE 19 19 rr_1bjb 1 . PHE 20 20 rr_1bjb 1 . ALA 21 21 rr_1bjb 1 . GLU 22 22 rr_1bjb 1 . ASP 23 23 rr_1bjb 1 . VAL 24 24 rr_1bjb 1 . GLY 25 25 rr_1bjb 1 . SER 26 26 rr_1bjb 1 . ASN 27 27 rr_1bjb 1 . LYS 28 28 rr_1bjb 1 stop_ save_ ############################## # Structure determinations # ############################## ########################## # Conformer statistics # ########################## save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_1bjb _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 14 save_ ########################### # Constraint Statistics # ########################### save_constraint_statistics _Constraint_stat_list.Sf_framecode constraint_statistics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_1bjb _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 1bjb.mr . . 'MR format' 1 comment 'Not applicable' 'Not applicable' 0 rr_1bjb 1 1 1bjb.mr . . XPLOR/CNS 2 distance NOE simple 56 rr_1bjb 1 1 1bjb.mr . . 'MR format' 3 'nomenclature mapping' 'Not applicable' 'Not applicable' 0 rr_1bjb 1 stop_ save_ save_CNS/XPLOR_distance_constraints_2 _Gen_dist_constraint_list.Sf_category general_distance_constraints _Gen_dist_constraint_list.Sf_framecode CNS/XPLOR_distance_constraints_2 _Gen_dist_constraint_list.Entry_ID rr_1bjb _Gen_dist_constraint_list.ID 1 _Gen_dist_constraint_list.Constraint_type NOE _Gen_dist_constraint_list.Details 'Generated by Wattos' _Gen_dist_constraint_list.Constraint_file_ID 1 _Gen_dist_constraint_list.Block_ID 2 loop_ _Gen_dist_constraint_software.Software_ID _Gen_dist_constraint_software.Software_label _Gen_dist_constraint_software.Method_ID _Gen_dist_constraint_software.Method_label _Gen_dist_constraint_software.Entry_ID _Gen_dist_constraint_software.Gen_dist_constraint_list_ID . . . . rr_1bjb 1 stop_ loop_ _Gen_dist_constraint.ID _Gen_dist_constraint.Member_ID _Gen_dist_constraint.Member_logic_code _Gen_dist_constraint.Assembly_atom_ID_1 _Gen_dist_constraint.Entity_assembly_ID_1 _Gen_dist_constraint.Entity_ID_1 _Gen_dist_constraint.Comp_index_ID_1 _Gen_dist_constraint.Seq_ID_1 _Gen_dist_constraint.Comp_ID_1 _Gen_dist_constraint.Atom_ID_1 _Gen_dist_constraint.Atom_type_1 _Gen_dist_constraint.Atom_isotope_number_1 _Gen_dist_constraint.Resonance_ID_1 _Gen_dist_constraint.Assembly_atom_ID_2 _Gen_dist_constraint.Entity_assembly_ID_2 _Gen_dist_constraint.Entity_ID_2 _Gen_dist_constraint.Comp_index_ID_2 _Gen_dist_constraint.Seq_ID_2 _Gen_dist_constraint.Comp_ID_2 _Gen_dist_constraint.Atom_ID_2 _Gen_dist_constraint.Atom_type_2 _Gen_dist_constraint.Atom_isotope_number_2 _Gen_dist_constraint.Resonance_ID_2 _Gen_dist_constraint.Intensity_val _Gen_dist_constraint.Intensity_lower_val_err _Gen_dist_constraint.Intensity_upper_val_err _Gen_dist_constraint.Distance_val _Gen_dist_constraint.Distance_lower_bound_val _Gen_dist_constraint.Distance_upper_bound_val _Gen_dist_constraint.Contribution_fractional_val _Gen_dist_constraint.Spectral_peak_ID _Gen_dist_constraint.Spectral_peak_list_ID _Gen_dist_constraint.PDB_record_ID_1 _Gen_dist_constraint.PDB_model_num_1 _Gen_dist_constraint.PDB_strand_ID_1 _Gen_dist_constraint.PDB_ins_code_1 _Gen_dist_constraint.PDB_residue_no_1 _Gen_dist_constraint.PDB_residue_name_1 _Gen_dist_constraint.PDB_atom_name_1 _Gen_dist_constraint.PDB_record_ID_2 _Gen_dist_constraint.PDB_model_num_2 _Gen_dist_constraint.PDB_strand_ID_2 _Gen_dist_constraint.PDB_ins_code_2 _Gen_dist_constraint.PDB_residue_no_2 _Gen_dist_constraint.PDB_residue_name_2 _Gen_dist_constraint.PDB_atom_name_2 _Gen_dist_constraint.Auth_entity_assembly_ID_1 _Gen_dist_constraint.Auth_asym_ID_1 _Gen_dist_constraint.Auth_chain_ID_1 _Gen_dist_constraint.Auth_seq_ID_1 _Gen_dist_constraint.Auth_comp_ID_1 _Gen_dist_constraint.Auth_atom_ID_1 _Gen_dist_constraint.Auth_alt_ID_1 _Gen_dist_constraint.Auth_atom_name_1 _Gen_dist_constraint.Auth_entity_assembly_ID_2 _Gen_dist_constraint.Auth_asym_ID_2 _Gen_dist_constraint.Auth_chain_ID_2 _Gen_dist_constraint.Auth_seq_ID_2 _Gen_dist_constraint.Auth_comp_ID_2 _Gen_dist_constraint.Auth_atom_ID_2 _Gen_dist_constraint.Auth_alt_ID_2 _Gen_dist_constraint.Auth_atom_name_2 _Gen_dist_constraint.Entry_ID _Gen_dist_constraint.Gen_dist_constraint_list_ID 1 1 OR . 1 1 27 27 ASN HB2 H . . . 1 1 27 27 ASN HD22 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB2 . . A . 27 ASN HD22 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 1 2 OR . 1 1 27 27 ASN HB3 H . . . 1 1 27 27 ASN HD22 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB3 . . A . 27 ASN HD22 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 1 3 OR . 1 1 27 27 ASN HD21 H . . . 1 1 27 27 ASN HB2 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HD21 . . A . 27 ASN HB2 . . . 27 . HD2* . . . . . 27 . HB* . . rr_1bjb 1 1 4 OR . 1 1 27 27 ASN HB3 H . . . 1 1 27 27 ASN HD21 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB3 . . A . 27 ASN HD21 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 2 1 OR . 1 1 27 27 ASN HB2 H . . . 1 1 27 27 ASN HD22 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB2 . . A . 27 ASN HD22 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 2 2 OR . 1 1 27 27 ASN HB3 H . . . 1 1 27 27 ASN HD22 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB3 . . A . 27 ASN HD22 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 2 3 OR . 1 1 27 27 ASN HD21 H . . . 1 1 27 27 ASN HB2 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HD21 . . A . 27 ASN HB2 . . . 27 . HD2* . . . . . 27 . HB* . . rr_1bjb 1 2 4 OR . 1 1 27 27 ASN HB3 H . . . 1 1 27 27 ASN HD21 H . . . . . 0.0 0.0 5.4 . . . . . A . 27 ASN HB3 . . A . 27 ASN HD21 . . . 27 . HB* . . . . . 27 . HD2* . . rr_1bjb 1 3 1 OR . 1 1 15 15 GLN HE22 H . . . 1 1 15 15 GLN HG2 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE22 . . A . 15 GLN HG2 . . . 15 . HE2* . . . . . 15 . HG* . . rr_1bjb 1 3 2 OR . 1 1 15 15 GLN HE21 H . . . 1 1 15 15 GLN HG2 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE21 . . A . 15 GLN HG2 . . . 15 . HE2* . . . . . 15 . HG* . . rr_1bjb 1 3 3 OR . 1 1 15 15 GLN HG3 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HG3 . . A . 15 GLN HE21 . . . 15 . HG* . . . . . 15 . HE2* . . rr_1bjb 1 3 4 OR . 1 1 15 15 GLN HG3 H . . . 1 1 15 15 GLN HE22 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HG3 . . A . 15 GLN HE22 . . . 15 . HG* . . . . . 15 . HE2* . . rr_1bjb 1 4 1 OR . 1 1 15 15 GLN HB2 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HB2 . . A . 15 GLN HE21 . . . 15 . HB* . . . . . 15 . HE2* . . rr_1bjb 1 4 2 OR . 1 1 15 15 GLN HB3 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HB3 . . A . 15 GLN HE21 . . . 15 . HB* . . . . . 15 . HE2* . . rr_1bjb 1 4 3 OR . 1 1 15 15 GLN HE22 H . . . 1 1 15 15 GLN HB2 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE22 . . A . 15 GLN HB2 . . . 15 . HE2* . . . . . 15 . HB* . . rr_1bjb 1 4 4 OR . 1 1 15 15 GLN HE22 H . . . 1 1 15 15 GLN HB3 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE22 . . A . 15 GLN HB3 . . . 15 . HE2* . . . . . 15 . HB* . . rr_1bjb 1 5 1 OR . 1 1 15 15 GLN HE22 H . . . 1 1 15 15 GLN HG2 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE22 . . A . 15 GLN HG2 . . . 15 . HE2* . . . . . 15 . HG* . . rr_1bjb 1 5 2 OR . 1 1 15 15 GLN HE21 H . . . 1 1 15 15 GLN HG2 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HE21 . . A . 15 GLN HG2 . . . 15 . HE2* . . . . . 15 . HG* . . rr_1bjb 1 5 3 OR . 1 1 15 15 GLN HG3 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HG3 . . A . 15 GLN HE21 . . . 15 . HG* . . . . . 15 . HE2* . . rr_1bjb 1 5 4 OR . 1 1 15 15 GLN HG3 H . . . 1 1 15 15 GLN HE22 H . . . . . 0.0 0.0 4.4 . . . . . A . 15 GLN HG3 . . A . 15 GLN HE22 . . . 15 . HG* . . . . . 15 . HE2* . . rr_1bjb 1 6 1 . . 1 1 5 5 ARG HA H . . . 1 1 5 5 ARG HE H . . . . . 0.0 0.0 4.2 . . . . . A . 5 ARG HA . . A . 5 ARG HE . . . 5 . HA . . . . . 5 . HE . . rr_1bjb 1 7 1 OR . 1 1 5 5 ARG HE H . . . 1 1 5 5 ARG HB2 H . . . . . 0.0 0.0 4.4 . . . . . A . 5 ARG HE . . A . 5 ARG HB2 . . . 5 . HE . . . . . 5 . HB* . . rr_1bjb 1 7 2 OR . 1 1 5 5 ARG HE H . . . 1 1 5 5 ARG HB3 H . . . . . 0.0 0.0 4.4 . . . . . A . 5 ARG HE . . A . 5 ARG HB3 . . . 5 . HE . . . . . 5 . HB* . . rr_1bjb 1 8 1 OR . 1 1 5 5 ARG HE H . . . 1 1 5 5 ARG HG2 H . . . . . 0.0 0.0 4.4 . . . . . A . 5 ARG HE . . A . 5 ARG HG2 . . . 5 . HE . . . . . 5 . HG* . . rr_1bjb 1 8 2 OR . 1 1 5 5 ARG HE H . . . 1 1 5 5 ARG HG3 H . . . . . 0.0 0.0 4.4 . . . . . A . 5 ARG HE . . A . 5 ARG HG3 . . . 5 . HE . . . . . 5 . HG* . . rr_1bjb 1 9 1 . . 1 1 14 14 HIS HA H . . . 1 1 14 14 HIS HD2 H . . . . . 0.0 0.0 3.4 . . . . . A . 14 HIS HA . . A . 14 HIS HD2 . . . 14 . HA . . . . . 14 . HD2 . . rr_1bjb 1 10 1 . . 1 1 13 13 HIS HA H . . . 1 1 13 13 HIS HD2 H . . . . . 0.0 0.0 3.4 . . . . . A . 13 HIS HA . . A . 13 HIS HD2 . . . 13 . HA . . . . . 13 . HD2 . . rr_1bjb 1 11 1 . . 1 1 6 6 HIS HA H . . . 1 1 6 6 HIS HD2 H . . . . . 0.0 0.0 3.4 . . . . . A . 6 HIS HA . . A . 6 HIS HD2 . . . 6 . HA . . . . . 6 . HD2 . . rr_1bjb 1 12 1 OR . 1 1 14 14 HIS HD2 H . . . 1 1 14 14 HIS HB2 H . . . . . 0.0 0.0 4.4 . . . . . A . 14 HIS HD2 . . A . 14 HIS HB2 . . . 14 . HD2 . . . . . 14 . HB* . . rr_1bjb 1 12 2 OR . 1 1 14 14 HIS HD2 H . . . 1 1 14 14 HIS HB3 H . . . . . 0.0 0.0 4.4 . . . . . A . 14 HIS HD2 . . A . 14 HIS HB3 . . . 14 . HD2 . . . . . 14 . HB* . . rr_1bjb 1 13 1 OR . 1 1 13 13 HIS HD2 H . . . 1 1 13 13 HIS HB2 H . . . . . 0.0 0.0 4.4 . . . . . A . 13 HIS HD2 . . A . 13 HIS HB2 . . . 13 . HD2 . . . . . 13 . HB* . . rr_1bjb 1 13 2 OR . 1 1 13 13 HIS HD2 H . . . 1 1 13 13 HIS HB3 H . . . . . 0.0 0.0 4.4 . . . . . A . 13 HIS HD2 . . A . 13 HIS HB3 . . . 13 . HD2 . . . . . 13 . HB* . . rr_1bjb 1 14 1 OR . 1 1 6 6 HIS HD2 H . . . 1 1 6 6 HIS HB2 H . . . . . 0.0 0.0 4.4 . . . . . A . 6 HIS HD2 . . A . 6 HIS HB2 . . . 6 . HD2 . . . . . 6 . HB* . . rr_1bjb 1 14 2 OR . 1 1 6 6 HIS HD2 H . . . 1 1 6 6 HIS HB3 H . . . . . 0.0 0.0 4.4 . . . . . A . 6 HIS HD2 . . A . 6 HIS HB3 . . . 6 . HD2 . . . . . 6 . HB* . . rr_1bjb 1 15 1 . . 1 1 13 13 HIS HD2 H . . . 1 1 12 12 VAL HA H . . . . . 0.0 0.0 5.0 . . . . . A . 13 HIS HD2 . . A . 12 VAL HA . . . 13 . HD2 . . . . . 12 . HA . . rr_1bjb 1 16 1 . . 1 1 13 13 HIS HD2 H . . . 1 1 12 12 VAL HB H . . . . . 0.0 0.0 4.2 . . . . . A . 13 HIS HD2 . . A . 12 VAL HB . . . 13 . HD2 . . . . . 12 . HB . . rr_1bjb 1 17 1 . . 1 1 4 4 PHE HA H . . . 1 1 4 4 PHE QD H . . . . . 0.0 0.0 4.8 . . . . . A . 4 PHE HA . . A . 4 PHE QD . . . 4 . HA . . . . . 4 . HD* . . rr_1bjb 1 18 1 . . 1 1 20 20 PHE HA H . . . 1 1 20 20 PHE QD H . . . . . 0.0 0.0 4.8 . . . . . A . 20 PHE HA . . A . 20 PHE QD . . . 20 . HA . . . . . 20 . HD* . . rr_1bjb 1 19 1 . . 1 1 20 20 PHE QD H . . . 1 1 17 17 LEU HA H . . . . . 0.0 0.0 5.4 . . . . . A . 20 PHE QD . . A . 17 LEU HA . . . 20 . HD* . . . . . 17 . HA . . rr_1bjb 1 20 1 . . 1 1 20 20 PHE QD H . . . 1 1 21 21 ALA HA H . . . . . 0.0 0.0 6.2 . . . . . A . 20 PHE QD . . A . 21 ALA HA . . . 20 . HD* . . . . . 21 . HA . . rr_1bjb 1 21 1 . . 1 1 19 19 PHE HA H . . . 1 1 19 19 PHE QD H . . . . . 0.0 0.0 4.8 . . . . . A . 19 PHE HA . . A . 19 PHE QD . . . 19 . HA . . . . . 19 . HD* . . rr_1bjb 1 22 1 . . 1 1 17 17 LEU HA H . . . 1 1 19 19 PHE QD H . . . . . 0.0 0.0 5.4 . . . . . A . 17 LEU HA . . A . 19 PHE QD . . . 17 . HA . . . . . 19 . HD* . . rr_1bjb 1 23 1 . . 1 1 10 10 TYR HA H . . . 1 1 10 10 TYR QD H . . . . . 0.0 0.0 4.8 . . . . . A . 10 TYR HA . . A . 10 TYR QD . . . 10 . HA . . . . . 10 . HD* . . rr_1bjb 1 24 1 . . 1 1 10 10 TYR QD H . . . 1 1 11 11 GLU HA H . . . . . 0.0 0.0 5.4 . . . . . A . 10 TYR QD . . A . 11 GLU HA . . . 10 . HD* . . . . . 11 . HA . . rr_1bjb 1 25 1 . . 1 1 11 11 GLU HA H . . . 1 1 10 10 TYR QE H . . . . . 0.0 0.0 7.0 . . . . . A . 11 GLU HA . . A . 10 TYR QE . . . 11 . HA . . . . . 10 . HE* . . rr_1bjb 1 26 1 OR . 1 1 10 10 TYR QD H . . . 1 1 9 9 GLY HA2 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QD . . A . 9 GLY HA2 . . . 10 . HD* . . . . . 9 . HA* . . rr_1bjb 1 26 2 OR . 1 1 10 10 TYR QD H . . . 1 1 9 9 GLY HA3 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QD . . A . 9 GLY HA3 . . . 10 . HD* . . . . . 9 . HA* . . rr_1bjb 1 27 1 . . 1 1 12 12 VAL HA H . . . 1 1 10 10 TYR QE H . . . . . 0.0 0.0 6.4 . . . . . A . 12 VAL HA . . A . 10 TYR QE . . . 12 . HA* . . . . . 10 . HE* . . rr_1bjb 1 28 1 OR . 1 1 4 4 PHE QD H . . . 1 1 4 4 PHE HB2 H . . . . . 0.0 0.0 5.8 . . . . . A . 4 PHE QD . . A . 4 PHE HB2 . . . 4 . HD* . . . . . 4 . HB* . . rr_1bjb 1 28 2 OR . 1 1 4 4 PHE QD H . . . 1 1 4 4 PHE HB3 H . . . . . 0.0 0.0 5.8 . . . . . A . 4 PHE QD . . A . 4 PHE HB3 . . . 4 . HD* . . . . . 4 . HB* . . rr_1bjb 1 29 1 OR . 1 1 20 20 PHE QE H . . . 1 1 20 20 PHE HB2 H . . . . . 0.0 0.0 6.4 . . . . . A . 20 PHE QE . . A . 20 PHE HB2 . . . 20 . HE* . . . . . 20 . HB* . . rr_1bjb 1 29 2 OR . 1 1 20 20 PHE HB3 H . . . 1 1 20 20 PHE QE H . . . . . 0.0 0.0 6.4 . . . . . A . 20 PHE HB3 . . A . 20 PHE QE . . . 20 . HB* . . . . . 20 . HE* . . rr_1bjb 1 30 1 OR . 1 1 20 20 PHE QD H . . . 1 1 20 20 PHE HB2 H . . . . . 0.0 0.0 5.8 . . . . . A . 20 PHE QD . . A . 20 PHE HB2 . . . 20 . HD* . . . . . 20 . HB* . . rr_1bjb 1 30 2 OR . 1 1 20 20 PHE QD H . . . 1 1 20 20 PHE HB3 H . . . . . 0.0 0.0 5.8 . . . . . A . 20 PHE QD . . A . 20 PHE HB3 . . . 20 . HD* . . . . . 20 . HB* . . rr_1bjb 1 31 1 OR . 1 1 10 10 TYR QD H . . . 1 1 10 10 TYR HB2 H . . . . . 0.0 0.0 5.8 . . . . . A . 10 TYR QD . . A . 10 TYR HB2 . . . 10 . HD* . . . . . 10 . HB* . . rr_1bjb 1 31 2 OR . 1 1 10 10 TYR QD H . . . 1 1 10 10 TYR HB3 H . . . . . 0.0 0.0 5.8 . . . . . A . 10 TYR QD . . A . 10 TYR HB3 . . . 10 . HD* . . . . . 10 . HB* . . rr_1bjb 1 32 1 OR . 1 1 10 10 TYR QE H . . . 1 1 10 10 TYR HB2 H . . . . . 0.0 0.0 6.4 . . . . . A . 10 TYR QE . . A . 10 TYR HB2 . . . 10 . HE* . . . . . 10 . HB* . . rr_1bjb 1 32 2 OR . 1 1 10 10 TYR QE H . . . 1 1 10 10 TYR HB3 H . . . . . 0.0 0.0 6.4 . . . . . A . 10 TYR QE . . A . 10 TYR HB3 . . . 10 . HE* . . . . . 10 . HB* . . rr_1bjb 1 33 1 OR . 1 1 19 19 PHE QD H . . . 1 1 16 16 GLU HG2 H . . . . . 0.0 0.0 8.0 . . . . . A . 19 PHE QD . . A . 16 GLU HG2 . . . 19 . HD* . . . . . 16 . HG* . . rr_1bjb 1 33 2 OR . 1 1 19 19 PHE QD H . . . 1 1 16 16 GLU HG3 H . . . . . 0.0 0.0 8.0 . . . . . A . 19 PHE QD . . A . 16 GLU HG3 . . . 19 . HD* . . . . . 16 . HG* . . rr_1bjb 1 34 1 OR . 1 1 19 19 PHE QD H . . . 1 1 15 15 GLN HG2 H . . . . . 0.0 0.0 7.2 . . . . . A . 19 PHE QD . . A . 15 GLN HG2 . . . 19 . HD* . . . . . 15 . HG* . . rr_1bjb 1 34 2 OR . 1 1 15 15 GLN HG3 H . . . 1 1 19 19 PHE QD H . . . . . 0.0 0.0 7.2 . . . . . A . 15 GLN HG3 . . A . 19 PHE QD . . . 15 . HG* . . . . . 19 . HD* . . rr_1bjb 1 35 1 OR . 1 1 19 19 PHE QD H . . . 1 1 16 16 GLU HB2 H . . . . . 0.0 0.0 7.2 . . . . . A . 19 PHE QD . . A . 16 GLU HB2 . . . 19 . HD* . . . . . 16 . HB* . . rr_1bjb 1 35 2 OR . 1 1 19 19 PHE QD H . . . 1 1 16 16 GLU HB3 H . . . . . 0.0 0.0 7.2 . . . . . A . 19 PHE QD . . A . 16 GLU HB3 . . . 19 . HD* . . . . . 16 . HB* . . rr_1bjb 1 36 1 OR . 1 1 19 19 PHE QD H . . . 1 1 15 15 GLN HB2 H . . . . . 0.0 0.0 7.2 . . . . . A . 19 PHE QD . . A . 15 GLN HB2 . . . 19 . HD* . . . . . 15 . HB* . . rr_1bjb 1 36 2 OR . 1 1 15 15 GLN HB3 H . . . 1 1 19 19 PHE QD H . . . . . 0.0 0.0 7.2 . . . . . A . 15 GLN HB3 . . A . 19 PHE QD . . . 15 . HB* . . . . . 19 . HD* . . rr_1bjb 1 37 1 OR . 1 1 10 10 TYR QD H . . . 1 1 11 11 GLU HG2 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QD . . A . 11 GLU HG2 . . . 10 . HD* . . . . . 11 . HG* . . rr_1bjb 1 37 2 OR . 1 1 10 10 TYR QD H . . . 1 1 11 11 GLU HG3 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QD . . A . 11 GLU HG3 . . . 10 . HD* . . . . . 11 . HG* . . rr_1bjb 1 38 1 OR . 1 1 10 10 TYR QD H . . . 1 1 11 11 GLU HB2 H . . . . . 0.0 0.0 8.0 . . . . . A . 10 TYR QD . . A . 11 GLU HB2 . . . 10 . HD* . . . . . 11 . HB* . . rr_1bjb 1 38 2 OR . 1 1 10 10 TYR QD H . . . 1 1 11 11 GLU HB3 H . . . . . 0.0 0.0 8.0 . . . . . A . 10 TYR QD . . A . 11 GLU HB3 . . . 10 . HD* . . . . . 11 . HB* . . rr_1bjb 1 39 1 OR . 1 1 4 4 PHE QD H . . . 1 1 5 5 ARG HG2 H . . . . . 0.0 0.0 7.2 . . . . . A . 4 PHE QD . . A . 5 ARG HG2 . . . 4 . HD* . . . . . 5 . HG* . . rr_1bjb 1 39 2 OR . 1 1 5 5 ARG HG3 H . . . 1 1 4 4 PHE QD H . . . . . 0.0 0.0 7.2 . . . . . A . 5 ARG HG3 . . A . 4 PHE QD . . . 5 . HG* . . . . . 4 . HD* . . rr_1bjb 1 40 1 . . 1 1 20 20 PHE QD H . . . 1 1 21 21 ALA MB H . . . . . 0.0 0.0 6.4 . . . . . A . 20 PHE QD . . A . 21 ALA MB . . . 20 . HD* . . . . . 21 . HB* . . rr_1bjb 1 41 1 . . 1 1 4 4 PHE QD H . . . 1 1 2 2 ALA MB H . . . . . 0.0 0.0 6.4 . . . . . A . 4 PHE QD . . A . 2 ALA MB . . . 4 . HD* . . . . . 2 . HB* . . rr_1bjb 1 42 1 . . 1 1 14 14 HIS HD2 H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 5.7 . . . . . A . 14 HIS HD2 . . A . 12 VAL MG2 . . . 14 . HD2 . . . . . 12 . HG2* . . rr_1bjb 1 43 1 . . 1 1 14 14 HIS HD2 H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 4.2 . . . . . A . 14 HIS HD2 . . A . 12 VAL MG1 . . . 14 . HD2 . . . . . 12 . HG1* . . rr_1bjb 1 44 1 . . 1 1 13 13 HIS HD2 H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 5.7 . . . . . A . 13 HIS HD2 . . A . 12 VAL MG2 . . . 13 . HD2 . . . . . 12 . HG2* . . rr_1bjb 1 45 1 . . 1 1 13 13 HIS HD2 H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 5.7 . . . . . A . 13 HIS HD2 . . A . 12 VAL MG1 . . . 13 . HD2 . . . . . 12 . HG1* . . rr_1bjb 1 46 1 OR . 1 1 20 20 PHE QD H . . . 1 1 17 17 LEU MD1 H . . . . . 0.0 0.0 7.2 . . . . . A . 20 PHE QD . . A . 17 LEU MD1 . . . 20 . HD* . . . . . 17 . HD* . . rr_1bjb 1 46 2 OR . 1 1 20 20 PHE QD H . . . 1 1 17 17 LEU MD2 H . . . . . 0.0 0.0 7.2 . . . . . A . 20 PHE QD . . A . 17 LEU MD2 . . . 20 . HD* . . . . . 17 . HD* . . rr_1bjb 1 47 1 . . 1 1 19 19 PHE QD H . . . 1 1 18 18 VAL MG2 H . . . . . 0.0 0.0 7.2 . . . . . A . 19 PHE QD . . A . 18 VAL MG2 . . . 19 . HD* . . . . . 18 . HG2* . . rr_1bjb 1 48 1 . . 1 1 19 19 PHE QD H . . . 1 1 18 18 VAL MG1 H . . . . . 0.0 0.0 6.4 . . . . . A . 19 PHE QD . . A . 18 VAL MG1 . . . 19 . HD* . . . . . 18 . HG1* . . rr_1bjb 1 49 1 . . 1 1 10 10 TYR QD H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 6.4 . . . . . A . 10 TYR QD . . A . 12 VAL MG2 . . . 10 . HD* . . . . . 12 . HG2* . . rr_1bjb 1 50 1 . . 1 1 10 10 TYR QD H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QD . . A . 12 VAL MG1 . . . 10 . HD* . . . . . 12 . HG1* . . rr_1bjb 1 51 1 . . 1 1 10 10 TYR QE H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 6.4 . . . . . A . 10 TYR QE . . A . 12 VAL MG2 . . . 10 . HE* . . . . . 12 . HG2* . . rr_1bjb 1 52 1 . . 1 1 10 10 TYR QE H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 7.2 . . . . . A . 10 TYR QE . . A . 12 VAL MG1 . . . 10 . HE* . . . . . 12 . HG1* . . rr_1bjb 1 53 1 OR . 1 1 12 12 VAL MG2 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 6.7 . . . . . A . 12 VAL MG2 . . A . 15 GLN HE21 . . . 12 . HG2* . . . . . 15 . HE2* . . rr_1bjb 1 53 2 OR . 1 1 15 15 GLN HE22 H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 6.7 . . . . . A . 15 GLN HE22 . . A . 12 VAL MG2 . . . 15 . HE2* . . . . . 12 . HG2* . . rr_1bjb 1 54 1 OR . 1 1 12 12 VAL MG1 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 6.7 . . . . . A . 12 VAL MG1 . . A . 15 GLN HE21 . . . 12 . HG1* . . . . . 15 . HE2* . . rr_1bjb 1 54 2 OR . 1 1 15 15 GLN HE22 H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 6.7 . . . . . A . 15 GLN HE22 . . A . 12 VAL MG1 . . . 15 . HE2* . . . . . 12 . HG1* . . rr_1bjb 1 55 1 OR . 1 1 12 12 VAL MG2 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 5.9 . . . . . A . 12 VAL MG2 . . A . 15 GLN HE21 . . . 12 . HG2* . . . . . 15 . HE2* . . rr_1bjb 1 55 2 OR . 1 1 15 15 GLN HE22 H . . . 1 1 12 12 VAL MG2 H . . . . . 0.0 0.0 5.9 . . . . . A . 15 GLN HE22 . . A . 12 VAL MG2 . . . 15 . HE2* . . . . . 12 . HG2* . . rr_1bjb 1 56 1 OR . 1 1 12 12 VAL MG1 H . . . 1 1 15 15 GLN HE21 H . . . . . 0.0 0.0 5.9 . . . . . A . 12 VAL MG1 . . A . 15 GLN HE21 . . . 12 . HG1* . . . . . 15 . HE2* . . rr_1bjb 1 56 2 OR . 1 1 15 15 GLN HE22 H . . . 1 1 12 12 VAL MG1 H . . . . . 0.0 0.0 5.9 . . . . . A . 15 GLN HE22 . . A . 12 VAL MG1 . . . 15 . HE2* . . . . . 12 . HG1* . . rr_1bjb 1 stop_ loop_ _Gen_dist_constraint_comment_org.ID _Gen_dist_constraint_comment_org.Comment_text _Gen_dist_constraint_comment_org.Comment_begin_line _Gen_dist_constraint_comment_org.Comment_begin_column _Gen_dist_constraint_comment_org.Comment_end_line _Gen_dist_constraint_comment_org.Comment_end_column _Gen_dist_constraint_comment_org.Entry_ID _Gen_dist_constraint_comment_org.Gen_dist_constraint_list_ID 1 ; sp070896arom.tbl, noe's for bA1-28E16, pH 5.6, 296K, SDS/H2O noe's to aromatic protons ; 1 1 2 28 rr_1bjb 1 2 ; m assign (resid 27 and name HBu )(resid 27 and name HD2* ) 0.0 0.0 3.4 ! m stronger of pair assign (resid 27 and name HBd )(resid 27 and name HD2* ) 0.0 0.0 4.2 ! w ; 4 74 6 122 rr_1bjb 1 3 m 7 74 7 121 rr_1bjb 1 4 mg 8 74 8 121 rr_1bjb 1 5 mg 9 74 9 121 rr_1bjb 1 6 mg 10 74 10 121 rr_1bjb 1 7 w 11 74 11 121 rr_1bjb 1 8 ; m assign (resid 5 and name HBu )(resid 5 and name HE ) 0.0 0.0 3.4 ! m ; 12 74 13 122 rr_1bjb 1 9 mg 14 74 14 121 rr_1bjb 1 10 m 15 74 15 121 rr_1bjb 1 11 m 16 74 16 121 rr_1bjb 1 12 m 17 74 17 121 rr_1bjb 1 13 ; m assign (resid 14 and name HBu )(resid 14 and name HD2 ) 0.0 0.0 3.4 ! m ; 18 74 19 122 rr_1bjb 1 14 ; m assign (resid 13 and name HBu )(resid 13 and name HD2 ) 0.0 0.0 3.4 ! m ; 20 74 21 122 rr_1bjb 1 15 ; m assign (resid 6 and name HBu )(resid 6 and name HD2 ) 0.0 0.0 3.4 ! m part olapped ; 22 74 23 122 rr_1bjb 1 16 vw 24 74 24 121 rr_1bjb 1 17 w 25 74 25 121 rr_1bjb 1 18 'sa think only D*' 26 74 26 121 rr_1bjb 1 19 ; sa think only D* assign (resid 17 and name HA )(resid 19 and name HE* ) 0.0 0.0 6.2 ! wa uncertain, wrong ; 27 74 28 129 rr_1bjb 1 20 ma 29 74 29 121 rr_1bjb 1 21 wa 30 74 30 121 rr_1bjb 1 22 sa 31 74 31 121 rr_1bjb 1 23 ma 32 74 32 121 rr_1bjb 1 24 ; sa assign (resid 10 and name HA )(resid 10 and name HE* ) 0.0 0.0 6.2 ! ma run4 ; 33 74 34 126 rr_1bjb 1 25 ma 35 74 35 121 rr_1bjb 1 26 vwa 36 74 36 121 rr_1bjb 1 27 'wl uncertain' 37 74 37 121 rr_1bjb 1 28 'ml uncertain' 38 74 38 121 rr_1bjb 1 29 ; sa assign (resid 4 and name HBu )(resid 4 and name HD* ) 0.0 0.0 4.8 ! sa ; 39 74 40 122 rr_1bjb 1 30 'ml uncertain' 41 74 41 121 rr_1bjb 1 31 sl 42 74 42 121 rr_1bjb 1 32 sl 43 74 43 121 rr_1bjb 1 33 ml 44 74 44 121 rr_1bjb 1 34 vwl 45 74 45 121 rr_1bjb 1 35 wl 46 74 46 121 rr_1bjb 1 36 wl 47 74 47 121 rr_1bjb 1 37 wl 48 74 48 121 rr_1bjb 1 38 wl 49 74 49 121 rr_1bjb 1 39 vwl 50 74 50 121 rr_1bjb 1 40 wl 51 74 51 121 rr_1bjb 1 41 'ml mma' 52 74 52 121 rr_1bjb 1 42 ml 53 74 53 121 rr_1bjb 1 43 'wm stronger of pair' 54 75 54 122 rr_1bjb 1 44 w 55 75 55 122 rr_1bjb 1 45 wm 56 75 56 122 rr_1bjb 1 46 'wm stronger of pair' 57 75 57 122 rr_1bjb 1 47 wl 58 74 58 121 rr_1bjb 1 48 wl 59 75 59 122 rr_1bjb 1 49 ml 60 75 60 122 rr_1bjb 1 50 ml 61 75 61 122 rr_1bjb 1 51 wl 62 75 62 122 rr_1bjb 1 52 ml 63 75 63 122 rr_1bjb 1 53 wl 64 75 64 122 rr_1bjb 1 54 wm 65 75 65 122 rr_1bjb 1 55 wm 66 75 66 122 rr_1bjb 1 56 mm 67 75 67 122 rr_1bjb 1 57 'mm stronger of pair' 68 75 68 122 rr_1bjb 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_1bjb _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details 'Generated by Wattos' _Org_constr_file_comment.Comment "*HEADER GLYCOPROTEIN 23-JUN-98 1BJB *TITLE SOLUTION NMR STRUCTURE OF AMYLOID BETA[E16], RESIDUES 1-28, *TITLE 2 14 STRUCTURES *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: AMYLOID BETA-PEPTIDE; *COMPND 3 CHAIN: NULL; *COMPND 4 FRAGMENT: ABETA [F16], RESIDUES 1-28; *COMPND 5 ENGINEERED: YES; *COMPND 6 MUTATION: K16E *SOURCE MOL_ID: 1; *SOURCE 2 SYNTHETIC: YES; *SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 4 ORGANISM_COMMON: HUMAN *KEYWDS GLYCOPROTEIN, AMYLOID BETA-PEPTIDE, ALZHEIMER'S DISEASE *EXPDTA NMR, 14 STRUCTURES *AUTHOR S.-A.POULSEN,A.A.WATSON,D.J.CRAIK *REVDAT 2 18-NOV-98 1BJBA 1 COMPND REMARK TITLE *REVDAT 1 04-NOV-98 1BJB 0" save_