data_wwPDB_remediated_restraints_file_for_PDB_entry_2kje # This wwPDB archive file contains, for PDB entry 2kje: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389–396. save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2kje _Entry.Title "wwPDB remediated NMR restraints for PDB entry 2kje" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 2kje" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2kje _Assembly.ID 1 _Assembly.Name 2kje _Assembly.Number_of_components 5 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 3 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "all free" _Assembly.Molecular_mass 15161.4802 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 "CREB binding protein" 1 $CREB_binding_protein A . no . . . . . . rr_2kje 1 2 "Early E1A 32 kDa protein" 3 $Early_E1A_32_kDa_protein B . no . . . . . . rr_2kje 1 3 "ZINC ION" 2 $ZINC_ION C . no . . . . . . rr_2kje 1 4 "ZINC ION" 2 $ZINC_ION D . no . . . . . . rr_2kje 1 5 "ZINC ION" 2 $ZINC_ION E . no . . . . . . rr_2kje 1 stop_ save_ save_CREB_binding_protein _Entity.Sf_category entity _Entity.Sf_framecode CREB_binding_protein _Entity.Entry_ID rr_2kje _Entity.ID 1 _Entity.Name CREB_binding_protein _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; SPQESRRLSIQRCIQSLVHA CQCRNANCSLPSCQKMKRVV QHTKGCKRKTNGGCPVCKQL IALCCYHAKHCQENKCPVPF CLNIKHKLRQQQ ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 92 _Entity.Paramagnetic no _Entity.Thiol_state "all free" _Entity.Parent_entity_ID 1 _Entity.Formula_weight 10510.4717 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . SER . rr_2kje 1 2 . PRO . rr_2kje 1 3 . GLN . rr_2kje 1 4 . GLU . rr_2kje 1 5 . SER . rr_2kje 1 6 . ARG . rr_2kje 1 7 . ARG . rr_2kje 1 8 . LEU . rr_2kje 1 9 . SER . rr_2kje 1 10 . ILE . rr_2kje 1 11 . GLN . rr_2kje 1 12 . ARG . rr_2kje 1 13 . CYS . rr_2kje 1 14 . ILE . rr_2kje 1 15 . GLN . rr_2kje 1 16 . SER . rr_2kje 1 17 . LEU . rr_2kje 1 18 . VAL . rr_2kje 1 19 . HIS . rr_2kje 1 20 . ALA . rr_2kje 1 21 . CYS . rr_2kje 1 22 . GLN . rr_2kje 1 23 . CYS . rr_2kje 1 24 . ARG . rr_2kje 1 25 . ASN . rr_2kje 1 26 . ALA . rr_2kje 1 27 . ASN . rr_2kje 1 28 . CYS . rr_2kje 1 29 . SER . rr_2kje 1 30 . LEU . rr_2kje 1 31 . PRO . rr_2kje 1 32 . SER . rr_2kje 1 33 . CYS . rr_2kje 1 34 . GLN . rr_2kje 1 35 . LYS . rr_2kje 1 36 . MET . rr_2kje 1 37 . LYS . rr_2kje 1 38 . ARG . rr_2kje 1 39 . VAL . rr_2kje 1 40 . VAL . rr_2kje 1 41 . GLN . rr_2kje 1 42 . HIS . rr_2kje 1 43 . THR . rr_2kje 1 44 . LYS . rr_2kje 1 45 . GLY . rr_2kje 1 46 . CYS . rr_2kje 1 47 . LYS . rr_2kje 1 48 . ARG . rr_2kje 1 49 . LYS . rr_2kje 1 50 . THR . rr_2kje 1 51 . ASN . rr_2kje 1 52 . GLY . rr_2kje 1 53 . GLY . rr_2kje 1 54 . CYS . rr_2kje 1 55 . PRO . rr_2kje 1 56 . VAL . rr_2kje 1 57 . CYS . rr_2kje 1 58 . LYS . rr_2kje 1 59 . GLN . rr_2kje 1 60 . LEU . rr_2kje 1 61 . ILE . rr_2kje 1 62 . ALA . rr_2kje 1 63 . LEU . rr_2kje 1 64 . CYS . rr_2kje 1 65 . CYS . rr_2kje 1 66 . TYR . rr_2kje 1 67 . HIS . rr_2kje 1 68 . ALA . rr_2kje 1 69 . LYS . rr_2kje 1 70 . HIS . rr_2kje 1 71 . CYS . rr_2kje 1 72 . GLN . rr_2kje 1 73 . GLU . rr_2kje 1 74 . ASN . rr_2kje 1 75 . LYS . rr_2kje 1 76 . CYS . rr_2kje 1 77 . PRO . rr_2kje 1 78 . VAL . rr_2kje 1 79 . PRO . rr_2kje 1 80 . PHE . rr_2kje 1 81 . CYS . rr_2kje 1 82 . LEU . rr_2kje 1 83 . ASN . rr_2kje 1 84 . ILE . rr_2kje 1 85 . LYS . rr_2kje 1 86 . HIS . rr_2kje 1 87 . LYS . rr_2kje 1 88 . LEU . rr_2kje 1 89 . ARG . rr_2kje 1 90 . GLN . rr_2kje 1 91 . GLN . rr_2kje 1 92 . GLN . rr_2kje 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . SER 1 1 rr_2kje 1 . PRO 2 2 rr_2kje 1 . GLN 3 3 rr_2kje 1 . GLU 4 4 rr_2kje 1 . SER 5 5 rr_2kje 1 . ARG 6 6 rr_2kje 1 . ARG 7 7 rr_2kje 1 . LEU 8 8 rr_2kje 1 . SER 9 9 rr_2kje 1 . ILE 10 10 rr_2kje 1 . GLN 11 11 rr_2kje 1 . ARG 12 12 rr_2kje 1 . CYS 13 13 rr_2kje 1 . ILE 14 14 rr_2kje 1 . GLN 15 15 rr_2kje 1 . SER 16 16 rr_2kje 1 . LEU 17 17 rr_2kje 1 . VAL 18 18 rr_2kje 1 . HIS 19 19 rr_2kje 1 . ALA 20 20 rr_2kje 1 . CYS 21 21 rr_2kje 1 . GLN 22 22 rr_2kje 1 . CYS 23 23 rr_2kje 1 . ARG 24 24 rr_2kje 1 . ASN 25 25 rr_2kje 1 . ALA 26 26 rr_2kje 1 . ASN 27 27 rr_2kje 1 . CYS 28 28 rr_2kje 1 . SER 29 29 rr_2kje 1 . LEU 30 30 rr_2kje 1 . PRO 31 31 rr_2kje 1 . SER 32 32 rr_2kje 1 . CYS 33 33 rr_2kje 1 . GLN 34 34 rr_2kje 1 . LYS 35 35 rr_2kje 1 . MET 36 36 rr_2kje 1 . LYS 37 37 rr_2kje 1 . ARG 38 38 rr_2kje 1 . VAL 39 39 rr_2kje 1 . VAL 40 40 rr_2kje 1 . GLN 41 41 rr_2kje 1 . HIS 42 42 rr_2kje 1 . THR 43 43 rr_2kje 1 . LYS 44 44 rr_2kje 1 . GLY 45 45 rr_2kje 1 . CYS 46 46 rr_2kje 1 . LYS 47 47 rr_2kje 1 . ARG 48 48 rr_2kje 1 . LYS 49 49 rr_2kje 1 . THR 50 50 rr_2kje 1 . ASN 51 51 rr_2kje 1 . GLY 52 52 rr_2kje 1 . GLY 53 53 rr_2kje 1 . CYS 54 54 rr_2kje 1 . PRO 55 55 rr_2kje 1 . VAL 56 56 rr_2kje 1 . CYS 57 57 rr_2kje 1 . LYS 58 58 rr_2kje 1 . GLN 59 59 rr_2kje 1 . LEU 60 60 rr_2kje 1 . ILE 61 61 rr_2kje 1 . ALA 62 62 rr_2kje 1 . LEU 63 63 rr_2kje 1 . CYS 64 64 rr_2kje 1 . CYS 65 65 rr_2kje 1 . TYR 66 66 rr_2kje 1 . HIS 67 67 rr_2kje 1 . ALA 68 68 rr_2kje 1 . LYS 69 69 rr_2kje 1 . HIS 70 70 rr_2kje 1 . CYS 71 71 rr_2kje 1 . GLN 72 72 rr_2kje 1 . GLU 73 73 rr_2kje 1 . ASN 74 74 rr_2kje 1 . LYS 75 75 rr_2kje 1 . CYS 76 76 rr_2kje 1 . PRO 77 77 rr_2kje 1 . VAL 78 78 rr_2kje 1 . PRO 79 79 rr_2kje 1 . PHE 80 80 rr_2kje 1 . CYS 81 81 rr_2kje 1 . LEU 82 82 rr_2kje 1 . ASN 83 83 rr_2kje 1 . ILE 84 84 rr_2kje 1 . LYS 85 85 rr_2kje 1 . HIS 86 86 rr_2kje 1 . LYS 87 87 rr_2kje 1 . LEU 88 88 rr_2kje 1 . ARG 89 89 rr_2kje 1 . GLN 90 90 rr_2kje 1 . GLN 91 91 rr_2kje 1 . GLN 92 92 rr_2kje 1 stop_ save_ save_ZINC_ION _Entity.Sf_category entity _Entity.Sf_framecode ZINC_ION _Entity.Entry_ID rr_2kje _Entity.ID 2 _Entity.Name ZINC_ION _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_chirality yes _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID ZN _Entity.Nonpolymer_comp_label $chem_comp_ZN _Entity.Number_of_monomers 1 _Entity.Paramagnetic no _Entity.Thiol_state "not present" _Entity.Parent_entity_ID 2 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . ZN . rr_2kje 2 stop_ save_ save_Early_E1A_32_kDa_protein _Entity.Sf_category entity _Entity.Sf_framecode Early_E1A_32_kDa_protein _Entity.Entry_ID rr_2kje _Entity.ID 3 _Entity.Name Early_E1A_32_kDa_protein _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID B _Entity.Polymer_seq_one_letter_code ; SHMAPEDPNEEAVSQIFPDS VMLAVQEGIDLLTFPPAPGS PE ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 42 _Entity.Paramagnetic no _Entity.Thiol_state "not present" _Entity.Parent_entity_ID 3 _Entity.Formula_weight 4454.8685 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . SER . rr_2kje 3 2 . HIS . rr_2kje 3 3 . MET . rr_2kje 3 4 . ALA . rr_2kje 3 5 . PRO . rr_2kje 3 6 . GLU . rr_2kje 3 7 . ASP . rr_2kje 3 8 . PRO . rr_2kje 3 9 . ASN . rr_2kje 3 10 . GLU . rr_2kje 3 11 . GLU . rr_2kje 3 12 . ALA . rr_2kje 3 13 . VAL . rr_2kje 3 14 . SER . rr_2kje 3 15 . GLN . rr_2kje 3 16 . ILE . rr_2kje 3 17 . PHE . rr_2kje 3 18 . PRO . rr_2kje 3 19 . ASP . rr_2kje 3 20 . SER . rr_2kje 3 21 . VAL . rr_2kje 3 22 . MET . rr_2kje 3 23 . LEU . rr_2kje 3 24 . ALA . rr_2kje 3 25 . VAL . rr_2kje 3 26 . GLN . rr_2kje 3 27 . GLU . rr_2kje 3 28 . GLY . rr_2kje 3 29 . ILE . rr_2kje 3 30 . ASP . rr_2kje 3 31 . LEU . rr_2kje 3 32 . LEU . rr_2kje 3 33 . THR . rr_2kje 3 34 . PHE . rr_2kje 3 35 . PRO . rr_2kje 3 36 . PRO . rr_2kje 3 37 . ALA . rr_2kje 3 38 . PRO . rr_2kje 3 39 . GLY . rr_2kje 3 40 . SER . rr_2kje 3 41 . PRO . rr_2kje 3 42 . GLU . rr_2kje 3 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . SER 1 1 rr_2kje 3 . HIS 2 2 rr_2kje 3 . MET 3 3 rr_2kje 3 . ALA 4 4 rr_2kje 3 . PRO 5 5 rr_2kje 3 . GLU 6 6 rr_2kje 3 . ASP 7 7 rr_2kje 3 . PRO 8 8 rr_2kje 3 . ASN 9 9 rr_2kje 3 . GLU 10 10 rr_2kje 3 . GLU 11 11 rr_2kje 3 . ALA 12 12 rr_2kje 3 . VAL 13 13 rr_2kje 3 . SER 14 14 rr_2kje 3 . GLN 15 15 rr_2kje 3 . ILE 16 16 rr_2kje 3 . PHE 17 17 rr_2kje 3 . PRO 18 18 rr_2kje 3 . ASP 19 19 rr_2kje 3 . SER 20 20 rr_2kje 3 . VAL 21 21 rr_2kje 3 . MET 22 22 rr_2kje 3 . LEU 23 23 rr_2kje 3 . ALA 24 24 rr_2kje 3 . VAL 25 25 rr_2kje 3 . GLN 26 26 rr_2kje 3 . GLU 27 27 rr_2kje 3 . GLY 28 28 rr_2kje 3 . ILE 29 29 rr_2kje 3 . ASP 30 30 rr_2kje 3 . LEU 31 31 rr_2kje 3 . LEU 32 32 rr_2kje 3 . THR 33 33 rr_2kje 3 . PHE 34 34 rr_2kje 3 . PRO 35 35 rr_2kje 3 . PRO 36 36 rr_2kje 3 . ALA 37 37 rr_2kje 3 . PRO 38 38 rr_2kje 3 . GLY 39 39 rr_2kje 3 . SER 40 40 rr_2kje 3 . PRO 41 41 rr_2kje 3 . GLU 42 42 rr_2kje 3 stop_ save_ save_chem_comp_ZN _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_ZN _Chem_comp.Entry_ID rr_2kje _Chem_comp.ID ZN _Chem_comp.Name "ZINC ION" _Chem_comp.Type non-polymer _Chem_comp.PDB_code ZN _Chem_comp.Formal_charge 2 _Chem_comp.Paramagnetic no _Chem_comp.Aromatic no _Chem_comp.Formula Zn _Chem_comp.Formula_weight 65.38 save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2kje _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2kje _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2kje.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_2kje 1 1 2kje.mr . . AMBER 2 distance NOE simple 0 rr_2kje 1 1 2kje.mr . . AMBER 3 stereochemistry chirality "Not applicable" 0 rr_2kje 1 1 2kje.mr . . AMBER 4 "dihedral angle" "Not applicable" "Not applicable" 0 rr_2kje 1 1 2kje.mr . . "MR format" 5 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_2kje 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2kje _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER TRANSCRIPTION 27-MAY-09 2KJE *TITLE NMR STRUCTURE OF CBP TAZ2 AND ADENOVIRAL E1A COMPLEX *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: CREB-BINDING PROTEIN; *COMPND 3 CHAIN: A; *COMPND 4 FRAGMENT: UNP RESIDUES 1763-1854; *COMPND 5 EC: 2.3.1.48; *COMPND 6 ENGINEERED: YES; *COMPND 7 MOL_ID: 2; *COMPND 8 MOLECULE: EARLY E1A 32 KDA PROTEIN; *COMPND 9 CHAIN: B; *COMPND 10 FRAGMENT: UNP RESIDUES 53-91; *COMPND 11 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 ORGANISM_TAXID: 9606; *SOURCE 5 GENE: CREBBP, CBP; *SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; *SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21A; *SOURCE 10 MOL_ID: 2; *SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN ADENOVIRUS 5; *SOURCE 12 ORGANISM_COMMON: ADENOVIRUS; *SOURCE 13 ORGANISM_TAXID: 28285; *SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; *SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PET21A *KEYWDS CBP, TAZ2, E1A, ADENOVIRAL, ACETYLATION, ACTIVATOR, *KEYWDS 2 BROMODOMAIN, CHROMOSOMAL REARRANGEMENT, DISEASE MUTATION, *KEYWDS 3 HOST-VIRUS INTERACTION, ISOPEPTIDE BOND, METAL-BINDING, *KEYWDS 4 METHYLATION, NUCLEUS, PHOSPHOPROTEIN, TRANSCRIPTION, *KEYWDS 5 TRANSCRIPTION REGULATION, TRANSFERASE, UBL CONJUGATION, *KEYWDS 6 ZINC, ZINC-FINGER, ALTERNATIVE SPLICING, DNA-BINDING, EARLY *KEYWDS 7 PROTEIN, ONCOGENE *EXPDTA SOLUTION NMR *NUMMDL 20 *AUTHOR J.C.FERREON, M.MARTINEZ-YAMOUT, H.DYSON, P.E.WRIGHT *REVDAT 1 15-SEP-09 2KJE 0 ; save_