data_wwPDB_remediated_restraints_file_for_PDB_entry_2lvp # This wwPDB archive file contains, for PDB entry 2lvp: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389-396. ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2lvp _Entry.Title 'wwPDB remediated NMR restraints for PDB entry 2lvp' _Entry.Version_type original _Entry.NMR_STAR_version 3.1.0.8 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details 'Contains the remediated restraint lists and coordinates for PDB entry 2lvp' _Entry.PDB_coordinate_file_version 3.20 loop_ _Related_entries.Database_name _Related_entries.Database_accession_code _Related_entries.Relationship _Related_entries.Entry_ID PDB 2lvp 'Master copy' rr_2lvp stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2lvp _Assembly.ID 1 _Assembly.Name 2lvp _Assembly.Number_of_components 3 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state 'not present' _Assembly.Molecular_mass 23089.3917 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 Ubiquitin 1 $Ubiquitin A . no . . . . . . rr_2lvp 1 2 Ubiquitin 1 $Ubiquitin B . no . . . . . . rr_2lvp 1 3 'E3 ubiquitin protein ligase AMFR' 2 $E3_ubiquitin_protein_ligase_AMFR C . no . . . . . . rr_2lvp 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_Ubiquitin _Entity.Sf_category entity _Entity.Sf_framecode Ubiquitin _Entity.Entry_ID rr_2lvp _Entity.ID 1 _Entity.Name Ubiquitin _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A,B _Entity.Polymer_seq_one_letter_code ; MQIFVKTLTGKTITLEVEPS DTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYN IQKESTLHLVLRLRGG ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 76 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Parent_entity_ID 1 _Entity.Formula_weight 8564.8198 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . MET . rr_2lvp 1 2 . GLN . rr_2lvp 1 3 . ILE . rr_2lvp 1 4 . PHE . rr_2lvp 1 5 . VAL . rr_2lvp 1 6 . LYS . rr_2lvp 1 7 . THR . rr_2lvp 1 8 . LEU . rr_2lvp 1 9 . THR . rr_2lvp 1 10 . GLY . rr_2lvp 1 11 . LYS . rr_2lvp 1 12 . THR . rr_2lvp 1 13 . ILE . rr_2lvp 1 14 . THR . rr_2lvp 1 15 . LEU . rr_2lvp 1 16 . GLU . rr_2lvp 1 17 . VAL . rr_2lvp 1 18 . GLU . rr_2lvp 1 19 . PRO . rr_2lvp 1 20 . SER . rr_2lvp 1 21 . ASP . rr_2lvp 1 22 . THR . rr_2lvp 1 23 . ILE . rr_2lvp 1 24 . GLU . rr_2lvp 1 25 . ASN . rr_2lvp 1 26 . VAL . rr_2lvp 1 27 . LYS . rr_2lvp 1 28 . ALA . rr_2lvp 1 29 . LYS . rr_2lvp 1 30 . ILE . rr_2lvp 1 31 . GLN . rr_2lvp 1 32 . ASP . rr_2lvp 1 33 . LYS . rr_2lvp 1 34 . GLU . rr_2lvp 1 35 . GLY . rr_2lvp 1 36 . ILE . rr_2lvp 1 37 . PRO . rr_2lvp 1 38 . PRO . rr_2lvp 1 39 . ASP . rr_2lvp 1 40 . GLN . rr_2lvp 1 41 . GLN . rr_2lvp 1 42 . ARG . rr_2lvp 1 43 . LEU . rr_2lvp 1 44 . ILE . rr_2lvp 1 45 . PHE . rr_2lvp 1 46 . ALA . rr_2lvp 1 47 . GLY . rr_2lvp 1 48 . LYS . rr_2lvp 1 49 . GLN . rr_2lvp 1 50 . LEU . rr_2lvp 1 51 . GLU . rr_2lvp 1 52 . ASP . rr_2lvp 1 53 . GLY . rr_2lvp 1 54 . ARG . rr_2lvp 1 55 . THR . rr_2lvp 1 56 . LEU . rr_2lvp 1 57 . SER . rr_2lvp 1 58 . ASP . rr_2lvp 1 59 . TYR . rr_2lvp 1 60 . ASN . rr_2lvp 1 61 . ILE . rr_2lvp 1 62 . GLN . rr_2lvp 1 63 . LYS . rr_2lvp 1 64 . GLU . rr_2lvp 1 65 . SER . rr_2lvp 1 66 . THR . rr_2lvp 1 67 . LEU . rr_2lvp 1 68 . HIS . rr_2lvp 1 69 . LEU . rr_2lvp 1 70 . VAL . rr_2lvp 1 71 . LEU . rr_2lvp 1 72 . ARG . rr_2lvp 1 73 . LEU . rr_2lvp 1 74 . ARG . rr_2lvp 1 75 . GLY . rr_2lvp 1 76 . GLY . rr_2lvp 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . MET 1 1 rr_2lvp 1 . GLN 2 2 rr_2lvp 1 . ILE 3 3 rr_2lvp 1 . PHE 4 4 rr_2lvp 1 . VAL 5 5 rr_2lvp 1 . LYS 6 6 rr_2lvp 1 . THR 7 7 rr_2lvp 1 . LEU 8 8 rr_2lvp 1 . THR 9 9 rr_2lvp 1 . GLY 10 10 rr_2lvp 1 . LYS 11 11 rr_2lvp 1 . THR 12 12 rr_2lvp 1 . ILE 13 13 rr_2lvp 1 . THR 14 14 rr_2lvp 1 . LEU 15 15 rr_2lvp 1 . GLU 16 16 rr_2lvp 1 . VAL 17 17 rr_2lvp 1 . GLU 18 18 rr_2lvp 1 . PRO 19 19 rr_2lvp 1 . SER 20 20 rr_2lvp 1 . ASP 21 21 rr_2lvp 1 . THR 22 22 rr_2lvp 1 . ILE 23 23 rr_2lvp 1 . GLU 24 24 rr_2lvp 1 . ASN 25 25 rr_2lvp 1 . VAL 26 26 rr_2lvp 1 . LYS 27 27 rr_2lvp 1 . ALA 28 28 rr_2lvp 1 . LYS 29 29 rr_2lvp 1 . ILE 30 30 rr_2lvp 1 . GLN 31 31 rr_2lvp 1 . ASP 32 32 rr_2lvp 1 . LYS 33 33 rr_2lvp 1 . GLU 34 34 rr_2lvp 1 . GLY 35 35 rr_2lvp 1 . ILE 36 36 rr_2lvp 1 . PRO 37 37 rr_2lvp 1 . PRO 38 38 rr_2lvp 1 . ASP 39 39 rr_2lvp 1 . GLN 40 40 rr_2lvp 1 . GLN 41 41 rr_2lvp 1 . ARG 42 42 rr_2lvp 1 . LEU 43 43 rr_2lvp 1 . ILE 44 44 rr_2lvp 1 . PHE 45 45 rr_2lvp 1 . ALA 46 46 rr_2lvp 1 . GLY 47 47 rr_2lvp 1 . LYS 48 48 rr_2lvp 1 . GLN 49 49 rr_2lvp 1 . LEU 50 50 rr_2lvp 1 . GLU 51 51 rr_2lvp 1 . ASP 52 52 rr_2lvp 1 . GLY 53 53 rr_2lvp 1 . ARG 54 54 rr_2lvp 1 . THR 55 55 rr_2lvp 1 . LEU 56 56 rr_2lvp 1 . SER 57 57 rr_2lvp 1 . ASP 58 58 rr_2lvp 1 . TYR 59 59 rr_2lvp 1 . ASN 60 60 rr_2lvp 1 . ILE 61 61 rr_2lvp 1 . GLN 62 62 rr_2lvp 1 . LYS 63 63 rr_2lvp 1 . GLU 64 64 rr_2lvp 1 . SER 65 65 rr_2lvp 1 . THR 66 66 rr_2lvp 1 . LEU 67 67 rr_2lvp 1 . HIS 68 68 rr_2lvp 1 . LEU 69 69 rr_2lvp 1 . VAL 70 70 rr_2lvp 1 . LEU 71 71 rr_2lvp 1 . ARG 72 72 rr_2lvp 1 . LEU 73 73 rr_2lvp 1 . ARG 74 74 rr_2lvp 1 . GLY 75 75 rr_2lvp 1 . GLY 76 76 rr_2lvp 1 stop_ save_ save_E3_ubiquitin_protein_ligase_AMFR _Entity.Sf_category entity _Entity.Sf_framecode E3_ubiquitin_protein_ligase_AMFR _Entity.Entry_ID rr_2lvp _Entity.ID 2 _Entity.Name E3_ubiquitin_protein_ligase_AMFR _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID C _Entity.Polymer_seq_one_letter_code ; SNSQLNAMAHQIQEMFPQVP YHLVLQDLQLTRSVEITTDN ILEGRIQVPFPT ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 52 _Entity.Paramagnetic no _Entity.Thiol_state 'not present' _Entity.Parent_entity_ID 2 _Entity.Formula_weight 5959.7521 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . SER . rr_2lvp 2 2 . ASN . rr_2lvp 2 3 . SER . rr_2lvp 2 4 . GLN . rr_2lvp 2 5 . LEU . rr_2lvp 2 6 . ASN . rr_2lvp 2 7 . ALA . rr_2lvp 2 8 . MET . rr_2lvp 2 9 . ALA . rr_2lvp 2 10 . HIS . rr_2lvp 2 11 . GLN . rr_2lvp 2 12 . ILE . rr_2lvp 2 13 . GLN . rr_2lvp 2 14 . GLU . rr_2lvp 2 15 . MET . rr_2lvp 2 16 . PHE . rr_2lvp 2 17 . PRO . rr_2lvp 2 18 . GLN . rr_2lvp 2 19 . VAL . rr_2lvp 2 20 . PRO . rr_2lvp 2 21 . TYR . rr_2lvp 2 22 . HIS . rr_2lvp 2 23 . LEU . rr_2lvp 2 24 . VAL . rr_2lvp 2 25 . LEU . rr_2lvp 2 26 . GLN . rr_2lvp 2 27 . ASP . rr_2lvp 2 28 . LEU . rr_2lvp 2 29 . GLN . rr_2lvp 2 30 . LEU . rr_2lvp 2 31 . THR . rr_2lvp 2 32 . ARG . rr_2lvp 2 33 . SER . rr_2lvp 2 34 . VAL . rr_2lvp 2 35 . GLU . rr_2lvp 2 36 . ILE . rr_2lvp 2 37 . THR . rr_2lvp 2 38 . THR . rr_2lvp 2 39 . ASP . rr_2lvp 2 40 . ASN . rr_2lvp 2 41 . ILE . rr_2lvp 2 42 . LEU . rr_2lvp 2 43 . GLU . rr_2lvp 2 44 . GLY . rr_2lvp 2 45 . ARG . rr_2lvp 2 46 . ILE . rr_2lvp 2 47 . GLN . rr_2lvp 2 48 . VAL . rr_2lvp 2 49 . PRO . rr_2lvp 2 50 . PHE . rr_2lvp 2 51 . PRO . rr_2lvp 2 52 . THR . rr_2lvp 2 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . SER 1 1 rr_2lvp 2 . ASN 2 2 rr_2lvp 2 . SER 3 3 rr_2lvp 2 . GLN 4 4 rr_2lvp 2 . LEU 5 5 rr_2lvp 2 . ASN 6 6 rr_2lvp 2 . ALA 7 7 rr_2lvp 2 . MET 8 8 rr_2lvp 2 . ALA 9 9 rr_2lvp 2 . HIS 10 10 rr_2lvp 2 . GLN 11 11 rr_2lvp 2 . ILE 12 12 rr_2lvp 2 . GLN 13 13 rr_2lvp 2 . GLU 14 14 rr_2lvp 2 . MET 15 15 rr_2lvp 2 . PHE 16 16 rr_2lvp 2 . PRO 17 17 rr_2lvp 2 . GLN 18 18 rr_2lvp 2 . VAL 19 19 rr_2lvp 2 . PRO 20 20 rr_2lvp 2 . TYR 21 21 rr_2lvp 2 . HIS 22 22 rr_2lvp 2 . LEU 23 23 rr_2lvp 2 . VAL 24 24 rr_2lvp 2 . LEU 25 25 rr_2lvp 2 . GLN 26 26 rr_2lvp 2 . ASP 27 27 rr_2lvp 2 . LEU 28 28 rr_2lvp 2 . GLN 29 29 rr_2lvp 2 . LEU 30 30 rr_2lvp 2 . THR 31 31 rr_2lvp 2 . ARG 32 32 rr_2lvp 2 . SER 33 33 rr_2lvp 2 . VAL 34 34 rr_2lvp 2 . GLU 35 35 rr_2lvp 2 . ILE 36 36 rr_2lvp 2 . THR 37 37 rr_2lvp 2 . THR 38 38 rr_2lvp 2 . ASP 39 39 rr_2lvp 2 . ASN 40 40 rr_2lvp 2 . ILE 41 41 rr_2lvp 2 . LEU 42 42 rr_2lvp 2 . GLU 43 43 rr_2lvp 2 . GLY 44 44 rr_2lvp 2 . ARG 45 45 rr_2lvp 2 . ILE 46 46 rr_2lvp 2 . GLN 47 47 rr_2lvp 2 . VAL 48 48 rr_2lvp 2 . PRO 49 49 rr_2lvp 2 . PHE 50 50 rr_2lvp 2 . PRO 51 51 rr_2lvp 2 . THR 52 52 rr_2lvp 2 stop_ save_ ############################## # Structure determinations # ############################## ########################## # Conformer statistics # ########################## save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2lvp _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ ########################### # Constraint Statistics # ########################### save_constraint_statistics _Constraint_stat_list.Sf_framecode constraint_statistics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2lvp _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2lvp.mr . . 'MR format' 1 comment 'Not applicable' 'Not applicable' 0 rr_2lvp 1 1 2lvp.mr . . HADDOCK 2 distance NOE ambi 0 rr_2lvp 1 1 2lvp.mr . . XPLOR/CNS 3 distance NOE simple 44 rr_2lvp 1 1 2lvp.mr . . 'MR format' 4 'nomenclature mapping' 'Not applicable' 'Not applicable' 0 rr_2lvp 1 stop_ save_ save_CNS/XPLOR_distance_constraints_3 _Gen_dist_constraint_list.Sf_category general_distance_constraints _Gen_dist_constraint_list.Sf_framecode CNS/XPLOR_distance_constraints_3 _Gen_dist_constraint_list.Entry_ID rr_2lvp _Gen_dist_constraint_list.ID 1 _Gen_dist_constraint_list.Constraint_type NOE _Gen_dist_constraint_list.Details 'Generated by Wattos' _Gen_dist_constraint_list.Constraint_file_ID 1 _Gen_dist_constraint_list.Block_ID 3 loop_ _Gen_dist_constraint_software.Software_ID _Gen_dist_constraint_software.Software_label _Gen_dist_constraint_software.Method_ID _Gen_dist_constraint_software.Method_label _Gen_dist_constraint_software.Entry_ID _Gen_dist_constraint_software.Gen_dist_constraint_list_ID . . . . rr_2lvp 1 stop_ loop_ _Gen_dist_constraint.ID _Gen_dist_constraint.Member_ID _Gen_dist_constraint.Member_logic_code _Gen_dist_constraint.Assembly_atom_ID_1 _Gen_dist_constraint.Entity_assembly_ID_1 _Gen_dist_constraint.Entity_ID_1 _Gen_dist_constraint.Comp_index_ID_1 _Gen_dist_constraint.Seq_ID_1 _Gen_dist_constraint.Comp_ID_1 _Gen_dist_constraint.Atom_ID_1 _Gen_dist_constraint.Atom_type_1 _Gen_dist_constraint.Atom_isotope_number_1 _Gen_dist_constraint.Resonance_ID_1 _Gen_dist_constraint.Assembly_atom_ID_2 _Gen_dist_constraint.Entity_assembly_ID_2 _Gen_dist_constraint.Entity_ID_2 _Gen_dist_constraint.Comp_index_ID_2 _Gen_dist_constraint.Seq_ID_2 _Gen_dist_constraint.Comp_ID_2 _Gen_dist_constraint.Atom_ID_2 _Gen_dist_constraint.Atom_type_2 _Gen_dist_constraint.Atom_isotope_number_2 _Gen_dist_constraint.Resonance_ID_2 _Gen_dist_constraint.Intensity_val _Gen_dist_constraint.Intensity_lower_val_err _Gen_dist_constraint.Intensity_upper_val_err _Gen_dist_constraint.Distance_val _Gen_dist_constraint.Distance_lower_bound_val _Gen_dist_constraint.Distance_upper_bound_val _Gen_dist_constraint.Contribution_fractional_val _Gen_dist_constraint.Spectral_peak_ID _Gen_dist_constraint.Spectral_peak_list_ID _Gen_dist_constraint.PDB_record_ID_1 _Gen_dist_constraint.PDB_model_num_1 _Gen_dist_constraint.PDB_strand_ID_1 _Gen_dist_constraint.PDB_ins_code_1 _Gen_dist_constraint.PDB_residue_no_1 _Gen_dist_constraint.PDB_residue_name_1 _Gen_dist_constraint.PDB_atom_name_1 _Gen_dist_constraint.PDB_record_ID_2 _Gen_dist_constraint.PDB_model_num_2 _Gen_dist_constraint.PDB_strand_ID_2 _Gen_dist_constraint.PDB_ins_code_2 _Gen_dist_constraint.PDB_residue_no_2 _Gen_dist_constraint.PDB_residue_name_2 _Gen_dist_constraint.PDB_atom_name_2 _Gen_dist_constraint.Auth_entity_assembly_ID_1 _Gen_dist_constraint.Auth_asym_ID_1 _Gen_dist_constraint.Auth_chain_ID_1 _Gen_dist_constraint.Auth_seq_ID_1 _Gen_dist_constraint.Auth_comp_ID_1 _Gen_dist_constraint.Auth_atom_ID_1 _Gen_dist_constraint.Auth_alt_ID_1 _Gen_dist_constraint.Auth_atom_name_1 _Gen_dist_constraint.Auth_entity_assembly_ID_2 _Gen_dist_constraint.Auth_asym_ID_2 _Gen_dist_constraint.Auth_chain_ID_2 _Gen_dist_constraint.Auth_seq_ID_2 _Gen_dist_constraint.Auth_comp_ID_2 _Gen_dist_constraint.Auth_atom_ID_2 _Gen_dist_constraint.Auth_alt_ID_2 _Gen_dist_constraint.Auth_atom_name_2 _Gen_dist_constraint.Entry_ID _Gen_dist_constraint.Gen_dist_constraint_list_ID 1 1 . . 3 2 12 12 ILE MD H . . . 1 1 8 8 LEU HA H . . . . . 6.00 4.2 7.00 . . . . . C . 464 ILE MD . . A . 8 LEU HA . C . 464 . HD11 . . . A . 8 . HA . . rr_2lvp 1 2 1 . . 3 2 15 15 MET ME H . . . 1 1 44 44 ILE MD H . . . . . 6.00 4.2 7.00 . . . . . C . 467 MET ME . . A . 44 ILE MD . C . 467 . HE . . . A . 44 . HD11 . . rr_2lvp 1 3 1 . . 3 2 15 15 MET ME H . . . 1 1 68 68 HIS HA H . . . . . 6.00 4.2 7.00 . . . . . C . 467 MET ME . . A . 68 HIS HA . C . 467 . HE . . . A . 68 . HA . . rr_2lvp 1 4 1 . . 1 1 8 8 LEU HA H . . . 3 2 15 15 MET ME H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HA . . C . 467 MET ME . A . 8 . HA . . . C . 467 . HE . . rr_2lvp 1 5 1 . . 3 2 15 15 MET ME H . . . 1 1 70 70 VAL HA H . . . . . 8.00 6.2 9.00 . . . . . C . 467 MET ME . . A . 70 VAL HA . C . 467 . HE . . . A . 70 . HA . . rr_2lvp 1 6 1 . . 1 1 8 8 LEU HA H . . . 3 2 34 34 VAL MG1 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HA . . C . 486 VAL MG1 . A . 8 . HA . . . C . 486 . HG11 . . rr_2lvp 1 7 1 . . 3 2 34 34 VAL MG1 H . . . 1 1 8 8 LEU HB3 H . . . . . 6.00 4.2 7.00 . . . . . C . 486 VAL MG1 . . A . 8 LEU HB3 . C . 486 . HG12 . . . A . 8 . HB3 . . rr_2lvp 1 8 1 . . 3 2 34 34 VAL MG1 H . . . 1 1 8 8 LEU HG H . . . . . 6.00 4.2 7.00 . . . . . C . 486 VAL MG1 . . A . 8 LEU HG . C . 486 . HG13 . . . A . 8 . HG . . rr_2lvp 1 9 1 . . 1 1 8 8 LEU HA H . . . 3 2 34 34 VAL MG2 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HA . . C . 486 VAL MG2 . A . 8 . HA . . . C . 486 . HG21 . . rr_2lvp 1 10 1 . . 1 1 8 8 LEU HB3 H . . . 3 2 34 34 VAL MG2 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HB3 . . C . 486 VAL MG2 . A . 8 . HB3 . . . C . 486 . HG22 . . rr_2lvp 1 11 1 . . 1 1 8 8 LEU HG H . . . 3 2 34 34 VAL MG2 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HG . . C . 486 VAL MG2 . A . 8 . HG . . . C . 486 . HG23 . . rr_2lvp 1 12 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 42 42 ARG HB3 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 42 ARG HB3 . C . 494 . HD11 . . . A . 42 . HB3 . . rr_2lvp 1 13 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 42 42 ARG HD2 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 42 ARG HD2 . C . 494 . HD12 . . . A . 42 . HD2 . . rr_2lvp 1 14 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 42 42 ARG HG3 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 42 ARG HG3 . C . 494 . HD13 . . . A . 42 . HG3 . . rr_2lvp 1 15 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 48 48 LYS HA H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 48 LYS HA . C . 494 . HD11 . . . A . 48 . HA . . rr_2lvp 1 16 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 49 49 GLN HB2 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 49 GLN HB2 . C . 494 . HD12 . . . A . 49 . HB2 . . rr_2lvp 1 17 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 49 49 GLN HG2 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 49 GLN HG2 . C . 494 . HD13 . . . A . 49 . HG2 . . rr_2lvp 1 18 1 . . 1 1 42 42 ARG HD2 H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 42 ARG HD2 . . C . 494 LEU MD2 . A . 42 . HD2 . . . C . 494 . HD21 . . rr_2lvp 1 19 1 . . 1 1 42 42 ARG HG3 H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 42 ARG HG3 . . C . 494 LEU MD2 . A . 42 . HG3 . . . C . 494 . HD22 . . rr_2lvp 1 20 1 . . 1 1 48 48 LYS HA H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 48 LYS HA . . C . 494 LEU MD2 . A . 48 . HA . . . C . 494 . HD23 . . rr_2lvp 1 21 1 . . 1 1 49 49 GLN HB2 H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 49 GLN HB2 . . C . 494 LEU MD2 . A . 49 . HB2 . . . C . 494 . HD21 . . rr_2lvp 1 22 1 OR . 3 2 42 42 LEU MD2 H . . . 1 1 49 49 GLN HE22 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 49 GLN HE22 . C . 494 . HD22 . . . A . 49 . HE2 . . rr_2lvp 1 22 2 OR . 3 2 42 42 LEU MD2 H . . . 1 1 49 49 GLN HE21 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 49 GLN HE21 . C . 494 . HD22 . . . A . 49 . HE2 . . rr_2lvp 1 23 1 . . 1 1 49 49 GLN HG2 H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 49 GLN HG2 . . C . 494 LEU MD2 . A . 49 . HG2 . . . C . 494 . HD23 . . rr_2lvp 1 24 1 . . 1 1 44 44 ILE MD H . . . 3 2 42 42 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . A . 44 ILE MD . . C . 494 LEU MD2 . A . 44 . HD11 . . . C . 494 . HD21 . . rr_2lvp 1 25 1 . . 3 2 42 42 LEU MD2 H . . . 1 1 70 70 VAL MG1 H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 70 VAL MG1 . C . 494 . HD22 . . . A . 70 . HG11 . . rr_2lvp 1 26 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 44 44 ILE H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 44 ILE H . C . 494 . HD11 . . . A . 44 . HN . . rr_2lvp 1 27 1 . . 3 2 42 42 LEU MD2 H . . . 1 1 44 44 ILE H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 44 ILE H . C . 494 . HD22 . . . A . 44 . HN . . rr_2lvp 1 28 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 70 70 VAL H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 70 VAL H . C . 494 . HD12 . . . A . 70 . HN . . rr_2lvp 1 29 1 . . 3 2 42 42 LEU MD2 H . . . 1 1 70 70 VAL H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 70 VAL H . C . 494 . HD22 . . . A . 70 . HN . . rr_2lvp 1 30 1 . . 3 2 42 42 LEU MD1 H . . . 1 1 43 43 LEU H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD1 . . A . 43 LEU H . C . 494 . HD11 . . . A . 43 . HN . . rr_2lvp 1 31 1 . . 3 2 42 42 LEU MD2 H . . . 1 1 43 43 LEU H H . . . . . 6.00 4.2 7.00 . . . . . C . 494 LEU MD2 . . A . 43 LEU H . C . 494 . HD22 . . . A . 43 . HN . . rr_2lvp 1 32 1 . . 3 2 36 36 ILE H H . . . 1 1 73 73 LEU MD1 H . . . . . 6.00 4.2 7.00 . . . . . C . 488 ILE H . . A . 73 LEU MD1 . C . 488 . HN . . . A . 73 . HD11 . . rr_2lvp 1 33 1 . . 3 2 37 37 THR H H . . . 1 1 72 72 ARG HA H . . . . . 6.00 4.2 7.00 . . . . . C . 489 THR H . . A . 72 ARG HA . C . 489 . HN . . . A . 72 . HA . . rr_2lvp 1 34 1 . . 1 1 72 72 ARG HA H . . . 3 2 38 38 THR H H . . . . . 6.00 4.2 7.00 . . . . . A . 72 ARG HA . . C . 490 THR H . A . 72 . HA . . . C . 490 . HN . . rr_2lvp 1 35 1 . . 1 1 72 72 ARG HA H . . . 3 2 39 39 ASP H H . . . . . 6.00 4.2 7.00 . . . . . A . 72 ARG HA . . C . 491 ASP H . A . 72 . HA . . . C . 491 . HN . . rr_2lvp 1 36 1 . . 1 1 73 73 LEU MD1 H . . . 3 2 40 40 ASN H H . . . . . 6.00 4.2 7.00 . . . . . A . 73 LEU MD1 . . C . 492 ASN H . A . 73 . HD11 . . . C . 492 . HN . . rr_2lvp 1 37 1 . . 3 2 11 11 GLN HE21 H . . . 1 1 8 8 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . C . 463 GLN HE21 . . A . 8 LEU MD2 . C . 463 . HE21 . . . A . 8 . HD23 . . rr_2lvp 1 38 1 . . 3 2 11 11 GLN HE22 H . . . 1 1 8 8 LEU MD2 H . . . . . 6.00 4.2 7.00 . . . . . C . 463 GLN HE22 . . A . 8 LEU MD2 . C . 463 . HE22 . . . A . 8 . HD22 . . rr_2lvp 1 39 1 . . 1 1 8 8 LEU HA H . . . 3 2 11 11 GLN HE21 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HA . . C . 463 GLN HE21 . A . 8 . HA . . . C . 463 . HE21 . . rr_2lvp 1 40 1 . . 1 1 8 8 LEU HA H . . . 3 2 11 11 GLN HE22 H . . . . . 6.00 4.2 7.00 . . . . . A . 8 LEU HA . . C . 463 GLN HE22 . A . 8 . HA . . . C . 463 . HE22 . . rr_2lvp 1 41 1 . . 1 1 8 8 LEU HG H . . . 3 2 11 11 GLN HE21 H . . . . . 8.00 6.2 9.00 . . . . . A . 8 LEU HG . . C . 463 GLN HE21 . A . 8 . HG . . . C . 463 . HE21 . . rr_2lvp 1 42 1 . . 1 1 8 8 LEU HG H . . . 3 2 11 11 GLN HE22 H . . . . . 8.00 6.2 9.00 . . . . . A . 8 LEU HG . . C . 463 GLN HE22 . A . 8 . HG . . . C . 463 . HE22 . . rr_2lvp 1 43 1 . . 1 1 76 76 GLY C C . . . 2 1 48 48 LYS NZ N . . . . . 1.34 0.0 1.34 . . . . . A . 76 GLY C . . B . 48 LYS NZ . A . 76 . C . . . B . 48 . NZ . . rr_2lvp 1 44 1 . . 3 2 30 30 LEU MD2 H . . . 2 1 66 66 THR HB H . . . . . 8.00 6.2 9.00 . . . . . C . 482 LEU MD2 . . B . 66 THR HB . C . 482 . HD21 . . . B . 66 . HB . . rr_2lvp 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2lvp _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details 'Generated by Wattos' _Org_constr_file_comment.Comment ; *HEADER SIGNALING PROTEIN/LIGASE 09-JUL-12 2LVP *TITLE SOLUTION STRUCTURE OF THE GP78CUE/K48-UB2 COMPLEX *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: UBIQUITIN; *COMPND 3 CHAIN: A, B; *COMPND 4 ENGINEERED: YES; *COMPND 5 MOL_ID: 2; *COMPND 6 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE AMFR; *COMPND 7 CHAIN: C; *COMPND 8 FRAGMENT: CUE DOMAIN RESIDUES 453-504; *COMPND 9 SYNONYM: AUTOCRINE MOTILITY FACTOR RECEPTOR, ISOFORM 2, AMF RECEPTOR, *COMPND 10 ISOFORM 2, RING FINGER PROTEIN 45, GP78; *COMPND 11 EC: 6.3.2.-; *COMPND 12 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 ORGANISM_TAXID: 9606; *SOURCE 5 GENE: UBC; *SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET3A; *SOURCE 9 MOL_ID: 2; *SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 11 ORGANISM_COMMON: HUMAN; *SOURCE 12 ORGANISM_TAXID: 9606; *SOURCE 13 GENE: AMFR, RNF45; *SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; *SOURCE 16 EXPRESSION_SYSTEM_VECTOR: PET3A *KEYWDS CUE DOMAIN, SIGNALING PROTEIN-LIGASE COMPLEX *EXPDTA SOLUTION NMR *NUMMDL 20 *AUTHOR S.LIU, Y.CHEN, T.HUANG, S.G.TARASOV, A.KING, J.LI, A.M.WEISSMAN, *AUTHOR 2 R.A.BYRD, R.DAS *REVDAT 1 21-NOV-12 2LVP 0 ; save_