data_wwPDB_remediated_restraints_file_for_PDB_entry_1qo6 # This wwPDB archive file contains, for PDB entry 1qo6: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389–396. save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_1qo6 _Entry.Title "wwPDB remediated NMR restraints for PDB entry 1qo6" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 1qo6" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_1qo6 _Assembly.ID 1 _Assembly.Name 1qo6 _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "all free" _Assembly.Molecular_mass 11170.1696 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 FIBRONECTIN 1 $FIBRONECTIN A . no . . . . . . rr_1qo6 1 stop_ save_ save_FIBRONECTIN _Entity.Sf_category entity _Entity.Sf_framecode FIBRONECTIN _Entity.Entry_ID rr_1qo6 _Entity.ID 1 _Entity.Name FIBRONECTIN _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; YGHCVTDSGVVYSVGMQWLK TQGNKQMLCTCLGNGVSCQE TAVTQTYGGNSNGEPCVLPF TYNGRTFYSCTTEGRQDGHL WCSTTSNYEQDQKYSFCTDH T ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 101 _Entity.Paramagnetic no _Entity.Thiol_state "all free" _Entity.Parent_entity_ID 1 _Entity.Formula_weight 11170.1696 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . TYR . rr_1qo6 1 2 . GLY . rr_1qo6 1 3 . HIS . rr_1qo6 1 4 . CYS . rr_1qo6 1 5 . VAL . rr_1qo6 1 6 . THR . rr_1qo6 1 7 . ASP . rr_1qo6 1 8 . SER . rr_1qo6 1 9 . GLY . rr_1qo6 1 10 . VAL . rr_1qo6 1 11 . VAL . rr_1qo6 1 12 . TYR . rr_1qo6 1 13 . SER . rr_1qo6 1 14 . VAL . rr_1qo6 1 15 . GLY . rr_1qo6 1 16 . MET . rr_1qo6 1 17 . GLN . rr_1qo6 1 18 . TRP . rr_1qo6 1 19 . LEU . rr_1qo6 1 20 . LYS . rr_1qo6 1 21 . THR . rr_1qo6 1 22 . GLN . rr_1qo6 1 23 . GLY . rr_1qo6 1 24 . ASN . rr_1qo6 1 25 . LYS . rr_1qo6 1 26 . GLN . rr_1qo6 1 27 . MET . rr_1qo6 1 28 . LEU . rr_1qo6 1 29 . CYS . rr_1qo6 1 30 . THR . rr_1qo6 1 31 . CYS . rr_1qo6 1 32 . LEU . rr_1qo6 1 33 . GLY . rr_1qo6 1 34 . ASN . rr_1qo6 1 35 . GLY . rr_1qo6 1 36 . VAL . rr_1qo6 1 37 . SER . rr_1qo6 1 38 . CYS . rr_1qo6 1 39 . GLN . rr_1qo6 1 40 . GLU . rr_1qo6 1 41 . THR . rr_1qo6 1 42 . ALA . rr_1qo6 1 43 . VAL . rr_1qo6 1 44 . THR . rr_1qo6 1 45 . GLN . rr_1qo6 1 46 . THR . rr_1qo6 1 47 . TYR . rr_1qo6 1 48 . GLY . rr_1qo6 1 49 . GLY . rr_1qo6 1 50 . ASN . rr_1qo6 1 51 . SER . rr_1qo6 1 52 . ASN . rr_1qo6 1 53 . GLY . rr_1qo6 1 54 . GLU . rr_1qo6 1 55 . PRO . rr_1qo6 1 56 . CYS . rr_1qo6 1 57 . VAL . rr_1qo6 1 58 . LEU . rr_1qo6 1 59 . PRO . rr_1qo6 1 60 . PHE . rr_1qo6 1 61 . THR . rr_1qo6 1 62 . TYR . rr_1qo6 1 63 . ASN . rr_1qo6 1 64 . GLY . rr_1qo6 1 65 . ARG . rr_1qo6 1 66 . THR . rr_1qo6 1 67 . PHE . rr_1qo6 1 68 . TYR . rr_1qo6 1 69 . SER . rr_1qo6 1 70 . CYS . rr_1qo6 1 71 . THR . rr_1qo6 1 72 . THR . rr_1qo6 1 73 . GLU . rr_1qo6 1 74 . GLY . rr_1qo6 1 75 . ARG . rr_1qo6 1 76 . GLN . rr_1qo6 1 77 . ASP . rr_1qo6 1 78 . GLY . rr_1qo6 1 79 . HIS . rr_1qo6 1 80 . LEU . rr_1qo6 1 81 . TRP . rr_1qo6 1 82 . CYS . rr_1qo6 1 83 . SER . rr_1qo6 1 84 . THR . rr_1qo6 1 85 . THR . rr_1qo6 1 86 . SER . rr_1qo6 1 87 . ASN . rr_1qo6 1 88 . TYR . rr_1qo6 1 89 . GLU . rr_1qo6 1 90 . GLN . rr_1qo6 1 91 . ASP . rr_1qo6 1 92 . GLN . rr_1qo6 1 93 . LYS . rr_1qo6 1 94 . TYR . rr_1qo6 1 95 . SER . rr_1qo6 1 96 . PHE . rr_1qo6 1 97 . CYS . rr_1qo6 1 98 . THR . rr_1qo6 1 99 . ASP . rr_1qo6 1 100 . HIS . rr_1qo6 1 101 . THR . rr_1qo6 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . TYR 1 1 rr_1qo6 1 . GLY 2 2 rr_1qo6 1 . HIS 3 3 rr_1qo6 1 . CYS 4 4 rr_1qo6 1 . VAL 5 5 rr_1qo6 1 . THR 6 6 rr_1qo6 1 . ASP 7 7 rr_1qo6 1 . SER 8 8 rr_1qo6 1 . GLY 9 9 rr_1qo6 1 . VAL 10 10 rr_1qo6 1 . VAL 11 11 rr_1qo6 1 . TYR 12 12 rr_1qo6 1 . SER 13 13 rr_1qo6 1 . VAL 14 14 rr_1qo6 1 . GLY 15 15 rr_1qo6 1 . MET 16 16 rr_1qo6 1 . GLN 17 17 rr_1qo6 1 . TRP 18 18 rr_1qo6 1 . LEU 19 19 rr_1qo6 1 . LYS 20 20 rr_1qo6 1 . THR 21 21 rr_1qo6 1 . GLN 22 22 rr_1qo6 1 . GLY 23 23 rr_1qo6 1 . ASN 24 24 rr_1qo6 1 . LYS 25 25 rr_1qo6 1 . GLN 26 26 rr_1qo6 1 . MET 27 27 rr_1qo6 1 . LEU 28 28 rr_1qo6 1 . CYS 29 29 rr_1qo6 1 . THR 30 30 rr_1qo6 1 . CYS 31 31 rr_1qo6 1 . LEU 32 32 rr_1qo6 1 . GLY 33 33 rr_1qo6 1 . ASN 34 34 rr_1qo6 1 . GLY 35 35 rr_1qo6 1 . VAL 36 36 rr_1qo6 1 . SER 37 37 rr_1qo6 1 . CYS 38 38 rr_1qo6 1 . GLN 39 39 rr_1qo6 1 . GLU 40 40 rr_1qo6 1 . THR 41 41 rr_1qo6 1 . ALA 42 42 rr_1qo6 1 . VAL 43 43 rr_1qo6 1 . THR 44 44 rr_1qo6 1 . GLN 45 45 rr_1qo6 1 . THR 46 46 rr_1qo6 1 . TYR 47 47 rr_1qo6 1 . GLY 48 48 rr_1qo6 1 . GLY 49 49 rr_1qo6 1 . ASN 50 50 rr_1qo6 1 . SER 51 51 rr_1qo6 1 . ASN 52 52 rr_1qo6 1 . GLY 53 53 rr_1qo6 1 . GLU 54 54 rr_1qo6 1 . PRO 55 55 rr_1qo6 1 . CYS 56 56 rr_1qo6 1 . VAL 57 57 rr_1qo6 1 . LEU 58 58 rr_1qo6 1 . PRO 59 59 rr_1qo6 1 . PHE 60 60 rr_1qo6 1 . THR 61 61 rr_1qo6 1 . TYR 62 62 rr_1qo6 1 . ASN 63 63 rr_1qo6 1 . GLY 64 64 rr_1qo6 1 . ARG 65 65 rr_1qo6 1 . THR 66 66 rr_1qo6 1 . PHE 67 67 rr_1qo6 1 . TYR 68 68 rr_1qo6 1 . SER 69 69 rr_1qo6 1 . CYS 70 70 rr_1qo6 1 . THR 71 71 rr_1qo6 1 . THR 72 72 rr_1qo6 1 . GLU 73 73 rr_1qo6 1 . GLY 74 74 rr_1qo6 1 . ARG 75 75 rr_1qo6 1 . GLN 76 76 rr_1qo6 1 . ASP 77 77 rr_1qo6 1 . GLY 78 78 rr_1qo6 1 . HIS 79 79 rr_1qo6 1 . LEU 80 80 rr_1qo6 1 . TRP 81 81 rr_1qo6 1 . CYS 82 82 rr_1qo6 1 . SER 83 83 rr_1qo6 1 . THR 84 84 rr_1qo6 1 . THR 85 85 rr_1qo6 1 . SER 86 86 rr_1qo6 1 . ASN 87 87 rr_1qo6 1 . TYR 88 88 rr_1qo6 1 . GLU 89 89 rr_1qo6 1 . GLN 90 90 rr_1qo6 1 . ASP 91 91 rr_1qo6 1 . GLN 92 92 rr_1qo6 1 . LYS 93 93 rr_1qo6 1 . TYR 94 94 rr_1qo6 1 . SER 95 95 rr_1qo6 1 . PHE 96 96 rr_1qo6 1 . CYS 97 97 rr_1qo6 1 . THR 98 98 rr_1qo6 1 . ASP 99 99 rr_1qo6 1 . HIS 100 100 rr_1qo6 1 . THR 101 101 rr_1qo6 1 stop_ save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_1qo6 _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 55 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_1qo6 _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 1qo6.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_1qo6 1 1 1qo6.mr . . "MR format" 2 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_1qo6 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_1qo6 _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER CELL ADHESION PROTEIN 03-NOV-99 1QO6 *TITLE SOLUTION STRUCTURE OF A PAIR OF MODULES FROM THE *TITLE 2 GELATIN-BINDING DOMAIN OF FIBRONECTIN *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: FIBRONECTIN; *COMPND 3 CHAIN: A; *COMPND 4 FRAGMENT: FIBRONECTIN TYPE-I AND FIBRONECTIN TYPE-II *COMPND 5 MODULE PAIR FROM COLLAGEN-BINDING DOMAIN; *COMPND 6 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 EXPRESSION_SYSTEM: PICHIA PASTORIS; *SOURCE 5 EXPRESSION_SYSTEM_STRAIN: GS115 *KEYWDS FIBRONECTIN MODULE PAIR, GELATIN-BINDING *EXPDTA NMR, 55 STRUCTURES *AUTHOR A.A.BOCQUIER,J.R.POTTS,A.R.PICKFORD,I.D.CAMPBELL ; save_