data_103D
# 
_entry.id   103D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.392 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   103D         pdb_0000103d 10.2210/pdb103d/pdb 
WWPDB D_1000170007 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1995-03-31 
2 'Structure model' 1 1 2008-03-24 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2022-02-16 
5 'Structure model' 1 4 2024-05-22 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Data collection'           
4 4 'Structure model' 'Database references'       
5 4 'Structure model' 'Derived calculations'      
6 4 'Structure model' Other                       
7 5 'Structure model' 'Data collection'           
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' database_2            
2 4 'Structure model' pdbx_database_status  
3 4 'Structure model' pdbx_nmr_software     
4 4 'Structure model' pdbx_struct_assembly  
5 4 'Structure model' pdbx_struct_oper_list 
6 5 'Structure model' chem_comp_atom        
7 5 'Structure model' chem_comp_bond        
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_database_2.pdbx_DOI'                
2 4 'Structure model' '_database_2.pdbx_database_accession' 
3 4 'Structure model' '_pdbx_database_status.process_site'  
4 4 'Structure model' '_pdbx_nmr_software.name'             
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        103D 
_pdbx_database_status.recvd_initial_deposition_date   1994-12-16 
_pdbx_database_status.deposit_site                    ? 
_pdbx_database_status.process_site                    BNL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Chou, S.-H.' 1 
'Zhu, L.'     2 
'Reid, B.R.'  3 
# 
_citation.id                        primary 
_citation.title                     
'The unusual structure of the human centromere (GGA)2 motif. Unpaired guanosine residues stacked between sheared G.A pairs.' 
_citation.journal_abbrev            J.Mol.Biol. 
_citation.journal_volume            244 
_citation.page_first                259 
_citation.page_last                 268 
_citation.year                      1994 
_citation.journal_id_ASTM           JMOBAK 
_citation.country                   UK 
_citation.journal_id_ISSN           0022-2836 
_citation.journal_id_CSD            0070 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   7966337 
_citation.pdbx_database_id_DOI      10.1006/jmbi.1994.1727 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Chou, S.H.' 1 ? 
primary 'Zhu, L.'    2 ? 
primary 'Reid, B.R.' 3 ? 
# 
_entity.id                         1 
_entity.type                       polymer 
_entity.src_method                 syn 
_entity.pdbx_description           
;DNA (5'-D(*GP*TP*GP*GP*AP*AP*TP*GP*GP*AP*AP*C)-3')
;
_entity.formula_weight             3751.466 
_entity.pdbx_number_of_molecules   2 
_entity.pdbx_ec                    ? 
_entity.pdbx_mutation              ? 
_entity.pdbx_fragment              ? 
_entity.details                    ? 
# 
_entity_keywords.entity_id   1 
_entity_keywords.text        'DEOXYRIBONUCLEIC ACID' 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DT)(DG)(DG)(DA)(DA)(DT)(DG)(DG)(DA)(DA)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GTGGAATGGAAC 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG n 
1 2  DT n 
1 3  DG n 
1 4  DG n 
1 5  DA n 
1 6  DA n 
1 7  DT n 
1 8  DG n 
1 9  DG n 
1 10 DA n 
1 11 DA n 
1 12 DC n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'CHEMICALLY SYNTHESIZED' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG 1  1  1  DG G A . n 
A 1 2  DT 2  2  2  DT T A . n 
A 1 3  DG 3  3  3  DG G A . n 
A 1 4  DG 4  4  4  DG G A . n 
A 1 5  DA 5  5  5  DA A A . n 
A 1 6  DA 6  6  6  DA A A . n 
A 1 7  DT 7  7  7  DT T A . n 
A 1 8  DG 8  8  8  DG G A . n 
A 1 9  DG 9  9  9  DG G A . n 
A 1 10 DA 10 10 10 DA A A . n 
A 1 11 DA 11 11 11 DA A A . n 
A 1 12 DC 12 12 12 DC C A . n 
B 1 1  DG 1  13 13 DG G B . n 
B 1 2  DT 2  14 14 DT T B . n 
B 1 3  DG 3  15 15 DG G B . n 
B 1 4  DG 4  16 16 DG G B . n 
B 1 5  DA 5  17 17 DA A B . n 
B 1 6  DA 6  18 18 DA A B . n 
B 1 7  DT 7  19 19 DT T B . n 
B 1 8  DG 8  20 20 DG G B . n 
B 1 9  DG 9  21 21 DG G B . n 
B 1 10 DA 10 22 22 DA A B . n 
B 1 11 DA 11 23 23 DA A B . n 
B 1 12 DC 12 24 24 DC C B . n 
# 
_software.name             AMBER 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
# 
_cell.entry_id           103D 
_cell.length_a           1.000 
_cell.length_b           1.000 
_cell.length_c           1.000 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              1 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         103D 
_symmetry.space_group_name_H-M             'P 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                1 
# 
_exptl.entry_id          103D 
_exptl.method            'SOLUTION NMR' 
_exptl.crystals_number   ? 
# 
_database_PDB_matrix.entry_id          103D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  103D 
_struct.title                     
'THE UNUSUAL STRUCTURE OF THE HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        103D 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            
'DNA, DOUBLE HELIX, G-G STACKING, G:A MISMATCH, HUMAN CENTROMERE REPEAT, GA-BRACKETED G-STACK MOTIF' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    103D 
_struct_ref.pdbx_db_accession          103D 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 103D A 1 ? 12 ? 103D 1  ? 12 ? 1  12 
2 1 103D B 1 ? 12 ? 103D 13 ? 24 ? 13 24 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DG 1  N1 ? ? ? 1_555 B DA 11 N1 ? ? A DG 1  B DA 23 1_555 ? ? ? ? ? ? TYPE_8_PAIR  ? ? ? 
hydrog2  hydrog ? ? A DG 1  O6 ? ? ? 1_555 B DA 11 N6 ? ? A DG 1  B DA 23 1_555 ? ? ? ? ? ? TYPE_8_PAIR  ? ? ? 
hydrog3  hydrog ? ? A DG 1  N1 ? ? ? 1_555 B DC 12 N3 ? ? A DG 1  B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DG 1  N2 ? ? ? 1_555 B DC 12 O2 ? ? A DG 1  B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DG 1  O6 ? ? ? 1_555 B DC 12 N4 ? ? A DG 1  B DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DT 2  O2 ? ? ? 1_555 B DA 10 N6 ? ? A DT 2  B DA 22 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? 
hydrog7  hydrog ? ? A DT 2  N3 ? ? ? 1_555 B DA 11 N1 ? ? A DT 2  B DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DT 2  O4 ? ? ? 1_555 B DA 11 N6 ? ? A DT 2  B DA 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DG 3  N2 ? ? ? 1_555 B DA 10 N7 ? ? A DG 3  B DA 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog10 hydrog ? ? A DG 3  N3 ? ? ? 1_555 B DA 10 N6 ? ? A DG 3  B DA 22 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog11 hydrog ? ? A DA 5  N6 ? ? ? 1_555 B DT 7  O2 ? ? A DA 5  B DT 19 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? 
hydrog12 hydrog ? ? A DA 5  N6 ? ? ? 1_555 B DG 8  N3 ? ? A DA 5  B DG 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog13 hydrog ? ? A DA 5  N7 ? ? ? 1_555 B DG 8  N2 ? ? A DA 5  B DG 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog14 hydrog ? ? A DA 6  N1 ? ? ? 1_555 B DT 7  N3 ? ? A DA 6  B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DA 6  N6 ? ? ? 1_555 B DT 7  O4 ? ? A DA 6  B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DT 7  O2 ? ? ? 1_555 B DA 5  N6 ? ? A DT 7  B DA 17 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? 
hydrog17 hydrog ? ? A DT 7  N3 ? ? ? 1_555 B DA 6  N1 ? ? A DT 7  B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DT 7  O4 ? ? ? 1_555 B DA 6  N6 ? ? A DT 7  B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DG 8  N2 ? ? ? 1_555 B DA 5  N7 ? ? A DG 8  B DA 17 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog20 hydrog ? ? A DG 8  N3 ? ? ? 1_555 B DA 5  N6 ? ? A DG 8  B DA 17 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog21 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 2  O2 ? ? A DA 10 B DT 14 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? 
hydrog22 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DG 3  N3 ? ? A DA 10 B DG 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog23 hydrog ? ? A DA 10 N7 ? ? ? 1_555 B DG 3  N2 ? ? A DA 10 B DG 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? 
hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DG 1  N1 ? ? A DA 11 B DG 13 1_555 ? ? ? ? ? ? TYPE_8_PAIR  ? ? ? 
hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DG 1  O6 ? ? A DA 11 B DG 13 1_555 ? ? ? ? ? ? TYPE_8_PAIR  ? ? ? 
hydrog26 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 2  N3 ? ? A DA 11 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 2  O4 ? ? A DA 11 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1  N1 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog29 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1  O6 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog30 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1  N2 ? ? A DC 12 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DG 1  ? ? "C1'" A DG 1  ? ? N9 A DG 1  ? ? 110.21 108.30 1.91 0.30 N 
2  1 "O4'" A DA 5  ? ? "C1'" A DA 5  ? ? N9 A DA 5  ? ? 111.39 108.30 3.09 0.30 N 
3  1 "O4'" A DA 6  ? ? "C1'" A DA 6  ? ? N9 A DA 6  ? ? 110.48 108.30 2.18 0.30 N 
4  1 "O4'" A DT 7  ? ? "C1'" A DT 7  ? ? N1 A DT 7  ? ? 110.81 108.30 2.51 0.30 N 
5  1 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9 A DA 10 ? ? 111.00 108.30 2.70 0.30 N 
6  1 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.33 108.30 2.03 0.30 N 
7  1 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1 A DC 12 ? ? 110.78 108.30 2.48 0.30 N 
8  1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.18 108.30 1.88 0.30 N 
9  1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 110.13 108.30 1.83 0.30 N 
10 1 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.37 108.30 3.07 0.30 N 
11 1 "O4'" B DA 18 ? ? "C1'" B DA 18 ? ? N9 B DA 18 ? ? 110.56 108.30 2.26 0.30 N 
12 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.79 108.30 2.49 0.30 N 
13 1 "O4'" B DA 22 ? ? "C1'" B DA 22 ? ? N9 B DA 22 ? ? 111.02 108.30 2.72 0.30 N 
14 1 "O4'" B DA 23 ? ? "C1'" B DA 23 ? ? N9 B DA 23 ? ? 110.20 108.30 1.90 0.30 N 
15 1 "O4'" B DC 24 ? ? "C1'" B DC 24 ? ? N1 B DC 24 ? ? 110.71 108.30 2.41 0.30 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DT A 2  ? ? 0.060 'SIDE CHAIN' 
2 1 DT B 14 ? ? 0.060 'SIDE CHAIN' 
# 
_pdbx_nmr_ensemble.entry_id                                      103D 
_pdbx_nmr_ensemble.conformers_calculated_total_number            ? 
_pdbx_nmr_ensemble.conformers_submitted_total_number             1 
_pdbx_nmr_ensemble.conformer_selection_criteria                  ? 
_pdbx_nmr_ensemble.average_constraints_per_residue               ? 
_pdbx_nmr_ensemble.average_constraint_violations_per_residue     ? 
_pdbx_nmr_ensemble.maximum_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.average_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.distance_constraint_violation_method          ? 
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method     ? 
# 
_pdbx_nmr_refine.entry_id           103D 
_pdbx_nmr_refine.method             ? 
_pdbx_nmr_refine.details            
;R VALUE 0.250 FINAL RMS COORD. SHIFT 0.65 ANGSTROMS NUMBER OF ATOMS USED IN REFINEMENT. NUMBER OF PROTEIN ATOMS 0 NUMBER OF NUCLEIC ACID ATOMS 772 NUMBER OF HETEROGEN ATOMS 0 NUMBER OF SOLVENT ATOMS 0. THE DUPLEX CONTAINS UNPAIRED STAGGERED GUANOSINE RESIDUES, WHICH CO-STACK BY INTERCALATION BETWEEN SHEARED G(DOT)A AND A(DOT)G BASE-PAIRS TO FORM AN INTERESTING NEW STRUCTURAL MOTIF, THE GA-BRACKETED G-STACK.  THE TGGAA REPEAT UNIT CONTAINS SIX "STEPS", FOUR OF WHICH ARE NOT WATSON-CRICK BASE-PAIRS.
;
_pdbx_nmr_refine.software_ordinal   1 
# 
_pdbx_nmr_software.name             Discover 
_pdbx_nmr_software.version          ? 
_pdbx_nmr_software.classification   refinement 
_pdbx_nmr_software.authors          'BIOSYM TECHNOLOGIES, INC.' 
_pdbx_nmr_software.ordinal          1 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA OP3    O N N 1   
DA P      P N N 2   
DA OP1    O N N 3   
DA OP2    O N N 4   
DA "O5'"  O N N 5   
DA "C5'"  C N N 6   
DA "C4'"  C N R 7   
DA "O4'"  O N N 8   
DA "C3'"  C N S 9   
DA "O3'"  O N N 10  
DA "C2'"  C N N 11  
DA "C1'"  C N R 12  
DA N9     N Y N 13  
DA C8     C Y N 14  
DA N7     N Y N 15  
DA C5     C Y N 16  
DA C6     C Y N 17  
DA N6     N N N 18  
DA N1     N Y N 19  
DA C2     C Y N 20  
DA N3     N Y N 21  
DA C4     C Y N 22  
DA HOP3   H N N 23  
DA HOP2   H N N 24  
DA "H5'"  H N N 25  
DA "H5''" H N N 26  
DA "H4'"  H N N 27  
DA "H3'"  H N N 28  
DA "HO3'" H N N 29  
DA "H2'"  H N N 30  
DA "H2''" H N N 31  
DA "H1'"  H N N 32  
DA H8     H N N 33  
DA H61    H N N 34  
DA H62    H N N 35  
DA H2     H N N 36  
DC OP3    O N N 37  
DC P      P N N 38  
DC OP1    O N N 39  
DC OP2    O N N 40  
DC "O5'"  O N N 41  
DC "C5'"  C N N 42  
DC "C4'"  C N R 43  
DC "O4'"  O N N 44  
DC "C3'"  C N S 45  
DC "O3'"  O N N 46  
DC "C2'"  C N N 47  
DC "C1'"  C N R 48  
DC N1     N N N 49  
DC C2     C N N 50  
DC O2     O N N 51  
DC N3     N N N 52  
DC C4     C N N 53  
DC N4     N N N 54  
DC C5     C N N 55  
DC C6     C N N 56  
DC HOP3   H N N 57  
DC HOP2   H N N 58  
DC "H5'"  H N N 59  
DC "H5''" H N N 60  
DC "H4'"  H N N 61  
DC "H3'"  H N N 62  
DC "HO3'" H N N 63  
DC "H2'"  H N N 64  
DC "H2''" H N N 65  
DC "H1'"  H N N 66  
DC H41    H N N 67  
DC H42    H N N 68  
DC H5     H N N 69  
DC H6     H N N 70  
DG OP3    O N N 71  
DG P      P N N 72  
DG OP1    O N N 73  
DG OP2    O N N 74  
DG "O5'"  O N N 75  
DG "C5'"  C N N 76  
DG "C4'"  C N R 77  
DG "O4'"  O N N 78  
DG "C3'"  C N S 79  
DG "O3'"  O N N 80  
DG "C2'"  C N N 81  
DG "C1'"  C N R 82  
DG N9     N Y N 83  
DG C8     C Y N 84  
DG N7     N Y N 85  
DG C5     C Y N 86  
DG C6     C N N 87  
DG O6     O N N 88  
DG N1     N N N 89  
DG C2     C N N 90  
DG N2     N N N 91  
DG N3     N N N 92  
DG C4     C Y N 93  
DG HOP3   H N N 94  
DG HOP2   H N N 95  
DG "H5'"  H N N 96  
DG "H5''" H N N 97  
DG "H4'"  H N N 98  
DG "H3'"  H N N 99  
DG "HO3'" H N N 100 
DG "H2'"  H N N 101 
DG "H2''" H N N 102 
DG "H1'"  H N N 103 
DG H8     H N N 104 
DG H1     H N N 105 
DG H21    H N N 106 
DG H22    H N N 107 
DT OP3    O N N 108 
DT P      P N N 109 
DT OP1    O N N 110 
DT OP2    O N N 111 
DT "O5'"  O N N 112 
DT "C5'"  C N N 113 
DT "C4'"  C N R 114 
DT "O4'"  O N N 115 
DT "C3'"  C N S 116 
DT "O3'"  O N N 117 
DT "C2'"  C N N 118 
DT "C1'"  C N R 119 
DT N1     N N N 120 
DT C2     C N N 121 
DT O2     O N N 122 
DT N3     N N N 123 
DT C4     C N N 124 
DT O4     O N N 125 
DT C5     C N N 126 
DT C7     C N N 127 
DT C6     C N N 128 
DT HOP3   H N N 129 
DT HOP2   H N N 130 
DT "H5'"  H N N 131 
DT "H5''" H N N 132 
DT "H4'"  H N N 133 
DT "H3'"  H N N 134 
DT "HO3'" H N N 135 
DT "H2'"  H N N 136 
DT "H2''" H N N 137 
DT "H1'"  H N N 138 
DT H3     H N N 139 
DT H71    H N N 140 
DT H72    H N N 141 
DT H73    H N N 142 
DT H6     H N N 143 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA OP3   P      sing N N 1   
DA OP3   HOP3   sing N N 2   
DA P     OP1    doub N N 3   
DA P     OP2    sing N N 4   
DA P     "O5'"  sing N N 5   
DA OP2   HOP2   sing N N 6   
DA "O5'" "C5'"  sing N N 7   
DA "C5'" "C4'"  sing N N 8   
DA "C5'" "H5'"  sing N N 9   
DA "C5'" "H5''" sing N N 10  
DA "C4'" "O4'"  sing N N 11  
DA "C4'" "C3'"  sing N N 12  
DA "C4'" "H4'"  sing N N 13  
DA "O4'" "C1'"  sing N N 14  
DA "C3'" "O3'"  sing N N 15  
DA "C3'" "C2'"  sing N N 16  
DA "C3'" "H3'"  sing N N 17  
DA "O3'" "HO3'" sing N N 18  
DA "C2'" "C1'"  sing N N 19  
DA "C2'" "H2'"  sing N N 20  
DA "C2'" "H2''" sing N N 21  
DA "C1'" N9     sing N N 22  
DA "C1'" "H1'"  sing N N 23  
DA N9    C8     sing Y N 24  
DA N9    C4     sing Y N 25  
DA C8    N7     doub Y N 26  
DA C8    H8     sing N N 27  
DA N7    C5     sing Y N 28  
DA C5    C6     sing Y N 29  
DA C5    C4     doub Y N 30  
DA C6    N6     sing N N 31  
DA C6    N1     doub Y N 32  
DA N6    H61    sing N N 33  
DA N6    H62    sing N N 34  
DA N1    C2     sing Y N 35  
DA C2    N3     doub Y N 36  
DA C2    H2     sing N N 37  
DA N3    C4     sing Y N 38  
DC OP3   P      sing N N 39  
DC OP3   HOP3   sing N N 40  
DC P     OP1    doub N N 41  
DC P     OP2    sing N N 42  
DC P     "O5'"  sing N N 43  
DC OP2   HOP2   sing N N 44  
DC "O5'" "C5'"  sing N N 45  
DC "C5'" "C4'"  sing N N 46  
DC "C5'" "H5'"  sing N N 47  
DC "C5'" "H5''" sing N N 48  
DC "C4'" "O4'"  sing N N 49  
DC "C4'" "C3'"  sing N N 50  
DC "C4'" "H4'"  sing N N 51  
DC "O4'" "C1'"  sing N N 52  
DC "C3'" "O3'"  sing N N 53  
DC "C3'" "C2'"  sing N N 54  
DC "C3'" "H3'"  sing N N 55  
DC "O3'" "HO3'" sing N N 56  
DC "C2'" "C1'"  sing N N 57  
DC "C2'" "H2'"  sing N N 58  
DC "C2'" "H2''" sing N N 59  
DC "C1'" N1     sing N N 60  
DC "C1'" "H1'"  sing N N 61  
DC N1    C2     sing N N 62  
DC N1    C6     sing N N 63  
DC C2    O2     doub N N 64  
DC C2    N3     sing N N 65  
DC N3    C4     doub N N 66  
DC C4    N4     sing N N 67  
DC C4    C5     sing N N 68  
DC N4    H41    sing N N 69  
DC N4    H42    sing N N 70  
DC C5    C6     doub N N 71  
DC C5    H5     sing N N 72  
DC C6    H6     sing N N 73  
DG OP3   P      sing N N 74  
DG OP3   HOP3   sing N N 75  
DG P     OP1    doub N N 76  
DG P     OP2    sing N N 77  
DG P     "O5'"  sing N N 78  
DG OP2   HOP2   sing N N 79  
DG "O5'" "C5'"  sing N N 80  
DG "C5'" "C4'"  sing N N 81  
DG "C5'" "H5'"  sing N N 82  
DG "C5'" "H5''" sing N N 83  
DG "C4'" "O4'"  sing N N 84  
DG "C4'" "C3'"  sing N N 85  
DG "C4'" "H4'"  sing N N 86  
DG "O4'" "C1'"  sing N N 87  
DG "C3'" "O3'"  sing N N 88  
DG "C3'" "C2'"  sing N N 89  
DG "C3'" "H3'"  sing N N 90  
DG "O3'" "HO3'" sing N N 91  
DG "C2'" "C1'"  sing N N 92  
DG "C2'" "H2'"  sing N N 93  
DG "C2'" "H2''" sing N N 94  
DG "C1'" N9     sing N N 95  
DG "C1'" "H1'"  sing N N 96  
DG N9    C8     sing Y N 97  
DG N9    C4     sing Y N 98  
DG C8    N7     doub Y N 99  
DG C8    H8     sing N N 100 
DG N7    C5     sing Y N 101 
DG C5    C6     sing N N 102 
DG C5    C4     doub Y N 103 
DG C6    O6     doub N N 104 
DG C6    N1     sing N N 105 
DG N1    C2     sing N N 106 
DG N1    H1     sing N N 107 
DG C2    N2     sing N N 108 
DG C2    N3     doub N N 109 
DG N2    H21    sing N N 110 
DG N2    H22    sing N N 111 
DG N3    C4     sing N N 112 
DT OP3   P      sing N N 113 
DT OP3   HOP3   sing N N 114 
DT P     OP1    doub N N 115 
DT P     OP2    sing N N 116 
DT P     "O5'"  sing N N 117 
DT OP2   HOP2   sing N N 118 
DT "O5'" "C5'"  sing N N 119 
DT "C5'" "C4'"  sing N N 120 
DT "C5'" "H5'"  sing N N 121 
DT "C5'" "H5''" sing N N 122 
DT "C4'" "O4'"  sing N N 123 
DT "C4'" "C3'"  sing N N 124 
DT "C4'" "H4'"  sing N N 125 
DT "O4'" "C1'"  sing N N 126 
DT "C3'" "O3'"  sing N N 127 
DT "C3'" "C2'"  sing N N 128 
DT "C3'" "H3'"  sing N N 129 
DT "O3'" "HO3'" sing N N 130 
DT "C2'" "C1'"  sing N N 131 
DT "C2'" "H2'"  sing N N 132 
DT "C2'" "H2''" sing N N 133 
DT "C1'" N1     sing N N 134 
DT "C1'" "H1'"  sing N N 135 
DT N1    C2     sing N N 136 
DT N1    C6     sing N N 137 
DT C2    O2     doub N N 138 
DT C2    N3     sing N N 139 
DT N3    C4     sing N N 140 
DT N3    H3     sing N N 141 
DT C4    O4     doub N N 142 
DT C4    C5     sing N N 143 
DT C5    C7     sing N N 144 
DT C5    C6     doub N N 145 
DT C7    H71    sing N N 146 
DT C7    H72    sing N N 147 
DT C7    H73    sing N N 148 
DT C6    H6     sing N N 149 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
103D 'double helix'         
103D 'mismatched base pair' 
103D 'triple helix'         
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 1  1_555 B DC 12 1_555 -0.698 -0.295 0.667 -7.334  8.154   0.964  1  A_DG1:DC24_B  A 1  ? B 24 ? 19 1 
1 A DT 2  1_555 B DA 11 1_555 0.276  -0.133 0.438 9.532   8.232   0.790  2  A_DT2:DA23_B  A 2  ? B 23 ? 20 1 
1 A DG 3  1_555 B DA 10 1_555 6.401  -4.264 1.175 27.084  -15.358 8.790  3  A_DG3:DA22_B  A 3  ? B 22 ? 11 9 
1 A DA 5  1_555 B DG 8  1_555 -6.364 -4.238 1.211 -29.347 -14.928 10.022 4  A_DA5:DG20_B  A 5  ? B 20 ? 11 9 
1 A DA 6  1_555 B DT 7  1_555 -0.225 -0.110 0.424 -10.770 10.139  0.687  5  A_DA6:DT19_B  A 6  ? B 19 ? 20 1 
1 A DT 7  1_555 B DA 6  1_555 0.218  -0.108 0.422 11.216  10.159  0.730  6  A_DT7:DA18_B  A 7  ? B 18 ? 20 1 
1 A DG 8  1_555 B DA 5  1_555 6.363  -4.240 1.212 29.274  -15.268 10.065 7  A_DG8:DA17_B  A 8  ? B 17 ? 11 9 
1 A DA 10 1_555 B DG 3  1_555 -6.396 -4.257 1.180 -27.086 -15.353 9.020  8  A_DA10:DG15_B A 10 ? B 15 ? 11 9 
1 A DA 11 1_555 B DT 2  1_555 -0.277 -0.136 0.448 -9.672  8.457   0.906  9  A_DA11:DT14_B A 11 ? B 14 ? 20 1 
1 A DC 12 1_555 B DG 1  1_555 0.701  -0.300 0.672 7.360   8.691   1.155  10 A_DC12:DG13_B A 12 ? B 13 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 1  1_555 B DC 12 1_555 A DT 2  1_555 B DA 11 1_555 -0.042 -0.639 2.955 3.390  -0.207 35.187 -1.025 0.521  2.942 -0.341 
-5.591 35.345 1 AA_DG1DT2:DA23DC24_BB   A 1  ? B 24 ? A 2  ? B 23 ? 
1 A DT 2  1_555 B DA 11 1_555 A DG 3  1_555 B DA 10 1_555 0.270  1.321  2.930 2.693  4.658  58.657 1.125  -0.149 3.027 4.744  
-2.743 58.882 2 AA_DT2DG3:DA22DA23_BB   A 2  ? B 23 ? A 3  ? B 22 ? 
1 A DA 5  1_555 B DG 8  1_555 A DA 6  1_555 B DT 7  1_555 -0.377 1.185  2.934 -3.372 5.833  58.976 0.927  0.225  3.044 5.903  
3.413  59.325 3 AA_DA5DA6:DT19DG20_BB   A 5  ? B 20 ? A 6  ? B 19 ? 
1 A DA 6  1_555 B DT 7  1_555 A DT 7  1_555 B DA 6  1_555 0.004  -0.456 2.900 -0.083 2.341  32.747 -1.160 -0.020 2.862 4.145  
0.147  32.828 4 AA_DA6DT7:DA18DT19_BB   A 6  ? B 19 ? A 7  ? B 18 ? 
1 A DT 7  1_555 B DA 6  1_555 A DG 8  1_555 B DA 5  1_555 0.365  1.170  2.944 3.381  6.033  58.793 0.902  -0.212 3.055 6.122  
-3.431 59.162 5 AA_DT7DG8:DA17DA18_BB   A 7  ? B 18 ? A 8  ? B 17 ? 
1 A DA 10 1_555 B DG 3  1_555 A DA 11 1_555 B DT 2  1_555 -0.257 1.293  2.928 -2.819 4.846  58.353 1.091  0.128  3.026 4.958  
2.884  58.598 6 AA_DA10DA11:DT14DG15_BB A 10 ? B 15 ? A 11 ? B 14 ? 
1 A DA 11 1_555 B DT 2  1_555 A DC 12 1_555 B DG 1  1_555 0.047  -0.669 2.953 -3.300 -0.058 34.960 -1.101 -0.523 2.937 -0.096 
5.478  35.111 7 AA_DA11DC12:DG13DT14_BB A 11 ? B 14 ? A 12 ? B 13 ? 
# 
_atom_sites.entry_id                    103D 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_