data_wwPDB_remediated_restraints_file_for_PDB_entry_2btb # This wwPDB archive file contains, for PDB entry 2btb: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, W Vranken, C Penkett, J Lin, CF Schulte, G Vuister, G Vriend, # JL Markley, EL Ulrich. BioMagResBank database `NMR Restraints Grid` with # curated sets of experimental NMR restraints for over 4,000 protein and nucleic # acid PDB entries. (in preparation) save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2btb _Entry.Title "wwPDB remediated NMR restraints for PDB entry 2btb" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 2btb" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2btb _Assembly.ID 1 _Assembly.Name 2btb _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "not present" _Assembly.Molecular_mass 1912.9615 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 "BAND 3 PEPTIDE" 1 $BAND_3_PEPTIDE A . no . . . . . . rr_2btb 1 stop_ save_ save_BAND_3_PEPTIDE _Entity.Sf_category entity _Entity.Sf_framecode BAND_3_PEPTIDE _Entity.Entry_ID rr_2btb _Entity.ID 1 _Entity.Name BAND_3_PEPTIDE _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_chirality yes _Entity.Nstd_linkage yes _Entity.Nonpolymer_comp_ID MET _Entity.Nonpolymer_comp_label $chem_comp_MET _Entity.Number_of_monomers 16 _Entity.Paramagnetic no _Entity.Thiol_state "not present" _Entity.Parent_entity_ID 1 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . rr_2btb 1 2 . GLU . rr_2btb 1 3 . GLU . rr_2btb 1 4 . LEU . rr_2btb 1 5 . GLN . rr_2btb 1 6 . ASP . rr_2btb 1 7 . ASP . rr_2btb 1 8 . TYR . rr_2btb 1 9 . GLU . rr_2btb 1 10 . ASP . rr_2btb 1 11 . MET . rr_2btb 1 12 . MET . rr_2btb 1 13 . GLU . rr_2btb 1 14 . GLU . rr_2btb 1 15 . ASN . rr_2btb 1 16 . NH2 . rr_2btb 1 stop_ save_ save_chem_comp_NH2 _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_NH2 _Chem_comp.Entry_ID rr_2btb _Chem_comp.ID NH2 _Chem_comp.Name "AMINO GROUP" _Chem_comp.Type non-polymer _Chem_comp.PDB_code NH2 _Chem_comp.Formal_charge 0 _Chem_comp.Paramagnetic no _Chem_comp.Aromatic no _Chem_comp.Formula "H2 N" _Chem_comp.Formula_weight 16.0225 save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2btb _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2btb _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2btb.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_2btb 1 1 2btb.mr . . n/a 2 comment "Not applicable" "Not applicable" 0 rr_2btb 1 1 2btb.mr . . "MR format" 3 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_2btb 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2btb _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER ANION EXCHANGE 13-NOV-95 2BTB *TITLE NMR STUDY OF N-TERMINAL HUMAN BAND 3 PEPTIDE, *TITLE 2 RESIDUES 1 - 15 *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: BAND 3 PEPTIDE; *COMPND 3 CHAIN: NULL; *COMPND 4 SYNONYM: B3P; *COMPND 5 ENGINEERED: YES; *COMPND 6 OTHER_DETAILS: C-TERMINAL AMIDATION, NON-ACETYLATED *COMPND 7 N-TERMINUS *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 CELL: ERYTHROCYTE *KEYWDS ANION EXCHANGE, PHOSPHORYLATION, LIPOPROTEIN *EXPDTA NMR, 20 STRUCTURES *AUTHOR M.L.SCHNEIDER,C.B.POST *REVDAT 1 10-JUN-96 2BTB 0 REMARK Band 3 Peptide (B3P) distance restraints in XPLOR format REMARK Distance restraints are for B3P when bound to aldolase set message=on echo=off end ; save_ save_MR_file_comment_2 _Org_constr_file_comment.Sf_framecode MR_file_comment_2 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2btb _Org_constr_file_comment.ID 2 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 2 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; {* Strong (1.8 - 2.7 Angstroms) *} assign (resid 2 and name HA)(resid 3 and name HN ) 2.4 0.6 0.3 {* Medium (1.8 - 3.3 Angstroms) *} assign (resid 3 and name HN)(resid 3 and name HA ) 2.8 1.0 0.5 assign (resid 3 and name HN)(resid 3 and name HG* ) 2.8 1.0 0.5 assign (resid 3 and name HN)(resid 3 and name HB1 ) 2.8 1.0 0.5 assign (resid 3 and name HN)(resid 3 and name HB2 ) 2.8 1.0 0.5 assign (resid 3 and name HA)(resid 4 and name HN ) 2.8 1.0 0.5 assign (resid 4 and name HN)(resid 4 and name HB* ) 2.8 1.0 0.5 assign (resid 5 and name HN)(resid 5 and name HB2 ) 2.8 1.0 0.5 assign (resid 5 and name HN)(resid 5 and name HB1 ) 2.8 1.0 0.5 assign (resid 5 and name HN)(resid 5 and name HE2* ) 2.8 1.0 0.5 assign (resid 5 and name HN)(resid 5 and name HG* ) 2.8 1.0 0.5 assign (resid 9 and name HN)(resid 9 and name HA ) 2.8 1.0 0.5 assign (resid 9 and name HA)(resid 10 and name HN ) 2.8 1.0 0.5 assign (resid 14 and name HN)(resid 14 and name HB2) 2.8 1.0 0.5 assign (resid 14 and name HN)(resid 14 and name HB1) 2.8 1.0 0.5 assign (resid 14 and name HN)(resid 14 and name HG*) 2.8 1.0 0.5 assign (resid 14 and name HA)(resid 15 and name HN ) 2.8 1.0 0.5 assign (resid 15 and name HA)(resid 15 and name HB2) 2.8 1.0 0.5 assign (resid 15 and name HA)(resid 15 and name HB1) 2.8 1.0 0.5 assign (resid 15 and name HN)(resid 15 and name HB2) 2.8 1.0 0.5 assign (resid 15 and name HN)(resid 15 and name HB1) 2.8 1.0 0.5 {* Weak (1.8 - 5.0 Angstroms) *} assign (resid 1 and name HA)(resid 1 and name HB2 ) 4.5 2.7 0.5 assign (resid 1 and name HA)(resid 1 and name HB1 ) 4.5 2.7 0.5 assign (resid 1 and name HA)(resid 1 and name HG2 ) 4.5 2.7 0.5 assign (resid 1 and name HA)(resid 1 and name HG1 ) 4.5 2.7 0.5 assign (resid 1 and name HA)(resid 2 and name HN ) 4.5 2.7 0.5 assign (resid 3 and name HN)(resid 4 and name HN ) 4.5 2.7 0.5 assign (resid 4 and name HA)(resid 4 and name HD2* ) 4.5 2.7 0.5 assign (resid 4 and name HA)(resid 4 and name HD1* ) 4.5 2.7 0.5 assign (resid 4 and name HN)(resid 4 and name HD2* ) 4.5 2.7 0.5 assign (resid 4 and name HN)(resid 4 and name HD1* ) 4.5 2.7 0.5 assign (resid 4 and name HD1*)(resid 8 and name HE*) 4.5 2.7 0.5 assign (resid 4 and name HD2*)(resid 8 and name HE*) 4.5 2.7 0.5 assign (resid 4 and name HD1*)(resid 8 and name HD*) 4.5 2.7 0.5 assign (resid 4 and name HD2*)(resid 8 and name HD*) 4.5 2.7 0.5 assign (resid 4 and name HD2*)(resid 8 and name HA ) 4.5 2.7 0.5 assign (resid 4 and name HD1*)(resid 8 and name HA ) 4.5 2.7 0.5 assign (resid 5 and name HA)(resid 6 and name HA ) 4.5 2.7 0.5 assign (resid 7 and name HN)(resid 7 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HD*)(resid 4 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HE*)(resid 4 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HA)(resid 8 and name HB* ) 4.5 2.7 0.5 assign (resid 8 and name HN)(resid 8 and name HD* ) 4.5 2.7 0.5 assign (resid 8 and name HA)(resid 8 and name HE* ) 4.5 2.7 0.5 assign (resid 8 and name HA)(resid 8 and name HD* ) 4.5 2.7 0.5 assign (resid 8 and name HN)(resid 8 and name HB* ) 4.5 2.7 0.5 assign (resid 8 and name HB*)(resid 8 and name HE* ) 4.5 2.7 0.5 assign (resid 8 and name HB*)(resid 8 and name HD* ) 4.5 2.7 0.5 assign (resid 8 and name HN)(resid 9 and name HN ) 4.5 2.7 0.5 assign (resid 8 and name HA)(resid 9 and name HN ) 4.5 2.7 0.5 assign (resid 8 and name HN)(resid 9 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HD*)(resid 9 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HE*)(resid 9 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HD*)(resid 10 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HE*)(resid 10 and name HA ) 4.5 2.7 0.5 assign (resid 8 and name HD*)(resid 12 and name HG*) 4.5 2.7 0.5 assign (resid 8 and name HE*)(resid 12 and name HG*) 4.5 2.7 0.5 assign (resid 8 and name HB*)(resid 12 and name HE*) 4.5 2.7 0.5 assign (resid 8 and name HD*)(resid 12 and name HE*) 4.5 2.7 0.5 assign (resid 8 and name HE*)(resid 12 and name HE*) 4.5 2.7 0.5 assign (resid 9 and name HN)(resid 9 and name HG* ) 4.5 2.7 0.5 assign (resid 10 and name HN)(resid 10 and name HA ) 4.5 2.7 0.5 assign (resid 10 and name HA)(resid 13 and name HA ) 4.5 2.7 0.5 assign (resid 14 and name HA)(resid 15 and name HA ) 4.5 2.7 0.5 assign (resid 13 and name HN)(resid 14 and name HN ) 4.5 2.7 0.5 assign (resid 15 and name H1)(resid 15 and name HB*) 4.5 2.7 0.5 assign (resid 15 and name H2)(resid 15 and name HB*) 4.5 2.7 0.5 set message=on echo=on end ; save_