data_wwPDB_remediated_restraints_file_for_PDB_entry_2rnw # This wwPDB archive file contains, for PDB entry 2rnw: # # - Sequence information from the PDB mmCIF file # - NMR restraints from the PDB MR file # # In this file, the NMR restraints share the same atom names as in the coordinate # file, and in this way can differ from the data deposited at the wwPDB. To achieve # this aim, the NMR restraints were parsed from their original format files, and # the coordinates and NMR restraints information were subsequently harmonized. # # Due to the complexity of this harmonization process, minor modifications could # have occurred to the NMR restraints information, or data could have been lost # because of parsing or conversion errors. The PDB file remains the # authoritative reference for the atomic coordinates and the originally deposited # restraints files remain the primary reference for these data. # # This file is generated as part of the wwPDB at the BioMagResBank (BMRB) in # collaboration with the PDBe (formerly MSD) group at the European # Bioinformatics Institute (EBI) and the CMBI/IMM group at the Radboud # University of Nijmegen. # # Several software packages were used to produce this file: # # - Wattos (BMRB and CMBI/IMM). # - FormatConverter and NMRStarExport (PDBe). # - CCPN framework (http://www.ccpn.ac.uk/). # # More information about this process can be found in the references below. # Please cite the original reference for this PDB entry. # # JF Doreleijers, A Nederveen, W Vranken, J Lin, AM Bonvin, R Kaptein, JL # Markley, and EL Ulrich (2005). BioMagResBank databases DOCR and FRED # containing converted and filtered sets of experimental NMR restraints and # coordinates from over 500 protein PDB structures. J. Biomol. NMR 32, 1-12. # # WF Vranken, W Boucher, TJ Stevens, RH Fogh, A Pajon, M Llinas, EL Ulrich, JL # Markley, J Ionides, ED Laue (2005). The CCPN data model for NMR spectroscopy: # development of a software pipeline. Proteins 59, 687-696. # # JF Doreleijers, WF Vranken, C Schulte, J Lin, JR Wedell, CJ Penkett, GW Vuister, # G Vriend, JL Markley, and EL Ulrich (2009). The NMR Restraints Grid at BMRB for # 5,266 Protein and Nucleic Acid PDB Entries. J Biomol. NMR 45, 389–396. save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID rr_2rnw _Entry.Title "wwPDB remediated NMR restraints for PDB entry 2rnw" _Entry.NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype solution _Entry.Details "Contains the remediated restraint lists and coordinates for PDB entry 2rnw" save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID rr_2rnw _Assembly.ID 1 _Assembly.Name 2rnw _Assembly.Number_of_components 2 _Assembly.Organic_ligands 0 _Assembly.Metal_ions 0 _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state "all free" _Assembly.Molecular_mass 15473.8501 loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 "Histone acetyltransferase PCAF" 1 $Histone_acetyltransferase_PCAF A . no . . . . . . rr_2rnw 1 2 "Histone H3" 2 $Histone_H3 B . no . . . . . . rr_2rnw 1 stop_ save_ save_Histone_acetyltransferase_PCAF _Entity.Sf_category entity _Entity.Sf_framecode Histone_acetyltransferase_PCAF _Entity.Entry_ID rr_2rnw _Entity.ID 1 _Entity.Name Histone_acetyltransferase_PCAF _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code ; GSHMSKEPRDPDQLYSTLKS ILQQVKSHQSAWPFMEPVKR TEAPGYYEVIRFPMDLKTMS ERLKNRYYVSKKLFMADLQR VFTNCKEYNPPESEYYKCAN ILEKFFFSKIKEAGLIDK ; _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 118 _Entity.Paramagnetic no _Entity.Thiol_state "all free" _Entity.Parent_entity_ID 1 _Entity.Formula_weight 14037.2199 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . GLY . rr_2rnw 1 2 . SER . rr_2rnw 1 3 . HIS . rr_2rnw 1 4 . MET . rr_2rnw 1 5 . SER . rr_2rnw 1 6 . LYS . rr_2rnw 1 7 . GLU . rr_2rnw 1 8 . PRO . rr_2rnw 1 9 . ARG . rr_2rnw 1 10 . ASP . rr_2rnw 1 11 . PRO . rr_2rnw 1 12 . ASP . rr_2rnw 1 13 . GLN . rr_2rnw 1 14 . LEU . rr_2rnw 1 15 . TYR . rr_2rnw 1 16 . SER . rr_2rnw 1 17 . THR . rr_2rnw 1 18 . LEU . rr_2rnw 1 19 . LYS . rr_2rnw 1 20 . SER . rr_2rnw 1 21 . ILE . rr_2rnw 1 22 . LEU . rr_2rnw 1 23 . GLN . rr_2rnw 1 24 . GLN . rr_2rnw 1 25 . VAL . rr_2rnw 1 26 . LYS . rr_2rnw 1 27 . SER . rr_2rnw 1 28 . HIS . rr_2rnw 1 29 . GLN . rr_2rnw 1 30 . SER . rr_2rnw 1 31 . ALA . rr_2rnw 1 32 . TRP . rr_2rnw 1 33 . PRO . rr_2rnw 1 34 . PHE . rr_2rnw 1 35 . MET . rr_2rnw 1 36 . GLU . rr_2rnw 1 37 . PRO . rr_2rnw 1 38 . VAL . rr_2rnw 1 39 . LYS . rr_2rnw 1 40 . ARG . rr_2rnw 1 41 . THR . rr_2rnw 1 42 . GLU . rr_2rnw 1 43 . ALA . rr_2rnw 1 44 . PRO . rr_2rnw 1 45 . GLY . rr_2rnw 1 46 . TYR . rr_2rnw 1 47 . TYR . rr_2rnw 1 48 . GLU . rr_2rnw 1 49 . VAL . rr_2rnw 1 50 . ILE . rr_2rnw 1 51 . ARG . rr_2rnw 1 52 . PHE . rr_2rnw 1 53 . PRO . rr_2rnw 1 54 . MET . rr_2rnw 1 55 . ASP . rr_2rnw 1 56 . LEU . rr_2rnw 1 57 . LYS . rr_2rnw 1 58 . THR . rr_2rnw 1 59 . MET . rr_2rnw 1 60 . SER . rr_2rnw 1 61 . GLU . rr_2rnw 1 62 . ARG . rr_2rnw 1 63 . LEU . rr_2rnw 1 64 . LYS . rr_2rnw 1 65 . ASN . rr_2rnw 1 66 . ARG . rr_2rnw 1 67 . TYR . rr_2rnw 1 68 . TYR . rr_2rnw 1 69 . VAL . rr_2rnw 1 70 . SER . rr_2rnw 1 71 . LYS . rr_2rnw 1 72 . LYS . rr_2rnw 1 73 . LEU . rr_2rnw 1 74 . PHE . rr_2rnw 1 75 . MET . rr_2rnw 1 76 . ALA . rr_2rnw 1 77 . ASP . rr_2rnw 1 78 . LEU . rr_2rnw 1 79 . GLN . rr_2rnw 1 80 . ARG . rr_2rnw 1 81 . VAL . rr_2rnw 1 82 . PHE . rr_2rnw 1 83 . THR . rr_2rnw 1 84 . ASN . rr_2rnw 1 85 . CYS . rr_2rnw 1 86 . LYS . rr_2rnw 1 87 . GLU . rr_2rnw 1 88 . TYR . rr_2rnw 1 89 . ASN . rr_2rnw 1 90 . PRO . rr_2rnw 1 91 . PRO . rr_2rnw 1 92 . GLU . rr_2rnw 1 93 . SER . rr_2rnw 1 94 . GLU . rr_2rnw 1 95 . TYR . rr_2rnw 1 96 . TYR . rr_2rnw 1 97 . LYS . rr_2rnw 1 98 . CYS . rr_2rnw 1 99 . ALA . rr_2rnw 1 100 . ASN . rr_2rnw 1 101 . ILE . rr_2rnw 1 102 . LEU . rr_2rnw 1 103 . GLU . rr_2rnw 1 104 . LYS . rr_2rnw 1 105 . PHE . rr_2rnw 1 106 . PHE . rr_2rnw 1 107 . PHE . rr_2rnw 1 108 . SER . rr_2rnw 1 109 . LYS . rr_2rnw 1 110 . ILE . rr_2rnw 1 111 . LYS . rr_2rnw 1 112 . GLU . rr_2rnw 1 113 . ALA . rr_2rnw 1 114 . GLY . rr_2rnw 1 115 . LEU . rr_2rnw 1 116 . ILE . rr_2rnw 1 117 . ASP . rr_2rnw 1 118 . LYS . rr_2rnw 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . GLY 1 1 rr_2rnw 1 . SER 2 2 rr_2rnw 1 . HIS 3 3 rr_2rnw 1 . MET 4 4 rr_2rnw 1 . SER 5 5 rr_2rnw 1 . LYS 6 6 rr_2rnw 1 . GLU 7 7 rr_2rnw 1 . PRO 8 8 rr_2rnw 1 . ARG 9 9 rr_2rnw 1 . ASP 10 10 rr_2rnw 1 . PRO 11 11 rr_2rnw 1 . ASP 12 12 rr_2rnw 1 . GLN 13 13 rr_2rnw 1 . LEU 14 14 rr_2rnw 1 . TYR 15 15 rr_2rnw 1 . SER 16 16 rr_2rnw 1 . THR 17 17 rr_2rnw 1 . LEU 18 18 rr_2rnw 1 . LYS 19 19 rr_2rnw 1 . SER 20 20 rr_2rnw 1 . ILE 21 21 rr_2rnw 1 . LEU 22 22 rr_2rnw 1 . GLN 23 23 rr_2rnw 1 . GLN 24 24 rr_2rnw 1 . VAL 25 25 rr_2rnw 1 . LYS 26 26 rr_2rnw 1 . SER 27 27 rr_2rnw 1 . HIS 28 28 rr_2rnw 1 . GLN 29 29 rr_2rnw 1 . SER 30 30 rr_2rnw 1 . ALA 31 31 rr_2rnw 1 . TRP 32 32 rr_2rnw 1 . PRO 33 33 rr_2rnw 1 . PHE 34 34 rr_2rnw 1 . MET 35 35 rr_2rnw 1 . GLU 36 36 rr_2rnw 1 . PRO 37 37 rr_2rnw 1 . VAL 38 38 rr_2rnw 1 . LYS 39 39 rr_2rnw 1 . ARG 40 40 rr_2rnw 1 . THR 41 41 rr_2rnw 1 . GLU 42 42 rr_2rnw 1 . ALA 43 43 rr_2rnw 1 . PRO 44 44 rr_2rnw 1 . GLY 45 45 rr_2rnw 1 . TYR 46 46 rr_2rnw 1 . TYR 47 47 rr_2rnw 1 . GLU 48 48 rr_2rnw 1 . VAL 49 49 rr_2rnw 1 . ILE 50 50 rr_2rnw 1 . ARG 51 51 rr_2rnw 1 . PHE 52 52 rr_2rnw 1 . PRO 53 53 rr_2rnw 1 . MET 54 54 rr_2rnw 1 . ASP 55 55 rr_2rnw 1 . LEU 56 56 rr_2rnw 1 . LYS 57 57 rr_2rnw 1 . THR 58 58 rr_2rnw 1 . MET 59 59 rr_2rnw 1 . SER 60 60 rr_2rnw 1 . GLU 61 61 rr_2rnw 1 . ARG 62 62 rr_2rnw 1 . LEU 63 63 rr_2rnw 1 . LYS 64 64 rr_2rnw 1 . ASN 65 65 rr_2rnw 1 . ARG 66 66 rr_2rnw 1 . TYR 67 67 rr_2rnw 1 . TYR 68 68 rr_2rnw 1 . VAL 69 69 rr_2rnw 1 . SER 70 70 rr_2rnw 1 . LYS 71 71 rr_2rnw 1 . LYS 72 72 rr_2rnw 1 . LEU 73 73 rr_2rnw 1 . PHE 74 74 rr_2rnw 1 . MET 75 75 rr_2rnw 1 . ALA 76 76 rr_2rnw 1 . ASP 77 77 rr_2rnw 1 . LEU 78 78 rr_2rnw 1 . GLN 79 79 rr_2rnw 1 . ARG 80 80 rr_2rnw 1 . VAL 81 81 rr_2rnw 1 . PHE 82 82 rr_2rnw 1 . THR 83 83 rr_2rnw 1 . ASN 84 84 rr_2rnw 1 . CYS 85 85 rr_2rnw 1 . LYS 86 86 rr_2rnw 1 . GLU 87 87 rr_2rnw 1 . TYR 88 88 rr_2rnw 1 . ASN 89 89 rr_2rnw 1 . PRO 90 90 rr_2rnw 1 . PRO 91 91 rr_2rnw 1 . GLU 92 92 rr_2rnw 1 . SER 93 93 rr_2rnw 1 . GLU 94 94 rr_2rnw 1 . TYR 95 95 rr_2rnw 1 . TYR 96 96 rr_2rnw 1 . LYS 97 97 rr_2rnw 1 . CYS 98 98 rr_2rnw 1 . ALA 99 99 rr_2rnw 1 . ASN 100 100 rr_2rnw 1 . ILE 101 101 rr_2rnw 1 . LEU 102 102 rr_2rnw 1 . GLU 103 103 rr_2rnw 1 . LYS 104 104 rr_2rnw 1 . PHE 105 105 rr_2rnw 1 . PHE 106 106 rr_2rnw 1 . PHE 107 107 rr_2rnw 1 . SER 108 108 rr_2rnw 1 . LYS 109 109 rr_2rnw 1 . ILE 110 110 rr_2rnw 1 . LYS 111 111 rr_2rnw 1 . GLU 112 112 rr_2rnw 1 . ALA 113 113 rr_2rnw 1 . GLY 114 114 rr_2rnw 1 . LEU 115 115 rr_2rnw 1 . ILE 116 116 rr_2rnw 1 . ASP 117 117 rr_2rnw 1 . LYS 118 118 rr_2rnw 1 stop_ save_ save_Histone_H3 _Entity.Sf_category entity _Entity.Sf_framecode Histone_H3 _Entity.Entry_ID rr_2rnw _Entity.ID 2 _Entity.Name Histone_H3 _Entity.Type polymer _Entity.Polymer_type polypeptide(L) _Entity.Polymer_strand_ID B _Entity.Polymer_seq_one_letter_code ARTKQTARSTGGKA _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Number_of_monomers 14 _Entity.Paramagnetic no _Entity.Thiol_state "not present" _Entity.Parent_entity_ID 2 _Entity.Formula_weight 1436.6302 loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . ALA . rr_2rnw 2 2 . ARG . rr_2rnw 2 3 . THR . rr_2rnw 2 4 . LYS . rr_2rnw 2 5 . GLN . rr_2rnw 2 6 . THR . rr_2rnw 2 7 . ALA . rr_2rnw 2 8 . ARG . rr_2rnw 2 9 . SER . rr_2rnw 2 10 . THR . rr_2rnw 2 11 . GLY . rr_2rnw 2 12 . GLY . rr_2rnw 2 13 . LYS . rr_2rnw 2 14 . ALA . rr_2rnw 2 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . ALA 1 1 rr_2rnw 2 . ARG 2 2 rr_2rnw 2 . THR 3 3 rr_2rnw 2 . LYS 4 4 rr_2rnw 2 . GLN 5 5 rr_2rnw 2 . THR 6 6 rr_2rnw 2 . ALA 7 7 rr_2rnw 2 . ARG 8 8 rr_2rnw 2 . SER 9 9 rr_2rnw 2 . THR 10 10 rr_2rnw 2 . GLY 11 11 rr_2rnw 2 . GLY 12 12 rr_2rnw 2 . LYS 13 13 rr_2rnw 2 . ALA 14 14 rr_2rnw 2 stop_ save_ save_conformer_statistics _Conformer_stat_list.Sf_category conformer_statistics _Conformer_stat_list.Sf_framecode conformer_statistics _Conformer_stat_list.Entry_ID rr_2rnw _Conformer_stat_list.ID 1 _Conformer_stat_list.Conf_family_coord_set_ID 1 _Conformer_stat_list.Conf_family_coord_set_label $Original_constraints_and_structures _Conformer_stat_list.Conformer_submitted_total_num 20 save_ save_global_Org_file_characteristics _Constraint_stat_list.Sf_framecode global_Org_file_characteristics _Constraint_stat_list.Sf_category constraint_statistics _Constraint_stat_list.Entry_ID rr_2rnw _Constraint_stat_list.ID 1 loop_ _Constraint_file.ID _Constraint_file.Constraint_filename _Constraint_file.Software_ID _Constraint_file.Software_label _Constraint_file.Software_name _Constraint_file.Block_ID _Constraint_file.Constraint_type _Constraint_file.Constraint_subtype _Constraint_file.Constraint_subsubtype _Constraint_file.Constraint_number _Constraint_file.Entry_ID _Constraint_file.Constraint_stat_list_ID 1 2rnw.mr . . "MR format" 1 comment "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . NMRView 2 peak "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . NMRView 3 peak "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . NMRView 4 peak "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . NMRView 5 peak "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . NMRView 6 peak "Not applicable" "Not applicable" 0 rr_2rnw 1 1 2rnw.mr . . "MR format" 7 "nomenclature mapping" "Not applicable" "Not applicable" 0 rr_2rnw 1 stop_ save_ save_MR_file_comment_1 _Org_constr_file_comment.Sf_framecode MR_file_comment_1 _Org_constr_file_comment.Sf_category org_constr_file_comment _Org_constr_file_comment.Entry_ID rr_2rnw _Org_constr_file_comment.ID 1 _Org_constr_file_comment.Constraint_file_ID 1 _Org_constr_file_comment.Block_ID 1 _Org_constr_file_comment.Details "Generated by Wattos" _Org_constr_file_comment.Comment ; *HEADER TRANSFERASE/NUCLEAR PROTEIN 03-FEB-08 2RNW *TITLE THE STRUCTURAL BASIS FOR SITE-SPECIFIC LYSINE-ACETYLATED *TITLE 2 HISTONE RECOGNITION BY THE BROMODOMAINS OF THE HUMAN *TITLE 3 TRANSCRIPTIONAL CO-ACTIVATORS PCAF AND CBP *COMPND MOL_ID: 1; *COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE PCAF; *COMPND 3 CHAIN: A; *COMPND 4 FRAGMENT: UNP RESIDUES 719-832; *COMPND 5 SYNONYM: P300/CBP-ASSOCIATED FACTOR, P/CAF, HISTONE *COMPND 6 ACETYLASE PCAF; *COMPND 7 EC: 2.3.1.48; *COMPND 8 ENGINEERED: YES; *COMPND 9 MOL_ID: 2; *COMPND 10 MOLECULE: HISTONE H3; *COMPND 11 CHAIN: B; *COMPND 12 FRAGMENT: UNP RESIDUES 2-16; *COMPND 13 ENGINEERED: YES *SOURCE MOL_ID: 1; *SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; *SOURCE 3 ORGANISM_COMMON: HUMAN; *SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; *SOURCE 6 MOL_ID: 2; *SOURCE 7 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; *SOURCE 8 ORGANISM_COMMON: BAKER'S YEAST; *SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; *SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR *KEYWDS BROMODOMAIN, HISTONE, ACETYLTRANSFERASE, NMR, *KEYWDS 2 ACYLTRANSFERASE, CELL CYCLE, HOST-VIRUS INTERACTION, *KEYWDS 3 NUCLEUS, POLYMORPHISM, TRANSCRIPTION, TRANSCRIPTION *KEYWDS 4 REGULATION, ACETYLATION, CHROMOSOMAL PROTEIN, DNA DAMAGE, *KEYWDS 5 DNA REPAIR, DNA-BINDING, METHYLATION, NUCLEOSOME CORE, *KEYWDS 6 PHOSPHOPROTEIN, TRANSFERASE/NUCLEAR PROTEIN COMPLEX *EXPDTA NMR, 20 STRUCTURES *AUTHOR L.ZENG, Q.ZHANG, G.GERONA-NAVARRO, M.M.ZHOU *REVDAT 1 06-MAY-08 2RNW 0 ; save_