data_wwPDB_remediated_restraints_file_for_PDB_entry_2kk6 # This wwPDB archive file contains, for PDB entry 2kk6: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389–396. save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2kk6 _Entry.Title "wwPDB remediated NMR restraints for PDB entry 2kk6" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 2kk6" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2kk6 _Assembly.ID 1 _Assembly.Name 2kk6 _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "not present" _Assembly.Molecular_mass 13633.6161 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 "Proto oncogene tyrosine protein kinase FER" 1 $Proto_oncogene_tyrosine_protein_kinase_FER A . no . . . . . . rr_2kk6 1 stop_ save_ save_Proto_oncogene_tyrosine_protein_kinase_FER _Entity.Sf_category entity _Entity.Sf_framecode Proto_oncogene_tyrosine_protein_kinase_FER _Entity.Entry_ID rr_2kk6 _Entity.ID 1 _Entity.Name Proto_oncogene_tyrosine_protein_kinase_FER _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; MGHHHHHHSHMKPLAEQDWY HGAIPRIEAQELLKKQGDFL VRESHGKPGEYVLSVYSDGQ RRHFIIQYVDNMYRFEGTGF SNIPQLIDHHYTTKQVITKK SGVVLLNPIPKDKKWI ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 116 _Entity.Paramagnetic no _Entity.Thiol_state "not present" _Entity.Parent_entity_ID 1 _Entity.Formula_weight 13633.6161 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . rr_2kk6 1 2 . GLY . rr_2kk6 1 3 . HIS . rr_2kk6 1 4 . HIS . rr_2kk6 1 5 . HIS . rr_2kk6 1 6 . HIS . rr_2kk6 1 7 . HIS . rr_2kk6 1 8 . HIS . rr_2kk6 1 9 . SER . rr_2kk6 1 10 . HIS . rr_2kk6 1 11 . MET . rr_2kk6 1 12 . LYS . rr_2kk6 1 13 . PRO . rr_2kk6 1 14 . LEU . rr_2kk6 1 15 . ALA . rr_2kk6 1 16 . GLU . rr_2kk6 1 17 . GLN . rr_2kk6 1 18 . ASP . rr_2kk6 1 19 . TRP . rr_2kk6 1 20 . TYR . rr_2kk6 1 21 . HIS . rr_2kk6 1 22 . GLY . rr_2kk6 1 23 . ALA . rr_2kk6 1 24 . ILE . rr_2kk6 1 25 . PRO . rr_2kk6 1 26 . ARG . rr_2kk6 1 27 . ILE . rr_2kk6 1 28 . GLU . rr_2kk6 1 29 . ALA . rr_2kk6 1 30 . GLN . rr_2kk6 1 31 . GLU . rr_2kk6 1 32 . LEU . rr_2kk6 1 33 . LEU . rr_2kk6 1 34 . LYS . rr_2kk6 1 35 . LYS . rr_2kk6 1 36 . GLN . rr_2kk6 1 37 . GLY . rr_2kk6 1 38 . ASP . rr_2kk6 1 39 . PHE . rr_2kk6 1 40 . LEU . rr_2kk6 1 41 . VAL . rr_2kk6 1 42 . ARG . rr_2kk6 1 43 . GLU . rr_2kk6 1 44 . SER . rr_2kk6 1 45 . HIS . rr_2kk6 1 46 . GLY . rr_2kk6 1 47 . LYS . rr_2kk6 1 48 . PRO . rr_2kk6 1 49 . GLY . rr_2kk6 1 50 . GLU . rr_2kk6 1 51 . TYR . rr_2kk6 1 52 . VAL . rr_2kk6 1 53 . LEU . rr_2kk6 1 54 . SER . rr_2kk6 1 55 . VAL . rr_2kk6 1 56 . TYR . rr_2kk6 1 57 . SER . rr_2kk6 1 58 . ASP . rr_2kk6 1 59 . GLY . rr_2kk6 1 60 . GLN . rr_2kk6 1 61 . ARG . rr_2kk6 1 62 . ARG . rr_2kk6 1 63 . HIS . rr_2kk6 1 64 . PHE . rr_2kk6 1 65 . ILE . rr_2kk6 1 66 . ILE . rr_2kk6 1 67 . GLN . rr_2kk6 1 68 . TYR . rr_2kk6 1 69 . VAL . rr_2kk6 1 70 . ASP . rr_2kk6 1 71 . ASN . rr_2kk6 1 72 . MET . rr_2kk6 1 73 . TYR . rr_2kk6 1 74 . ARG . rr_2kk6 1 75 . PHE . rr_2kk6 1 76 . GLU . rr_2kk6 1 77 . GLY . rr_2kk6 1 78 . THR . rr_2kk6 1 79 . GLY . rr_2kk6 1 80 . PHE . rr_2kk6 1 81 . SER . rr_2kk6 1 82 . ASN . rr_2kk6 1 83 . ILE . rr_2kk6 1 84 . PRO . rr_2kk6 1 85 . GLN . rr_2kk6 1 86 . LEU . rr_2kk6 1 87 . ILE . rr_2kk6 1 88 . ASP . rr_2kk6 1 89 . HIS . rr_2kk6 1 90 . HIS . rr_2kk6 1 91 . TYR . rr_2kk6 1 92 . THR . rr_2kk6 1 93 . THR . rr_2kk6 1 94 . LYS . rr_2kk6 1 95 . GLN . rr_2kk6 1 96 . VAL . rr_2kk6 1 97 . ILE . rr_2kk6 1 98 . THR . rr_2kk6 1 99 . LYS . rr_2kk6 1 100 . LYS . rr_2kk6 1 101 . SER . rr_2kk6 1 102 . GLY . rr_2kk6 1 103 . VAL . rr_2kk6 1 104 . VAL . rr_2kk6 1 105 . LEU . rr_2kk6 1 106 . LEU . rr_2kk6 1 107 . ASN . rr_2kk6 1 108 . PRO . rr_2kk6 1 109 . ILE . rr_2kk6 1 110 . PRO . rr_2kk6 1 111 . LYS . rr_2kk6 1 112 . ASP . rr_2kk6 1 113 . LYS . rr_2kk6 1 114 . LYS . rr_2kk6 1 115 . TRP . rr_2kk6 1 116 . ILE . rr_2kk6 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 rr_2kk6 1 . GLY 2 2 rr_2kk6 1 . HIS 3 3 rr_2kk6 1 . HIS 4 4 rr_2kk6 1 . HIS 5 5 rr_2kk6 1 . HIS 6 6 rr_2kk6 1 . HIS 7 7 rr_2kk6 1 . HIS 8 8 rr_2kk6 1 . SER 9 9 rr_2kk6 1 . HIS 10 10 rr_2kk6 1 . MET 11 11 rr_2kk6 1 . LYS 12 12 rr_2kk6 1 . PRO 13 13 rr_2kk6 1 . LEU 14 14 rr_2kk6 1 . ALA 15 15 rr_2kk6 1 . GLU 16 16 rr_2kk6 1 . GLN 17 17 rr_2kk6 1 . ASP 18 18 rr_2kk6 1 . TRP 19 19 rr_2kk6 1 . TYR 20 20 rr_2kk6 1 . HIS 21 21 rr_2kk6 1 . GLY 22 22 rr_2kk6 1 . ALA 23 23 rr_2kk6 1 . ILE 24 24 rr_2kk6 1 . PRO 25 25 rr_2kk6 1 . ARG 26 26 rr_2kk6 1 . ILE 27 27 rr_2kk6 1 . GLU 28 28 rr_2kk6 1 . ALA 29 29 rr_2kk6 1 . GLN 30 30 rr_2kk6 1 . GLU 31 31 rr_2kk6 1 . LEU 32 32 rr_2kk6 1 . LEU 33 33 rr_2kk6 1 . LYS 34 34 rr_2kk6 1 . LYS 35 35 rr_2kk6 1 . GLN 36 36 rr_2kk6 1 . GLY 37 37 rr_2kk6 1 . ASP 38 38 rr_2kk6 1 . PHE 39 39 rr_2kk6 1 . LEU 40 40 rr_2kk6 1 . VAL 41 41 rr_2kk6 1 . ARG 42 42 rr_2kk6 1 . GLU 43 43 rr_2kk6 1 . SER 44 44 rr_2kk6 1 . HIS 45 45 rr_2kk6 1 . GLY 46 46 rr_2kk6 1 . LYS 47 47 rr_2kk6 1 . PRO 48 48 rr_2kk6 1 . GLY 49 49 rr_2kk6 1 . GLU 50 50 rr_2kk6 1 . TYR 51 51 rr_2kk6 1 . VAL 52 52 rr_2kk6 1 . LEU 53 53 rr_2kk6 1 . SER 54 54 rr_2kk6 1 . VAL 55 55 rr_2kk6 1 . TYR 56 56 rr_2kk6 1 . SER 57 57 rr_2kk6 1 . ASP 58 58 rr_2kk6 1 . GLY 59 59 rr_2kk6 1 . GLN 60 60 rr_2kk6 1 . ARG 61 61 rr_2kk6 1 . ARG 62 62 rr_2kk6 1 . HIS 63 63 rr_2kk6 1 . PHE 64 64 rr_2kk6 1 . ILE 65 65 rr_2kk6 1 . ILE 66 66 rr_2kk6 1 . GLN 67 67 rr_2kk6 1 . TYR 68 68 rr_2kk6 1 . VAL 69 69 rr_2kk6 1 . ASP 70 70 rr_2kk6 1 . ASN 71 71 rr_2kk6 1 . MET 72 72 rr_2kk6 1 . TYR 73 73 rr_2kk6 1 . ARG 74 74 rr_2kk6 1 . PHE 75 75 rr_2kk6 1 . GLU 76 76 rr_2kk6 1 . GLY 77 77 rr_2kk6 1 . THR 78 78 rr_2kk6 1 . GLY 79 79 rr_2kk6 1 . PHE 80 80 rr_2kk6 1 . SER 81 81 rr_2kk6 1 . ASN 82 82 rr_2kk6 1 . ILE 83 83 rr_2kk6 1 . PRO 84 84 rr_2kk6 1 . GLN 85 85 rr_2kk6 1 . LEU 86 86 rr_2kk6 1 . ILE 87 87 rr_2kk6 1 . ASP 88 88 rr_2kk6 1 . HIS 89 89 rr_2kk6 1 . HIS 90 90 rr_2kk6 1 . TYR 91 91 rr_2kk6 1 . THR 92 92 rr_2kk6 1 . THR 93 93 rr_2kk6 1 . LYS 94 94 rr_2kk6 1 . GLN 95 95 rr_2kk6 1 . VAL 96 96 rr_2kk6 1 . ILE 97 97 rr_2kk6 1 . THR 98 98 rr_2kk6 1 . LYS 99 99 rr_2kk6 1 . LYS 100 100 rr_2kk6 1 . SER 101 101 rr_2kk6 1 . GLY 102 102 rr_2kk6 1 . VAL 103 103 rr_2kk6 1 . VAL 104 104 rr_2kk6 1 . LEU 105 105 rr_2kk6 1 . LEU 106 106 rr_2kk6 1 . ASN 107 107 rr_2kk6 1 . PRO 108 108 rr_2kk6 1 . ILE 109 109 rr_2kk6 1 . PRO 110 110 rr_2kk6 1 . LYS 111 111 rr_2kk6 1 . ASP 112 112 rr_2kk6 1 . LYS 113 113 rr_2kk6 1 . LYS 114 114 rr_2kk6 1 . TRP 115 115 rr_2kk6 1 . ILE 116 116 rr_2kk6 1 stop_ save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2kk6 _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2kk6 _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2kk6.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_2kk6 1 1 2kk6.mr . . XEASY 2 peak "Not applicable" "Not applicable" 0 rr_2kk6 1 1 2kk6.mr . . SPARKY 3 peak "Not applicable" "Not applicable" 0 rr_2kk6 1 1 2kk6.mr . . "MR format" 4 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_2kk6 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2kk6 _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER TRANSFERASE 15-JUN-09 2KK6 *TITLE SOLUTION STRUCTURE OF SH2 DOMAIN OF PROTO-ONCOGENE TYROSINE- *TITLE 2 PROTEIN KINASE FER FROM HOMO SAPIENS, NORTHEAST STRUCTURAL *TITLE 3 GENOMICS CONSORTIUM (NESG) TARGET HR3461D *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FER; *COMPND 3 CHAIN: A; *COMPND 4 FRAGMENT: SH2 DOMAIN; *COMPND 5 SYNONYM: C-FER, P94-FER, TYROSINE KINASE 3; *COMPND 6 EC: 2.7.10.2; *COMPND 7 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 ORGANISM_TAXID: 9606; *SOURCE 5 GENE: FER, TYK3; *SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET 14-15C *KEYWDS METHODS DEVELOPMENT, SH2, PROTO-ONCOGENE TYROSINE-PROTEIN *KEYWDS 2 KINASE FER, NESG, NMR, ATP-BINDING, CYTOPLASM, KINASE, *KEYWDS 3 NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, *KEYWDS 4 PROTO-ONCOGENE, SH2 DOMAIN, TRANSFERASE, TYROSINE-PROTEIN *KEYWDS 5 KINASE, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE *KEYWDS 6 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM *EXPDTA SOLUTION NMR *NUMMDL 20 *AUTHOR Y.TANG, D.WANG, C.NWOSU, L.OWENS, R.XIAO, J.LIU, M.C.BARAN, *AUTHOR 2 G.SWAPNA, T.B.ACTON, B.ROST, G.T.MONTELIONE, NORTHEAST *AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) *REVDAT 1 11-AUG-09 2KK6 0 ; save_