data_10MH # _entry.id 10MH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 10MH pdb_000010mh 10.2210/pdb10mh/pdb NDB PD0034 ? ? RCSB RCSB008103 ? ? WWPDB D_1000008103 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 10MH _pdbx_database_status.recvd_initial_deposition_date 1998-08-10 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sheikhnejad, G.' 1 'Brank, A.' 2 'Christman, J.K.' 3 'Goddard, A.' 4 'Alvarez, E.' 5 'Ford Junior, H.' 6 'Marquez, V.E.' 7 'Marasco, C.J.' 8 'Sufrin, J.R.' 9 ;O'Gara, M. ; 10 'Cheng, X.' 11 # _citation.id primary _citation.title 'Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 285 _citation.page_first 2021 _citation.page_last 2034 _citation.year 1999 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9925782 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.2426 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sheikhnejad, G.' 1 ? primary 'Brank, A.' 2 ? primary 'Christman, J.K.' 3 ? primary 'Goddard, A.' 4 ? primary 'Alvarez, E.' 5 ? primary 'Ford Jr., H.' 6 ? primary 'Marquez, V.E.' 7 ? primary 'Marasco, C.J.' 8 ? primary 'Sufrin, J.R.' 9 ? primary ;O'gara, M. ; 10 ? primary 'Cheng, X.' 11 ? # _cell.entry_id 10MH _cell.length_a 99.860 _cell.length_b 99.860 _cell.length_c 325.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 10MH _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3') ; 3637.395 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*AP*GP*5NCP*GP*CP*AP*TP*GP*G)-3') ; 3704.404 1 ? ? ? ? 3 polymer man 'PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI)' 37042.207 1 2.1.1.73 ? ? ? 4 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 5 water nat water 18.015 129 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'MODIFICATION METHYLASE HHAI, M.HHAI' # _entity_name_sys.entity_id 3 _entity_name_sys.name 'E.C 2.1.1.73' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DA)(DT)(DG)(5CM)(DG)(DC)(DT)(DG)(DA)(DC)' CCATGCGCTGAC B ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DC)(DA)(DG)(5NC)(DG)(DC)(DA)(DT)(DG)(DG)' GTCAGCGCATGG C ? 3 'polypeptide(L)' no no ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; ;MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFP CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIP QKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGER IYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSYKVHPSTSQAYKQFGNSVVINVLQYIAYNIGS SLNFKPY ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DT n 1 5 DG n 1 6 5CM n 1 7 DG n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DA n 1 12 DC n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 5NC n 2 7 DG n 2 8 DC n 2 9 DA n 2 10 DT n 2 11 DG n 2 12 DG n 3 1 MET n 3 2 ILE n 3 3 GLU n 3 4 ILE n 3 5 LYS n 3 6 ASP n 3 7 LYS n 3 8 GLN n 3 9 LEU n 3 10 THR n 3 11 GLY n 3 12 LEU n 3 13 ARG n 3 14 PHE n 3 15 ILE n 3 16 ASP n 3 17 LEU n 3 18 PHE n 3 19 ALA n 3 20 GLY n 3 21 LEU n 3 22 GLY n 3 23 GLY n 3 24 PHE n 3 25 ARG n 3 26 LEU n 3 27 ALA n 3 28 LEU n 3 29 GLU n 3 30 SER n 3 31 CYS n 3 32 GLY n 3 33 ALA n 3 34 GLU n 3 35 CYS n 3 36 VAL n 3 37 TYR n 3 38 SER n 3 39 ASN n 3 40 GLU n 3 41 TRP n 3 42 ASP n 3 43 LYS n 3 44 TYR n 3 45 ALA n 3 46 GLN n 3 47 GLU n 3 48 VAL n 3 49 TYR n 3 50 GLU n 3 51 MET n 3 52 ASN n 3 53 PHE n 3 54 GLY n 3 55 GLU n 3 56 LYS n 3 57 PRO n 3 58 GLU n 3 59 GLY n 3 60 ASP n 3 61 ILE n 3 62 THR n 3 63 GLN n 3 64 VAL n 3 65 ASN n 3 66 GLU n 3 67 LYS n 3 68 THR n 3 69 ILE n 3 70 PRO n 3 71 ASP n 3 72 HIS n 3 73 ASP n 3 74 ILE n 3 75 LEU n 3 76 CYS n 3 77 ALA n 3 78 GLY n 3 79 PHE n 3 80 PRO n 3 81 CYS n 3 82 GLN n 3 83 ALA n 3 84 PHE n 3 85 SER n 3 86 ILE n 3 87 SER n 3 88 GLY n 3 89 LYS n 3 90 GLN n 3 91 LYS n 3 92 GLY n 3 93 PHE n 3 94 GLU n 3 95 ASP n 3 96 SER n 3 97 ARG n 3 98 GLY n 3 99 THR n 3 100 LEU n 3 101 PHE n 3 102 PHE n 3 103 ASP n 3 104 ILE n 3 105 ALA n 3 106 ARG n 3 107 ILE n 3 108 VAL n 3 109 ARG n 3 110 GLU n 3 111 LYS n 3 112 LYS n 3 113 PRO n 3 114 LYS n 3 115 VAL n 3 116 VAL n 3 117 PHE n 3 118 MET n 3 119 GLU n 3 120 ASN n 3 121 VAL n 3 122 LYS n 3 123 ASN n 3 124 PHE n 3 125 ALA n 3 126 SER n 3 127 HIS n 3 128 ASP n 3 129 ASN n 3 130 GLY n 3 131 ASN n 3 132 THR n 3 133 LEU n 3 134 GLU n 3 135 VAL n 3 136 VAL n 3 137 LYS n 3 138 ASN n 3 139 THR n 3 140 MET n 3 141 ASN n 3 142 GLU n 3 143 LEU n 3 144 ASP n 3 145 TYR n 3 146 SER n 3 147 PHE n 3 148 HIS n 3 149 ALA n 3 150 LYS n 3 151 VAL n 3 152 LEU n 3 153 ASN n 3 154 ALA n 3 155 LEU n 3 156 ASP n 3 157 TYR n 3 158 GLY n 3 159 ILE n 3 160 PRO n 3 161 GLN n 3 162 LYS n 3 163 ARG n 3 164 GLU n 3 165 ARG n 3 166 ILE n 3 167 TYR n 3 168 MET n 3 169 ILE n 3 170 CYS n 3 171 PHE n 3 172 ARG n 3 173 ASN n 3 174 ASP n 3 175 LEU n 3 176 ASN n 3 177 ILE n 3 178 GLN n 3 179 ASN n 3 180 PHE n 3 181 GLN n 3 182 PHE n 3 183 PRO n 3 184 LYS n 3 185 PRO n 3 186 PHE n 3 187 GLU n 3 188 LEU n 3 189 ASN n 3 190 THR n 3 191 PHE n 3 192 VAL n 3 193 LYS n 3 194 ASP n 3 195 LEU n 3 196 LEU n 3 197 LEU n 3 198 PRO n 3 199 ASP n 3 200 SER n 3 201 GLU n 3 202 VAL n 3 203 GLU n 3 204 HIS n 3 205 LEU n 3 206 VAL n 3 207 ILE n 3 208 ASP n 3 209 ARG n 3 210 LYS n 3 211 ASP n 3 212 LEU n 3 213 VAL n 3 214 MET n 3 215 THR n 3 216 ASN n 3 217 GLN n 3 218 GLU n 3 219 ILE n 3 220 GLU n 3 221 GLN n 3 222 THR n 3 223 THR n 3 224 PRO n 3 225 LYS n 3 226 THR n 3 227 VAL n 3 228 ARG n 3 229 LEU n 3 230 GLY n 3 231 ILE n 3 232 VAL n 3 233 GLY n 3 234 LYS n 3 235 GLY n 3 236 GLY n 3 237 GLN n 3 238 GLY n 3 239 GLU n 3 240 ARG n 3 241 ILE n 3 242 TYR n 3 243 SER n 3 244 THR n 3 245 ARG n 3 246 GLY n 3 247 ILE n 3 248 ALA n 3 249 ILE n 3 250 THR n 3 251 LEU n 3 252 SER n 3 253 ALA n 3 254 TYR n 3 255 GLY n 3 256 GLY n 3 257 GLY n 3 258 ILE n 3 259 PHE n 3 260 ALA n 3 261 LYS n 3 262 THR n 3 263 GLY n 3 264 GLY n 3 265 TYR n 3 266 LEU n 3 267 VAL n 3 268 ASN n 3 269 GLY n 3 270 LYS n 3 271 THR n 3 272 ARG n 3 273 LYS n 3 274 LEU n 3 275 HIS n 3 276 PRO n 3 277 ARG n 3 278 GLU n 3 279 CYS n 3 280 ALA n 3 281 ARG n 3 282 VAL n 3 283 MET n 3 284 GLY n 3 285 TYR n 3 286 PRO n 3 287 ASP n 3 288 SER n 3 289 TYR n 3 290 LYS n 3 291 VAL n 3 292 HIS n 3 293 PRO n 3 294 SER n 3 295 THR n 3 296 SER n 3 297 GLN n 3 298 ALA n 3 299 TYR n 3 300 LYS n 3 301 GLN n 3 302 PHE n 3 303 GLY n 3 304 ASN n 3 305 SER n 3 306 VAL n 3 307 VAL n 3 308 ILE n 3 309 ASN n 3 310 VAL n 3 311 LEU n 3 312 GLN n 3 313 TYR n 3 314 ILE n 3 315 ALA n 3 316 TYR n 3 317 ASN n 3 318 ILE n 3 319 GLY n 3 320 SER n 3 321 SER n 3 322 LEU n 3 323 ASN n 3 324 PHE n 3 325 LYS n 3 326 PRO n 3 327 TYR n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus haemolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 726 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP MTH1_HAEHA 3 ? ? P05102 ? 2 PDB 10MH 1 ? ? 10MH ? 3 PDB 10MH 2 ? ? 10MH ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 10MH A 1 ? 327 ? P05102 1 ? 327 ? 1 327 2 2 10MH B 1 ? 12 ? 10MH 402 ? 413 ? 402 413 3 3 10MH C 1 ? 12 ? 10MH 422 ? 433 ? 422 433 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 5NC 'DNA linking' n "5-AZA-CYTIDINE-5'MONOPHOSPHATE" ? 'C8 H13 N4 O7 P' 308.185 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 10MH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.03 _exptl_crystal.density_Matthews 3.52 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '10% (W/V) PEG 8000 50 MM CALCIUM ACETATE 50 MM SODIUM CACODYLATE PH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1996-09-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.15 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.15 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 10MH _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 15976 _reflns.number_all ? _reflns.percent_possible_obs 77.2 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.23 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.54 _reflns_shell.percent_possible_all 50.2 _reflns_shell.Rmerge_I_obs 0.275 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.89 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 10MH _refine.ls_number_reflns_obs 15965 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.3 _refine.ls_d_res_high 2.55 _refine.ls_percent_reflns_obs 76.6 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 5MHT' _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2606 _refine_hist.pdbx_number_atoms_nucleic_acid 492 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 129 _refine_hist.number_atoms_total 3254 _refine_hist.d_res_high 2.55 _refine_hist.d_res_low 29.3 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.6 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.55 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 1311 _refine_ls_shell.R_factor_R_work 0.32 _refine_ls_shell.percent_reflns_obs 51.5 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 10MH _struct.title 'TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 10MH _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'TRANSFERASE, METHYLTRANSFERASE, RESTRICTION SYSTEM, COMPLEX (METHYLTRANSFERASE- DNA), TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY C 23 ? GLU C 29 ? GLY A 23 GLU A 29 1 ? 7 HELX_P HELX_P2 2 LYS C 43 ? PHE C 53 ? LYS A 43 PHE A 53 1 ? 11 HELX_P HELX_P3 3 ILE C 61 ? GLN C 63 ? ILE A 61 GLN A 63 5 ? 3 HELX_P HELX_P4 4 GLY C 92 ? GLU C 94 ? GLY A 92 GLU A 94 5 ? 3 HELX_P HELX_P5 5 LEU C 100 ? LYS C 111 ? LEU A 100 LYS A 111 5 ? 12 HELX_P HELX_P6 6 LYS C 122 ? ALA C 125 ? LYS A 122 ALA A 125 5 ? 4 HELX_P HELX_P7 7 HIS C 127 ? GLU C 142 ? HIS A 127 GLU A 142 5 ? 16 HELX_P HELX_P8 8 ALA C 154 ? ASP C 156 ? ALA A 154 ASP A 156 5 ? 3 HELX_P HELX_P9 9 ASN C 173 ? LEU C 175 ? ASN A 173 LEU A 175 5 ? 3 HELX_P HELX_P10 10 VAL C 192 ? ASP C 194 ? VAL A 192 ASP A 194 5 ? 3 HELX_P HELX_P11 11 ASP C 199 ? GLU C 201 ? ASP A 199 GLU A 201 5 ? 3 HELX_P HELX_P12 12 GLU C 203 ? LEU C 205 ? GLU A 203 LEU A 205 5 ? 3 HELX_P HELX_P13 13 PRO C 276 ? MET C 283 ? PRO A 276 MET A 283 1 ? 8 HELX_P HELX_P14 14 THR C 295 ? ASN C 304 ? THR A 295 ASN A 304 1 ? 10 HELX_P HELX_P15 15 ILE C 308 ? LEU C 322 ? ILE A 308 LEU A 322 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 5 "O3'" ? ? ? 1_555 A 5CM 6 P ? ? B DG 406 B 5CM 407 1_555 ? ? ? ? ? ? ? 1.664 ? ? covale2 covale both ? A 5CM 6 "O3'" ? ? ? 1_555 A DG 7 P ? ? B 5CM 407 B DG 408 1_555 ? ? ? ? ? ? ? 1.627 ? ? covale3 covale both ? B DG 5 "O3'" ? ? ? 1_555 B 5NC 6 P ? ? C DG 426 C 5NC 427 1_555 ? ? ? ? ? ? ? 1.636 ? ? covale4 covale one ? B 5NC 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? C 5NC 427 C DG 428 1_555 ? ? ? ? ? ? ? 1.618 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 402 C DG 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 402 C DG 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 402 C DG 433 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 11 N1 ? ? B DC 403 C DG 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 11 O6 ? ? B DC 403 C DG 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 11 N2 ? ? B DC 403 C DG 432 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 404 C DT 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 404 C DT 431 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 9 N1 ? ? B DT 405 C DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 9 N6 ? ? B DT 405 C DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 406 C DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 406 C DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 406 C DC 429 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A 5CM 6 N3 ? ? ? 1_555 B DG 7 N1 ? ? B 5CM 407 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A 5CM 6 N4 ? ? ? 1_555 B DG 7 O6 ? ? B 5CM 407 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A 5CM 6 O2 ? ? ? 1_555 B DG 7 N2 ? ? B 5CM 407 C DG 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 409 C DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 409 C DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 409 C DG 426 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 4 N1 ? ? B DT 410 C DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 4 N6 ? ? B DT 410 C DA 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? B DG 411 C DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? B DG 411 C DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? B DG 411 C DC 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 2 N3 ? ? B DA 412 C DT 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 2 O4 ? ? B DA 412 C DT 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 1 N1 ? ? B DC 413 C DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 1 O6 ? ? B DC 413 C DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 1 N2 ? ? B DC 413 C DG 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE C 14 ? LEU C 17 ? PHE A 14 LEU A 17 A 2 ILE C 74 ? GLY C 78 ? ILE A 74 GLY A 78 A 3 VAL C 115 ? VAL C 121 ? VAL A 115 VAL A 121 A 4 GLU C 164 ? PHE C 171 ? GLU A 164 PHE A 171 A 5 HIS C 148 ? ASN C 153 ? HIS A 148 ASN A 153 B 1 LYS C 270 ? ARG C 272 ? LYS A 270 ARG A 272 B 2 GLY C 264 ? VAL C 267 ? GLY A 264 VAL A 267 B 3 ARG C 240 ? SER C 243 ? ARG A 240 SER A 243 B 4 ARG C 228 ? ILE C 231 ? ARG A 228 ILE A 231 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 15 ? O ILE A 15 N ILE C 74 ? N ILE A 74 A 2 3 O LEU C 75 ? O LEU A 75 N VAL C 115 ? N VAL A 115 A 3 4 O VAL C 116 ? O VAL A 116 N CYS C 170 ? N CYS A 170 A 4 5 O ARG C 165 ? O ARG A 165 N LEU C 152 ? N LEU A 152 B 1 2 O LYS C 270 ? O LYS A 270 N VAL C 267 ? N VAL A 267 B 2 3 O GLY C 264 ? O GLY A 264 N TYR C 242 ? N TYR A 242 B 3 4 O ILE C 241 ? O ILE A 241 N GLY C 230 ? N GLY A 230 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SAH _struct_site.pdbx_auth_seq_id 328 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 18 _struct_site.details 'BINDING SITE FOR RESIDUE SAH A 328' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 PHE C 18 ? PHE A 18 . ? 1_555 ? 2 AC1 18 ALA C 19 ? ALA A 19 . ? 1_555 ? 3 AC1 18 GLY C 20 ? GLY A 20 . ? 1_555 ? 4 AC1 18 LEU C 21 ? LEU A 21 . ? 1_555 ? 5 AC1 18 GLY C 23 ? GLY A 23 . ? 1_555 ? 6 AC1 18 ASN C 39 ? ASN A 39 . ? 1_555 ? 7 AC1 18 GLU C 40 ? GLU A 40 . ? 1_555 ? 8 AC1 18 TRP C 41 ? TRP A 41 . ? 1_555 ? 9 AC1 18 ASP C 60 ? ASP A 60 . ? 1_555 ? 10 AC1 18 ILE C 61 ? ILE A 61 . ? 1_555 ? 11 AC1 18 GLY C 78 ? GLY A 78 . ? 1_555 ? 12 AC1 18 ASN C 304 ? ASN A 304 . ? 1_555 ? 13 AC1 18 SER C 305 ? SER A 305 . ? 1_555 ? 14 AC1 18 VAL C 306 ? VAL A 306 . ? 1_555 ? 15 AC1 18 HOH G . ? HOH A 338 . ? 1_555 ? 16 AC1 18 HOH G . ? HOH A 340 . ? 1_555 ? 17 AC1 18 HOH G . ? HOH A 384 . ? 1_555 ? 18 AC1 18 HOH G . ? HOH A 451 . ? 1_555 ? # _database_PDB_matrix.entry_id 10MH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 10MH _atom_sites.fract_transf_matrix[1][1] 0.010014 _atom_sites.fract_transf_matrix[1][2] 0.005781 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011563 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003075 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 402 402 DC C B . n A 1 2 DC 2 403 403 DC C B . n A 1 3 DA 3 404 404 DA A B . n A 1 4 DT 4 405 405 DT T B . n A 1 5 DG 5 406 406 DG G B . n A 1 6 5CM 6 407 407 5CM +C B . n A 1 7 DG 7 408 408 DG G B . n A 1 8 DC 8 409 409 DC C B . n A 1 9 DT 9 410 410 DT T B . n A 1 10 DG 10 411 411 DG G B . n A 1 11 DA 11 412 412 DA A B . n A 1 12 DC 12 413 413 DC C B . n B 2 1 DG 1 422 422 DG G C . n B 2 2 DT 2 423 423 DT T C . n B 2 3 DC 3 424 424 DC C C . n B 2 4 DA 4 425 425 DA A C . n B 2 5 DG 5 426 426 DG G C . n B 2 6 5NC 6 427 427 5NC 5NC C . n B 2 7 DG 7 428 428 DG G C . n B 2 8 DC 8 429 429 DC C C . n B 2 9 DA 9 430 430 DA A C . n B 2 10 DT 10 431 431 DT T C . n B 2 11 DG 11 432 432 DG G C . n B 2 12 DG 12 433 433 DG G C . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 ILE 2 2 2 ILE ILE A . n C 3 3 GLU 3 3 3 GLU GLU A . n C 3 4 ILE 4 4 4 ILE ILE A . n C 3 5 LYS 5 5 5 LYS LYS A . n C 3 6 ASP 6 6 6 ASP ASP A . n C 3 7 LYS 7 7 7 LYS LYS A . n C 3 8 GLN 8 8 8 GLN GLN A . n C 3 9 LEU 9 9 9 LEU LEU A . n C 3 10 THR 10 10 10 THR THR A . n C 3 11 GLY 11 11 11 GLY GLY A . n C 3 12 LEU 12 12 12 LEU LEU A . n C 3 13 ARG 13 13 13 ARG ARG A . n C 3 14 PHE 14 14 14 PHE PHE A . n C 3 15 ILE 15 15 15 ILE ILE A . n C 3 16 ASP 16 16 16 ASP ASP A . n C 3 17 LEU 17 17 17 LEU LEU A . n C 3 18 PHE 18 18 18 PHE PHE A . n C 3 19 ALA 19 19 19 ALA ALA A . n C 3 20 GLY 20 20 20 GLY GLY A . n C 3 21 LEU 21 21 21 LEU LEU A . n C 3 22 GLY 22 22 22 GLY GLY A . n C 3 23 GLY 23 23 23 GLY GLY A . n C 3 24 PHE 24 24 24 PHE PHE A . n C 3 25 ARG 25 25 25 ARG ARG A . n C 3 26 LEU 26 26 26 LEU LEU A . n C 3 27 ALA 27 27 27 ALA ALA A . n C 3 28 LEU 28 28 28 LEU LEU A . n C 3 29 GLU 29 29 29 GLU GLU A . n C 3 30 SER 30 30 30 SER SER A . n C 3 31 CYS 31 31 31 CYS CYS A . n C 3 32 GLY 32 32 32 GLY GLY A . n C 3 33 ALA 33 33 33 ALA ALA A . n C 3 34 GLU 34 34 34 GLU GLU A . n C 3 35 CYS 35 35 35 CYS CYS A . n C 3 36 VAL 36 36 36 VAL VAL A . n C 3 37 TYR 37 37 37 TYR TYR A . n C 3 38 SER 38 38 38 SER SER A . n C 3 39 ASN 39 39 39 ASN ASN A . n C 3 40 GLU 40 40 40 GLU GLU A . n C 3 41 TRP 41 41 41 TRP TRP A . n C 3 42 ASP 42 42 42 ASP ASP A . n C 3 43 LYS 43 43 43 LYS LYS A . n C 3 44 TYR 44 44 44 TYR TYR A . n C 3 45 ALA 45 45 45 ALA ALA A . n C 3 46 GLN 46 46 46 GLN GLN A . n C 3 47 GLU 47 47 47 GLU GLU A . n C 3 48 VAL 48 48 48 VAL VAL A . n C 3 49 TYR 49 49 49 TYR TYR A . n C 3 50 GLU 50 50 50 GLU GLU A . n C 3 51 MET 51 51 51 MET MET A . n C 3 52 ASN 52 52 52 ASN ASN A . n C 3 53 PHE 53 53 53 PHE PHE A . n C 3 54 GLY 54 54 54 GLY GLY A . n C 3 55 GLU 55 55 55 GLU GLU A . n C 3 56 LYS 56 56 56 LYS LYS A . n C 3 57 PRO 57 57 57 PRO PRO A . n C 3 58 GLU 58 58 58 GLU GLU A . n C 3 59 GLY 59 59 59 GLY GLY A . n C 3 60 ASP 60 60 60 ASP ASP A . n C 3 61 ILE 61 61 61 ILE ILE A . n C 3 62 THR 62 62 62 THR THR A . n C 3 63 GLN 63 63 63 GLN GLN A . n C 3 64 VAL 64 64 64 VAL VAL A . n C 3 65 ASN 65 65 65 ASN ASN A . n C 3 66 GLU 66 66 66 GLU GLU A . n C 3 67 LYS 67 67 67 LYS LYS A . n C 3 68 THR 68 68 68 THR THR A . n C 3 69 ILE 69 69 69 ILE ILE A . n C 3 70 PRO 70 70 70 PRO PRO A . n C 3 71 ASP 71 71 71 ASP ASP A . n C 3 72 HIS 72 72 72 HIS HIS A . n C 3 73 ASP 73 73 73 ASP ASP A . n C 3 74 ILE 74 74 74 ILE ILE A . n C 3 75 LEU 75 75 75 LEU LEU A . n C 3 76 CYS 76 76 76 CYS CYS A . n C 3 77 ALA 77 77 77 ALA ALA A . n C 3 78 GLY 78 78 78 GLY GLY A . n C 3 79 PHE 79 79 79 PHE PHE A . n C 3 80 PRO 80 80 80 PRO PRO A . n C 3 81 CYS 81 81 81 CYS CYS A . n C 3 82 GLN 82 82 82 GLN GLN A . n C 3 83 ALA 83 83 83 ALA ALA A . n C 3 84 PHE 84 84 84 PHE PHE A . n C 3 85 SER 85 85 85 SER SER A . n C 3 86 ILE 86 86 86 ILE ILE A . n C 3 87 SER 87 87 87 SER SER A . n C 3 88 GLY 88 88 88 GLY GLY A . n C 3 89 LYS 89 89 89 LYS LYS A . n C 3 90 GLN 90 90 90 GLN GLN A . n C 3 91 LYS 91 91 91 LYS LYS A . n C 3 92 GLY 92 92 92 GLY GLY A . n C 3 93 PHE 93 93 93 PHE PHE A . n C 3 94 GLU 94 94 94 GLU GLU A . n C 3 95 ASP 95 95 95 ASP ASP A . n C 3 96 SER 96 96 96 SER SER A . n C 3 97 ARG 97 97 97 ARG ARG A . n C 3 98 GLY 98 98 98 GLY GLY A . n C 3 99 THR 99 99 99 THR THR A . n C 3 100 LEU 100 100 100 LEU LEU A . n C 3 101 PHE 101 101 101 PHE PHE A . n C 3 102 PHE 102 102 102 PHE PHE A . n C 3 103 ASP 103 103 103 ASP ASP A . n C 3 104 ILE 104 104 104 ILE ILE A . n C 3 105 ALA 105 105 105 ALA ALA A . n C 3 106 ARG 106 106 106 ARG ARG A . n C 3 107 ILE 107 107 107 ILE ILE A . n C 3 108 VAL 108 108 108 VAL VAL A . n C 3 109 ARG 109 109 109 ARG ARG A . n C 3 110 GLU 110 110 110 GLU GLU A . n C 3 111 LYS 111 111 111 LYS LYS A . n C 3 112 LYS 112 112 112 LYS LYS A . n C 3 113 PRO 113 113 113 PRO PRO A . n C 3 114 LYS 114 114 114 LYS LYS A . n C 3 115 VAL 115 115 115 VAL VAL A . n C 3 116 VAL 116 116 116 VAL VAL A . n C 3 117 PHE 117 117 117 PHE PHE A . n C 3 118 MET 118 118 118 MET MET A . n C 3 119 GLU 119 119 119 GLU GLU A . n C 3 120 ASN 120 120 120 ASN ASN A . n C 3 121 VAL 121 121 121 VAL VAL A . n C 3 122 LYS 122 122 122 LYS LYS A . n C 3 123 ASN 123 123 123 ASN ASN A . n C 3 124 PHE 124 124 124 PHE PHE A . n C 3 125 ALA 125 125 125 ALA ALA A . n C 3 126 SER 126 126 126 SER SER A . n C 3 127 HIS 127 127 127 HIS HIS A . n C 3 128 ASP 128 128 128 ASP ASP A . n C 3 129 ASN 129 129 129 ASN ASN A . n C 3 130 GLY 130 130 130 GLY GLY A . n C 3 131 ASN 131 131 131 ASN ASN A . n C 3 132 THR 132 132 132 THR THR A . n C 3 133 LEU 133 133 133 LEU LEU A . n C 3 134 GLU 134 134 134 GLU GLU A . n C 3 135 VAL 135 135 135 VAL VAL A . n C 3 136 VAL 136 136 136 VAL VAL A . n C 3 137 LYS 137 137 137 LYS LYS A . n C 3 138 ASN 138 138 138 ASN ASN A . n C 3 139 THR 139 139 139 THR THR A . n C 3 140 MET 140 140 140 MET MET A . n C 3 141 ASN 141 141 141 ASN ASN A . n C 3 142 GLU 142 142 142 GLU GLU A . n C 3 143 LEU 143 143 143 LEU LEU A . n C 3 144 ASP 144 144 144 ASP ASP A . n C 3 145 TYR 145 145 145 TYR TYR A . n C 3 146 SER 146 146 146 SER SER A . n C 3 147 PHE 147 147 147 PHE PHE A . n C 3 148 HIS 148 148 148 HIS HIS A . n C 3 149 ALA 149 149 149 ALA ALA A . n C 3 150 LYS 150 150 150 LYS LYS A . n C 3 151 VAL 151 151 151 VAL VAL A . n C 3 152 LEU 152 152 152 LEU LEU A . n C 3 153 ASN 153 153 153 ASN ASN A . n C 3 154 ALA 154 154 154 ALA ALA A . n C 3 155 LEU 155 155 155 LEU LEU A . n C 3 156 ASP 156 156 156 ASP ASP A . n C 3 157 TYR 157 157 157 TYR TYR A . n C 3 158 GLY 158 158 158 GLY GLY A . n C 3 159 ILE 159 159 159 ILE ILE A . n C 3 160 PRO 160 160 160 PRO PRO A . n C 3 161 GLN 161 161 161 GLN GLN A . n C 3 162 LYS 162 162 162 LYS LYS A . n C 3 163 ARG 163 163 163 ARG ARG A . n C 3 164 GLU 164 164 164 GLU GLU A . n C 3 165 ARG 165 165 165 ARG ARG A . n C 3 166 ILE 166 166 166 ILE ILE A . n C 3 167 TYR 167 167 167 TYR TYR A . n C 3 168 MET 168 168 168 MET MET A . n C 3 169 ILE 169 169 169 ILE ILE A . n C 3 170 CYS 170 170 170 CYS CYS A . n C 3 171 PHE 171 171 171 PHE PHE A . n C 3 172 ARG 172 172 172 ARG ARG A . n C 3 173 ASN 173 173 173 ASN ASN A . n C 3 174 ASP 174 174 174 ASP ASP A . n C 3 175 LEU 175 175 175 LEU LEU A . n C 3 176 ASN 176 176 176 ASN ASN A . n C 3 177 ILE 177 177 177 ILE ILE A . n C 3 178 GLN 178 178 178 GLN GLN A . n C 3 179 ASN 179 179 179 ASN ASN A . n C 3 180 PHE 180 180 180 PHE PHE A . n C 3 181 GLN 181 181 181 GLN GLN A . n C 3 182 PHE 182 182 182 PHE PHE A . n C 3 183 PRO 183 183 183 PRO PRO A . n C 3 184 LYS 184 184 184 LYS LYS A . n C 3 185 PRO 185 185 185 PRO PRO A . n C 3 186 PHE 186 186 186 PHE PHE A . n C 3 187 GLU 187 187 187 GLU GLU A . n C 3 188 LEU 188 188 188 LEU LEU A . n C 3 189 ASN 189 189 189 ASN ASN A . n C 3 190 THR 190 190 190 THR THR A . n C 3 191 PHE 191 191 191 PHE PHE A . n C 3 192 VAL 192 192 192 VAL VAL A . n C 3 193 LYS 193 193 193 LYS LYS A . n C 3 194 ASP 194 194 194 ASP ASP A . n C 3 195 LEU 195 195 195 LEU LEU A . n C 3 196 LEU 196 196 196 LEU LEU A . n C 3 197 LEU 197 197 197 LEU LEU A . n C 3 198 PRO 198 198 198 PRO PRO A . n C 3 199 ASP 199 199 199 ASP ASP A . n C 3 200 SER 200 200 200 SER SER A . n C 3 201 GLU 201 201 201 GLU GLU A . n C 3 202 VAL 202 202 202 VAL VAL A . n C 3 203 GLU 203 203 203 GLU GLU A . n C 3 204 HIS 204 204 204 HIS HIS A . n C 3 205 LEU 205 205 205 LEU LEU A . n C 3 206 VAL 206 206 206 VAL VAL A . n C 3 207 ILE 207 207 207 ILE ILE A . n C 3 208 ASP 208 208 208 ASP ASP A . n C 3 209 ARG 209 209 209 ARG ARG A . n C 3 210 LYS 210 210 210 LYS LYS A . n C 3 211 ASP 211 211 211 ASP ASP A . n C 3 212 LEU 212 212 212 LEU LEU A . n C 3 213 VAL 213 213 213 VAL VAL A . n C 3 214 MET 214 214 214 MET MET A . n C 3 215 THR 215 215 215 THR THR A . n C 3 216 ASN 216 216 216 ASN ASN A . n C 3 217 GLN 217 217 217 GLN GLN A . n C 3 218 GLU 218 218 218 GLU GLU A . n C 3 219 ILE 219 219 219 ILE ILE A . n C 3 220 GLU 220 220 220 GLU GLU A . n C 3 221 GLN 221 221 221 GLN GLN A . n C 3 222 THR 222 222 222 THR THR A . n C 3 223 THR 223 223 223 THR THR A . n C 3 224 PRO 224 224 224 PRO PRO A . n C 3 225 LYS 225 225 225 LYS LYS A . n C 3 226 THR 226 226 226 THR THR A . n C 3 227 VAL 227 227 227 VAL VAL A . n C 3 228 ARG 228 228 228 ARG ARG A . n C 3 229 LEU 229 229 229 LEU LEU A . n C 3 230 GLY 230 230 230 GLY GLY A . n C 3 231 ILE 231 231 231 ILE ILE A . n C 3 232 VAL 232 232 232 VAL VAL A . n C 3 233 GLY 233 233 233 GLY GLY A . n C 3 234 LYS 234 234 234 LYS LYS A . n C 3 235 GLY 235 235 235 GLY GLY A . n C 3 236 GLY 236 236 236 GLY GLY A . n C 3 237 GLN 237 237 237 GLN GLN A . n C 3 238 GLY 238 238 238 GLY GLY A . n C 3 239 GLU 239 239 239 GLU GLU A . n C 3 240 ARG 240 240 240 ARG ARG A . n C 3 241 ILE 241 241 241 ILE ILE A . n C 3 242 TYR 242 242 242 TYR TYR A . n C 3 243 SER 243 243 243 SER SER A . n C 3 244 THR 244 244 244 THR THR A . n C 3 245 ARG 245 245 245 ARG ARG A . n C 3 246 GLY 246 246 246 GLY GLY A . n C 3 247 ILE 247 247 247 ILE ILE A . n C 3 248 ALA 248 248 248 ALA ALA A . n C 3 249 ILE 249 249 249 ILE ILE A . n C 3 250 THR 250 250 250 THR THR A . n C 3 251 LEU 251 251 251 LEU LEU A . n C 3 252 SER 252 252 252 SER SER A . n C 3 253 ALA 253 253 253 ALA ALA A . n C 3 254 TYR 254 254 254 TYR TYR A . n C 3 255 GLY 255 255 255 GLY GLY A . n C 3 256 GLY 256 256 256 GLY GLY A . n C 3 257 GLY 257 257 257 GLY GLY A . n C 3 258 ILE 258 258 258 ILE ILE A . n C 3 259 PHE 259 259 259 PHE PHE A . n C 3 260 ALA 260 260 260 ALA ALA A . n C 3 261 LYS 261 261 261 LYS LYS A . n C 3 262 THR 262 262 262 THR THR A . n C 3 263 GLY 263 263 263 GLY GLY A . n C 3 264 GLY 264 264 264 GLY GLY A . n C 3 265 TYR 265 265 265 TYR TYR A . n C 3 266 LEU 266 266 266 LEU LEU A . n C 3 267 VAL 267 267 267 VAL VAL A . n C 3 268 ASN 268 268 268 ASN ASN A . n C 3 269 GLY 269 269 269 GLY GLY A . n C 3 270 LYS 270 270 270 LYS LYS A . n C 3 271 THR 271 271 271 THR THR A . n C 3 272 ARG 272 272 272 ARG ARG A . n C 3 273 LYS 273 273 273 LYS LYS A . n C 3 274 LEU 274 274 274 LEU LEU A . n C 3 275 HIS 275 275 275 HIS HIS A . n C 3 276 PRO 276 276 276 PRO PRO A . n C 3 277 ARG 277 277 277 ARG ARG A . n C 3 278 GLU 278 278 278 GLU GLU A . n C 3 279 CYS 279 279 279 CYS CYS A . n C 3 280 ALA 280 280 280 ALA ALA A . n C 3 281 ARG 281 281 281 ARG ARG A . n C 3 282 VAL 282 282 282 VAL VAL A . n C 3 283 MET 283 283 283 MET MET A . n C 3 284 GLY 284 284 284 GLY GLY A . n C 3 285 TYR 285 285 285 TYR TYR A . n C 3 286 PRO 286 286 286 PRO PRO A . n C 3 287 ASP 287 287 287 ASP ASP A . n C 3 288 SER 288 288 288 SER SER A . n C 3 289 TYR 289 289 289 TYR TYR A . n C 3 290 LYS 290 290 290 LYS LYS A . n C 3 291 VAL 291 291 291 VAL VAL A . n C 3 292 HIS 292 292 292 HIS HIS A . n C 3 293 PRO 293 293 293 PRO PRO A . n C 3 294 SER 294 294 294 SER SER A . n C 3 295 THR 295 295 295 THR THR A . n C 3 296 SER 296 296 296 SER SER A . n C 3 297 GLN 297 297 297 GLN GLN A . n C 3 298 ALA 298 298 298 ALA ALA A . n C 3 299 TYR 299 299 299 TYR TYR A . n C 3 300 LYS 300 300 300 LYS LYS A . n C 3 301 GLN 301 301 301 GLN GLN A . n C 3 302 PHE 302 302 302 PHE PHE A . n C 3 303 GLY 303 303 303 GLY GLY A . n C 3 304 ASN 304 304 304 ASN ASN A . n C 3 305 SER 305 305 305 SER SER A . n C 3 306 VAL 306 306 306 VAL VAL A . n C 3 307 VAL 307 307 307 VAL VAL A . n C 3 308 ILE 308 308 308 ILE ILE A . n C 3 309 ASN 309 309 309 ASN ASN A . n C 3 310 VAL 310 310 310 VAL VAL A . n C 3 311 LEU 311 311 311 LEU LEU A . n C 3 312 GLN 312 312 312 GLN GLN A . n C 3 313 TYR 313 313 313 TYR TYR A . n C 3 314 ILE 314 314 314 ILE ILE A . n C 3 315 ALA 315 315 315 ALA ALA A . n C 3 316 TYR 316 316 316 TYR TYR A . n C 3 317 ASN 317 317 317 ASN ASN A . n C 3 318 ILE 318 318 318 ILE ILE A . n C 3 319 GLY 319 319 319 GLY GLY A . n C 3 320 SER 320 320 320 SER SER A . n C 3 321 SER 321 321 321 SER SER A . n C 3 322 LEU 322 322 322 LEU LEU A . n C 3 323 ASN 323 323 323 ASN ASN A . n C 3 324 PHE 324 324 324 PHE PHE A . n C 3 325 LYS 325 325 325 LYS LYS A . n C 3 326 PRO 326 326 326 PRO PRO A . n C 3 327 TYR 327 327 327 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SAH 1 328 328 SAH SAH A . E 5 HOH 1 414 371 HOH HOH B . E 5 HOH 2 415 403 HOH HOH B . E 5 HOH 3 416 426 HOH HOH B . E 5 HOH 4 417 448 HOH HOH B . E 5 HOH 5 418 471 HOH HOH B . E 5 HOH 6 419 481 HOH HOH B . F 5 HOH 1 354 354 HOH HOH C . F 5 HOH 2 383 383 HOH HOH C . F 5 HOH 3 402 402 HOH HOH C . F 5 HOH 4 414 414 HOH HOH C . F 5 HOH 5 446 446 HOH HOH C . F 5 HOH 6 450 450 HOH HOH C . F 5 HOH 7 452 452 HOH HOH C . F 5 HOH 8 460 460 HOH HOH C . F 5 HOH 9 486 486 HOH HOH C . G 5 HOH 1 329 329 HOH HOH A . G 5 HOH 2 330 330 HOH HOH A . G 5 HOH 3 331 331 HOH HOH A . G 5 HOH 4 332 332 HOH HOH A . G 5 HOH 5 335 335 HOH HOH A . G 5 HOH 6 336 336 HOH HOH A . G 5 HOH 7 337 337 HOH HOH A . G 5 HOH 8 338 338 HOH HOH A . G 5 HOH 9 339 339 HOH HOH A . G 5 HOH 10 340 340 HOH HOH A . G 5 HOH 11 341 341 HOH HOH A . G 5 HOH 12 342 342 HOH HOH A . G 5 HOH 13 343 343 HOH HOH A . G 5 HOH 14 344 344 HOH HOH A . G 5 HOH 15 345 345 HOH HOH A . G 5 HOH 16 346 346 HOH HOH A . G 5 HOH 17 347 347 HOH HOH A . G 5 HOH 18 348 348 HOH HOH A . G 5 HOH 19 350 350 HOH HOH A . G 5 HOH 20 352 352 HOH HOH A . G 5 HOH 21 353 353 HOH HOH A . G 5 HOH 22 355 355 HOH HOH A . G 5 HOH 23 356 356 HOH HOH A . G 5 HOH 24 357 357 HOH HOH A . G 5 HOH 25 358 358 HOH HOH A . G 5 HOH 26 360 360 HOH HOH A . G 5 HOH 27 361 361 HOH HOH A . G 5 HOH 28 362 362 HOH HOH A . G 5 HOH 29 363 363 HOH HOH A . G 5 HOH 30 364 364 HOH HOH A . G 5 HOH 31 365 365 HOH HOH A . G 5 HOH 32 366 366 HOH HOH A . G 5 HOH 33 367 367 HOH HOH A . G 5 HOH 34 369 369 HOH HOH A . G 5 HOH 35 370 370 HOH HOH A . G 5 HOH 36 372 372 HOH HOH A . G 5 HOH 37 373 373 HOH HOH A . G 5 HOH 38 375 375 HOH HOH A . G 5 HOH 39 376 376 HOH HOH A . G 5 HOH 40 377 377 HOH HOH A . G 5 HOH 41 378 378 HOH HOH A . G 5 HOH 42 379 379 HOH HOH A . G 5 HOH 43 380 380 HOH HOH A . G 5 HOH 44 381 381 HOH HOH A . G 5 HOH 45 382 382 HOH HOH A . G 5 HOH 46 384 384 HOH HOH A . G 5 HOH 47 385 385 HOH HOH A . G 5 HOH 48 386 386 HOH HOH A . G 5 HOH 49 388 388 HOH HOH A . G 5 HOH 50 389 389 HOH HOH A . G 5 HOH 51 390 390 HOH HOH A . G 5 HOH 52 393 393 HOH HOH A . G 5 HOH 53 394 394 HOH HOH A . G 5 HOH 54 395 395 HOH HOH A . G 5 HOH 55 397 397 HOH HOH A . G 5 HOH 56 398 398 HOH HOH A . G 5 HOH 57 400 400 HOH HOH A . G 5 HOH 58 406 406 HOH HOH A . G 5 HOH 59 407 407 HOH HOH A . G 5 HOH 60 408 408 HOH HOH A . G 5 HOH 61 410 410 HOH HOH A . G 5 HOH 62 411 411 HOH HOH A . G 5 HOH 63 412 412 HOH HOH A . G 5 HOH 64 413 413 HOH HOH A . G 5 HOH 65 415 415 HOH HOH A . G 5 HOH 66 416 416 HOH HOH A . G 5 HOH 67 417 417 HOH HOH A . G 5 HOH 68 418 418 HOH HOH A . G 5 HOH 69 419 419 HOH HOH A . G 5 HOH 70 420 420 HOH HOH A . G 5 HOH 71 421 421 HOH HOH A . G 5 HOH 72 422 422 HOH HOH A . G 5 HOH 73 423 423 HOH HOH A . G 5 HOH 74 424 424 HOH HOH A . G 5 HOH 75 425 425 HOH HOH A . G 5 HOH 76 428 428 HOH HOH A . G 5 HOH 77 429 429 HOH HOH A . G 5 HOH 78 430 430 HOH HOH A . G 5 HOH 79 431 431 HOH HOH A . G 5 HOH 80 432 432 HOH HOH A . G 5 HOH 81 434 434 HOH HOH A . G 5 HOH 82 435 435 HOH HOH A . G 5 HOH 83 437 437 HOH HOH A . G 5 HOH 84 440 440 HOH HOH A . G 5 HOH 85 441 441 HOH HOH A . G 5 HOH 86 442 442 HOH HOH A . G 5 HOH 87 443 443 HOH HOH A . G 5 HOH 88 444 444 HOH HOH A . G 5 HOH 89 445 445 HOH HOH A . G 5 HOH 90 447 447 HOH HOH A . G 5 HOH 91 449 449 HOH HOH A . G 5 HOH 92 451 451 HOH HOH A . G 5 HOH 93 453 453 HOH HOH A . G 5 HOH 94 454 454 HOH HOH A . G 5 HOH 95 455 455 HOH HOH A . G 5 HOH 96 456 456 HOH HOH A . G 5 HOH 97 461 461 HOH HOH A . G 5 HOH 98 463 463 HOH HOH A . G 5 HOH 99 464 464 HOH HOH A . G 5 HOH 100 465 465 HOH HOH A . G 5 HOH 101 466 466 HOH HOH A . G 5 HOH 102 468 468 HOH HOH A . G 5 HOH 103 469 469 HOH HOH A . G 5 HOH 104 470 470 HOH HOH A . G 5 HOH 105 472 472 HOH HOH A . G 5 HOH 106 473 473 HOH HOH A . G 5 HOH 107 474 474 HOH HOH A . G 5 HOH 108 475 475 HOH HOH A . G 5 HOH 109 476 476 HOH HOH A . G 5 HOH 110 479 479 HOH HOH A . G 5 HOH 111 480 480 HOH HOH A . G 5 HOH 112 482 482 HOH HOH A . G 5 HOH 113 483 483 HOH HOH A . G 5 HOH 114 487 487 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5CM 6 B 5CM 407 ? DC ? 2 B 5NC 6 C 5NC 427 ? DC "5-AZA-CYTIDINE-5'MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-02-09 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement 3.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HIS _pdbx_validate_close_contact.auth_seq_id_1 275 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 470 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P B DC 402 ? ? "O5'" B DC 402 ? ? 1.665 1.593 0.072 0.010 N 2 1 N3 B DC 402 ? ? C4 B DC 402 ? ? 1.393 1.335 0.058 0.007 N 3 1 C2 B DC 403 ? ? N3 B DC 403 ? ? 1.423 1.353 0.070 0.008 N 4 1 C5 B DA 404 ? ? N7 B DA 404 ? ? 1.339 1.388 -0.049 0.006 N 5 1 "C5'" B DT 405 ? ? "C4'" B DT 405 ? ? 1.575 1.512 0.063 0.007 N 6 1 C5 B DT 405 ? ? C6 B DT 405 ? ? 1.399 1.339 0.060 0.007 N 7 1 "C5'" B DG 406 ? ? "C4'" B DG 406 ? ? 1.595 1.512 0.083 0.007 N 8 1 "O3'" B DG 406 ? ? "C3'" B DG 406 ? ? 1.523 1.435 0.088 0.013 N 9 1 N9 B DG 406 ? ? C4 B DG 406 ? ? 1.472 1.375 0.097 0.008 N 10 1 "C5'" B DG 408 ? ? "C4'" B DG 408 ? ? 1.614 1.512 0.102 0.007 N 11 1 C5 B DG 408 ? ? N7 B DG 408 ? ? 1.427 1.388 0.039 0.006 N 12 1 "C5'" B DC 409 ? ? "C4'" B DC 409 ? ? 1.579 1.512 0.067 0.007 N 13 1 "C5'" B DT 410 ? ? "C4'" B DT 410 ? ? 1.563 1.512 0.051 0.007 N 14 1 "O3'" B DT 410 ? ? P B DG 411 ? ? 1.692 1.607 0.085 0.012 Y 15 1 N3 B DG 411 ? ? C4 B DG 411 ? ? 1.299 1.350 -0.051 0.007 N 16 1 N3 B DA 412 ? ? C4 B DA 412 ? ? 1.383 1.344 0.039 0.006 N 17 1 C5 B DA 412 ? ? N7 B DA 412 ? ? 1.444 1.388 0.056 0.006 N 18 1 C8 B DA 412 ? ? N9 B DA 412 ? ? 1.443 1.373 0.070 0.008 N 19 1 N9 B DA 412 ? ? C4 B DA 412 ? ? 1.435 1.374 0.061 0.006 N 20 1 "O3'" B DA 412 ? ? P B DC 413 ? ? 1.808 1.607 0.201 0.012 Y 21 1 P B DC 413 ? ? "O5'" B DC 413 ? ? 1.665 1.593 0.072 0.010 N 22 1 N1 B DC 413 ? ? C6 B DC 413 ? ? 1.404 1.367 0.037 0.006 N 23 1 P C DG 422 ? ? "O5'" C DG 422 ? ? 1.724 1.593 0.131 0.010 N 24 1 "C5'" C DG 422 ? ? "C4'" C DG 422 ? ? 1.598 1.512 0.086 0.007 N 25 1 "C2'" C DG 422 ? ? "C1'" C DG 422 ? ? 1.296 1.518 -0.222 0.010 N 26 1 "O4'" C DG 422 ? ? "C1'" C DG 422 ? ? 1.674 1.420 0.254 0.011 N 27 1 "O3'" C DT 423 ? ? "C3'" C DT 423 ? ? 1.378 1.419 -0.041 0.006 N 28 1 C6 C DT 423 ? ? N1 C DT 423 ? ? 1.328 1.378 -0.050 0.007 N 29 1 "O3'" C DC 424 ? ? P C DA 425 ? ? 1.533 1.607 -0.074 0.012 Y 30 1 P C DA 425 ? ? "O5'" C DA 425 ? ? 1.659 1.593 0.066 0.010 N 31 1 "O3'" C DA 425 ? ? P C DG 426 ? ? 1.526 1.607 -0.081 0.012 Y 32 1 "C5'" C DG 426 ? ? "C4'" C DG 426 ? ? 1.575 1.512 0.063 0.007 N 33 1 P C DG 428 ? ? "O5'" C DG 428 ? ? 1.501 1.593 -0.092 0.010 N 34 1 "C5'" C DG 428 ? ? "C4'" C DG 428 ? ? 1.594 1.512 0.082 0.007 N 35 1 P C DC 429 ? ? "O5'" C DC 429 ? ? 1.676 1.593 0.083 0.010 N 36 1 "C5'" C DC 429 ? ? "C4'" C DC 429 ? ? 1.647 1.512 0.135 0.007 N 37 1 "O3'" C DC 429 ? ? P C DA 430 ? ? 1.692 1.607 0.085 0.012 Y 38 1 "C5'" C DA 430 ? ? "C4'" C DA 430 ? ? 1.578 1.512 0.066 0.007 N 39 1 "O3'" C DA 430 ? ? P C DT 431 ? ? 1.679 1.607 0.072 0.012 Y 40 1 "C5'" C DT 431 ? ? "C4'" C DT 431 ? ? 1.586 1.512 0.074 0.007 N 41 1 "C1'" C DT 431 ? ? N1 C DT 431 ? ? 1.609 1.488 0.121 0.013 N 42 1 N1 C DT 431 ? ? C2 C DT 431 ? ? 1.427 1.376 0.051 0.008 N 43 1 C2 C DG 433 ? ? N3 C DG 433 ? ? 1.378 1.323 0.055 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 402 ? ? "C4'" B DC 402 ? ? "C3'" B DC 402 ? ? 95.07 104.50 -9.43 0.40 N 2 1 C6 B DC 402 ? ? N1 B DC 402 ? ? C2 B DC 402 ? ? 123.08 120.30 2.78 0.40 N 3 1 N1 B DC 402 ? ? C2 B DC 402 ? ? N3 B DC 402 ? ? 114.73 119.20 -4.47 0.70 N 4 1 N3 B DC 402 ? ? C4 B DC 402 ? ? N4 B DC 402 ? ? 122.32 118.00 4.32 0.70 N 5 1 C5 B DC 402 ? ? C4 B DC 402 ? ? N4 B DC 402 ? ? 114.74 120.20 -5.46 0.70 N 6 1 "O4'" B DC 403 ? ? "C4'" B DC 403 ? ? "C3'" B DC 403 ? ? 94.50 104.50 -10.00 0.40 N 7 1 "O4'" B DC 403 ? ? "C1'" B DC 403 ? ? "C2'" B DC 403 ? ? 94.16 105.90 -11.74 0.80 N 8 1 N3 B DC 403 ? ? C4 B DC 403 ? ? N4 B DC 403 ? ? 124.33 118.00 6.33 0.70 N 9 1 C5 B DC 403 ? ? C4 B DC 403 ? ? N4 B DC 403 ? ? 114.49 120.20 -5.71 0.70 N 10 1 "C3'" B DC 403 ? ? "O3'" B DC 403 ? ? P B DA 404 ? ? 130.47 119.70 10.77 1.20 Y 11 1 "O5'" B DA 404 ? ? P B DA 404 ? ? OP2 B DA 404 ? ? 96.41 105.70 -9.29 0.90 N 12 1 "O4'" B DA 404 ? ? "C4'" B DA 404 ? ? "C3'" B DA 404 ? ? 100.05 104.50 -4.45 0.40 N 13 1 "O4'" B DA 404 ? ? "C1'" B DA 404 ? ? "C2'" B DA 404 ? ? 93.32 105.90 -12.58 0.80 N 14 1 N9 B DA 404 ? ? "C1'" B DA 404 ? ? "C2'" B DA 404 ? ? 123.73 114.30 9.43 1.40 N 15 1 "O4'" B DA 404 ? ? "C1'" B DA 404 ? ? N9 B DA 404 ? ? 98.66 108.00 -9.34 0.70 N 16 1 N1 B DA 404 ? ? C2 B DA 404 ? ? N3 B DA 404 ? ? 132.40 129.30 3.10 0.50 N 17 1 C2 B DA 404 ? ? N3 B DA 404 ? ? C4 B DA 404 ? ? 105.17 110.60 -5.43 0.50 N 18 1 C4 B DA 404 ? ? C5 B DA 404 ? ? C6 B DA 404 ? ? 121.26 117.00 4.26 0.50 N 19 1 C5 B DA 404 ? ? C6 B DA 404 ? ? N1 B DA 404 ? ? 114.10 117.70 -3.60 0.50 N 20 1 N1 B DA 404 ? ? C6 B DA 404 ? ? N6 B DA 404 ? ? 122.24 118.60 3.64 0.60 N 21 1 "C3'" B DA 404 ? ? "O3'" B DA 404 ? ? P B DT 405 ? ? 132.79 119.70 13.09 1.20 Y 22 1 "O3'" B DA 404 ? ? P B DT 405 ? ? "O5'" B DT 405 ? ? 89.69 104.00 -14.31 1.90 Y 23 1 "O5'" B DT 405 ? ? P B DT 405 ? ? OP2 B DT 405 ? ? 118.35 110.70 7.65 1.20 N 24 1 "C4'" B DT 405 ? ? "C3'" B DT 405 ? ? "C2'" B DT 405 ? ? 97.98 102.20 -4.22 0.70 N 25 1 "O4'" B DT 405 ? ? "C1'" B DT 405 ? ? "C2'" B DT 405 ? ? 97.65 105.90 -8.25 0.80 N 26 1 N1 B DT 405 ? ? C2 B DT 405 ? ? N3 B DT 405 ? ? 119.06 114.60 4.46 0.60 N 27 1 N3 B DT 405 ? ? C4 B DT 405 ? ? C5 B DT 405 ? ? 111.57 115.20 -3.63 0.60 N 28 1 C4 B DT 405 ? ? C5 B DT 405 ? ? C6 B DT 405 ? ? 122.84 118.00 4.84 0.60 N 29 1 C4 B DT 405 ? ? C5 B DT 405 ? ? C7 B DT 405 ? ? 112.32 119.00 -6.68 0.60 N 30 1 "C3'" B DT 405 ? ? "O3'" B DT 405 ? ? P B DG 406 ? ? 130.02 119.70 10.32 1.20 Y 31 1 "O3'" B DT 405 ? ? P B DG 406 ? ? "O5'" B DG 406 ? ? 90.97 104.00 -13.03 1.90 Y 32 1 P B DG 406 ? ? "O5'" B DG 406 ? ? "C5'" B DG 406 ? ? 130.87 120.90 9.97 1.60 N 33 1 "C4'" B DG 406 ? ? "C3'" B DG 406 ? ? "C2'" B DG 406 ? ? 93.57 102.20 -8.63 0.70 N 34 1 "O4'" B DG 406 ? ? "C1'" B DG 406 ? ? "C2'" B DG 406 ? ? 89.74 105.90 -16.16 0.80 N 35 1 "O4'" B DG 406 ? ? "C1'" B DG 406 ? ? N9 B DG 406 ? ? 113.58 108.30 5.28 0.30 N 36 1 N3 B DG 406 ? ? C4 B DG 406 ? ? C5 B DG 406 ? ? 125.52 128.60 -3.08 0.50 N 37 1 N3 B DG 406 ? ? C4 B DG 406 ? ? N9 B DG 406 ? ? 130.15 126.00 4.15 0.60 N 38 1 C6 B DG 406 ? ? C5 B DG 406 ? ? N7 B DG 406 ? ? 126.38 130.40 -4.02 0.60 N 39 1 "O4'" B DG 408 ? ? "C1'" B DG 408 ? ? N9 B DG 408 ? ? 114.20 108.30 5.90 0.30 N 40 1 "C4'" B DC 409 ? ? "C3'" B DC 409 ? ? "C2'" B DC 409 ? ? 97.90 102.20 -4.30 0.70 N 41 1 "O4'" B DC 409 ? ? "C1'" B DC 409 ? ? "C2'" B DC 409 ? ? 90.56 105.90 -15.34 0.80 N 42 1 "O4'" B DC 409 ? ? "C1'" B DC 409 ? ? N1 B DC 409 ? ? 112.98 108.30 4.68 0.30 N 43 1 C2 B DC 409 ? ? N3 B DC 409 ? ? C4 B DC 409 ? ? 123.06 119.90 3.16 0.50 N 44 1 N3 B DC 409 ? ? C4 B DC 409 ? ? C5 B DC 409 ? ? 117.34 121.90 -4.56 0.40 N 45 1 "C3'" B DC 409 ? ? "O3'" B DC 409 ? ? P B DT 410 ? ? 127.83 119.70 8.13 1.20 Y 46 1 "C4'" B DT 410 ? ? "C3'" B DT 410 ? ? "C2'" B DT 410 ? ? 97.37 102.20 -4.83 0.70 N 47 1 "O4'" B DT 410 ? ? "C1'" B DT 410 ? ? "C2'" B DT 410 ? ? 98.20 105.90 -7.70 0.80 N 48 1 "O4'" B DT 410 ? ? "C1'" B DT 410 ? ? N1 B DT 410 ? ? 110.96 108.30 2.66 0.30 N 49 1 C6 B DT 410 ? ? N1 B DT 410 ? ? C2 B DT 410 ? ? 117.51 121.30 -3.79 0.50 N 50 1 C4 B DT 410 ? ? C5 B DT 410 ? ? C6 B DT 410 ? ? 123.16 118.00 5.16 0.60 N 51 1 N3 B DT 410 ? ? C2 B DT 410 ? ? O2 B DT 410 ? ? 115.98 122.30 -6.32 0.60 N 52 1 "C1'" B DG 411 ? ? "O4'" B DG 411 ? ? "C4'" B DG 411 ? ? 114.87 110.30 4.57 0.70 N 53 1 "O4'" B DG 411 ? ? "C1'" B DG 411 ? ? "C2'" B DG 411 ? ? 98.73 105.90 -7.17 0.80 N 54 1 "O4'" B DG 411 ? ? "C1'" B DG 411 ? ? N9 B DG 411 ? ? 110.46 108.30 2.16 0.30 N 55 1 "C3'" B DG 411 ? ? "O3'" B DG 411 ? ? P B DA 412 ? ? 137.66 119.70 17.96 1.20 Y 56 1 "O5'" B DA 412 ? ? "C5'" B DA 412 ? ? "C4'" B DA 412 ? ? 103.02 109.40 -6.38 0.80 N 57 1 "O4'" B DA 412 ? ? "C4'" B DA 412 ? ? "C3'" B DA 412 ? ? 112.59 106.00 6.59 0.60 N 58 1 "C4'" B DA 412 ? ? "C3'" B DA 412 ? ? "C2'" B DA 412 ? ? 97.83 102.20 -4.37 0.70 N 59 1 "O4'" B DA 412 ? ? "C1'" B DA 412 ? ? N9 B DA 412 ? ? 112.15 108.30 3.85 0.30 N 60 1 N1 B DA 412 ? ? C2 B DA 412 ? ? N3 B DA 412 ? ? 125.36 129.30 -3.94 0.50 N 61 1 C2 B DA 412 ? ? N3 B DA 412 ? ? C4 B DA 412 ? ? 114.01 110.60 3.41 0.50 N 62 1 C4 B DA 412 ? ? C5 B DA 412 ? ? C6 B DA 412 ? ? 113.89 117.00 -3.11 0.50 N 63 1 "O4'" B DC 413 ? ? "C4'" B DC 413 ? ? "C3'" B DC 413 ? ? 97.72 104.50 -6.78 0.40 N 64 1 "C1'" B DC 413 ? ? "O4'" B DC 413 ? ? "C4'" B DC 413 ? ? 116.15 110.30 5.85 0.70 N 65 1 "O4'" B DC 413 ? ? "C1'" B DC 413 ? ? N1 B DC 413 ? ? 115.57 108.30 7.27 0.30 N 66 1 N1 B DC 413 ? ? C2 B DC 413 ? ? O2 B DC 413 ? ? 123.12 118.90 4.22 0.60 N 67 1 "O4'" C DG 422 ? ? "C4'" C DG 422 ? ? "C3'" C DG 422 ? ? 101.30 104.50 -3.20 0.40 N 68 1 N9 C DG 422 ? ? "C1'" C DG 422 ? ? "C2'" C DG 422 ? ? 142.06 114.30 27.76 1.40 N 69 1 "O4'" C DG 422 ? ? "C1'" C DG 422 ? ? N9 C DG 422 ? ? 98.73 108.00 -9.27 0.70 N 70 1 C8 C DG 422 ? ? N9 C DG 422 ? ? C4 C DG 422 ? ? 103.70 106.40 -2.70 0.40 N 71 1 N9 C DG 422 ? ? C4 C DG 422 ? ? C5 C DG 422 ? ? 107.95 105.40 2.55 0.40 N 72 1 "O4'" C DT 423 ? ? "C1'" C DT 423 ? ? N1 C DT 423 ? ? 114.78 108.30 6.48 0.30 N 73 1 N1 C DT 423 ? ? C2 C DT 423 ? ? N3 C DT 423 ? ? 119.31 114.60 4.71 0.60 N 74 1 N3 C DT 423 ? ? C4 C DT 423 ? ? C5 C DT 423 ? ? 110.92 115.20 -4.28 0.60 N 75 1 C4 C DT 423 ? ? C5 C DT 423 ? ? C6 C DT 423 ? ? 123.63 118.00 5.63 0.60 N 76 1 N3 C DT 423 ? ? C2 C DT 423 ? ? O2 C DT 423 ? ? 116.34 122.30 -5.96 0.60 N 77 1 C6 C DT 423 ? ? C5 C DT 423 ? ? C7 C DT 423 ? ? 117.63 122.90 -5.27 0.60 N 78 1 "O4'" C DC 424 ? ? "C1'" C DC 424 ? ? "C2'" C DC 424 ? ? 98.76 105.90 -7.14 0.80 N 79 1 "C3'" C DC 424 ? ? "O3'" C DC 424 ? ? P C DA 425 ? ? 133.87 119.70 14.17 1.20 Y 80 1 "O4'" C DA 425 ? ? "C1'" C DA 425 ? ? "C2'" C DA 425 ? ? 99.53 105.90 -6.37 0.80 N 81 1 P C DG 426 ? ? "O5'" C DG 426 ? ? "C5'" C DG 426 ? ? 132.44 120.90 11.54 1.60 N 82 1 C8 C DG 426 ? ? N9 C DG 426 ? ? C4 C DG 426 ? ? 103.75 106.40 -2.65 0.40 N 83 1 N9 C DG 426 ? ? C4 C DG 426 ? ? C5 C DG 426 ? ? 107.94 105.40 2.54 0.40 N 84 1 "O4'" C DG 428 ? ? "C1'" C DG 428 ? ? "C2'" C DG 428 ? ? 99.94 105.90 -5.96 0.80 N 85 1 "O4'" C DG 428 ? ? "C1'" C DG 428 ? ? N9 C DG 428 ? ? 111.36 108.30 3.06 0.30 N 86 1 C8 C DG 428 ? ? N9 C DG 428 ? ? C4 C DG 428 ? ? 103.28 106.40 -3.12 0.40 N 87 1 "O3'" C DG 428 ? ? P C DC 429 ? ? "O5'" C DC 429 ? ? 82.58 104.00 -21.42 1.90 Y 88 1 "O4'" C DC 429 ? ? "C1'" C DC 429 ? ? N1 C DC 429 ? ? 114.43 108.30 6.13 0.30 N 89 1 N3 C DC 429 ? ? C4 C DC 429 ? ? C5 C DC 429 ? ? 119.42 121.90 -2.48 0.40 N 90 1 N1 C DC 429 ? ? C2 C DC 429 ? ? O2 C DC 429 ? ? 123.32 118.90 4.42 0.60 N 91 1 N3 C DC 429 ? ? C2 C DC 429 ? ? O2 C DC 429 ? ? 116.91 121.90 -4.99 0.70 N 92 1 "C3'" C DC 429 ? ? "O3'" C DC 429 ? ? P C DA 430 ? ? 127.44 119.70 7.74 1.20 Y 93 1 "O3'" C DC 429 ? ? P C DA 430 ? ? "O5'" C DA 430 ? ? 87.88 104.00 -16.12 1.90 Y 94 1 "O4'" C DA 430 ? ? "C1'" C DA 430 ? ? N9 C DA 430 ? ? 115.35 108.30 7.05 0.30 N 95 1 "O4'" C DT 431 ? ? "C1'" C DT 431 ? ? "C2'" C DT 431 ? ? 96.27 105.90 -9.63 0.80 N 96 1 "O4'" C DT 431 ? ? "C1'" C DT 431 ? ? N1 C DT 431 ? ? 119.05 108.30 10.75 0.30 N 97 1 "O4'" C DG 432 ? ? "C4'" C DG 432 ? ? "C3'" C DG 432 ? ? 95.57 104.50 -8.93 0.40 N 98 1 "C4'" C DG 432 ? ? "C3'" C DG 432 ? ? "C2'" C DG 432 ? ? 96.47 102.20 -5.73 0.70 N 99 1 C2 C DG 432 ? ? N3 C DG 432 ? ? C4 C DG 432 ? ? 115.45 111.90 3.55 0.50 N 100 1 N1 C DG 432 ? ? C2 C DG 432 ? ? N2 C DG 432 ? ? 122.32 116.20 6.12 0.90 N 101 1 N3 C DG 432 ? ? C2 C DG 432 ? ? N2 C DG 432 ? ? 115.18 119.90 -4.72 0.70 N 102 1 "O4'" C DG 433 ? ? "C4'" C DG 433 ? ? "C3'" C DG 433 ? ? 101.76 104.50 -2.74 0.40 N 103 1 "O4'" C DG 433 ? ? "C1'" C DG 433 ? ? "C2'" C DG 433 ? ? 91.54 105.90 -14.36 0.80 N 104 1 C2 C DG 433 ? ? N3 C DG 433 ? ? C4 C DG 433 ? ? 115.19 111.90 3.29 0.50 N 105 1 N3 C DG 433 ? ? C4 C DG 433 ? ? C5 C DG 433 ? ? 124.82 128.60 -3.78 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 37 ? ? 178.54 132.92 2 1 GLU A 40 ? ? -171.80 134.94 3 1 GLU A 58 ? ? -68.30 -179.51 4 1 ASP A 60 ? ? 11.56 108.87 5 1 PHE A 84 ? ? -144.20 -25.54 6 1 HIS A 127 ? ? -39.43 138.47 7 1 ASP A 144 ? ? 78.89 49.17 8 1 ASN A 176 ? ? 56.42 18.89 9 1 PHE A 259 ? ? -107.62 43.42 10 1 ALA A 260 ? ? -38.60 135.98 11 1 LYS A 261 ? ? 68.29 -36.54 12 1 ASN A 268 ? ? 39.01 42.93 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC B 409 ? ? 0.063 'SIDE CHAIN' 2 1 DG C 428 ? ? 0.050 'SIDE CHAIN' 3 1 DG C 432 ? ? 0.065 'SIDE CHAIN' 4 1 DG C 433 ? ? 0.052 'SIDE CHAIN' 5 1 TYR A 265 ? ? 0.076 'SIDE CHAIN' # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "O3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 B _pdbx_validate_polymer_linkage.auth_comp_id_1 DA _pdbx_validate_polymer_linkage.auth_seq_id_1 412 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 B _pdbx_validate_polymer_linkage.auth_comp_id_2 DC _pdbx_validate_polymer_linkage.auth_seq_id_2 413 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.81 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 5NC P P N N 38 5NC OP1 O N N 39 5NC OP2 O N N 40 5NC OP3 O N N 41 5NC "O5'" O N N 42 5NC "C5'" C N N 43 5NC "C4'" C N R 44 5NC "O4'" O N N 45 5NC "C3'" C N S 46 5NC "O3'" O N N 47 5NC "C2'" C N N 48 5NC "C1'" C N R 49 5NC N1 N N N 50 5NC C2 C N N 51 5NC O2 O N N 52 5NC N3 N N N 53 5NC C4 C N N 54 5NC N4 N N N 55 5NC N5 N N N 56 5NC C6 C N N 57 5NC HOP2 H N N 58 5NC HOP3 H N N 59 5NC "H5'" H N N 60 5NC "H5''" H N N 61 5NC "H4'" H N N 62 5NC "H3'" H N N 63 5NC "HO'3" H N N 64 5NC "H2'" H N N 65 5NC "H2''" H N N 66 5NC "H1'1" H N N 67 5NC HN41 H N N 68 5NC HN42 H N N 69 5NC H6 H N N 70 ALA N N N N 71 ALA CA C N S 72 ALA C C N N 73 ALA O O N N 74 ALA CB C N N 75 ALA OXT O N N 76 ALA H H N N 77 ALA H2 H N N 78 ALA HA H N N 79 ALA HB1 H N N 80 ALA HB2 H N N 81 ALA HB3 H N N 82 ALA HXT H N N 83 ARG N N N N 84 ARG CA C N S 85 ARG C C N N 86 ARG O O N N 87 ARG CB C N N 88 ARG CG C N N 89 ARG CD C N N 90 ARG NE N N N 91 ARG CZ C N N 92 ARG NH1 N N N 93 ARG NH2 N N N 94 ARG OXT O N N 95 ARG H H N N 96 ARG H2 H N N 97 ARG HA H N N 98 ARG HB2 H N N 99 ARG HB3 H N N 100 ARG HG2 H N N 101 ARG HG3 H N N 102 ARG HD2 H N N 103 ARG HD3 H N N 104 ARG HE H N N 105 ARG HH11 H N N 106 ARG HH12 H N N 107 ARG HH21 H N N 108 ARG HH22 H N N 109 ARG HXT H N N 110 ASN N N N N 111 ASN CA C N S 112 ASN C C N N 113 ASN O O N N 114 ASN CB C N N 115 ASN CG C N N 116 ASN OD1 O N N 117 ASN ND2 N N N 118 ASN OXT O N N 119 ASN H H N N 120 ASN H2 H N N 121 ASN HA H N N 122 ASN HB2 H N N 123 ASN HB3 H N N 124 ASN HD21 H N N 125 ASN HD22 H N N 126 ASN HXT H N N 127 ASP N N N N 128 ASP CA C N S 129 ASP C C N N 130 ASP O O N N 131 ASP CB C N N 132 ASP CG C N N 133 ASP OD1 O N N 134 ASP OD2 O N N 135 ASP OXT O N N 136 ASP H H N N 137 ASP H2 H N N 138 ASP HA H N N 139 ASP HB2 H N N 140 ASP HB3 H N N 141 ASP HD2 H N N 142 ASP HXT H N N 143 CYS N N N N 144 CYS CA C N R 145 CYS C C N N 146 CYS O O N N 147 CYS CB C N N 148 CYS SG S N N 149 CYS OXT O N N 150 CYS H H N N 151 CYS H2 H N N 152 CYS HA H N N 153 CYS HB2 H N N 154 CYS HB3 H N N 155 CYS HG H N N 156 CYS HXT H N N 157 DA OP3 O N N 158 DA P P N N 159 DA OP1 O N N 160 DA OP2 O N N 161 DA "O5'" O N N 162 DA "C5'" C N N 163 DA "C4'" C N R 164 DA "O4'" O N N 165 DA "C3'" C N S 166 DA "O3'" O N N 167 DA "C2'" C N N 168 DA "C1'" C N R 169 DA N9 N Y N 170 DA C8 C Y N 171 DA N7 N Y N 172 DA C5 C Y N 173 DA C6 C Y N 174 DA N6 N N N 175 DA N1 N Y N 176 DA C2 C Y N 177 DA N3 N Y N 178 DA C4 C Y N 179 DA HOP3 H N N 180 DA HOP2 H N N 181 DA "H5'" H N N 182 DA "H5''" H N N 183 DA "H4'" H N N 184 DA "H3'" H N N 185 DA "HO3'" H N N 186 DA "H2'" H N N 187 DA "H2''" H N N 188 DA "H1'" H N N 189 DA H8 H N N 190 DA H61 H N N 191 DA H62 H N N 192 DA H2 H N N 193 DC OP3 O N N 194 DC P P N N 195 DC OP1 O N N 196 DC OP2 O N N 197 DC "O5'" O N N 198 DC "C5'" C N N 199 DC "C4'" C N R 200 DC "O4'" O N N 201 DC "C3'" C N S 202 DC "O3'" O N N 203 DC "C2'" C N N 204 DC "C1'" C N R 205 DC N1 N N N 206 DC C2 C N N 207 DC O2 O N N 208 DC N3 N N N 209 DC C4 C N N 210 DC N4 N N N 211 DC C5 C N N 212 DC C6 C N N 213 DC HOP3 H N N 214 DC HOP2 H N N 215 DC "H5'" H N N 216 DC "H5''" H N N 217 DC "H4'" H N N 218 DC "H3'" H N N 219 DC "HO3'" H N N 220 DC "H2'" H N N 221 DC "H2''" H N N 222 DC "H1'" H N N 223 DC H41 H N N 224 DC H42 H N N 225 DC H5 H N N 226 DC H6 H N N 227 DG OP3 O N N 228 DG P P N N 229 DG OP1 O N N 230 DG OP2 O N N 231 DG "O5'" O N N 232 DG "C5'" C N N 233 DG "C4'" C N R 234 DG "O4'" O N N 235 DG "C3'" C N S 236 DG "O3'" O N N 237 DG "C2'" C N N 238 DG "C1'" C N R 239 DG N9 N Y N 240 DG C8 C Y N 241 DG N7 N Y N 242 DG C5 C Y N 243 DG C6 C N N 244 DG O6 O N N 245 DG N1 N N N 246 DG C2 C N N 247 DG N2 N N N 248 DG N3 N N N 249 DG C4 C Y N 250 DG HOP3 H N N 251 DG HOP2 H N N 252 DG "H5'" H N N 253 DG "H5''" H N N 254 DG "H4'" H N N 255 DG "H3'" H N N 256 DG "HO3'" H N N 257 DG "H2'" H N N 258 DG "H2''" H N N 259 DG "H1'" H N N 260 DG H8 H N N 261 DG H1 H N N 262 DG H21 H N N 263 DG H22 H N N 264 DT OP3 O N N 265 DT P P N N 266 DT OP1 O N N 267 DT OP2 O N N 268 DT "O5'" O N N 269 DT "C5'" C N N 270 DT "C4'" C N R 271 DT "O4'" O N N 272 DT "C3'" C N S 273 DT "O3'" O N N 274 DT "C2'" C N N 275 DT "C1'" C N R 276 DT N1 N N N 277 DT C2 C N N 278 DT O2 O N N 279 DT N3 N N N 280 DT C4 C N N 281 DT O4 O N N 282 DT C5 C N N 283 DT C7 C N N 284 DT C6 C N N 285 DT HOP3 H N N 286 DT HOP2 H N N 287 DT "H5'" H N N 288 DT "H5''" H N N 289 DT "H4'" H N N 290 DT "H3'" H N N 291 DT "HO3'" H N N 292 DT "H2'" H N N 293 DT "H2''" H N N 294 DT "H1'" H N N 295 DT H3 H N N 296 DT H71 H N N 297 DT H72 H N N 298 DT H73 H N N 299 DT H6 H N N 300 GLN N N N N 301 GLN CA C N S 302 GLN C C N N 303 GLN O O N N 304 GLN CB C N N 305 GLN CG C N N 306 GLN CD C N N 307 GLN OE1 O N N 308 GLN NE2 N N N 309 GLN OXT O N N 310 GLN H H N N 311 GLN H2 H N N 312 GLN HA H N N 313 GLN HB2 H N N 314 GLN HB3 H N N 315 GLN HG2 H N N 316 GLN HG3 H N N 317 GLN HE21 H N N 318 GLN HE22 H N N 319 GLN HXT H N N 320 GLU N N N N 321 GLU CA C N S 322 GLU C C N N 323 GLU O O N N 324 GLU CB C N N 325 GLU CG C N N 326 GLU CD C N N 327 GLU OE1 O N N 328 GLU OE2 O N N 329 GLU OXT O N N 330 GLU H H N N 331 GLU H2 H N N 332 GLU HA H N N 333 GLU HB2 H N N 334 GLU HB3 H N N 335 GLU HG2 H N N 336 GLU HG3 H N N 337 GLU HE2 H N N 338 GLU HXT H N N 339 GLY N N N N 340 GLY CA C N N 341 GLY C C N N 342 GLY O O N N 343 GLY OXT O N N 344 GLY H H N N 345 GLY H2 H N N 346 GLY HA2 H N N 347 GLY HA3 H N N 348 GLY HXT H N N 349 HIS N N N N 350 HIS CA C N S 351 HIS C C N N 352 HIS O O N N 353 HIS CB C N N 354 HIS CG C Y N 355 HIS ND1 N Y N 356 HIS CD2 C Y N 357 HIS CE1 C Y N 358 HIS NE2 N Y N 359 HIS OXT O N N 360 HIS H H N N 361 HIS H2 H N N 362 HIS HA H N N 363 HIS HB2 H N N 364 HIS HB3 H N N 365 HIS HD1 H N N 366 HIS HD2 H N N 367 HIS HE1 H N N 368 HIS HE2 H N N 369 HIS HXT H N N 370 HOH O O N N 371 HOH H1 H N N 372 HOH H2 H N N 373 ILE N N N N 374 ILE CA C N S 375 ILE C C N N 376 ILE O O N N 377 ILE CB C N S 378 ILE CG1 C N N 379 ILE CG2 C N N 380 ILE CD1 C N N 381 ILE OXT O N N 382 ILE H H N N 383 ILE H2 H N N 384 ILE HA H N N 385 ILE HB H N N 386 ILE HG12 H N N 387 ILE HG13 H N N 388 ILE HG21 H N N 389 ILE HG22 H N N 390 ILE HG23 H N N 391 ILE HD11 H N N 392 ILE HD12 H N N 393 ILE HD13 H N N 394 ILE HXT H N N 395 LEU N N N N 396 LEU CA C N S 397 LEU C C N N 398 LEU O O N N 399 LEU CB C N N 400 LEU CG C N N 401 LEU CD1 C N N 402 LEU CD2 C N N 403 LEU OXT O N N 404 LEU H H N N 405 LEU H2 H N N 406 LEU HA H N N 407 LEU HB2 H N N 408 LEU HB3 H N N 409 LEU HG H N N 410 LEU HD11 H N N 411 LEU HD12 H N N 412 LEU HD13 H N N 413 LEU HD21 H N N 414 LEU HD22 H N N 415 LEU HD23 H N N 416 LEU HXT H N N 417 LYS N N N N 418 LYS CA C N S 419 LYS C C N N 420 LYS O O N N 421 LYS CB C N N 422 LYS CG C N N 423 LYS CD C N N 424 LYS CE C N N 425 LYS NZ N N N 426 LYS OXT O N N 427 LYS H H N N 428 LYS H2 H N N 429 LYS HA H N N 430 LYS HB2 H N N 431 LYS HB3 H N N 432 LYS HG2 H N N 433 LYS HG3 H N N 434 LYS HD2 H N N 435 LYS HD3 H N N 436 LYS HE2 H N N 437 LYS HE3 H N N 438 LYS HZ1 H N N 439 LYS HZ2 H N N 440 LYS HZ3 H N N 441 LYS HXT H N N 442 MET N N N N 443 MET CA C N S 444 MET C C N N 445 MET O O N N 446 MET CB C N N 447 MET CG C N N 448 MET SD S N N 449 MET CE C N N 450 MET OXT O N N 451 MET H H N N 452 MET H2 H N N 453 MET HA H N N 454 MET HB2 H N N 455 MET HB3 H N N 456 MET HG2 H N N 457 MET HG3 H N N 458 MET HE1 H N N 459 MET HE2 H N N 460 MET HE3 H N N 461 MET HXT H N N 462 PHE N N N N 463 PHE CA C N S 464 PHE C C N N 465 PHE O O N N 466 PHE CB C N N 467 PHE CG C Y N 468 PHE CD1 C Y N 469 PHE CD2 C Y N 470 PHE CE1 C Y N 471 PHE CE2 C Y N 472 PHE CZ C Y N 473 PHE OXT O N N 474 PHE H H N N 475 PHE H2 H N N 476 PHE HA H N N 477 PHE HB2 H N N 478 PHE HB3 H N N 479 PHE HD1 H N N 480 PHE HD2 H N N 481 PHE HE1 H N N 482 PHE HE2 H N N 483 PHE HZ H N N 484 PHE HXT H N N 485 PRO N N N N 486 PRO CA C N S 487 PRO C C N N 488 PRO O O N N 489 PRO CB C N N 490 PRO CG C N N 491 PRO CD C N N 492 PRO OXT O N N 493 PRO H H N N 494 PRO HA H N N 495 PRO HB2 H N N 496 PRO HB3 H N N 497 PRO HG2 H N N 498 PRO HG3 H N N 499 PRO HD2 H N N 500 PRO HD3 H N N 501 PRO HXT H N N 502 SAH N N N N 503 SAH CA C N S 504 SAH CB C N N 505 SAH CG C N N 506 SAH SD S N N 507 SAH C C N N 508 SAH O O N N 509 SAH OXT O N N 510 SAH "C5'" C N N 511 SAH "C4'" C N S 512 SAH "O4'" O N N 513 SAH "C3'" C N S 514 SAH "O3'" O N N 515 SAH "C2'" C N R 516 SAH "O2'" O N N 517 SAH "C1'" C N R 518 SAH N9 N Y N 519 SAH C8 C Y N 520 SAH N7 N Y N 521 SAH C5 C Y N 522 SAH C6 C Y N 523 SAH N6 N N N 524 SAH N1 N Y N 525 SAH C2 C Y N 526 SAH N3 N Y N 527 SAH C4 C Y N 528 SAH HN1 H N N 529 SAH HN2 H N N 530 SAH HA H N N 531 SAH HB1 H N N 532 SAH HB2 H N N 533 SAH HG1 H N N 534 SAH HG2 H N N 535 SAH HXT H N N 536 SAH "H5'1" H N N 537 SAH "H5'2" H N N 538 SAH "H4'" H N N 539 SAH "H3'" H N N 540 SAH "HO3'" H N N 541 SAH "H2'" H N N 542 SAH "HO2'" H N N 543 SAH "H1'" H N N 544 SAH H8 H N N 545 SAH HN61 H N N 546 SAH HN62 H N N 547 SAH H2 H N N 548 SER N N N N 549 SER CA C N S 550 SER C C N N 551 SER O O N N 552 SER CB C N N 553 SER OG O N N 554 SER OXT O N N 555 SER H H N N 556 SER H2 H N N 557 SER HA H N N 558 SER HB2 H N N 559 SER HB3 H N N 560 SER HG H N N 561 SER HXT H N N 562 THR N N N N 563 THR CA C N S 564 THR C C N N 565 THR O O N N 566 THR CB C N R 567 THR OG1 O N N 568 THR CG2 C N N 569 THR OXT O N N 570 THR H H N N 571 THR H2 H N N 572 THR HA H N N 573 THR HB H N N 574 THR HG1 H N N 575 THR HG21 H N N 576 THR HG22 H N N 577 THR HG23 H N N 578 THR HXT H N N 579 TRP N N N N 580 TRP CA C N S 581 TRP C C N N 582 TRP O O N N 583 TRP CB C N N 584 TRP CG C Y N 585 TRP CD1 C Y N 586 TRP CD2 C Y N 587 TRP NE1 N Y N 588 TRP CE2 C Y N 589 TRP CE3 C Y N 590 TRP CZ2 C Y N 591 TRP CZ3 C Y N 592 TRP CH2 C Y N 593 TRP OXT O N N 594 TRP H H N N 595 TRP H2 H N N 596 TRP HA H N N 597 TRP HB2 H N N 598 TRP HB3 H N N 599 TRP HD1 H N N 600 TRP HE1 H N N 601 TRP HE3 H N N 602 TRP HZ2 H N N 603 TRP HZ3 H N N 604 TRP HH2 H N N 605 TRP HXT H N N 606 TYR N N N N 607 TYR CA C N S 608 TYR C C N N 609 TYR O O N N 610 TYR CB C N N 611 TYR CG C Y N 612 TYR CD1 C Y N 613 TYR CD2 C Y N 614 TYR CE1 C Y N 615 TYR CE2 C Y N 616 TYR CZ C Y N 617 TYR OH O N N 618 TYR OXT O N N 619 TYR H H N N 620 TYR H2 H N N 621 TYR HA H N N 622 TYR HB2 H N N 623 TYR HB3 H N N 624 TYR HD1 H N N 625 TYR HD2 H N N 626 TYR HE1 H N N 627 TYR HE2 H N N 628 TYR HH H N N 629 TYR HXT H N N 630 VAL N N N N 631 VAL CA C N S 632 VAL C C N N 633 VAL O O N N 634 VAL CB C N N 635 VAL CG1 C N N 636 VAL CG2 C N N 637 VAL OXT O N N 638 VAL H H N N 639 VAL H2 H N N 640 VAL HA H N N 641 VAL HB H N N 642 VAL HG11 H N N 643 VAL HG12 H N N 644 VAL HG13 H N N 645 VAL HG21 H N N 646 VAL HG22 H N N 647 VAL HG23 H N N 648 VAL HXT H N N 649 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 5NC P OP1 doub N N 39 5NC P OP2 sing N N 40 5NC P OP3 sing N N 41 5NC P "O5'" sing N N 42 5NC OP2 HOP2 sing N N 43 5NC OP3 HOP3 sing N N 44 5NC "O5'" "C5'" sing N N 45 5NC "C5'" "C4'" sing N N 46 5NC "C5'" "H5'" sing N N 47 5NC "C5'" "H5''" sing N N 48 5NC "C4'" "O4'" sing N N 49 5NC "C4'" "C3'" sing N N 50 5NC "C4'" "H4'" sing N N 51 5NC "O4'" "C1'" sing N N 52 5NC "C3'" "O3'" sing N N 53 5NC "C3'" "C2'" sing N N 54 5NC "C3'" "H3'" sing N N 55 5NC "O3'" "HO'3" sing N N 56 5NC "C2'" "C1'" sing N N 57 5NC "C2'" "H2'" sing N N 58 5NC "C2'" "H2''" sing N N 59 5NC "C1'" N1 sing N N 60 5NC "C1'" "H1'1" sing N N 61 5NC N1 C2 sing N N 62 5NC N1 C6 sing N N 63 5NC C2 O2 doub N N 64 5NC C2 N3 sing N N 65 5NC N3 C4 doub N N 66 5NC C4 N4 sing N N 67 5NC C4 N5 sing N N 68 5NC N4 HN41 sing N N 69 5NC N4 HN42 sing N N 70 5NC N5 C6 doub N N 71 5NC C6 H6 sing N N 72 ALA N CA sing N N 73 ALA N H sing N N 74 ALA N H2 sing N N 75 ALA CA C sing N N 76 ALA CA CB sing N N 77 ALA CA HA sing N N 78 ALA C O doub N N 79 ALA C OXT sing N N 80 ALA CB HB1 sing N N 81 ALA CB HB2 sing N N 82 ALA CB HB3 sing N N 83 ALA OXT HXT sing N N 84 ARG N CA sing N N 85 ARG N H sing N N 86 ARG N H2 sing N N 87 ARG CA C sing N N 88 ARG CA CB sing N N 89 ARG CA HA sing N N 90 ARG C O doub N N 91 ARG C OXT sing N N 92 ARG CB CG sing N N 93 ARG CB HB2 sing N N 94 ARG CB HB3 sing N N 95 ARG CG CD sing N N 96 ARG CG HG2 sing N N 97 ARG CG HG3 sing N N 98 ARG CD NE sing N N 99 ARG CD HD2 sing N N 100 ARG CD HD3 sing N N 101 ARG NE CZ sing N N 102 ARG NE HE sing N N 103 ARG CZ NH1 sing N N 104 ARG CZ NH2 doub N N 105 ARG NH1 HH11 sing N N 106 ARG NH1 HH12 sing N N 107 ARG NH2 HH21 sing N N 108 ARG NH2 HH22 sing N N 109 ARG OXT HXT sing N N 110 ASN N CA sing N N 111 ASN N H sing N N 112 ASN N H2 sing N N 113 ASN CA C sing N N 114 ASN CA CB sing N N 115 ASN CA HA sing N N 116 ASN C O doub N N 117 ASN C OXT sing N N 118 ASN CB CG sing N N 119 ASN CB HB2 sing N N 120 ASN CB HB3 sing N N 121 ASN CG OD1 doub N N 122 ASN CG ND2 sing N N 123 ASN ND2 HD21 sing N N 124 ASN ND2 HD22 sing N N 125 ASN OXT HXT sing N N 126 ASP N CA sing N N 127 ASP N H sing N N 128 ASP N H2 sing N N 129 ASP CA C sing N N 130 ASP CA CB sing N N 131 ASP CA HA sing N N 132 ASP C O doub N N 133 ASP C OXT sing N N 134 ASP CB CG sing N N 135 ASP CB HB2 sing N N 136 ASP CB HB3 sing N N 137 ASP CG OD1 doub N N 138 ASP CG OD2 sing N N 139 ASP OD2 HD2 sing N N 140 ASP OXT HXT sing N N 141 CYS N CA sing N N 142 CYS N H sing N N 143 CYS N H2 sing N N 144 CYS CA C sing N N 145 CYS CA CB sing N N 146 CYS CA HA sing N N 147 CYS C O doub N N 148 CYS C OXT sing N N 149 CYS CB SG sing N N 150 CYS CB HB2 sing N N 151 CYS CB HB3 sing N N 152 CYS SG HG sing N N 153 CYS OXT HXT sing N N 154 DA OP3 P sing N N 155 DA OP3 HOP3 sing N N 156 DA P OP1 doub N N 157 DA P OP2 sing N N 158 DA P "O5'" sing N N 159 DA OP2 HOP2 sing N N 160 DA "O5'" "C5'" sing N N 161 DA "C5'" "C4'" sing N N 162 DA "C5'" "H5'" sing N N 163 DA "C5'" "H5''" sing N N 164 DA "C4'" "O4'" sing N N 165 DA "C4'" "C3'" sing N N 166 DA "C4'" "H4'" sing N N 167 DA "O4'" "C1'" sing N N 168 DA "C3'" "O3'" sing N N 169 DA "C3'" "C2'" sing N N 170 DA "C3'" "H3'" sing N N 171 DA "O3'" "HO3'" sing N N 172 DA "C2'" "C1'" sing N N 173 DA "C2'" "H2'" sing N N 174 DA "C2'" "H2''" sing N N 175 DA "C1'" N9 sing N N 176 DA "C1'" "H1'" sing N N 177 DA N9 C8 sing Y N 178 DA N9 C4 sing Y N 179 DA C8 N7 doub Y N 180 DA C8 H8 sing N N 181 DA N7 C5 sing Y N 182 DA C5 C6 sing Y N 183 DA C5 C4 doub Y N 184 DA C6 N6 sing N N 185 DA C6 N1 doub Y N 186 DA N6 H61 sing N N 187 DA N6 H62 sing N N 188 DA N1 C2 sing Y N 189 DA C2 N3 doub Y N 190 DA C2 H2 sing N N 191 DA N3 C4 sing Y N 192 DC OP3 P sing N N 193 DC OP3 HOP3 sing N N 194 DC P OP1 doub N N 195 DC P OP2 sing N N 196 DC P "O5'" sing N N 197 DC OP2 HOP2 sing N N 198 DC "O5'" "C5'" sing N N 199 DC "C5'" "C4'" sing N N 200 DC "C5'" "H5'" sing N N 201 DC "C5'" "H5''" sing N N 202 DC "C4'" "O4'" sing N N 203 DC "C4'" "C3'" sing N N 204 DC "C4'" "H4'" sing N N 205 DC "O4'" "C1'" sing N N 206 DC "C3'" "O3'" sing N N 207 DC "C3'" "C2'" sing N N 208 DC "C3'" "H3'" sing N N 209 DC "O3'" "HO3'" sing N N 210 DC "C2'" "C1'" sing N N 211 DC "C2'" "H2'" sing N N 212 DC "C2'" "H2''" sing N N 213 DC "C1'" N1 sing N N 214 DC "C1'" "H1'" sing N N 215 DC N1 C2 sing N N 216 DC N1 C6 sing N N 217 DC C2 O2 doub N N 218 DC C2 N3 sing N N 219 DC N3 C4 doub N N 220 DC C4 N4 sing N N 221 DC C4 C5 sing N N 222 DC N4 H41 sing N N 223 DC N4 H42 sing N N 224 DC C5 C6 doub N N 225 DC C5 H5 sing N N 226 DC C6 H6 sing N N 227 DG OP3 P sing N N 228 DG OP3 HOP3 sing N N 229 DG P OP1 doub N N 230 DG P OP2 sing N N 231 DG P "O5'" sing N N 232 DG OP2 HOP2 sing N N 233 DG "O5'" "C5'" sing N N 234 DG "C5'" "C4'" sing N N 235 DG "C5'" "H5'" sing N N 236 DG "C5'" "H5''" sing N N 237 DG "C4'" "O4'" sing N N 238 DG "C4'" "C3'" sing N N 239 DG "C4'" "H4'" sing N N 240 DG "O4'" "C1'" sing N N 241 DG "C3'" "O3'" sing N N 242 DG "C3'" "C2'" sing N N 243 DG "C3'" "H3'" sing N N 244 DG "O3'" "HO3'" sing N N 245 DG "C2'" "C1'" sing N N 246 DG "C2'" "H2'" sing N N 247 DG "C2'" "H2''" sing N N 248 DG "C1'" N9 sing N N 249 DG "C1'" "H1'" sing N N 250 DG N9 C8 sing Y N 251 DG N9 C4 sing Y N 252 DG C8 N7 doub Y N 253 DG C8 H8 sing N N 254 DG N7 C5 sing Y N 255 DG C5 C6 sing N N 256 DG C5 C4 doub Y N 257 DG C6 O6 doub N N 258 DG C6 N1 sing N N 259 DG N1 C2 sing N N 260 DG N1 H1 sing N N 261 DG C2 N2 sing N N 262 DG C2 N3 doub N N 263 DG N2 H21 sing N N 264 DG N2 H22 sing N N 265 DG N3 C4 sing N N 266 DT OP3 P sing N N 267 DT OP3 HOP3 sing N N 268 DT P OP1 doub N N 269 DT P OP2 sing N N 270 DT P "O5'" sing N N 271 DT OP2 HOP2 sing N N 272 DT "O5'" "C5'" sing N N 273 DT "C5'" "C4'" sing N N 274 DT "C5'" "H5'" sing N N 275 DT "C5'" "H5''" sing N N 276 DT "C4'" "O4'" sing N N 277 DT "C4'" "C3'" sing N N 278 DT "C4'" "H4'" sing N N 279 DT "O4'" "C1'" sing N N 280 DT "C3'" "O3'" sing N N 281 DT "C3'" "C2'" sing N N 282 DT "C3'" "H3'" sing N N 283 DT "O3'" "HO3'" sing N N 284 DT "C2'" "C1'" sing N N 285 DT "C2'" "H2'" sing N N 286 DT "C2'" "H2''" sing N N 287 DT "C1'" N1 sing N N 288 DT "C1'" "H1'" sing N N 289 DT N1 C2 sing N N 290 DT N1 C6 sing N N 291 DT C2 O2 doub N N 292 DT C2 N3 sing N N 293 DT N3 C4 sing N N 294 DT N3 H3 sing N N 295 DT C4 O4 doub N N 296 DT C4 C5 sing N N 297 DT C5 C7 sing N N 298 DT C5 C6 doub N N 299 DT C7 H71 sing N N 300 DT C7 H72 sing N N 301 DT C7 H73 sing N N 302 DT C6 H6 sing N N 303 GLN N CA sing N N 304 GLN N H sing N N 305 GLN N H2 sing N N 306 GLN CA C sing N N 307 GLN CA CB sing N N 308 GLN CA HA sing N N 309 GLN C O doub N N 310 GLN C OXT sing N N 311 GLN CB CG sing N N 312 GLN CB HB2 sing N N 313 GLN CB HB3 sing N N 314 GLN CG CD sing N N 315 GLN CG HG2 sing N N 316 GLN CG HG3 sing N N 317 GLN CD OE1 doub N N 318 GLN CD NE2 sing N N 319 GLN NE2 HE21 sing N N 320 GLN NE2 HE22 sing N N 321 GLN OXT HXT sing N N 322 GLU N CA sing N N 323 GLU N H sing N N 324 GLU N H2 sing N N 325 GLU CA C sing N N 326 GLU CA CB sing N N 327 GLU CA HA sing N N 328 GLU C O doub N N 329 GLU C OXT sing N N 330 GLU CB CG sing N N 331 GLU CB HB2 sing N N 332 GLU CB HB3 sing N N 333 GLU CG CD sing N N 334 GLU CG HG2 sing N N 335 GLU CG HG3 sing N N 336 GLU CD OE1 doub N N 337 GLU CD OE2 sing N N 338 GLU OE2 HE2 sing N N 339 GLU OXT HXT sing N N 340 GLY N CA sing N N 341 GLY N H sing N N 342 GLY N H2 sing N N 343 GLY CA C sing N N 344 GLY CA HA2 sing N N 345 GLY CA HA3 sing N N 346 GLY C O doub N N 347 GLY C OXT sing N N 348 GLY OXT HXT sing N N 349 HIS N CA sing N N 350 HIS N H sing N N 351 HIS N H2 sing N N 352 HIS CA C sing N N 353 HIS CA CB sing N N 354 HIS CA HA sing N N 355 HIS C O doub N N 356 HIS C OXT sing N N 357 HIS CB CG sing N N 358 HIS CB HB2 sing N N 359 HIS CB HB3 sing N N 360 HIS CG ND1 sing Y N 361 HIS CG CD2 doub Y N 362 HIS ND1 CE1 doub Y N 363 HIS ND1 HD1 sing N N 364 HIS CD2 NE2 sing Y N 365 HIS CD2 HD2 sing N N 366 HIS CE1 NE2 sing Y N 367 HIS CE1 HE1 sing N N 368 HIS NE2 HE2 sing N N 369 HIS OXT HXT sing N N 370 HOH O H1 sing N N 371 HOH O H2 sing N N 372 ILE N CA sing N N 373 ILE N H sing N N 374 ILE N H2 sing N N 375 ILE CA C sing N N 376 ILE CA CB sing N N 377 ILE CA HA sing N N 378 ILE C O doub N N 379 ILE C OXT sing N N 380 ILE CB CG1 sing N N 381 ILE CB CG2 sing N N 382 ILE CB HB sing N N 383 ILE CG1 CD1 sing N N 384 ILE CG1 HG12 sing N N 385 ILE CG1 HG13 sing N N 386 ILE CG2 HG21 sing N N 387 ILE CG2 HG22 sing N N 388 ILE CG2 HG23 sing N N 389 ILE CD1 HD11 sing N N 390 ILE CD1 HD12 sing N N 391 ILE CD1 HD13 sing N N 392 ILE OXT HXT sing N N 393 LEU N CA sing N N 394 LEU N H sing N N 395 LEU N H2 sing N N 396 LEU CA C sing N N 397 LEU CA CB sing N N 398 LEU CA HA sing N N 399 LEU C O doub N N 400 LEU C OXT sing N N 401 LEU CB CG sing N N 402 LEU CB HB2 sing N N 403 LEU CB HB3 sing N N 404 LEU CG CD1 sing N N 405 LEU CG CD2 sing N N 406 LEU CG HG sing N N 407 LEU CD1 HD11 sing N N 408 LEU CD1 HD12 sing N N 409 LEU CD1 HD13 sing N N 410 LEU CD2 HD21 sing N N 411 LEU CD2 HD22 sing N N 412 LEU CD2 HD23 sing N N 413 LEU OXT HXT sing N N 414 LYS N CA sing N N 415 LYS N H sing N N 416 LYS N H2 sing N N 417 LYS CA C sing N N 418 LYS CA CB sing N N 419 LYS CA HA sing N N 420 LYS C O doub N N 421 LYS C OXT sing N N 422 LYS CB CG sing N N 423 LYS CB HB2 sing N N 424 LYS CB HB3 sing N N 425 LYS CG CD sing N N 426 LYS CG HG2 sing N N 427 LYS CG HG3 sing N N 428 LYS CD CE sing N N 429 LYS CD HD2 sing N N 430 LYS CD HD3 sing N N 431 LYS CE NZ sing N N 432 LYS CE HE2 sing N N 433 LYS CE HE3 sing N N 434 LYS NZ HZ1 sing N N 435 LYS NZ HZ2 sing N N 436 LYS NZ HZ3 sing N N 437 LYS OXT HXT sing N N 438 MET N CA sing N N 439 MET N H sing N N 440 MET N H2 sing N N 441 MET CA C sing N N 442 MET CA CB sing N N 443 MET CA HA sing N N 444 MET C O doub N N 445 MET C OXT sing N N 446 MET CB CG sing N N 447 MET CB HB2 sing N N 448 MET CB HB3 sing N N 449 MET CG SD sing N N 450 MET CG HG2 sing N N 451 MET CG HG3 sing N N 452 MET SD CE sing N N 453 MET CE HE1 sing N N 454 MET CE HE2 sing N N 455 MET CE HE3 sing N N 456 MET OXT HXT sing N N 457 PHE N CA sing N N 458 PHE N H sing N N 459 PHE N H2 sing N N 460 PHE CA C sing N N 461 PHE CA CB sing N N 462 PHE CA HA sing N N 463 PHE C O doub N N 464 PHE C OXT sing N N 465 PHE CB CG sing N N 466 PHE CB HB2 sing N N 467 PHE CB HB3 sing N N 468 PHE CG CD1 doub Y N 469 PHE CG CD2 sing Y N 470 PHE CD1 CE1 sing Y N 471 PHE CD1 HD1 sing N N 472 PHE CD2 CE2 doub Y N 473 PHE CD2 HD2 sing N N 474 PHE CE1 CZ doub Y N 475 PHE CE1 HE1 sing N N 476 PHE CE2 CZ sing Y N 477 PHE CE2 HE2 sing N N 478 PHE CZ HZ sing N N 479 PHE OXT HXT sing N N 480 PRO N CA sing N N 481 PRO N CD sing N N 482 PRO N H sing N N 483 PRO CA C sing N N 484 PRO CA CB sing N N 485 PRO CA HA sing N N 486 PRO C O doub N N 487 PRO C OXT sing N N 488 PRO CB CG sing N N 489 PRO CB HB2 sing N N 490 PRO CB HB3 sing N N 491 PRO CG CD sing N N 492 PRO CG HG2 sing N N 493 PRO CG HG3 sing N N 494 PRO CD HD2 sing N N 495 PRO CD HD3 sing N N 496 PRO OXT HXT sing N N 497 SAH N CA sing N N 498 SAH N HN1 sing N N 499 SAH N HN2 sing N N 500 SAH CA CB sing N N 501 SAH CA C sing N N 502 SAH CA HA sing N N 503 SAH CB CG sing N N 504 SAH CB HB1 sing N N 505 SAH CB HB2 sing N N 506 SAH CG SD sing N N 507 SAH CG HG1 sing N N 508 SAH CG HG2 sing N N 509 SAH SD "C5'" sing N N 510 SAH C O doub N N 511 SAH C OXT sing N N 512 SAH OXT HXT sing N N 513 SAH "C5'" "C4'" sing N N 514 SAH "C5'" "H5'1" sing N N 515 SAH "C5'" "H5'2" sing N N 516 SAH "C4'" "O4'" sing N N 517 SAH "C4'" "C3'" sing N N 518 SAH "C4'" "H4'" sing N N 519 SAH "O4'" "C1'" sing N N 520 SAH "C3'" "O3'" sing N N 521 SAH "C3'" "C2'" sing N N 522 SAH "C3'" "H3'" sing N N 523 SAH "O3'" "HO3'" sing N N 524 SAH "C2'" "O2'" sing N N 525 SAH "C2'" "C1'" sing N N 526 SAH "C2'" "H2'" sing N N 527 SAH "O2'" "HO2'" sing N N 528 SAH "C1'" N9 sing N N 529 SAH "C1'" "H1'" sing N N 530 SAH N9 C8 sing Y N 531 SAH N9 C4 sing Y N 532 SAH C8 N7 doub Y N 533 SAH C8 H8 sing N N 534 SAH N7 C5 sing Y N 535 SAH C5 C6 sing Y N 536 SAH C5 C4 doub Y N 537 SAH C6 N6 sing N N 538 SAH C6 N1 doub Y N 539 SAH N6 HN61 sing N N 540 SAH N6 HN62 sing N N 541 SAH N1 C2 sing Y N 542 SAH C2 N3 doub Y N 543 SAH C2 H2 sing N N 544 SAH N3 C4 sing Y N 545 SER N CA sing N N 546 SER N H sing N N 547 SER N H2 sing N N 548 SER CA C sing N N 549 SER CA CB sing N N 550 SER CA HA sing N N 551 SER C O doub N N 552 SER C OXT sing N N 553 SER CB OG sing N N 554 SER CB HB2 sing N N 555 SER CB HB3 sing N N 556 SER OG HG sing N N 557 SER OXT HXT sing N N 558 THR N CA sing N N 559 THR N H sing N N 560 THR N H2 sing N N 561 THR CA C sing N N 562 THR CA CB sing N N 563 THR CA HA sing N N 564 THR C O doub N N 565 THR C OXT sing N N 566 THR CB OG1 sing N N 567 THR CB CG2 sing N N 568 THR CB HB sing N N 569 THR OG1 HG1 sing N N 570 THR CG2 HG21 sing N N 571 THR CG2 HG22 sing N N 572 THR CG2 HG23 sing N N 573 THR OXT HXT sing N N 574 TRP N CA sing N N 575 TRP N H sing N N 576 TRP N H2 sing N N 577 TRP CA C sing N N 578 TRP CA CB sing N N 579 TRP CA HA sing N N 580 TRP C O doub N N 581 TRP C OXT sing N N 582 TRP CB CG sing N N 583 TRP CB HB2 sing N N 584 TRP CB HB3 sing N N 585 TRP CG CD1 doub Y N 586 TRP CG CD2 sing Y N 587 TRP CD1 NE1 sing Y N 588 TRP CD1 HD1 sing N N 589 TRP CD2 CE2 doub Y N 590 TRP CD2 CE3 sing Y N 591 TRP NE1 CE2 sing Y N 592 TRP NE1 HE1 sing N N 593 TRP CE2 CZ2 sing Y N 594 TRP CE3 CZ3 doub Y N 595 TRP CE3 HE3 sing N N 596 TRP CZ2 CH2 doub Y N 597 TRP CZ2 HZ2 sing N N 598 TRP CZ3 CH2 sing Y N 599 TRP CZ3 HZ3 sing N N 600 TRP CH2 HH2 sing N N 601 TRP OXT HXT sing N N 602 TYR N CA sing N N 603 TYR N H sing N N 604 TYR N H2 sing N N 605 TYR CA C sing N N 606 TYR CA CB sing N N 607 TYR CA HA sing N N 608 TYR C O doub N N 609 TYR C OXT sing N N 610 TYR CB CG sing N N 611 TYR CB HB2 sing N N 612 TYR CB HB3 sing N N 613 TYR CG CD1 doub Y N 614 TYR CG CD2 sing Y N 615 TYR CD1 CE1 sing Y N 616 TYR CD1 HD1 sing N N 617 TYR CD2 CE2 doub Y N 618 TYR CD2 HD2 sing N N 619 TYR CE1 CZ doub Y N 620 TYR CE1 HE1 sing N N 621 TYR CE2 CZ sing Y N 622 TYR CE2 HE2 sing N N 623 TYR CZ OH sing N N 624 TYR OH HH sing N N 625 TYR OXT HXT sing N N 626 VAL N CA sing N N 627 VAL N H sing N N 628 VAL N H2 sing N N 629 VAL CA C sing N N 630 VAL CA CB sing N N 631 VAL CA HA sing N N 632 VAL C O doub N N 633 VAL C OXT sing N N 634 VAL CB CG1 sing N N 635 VAL CB CG2 sing N N 636 VAL CB HB sing N N 637 VAL CG1 HG11 sing N N 638 VAL CG1 HG12 sing N N 639 VAL CG1 HG13 sing N N 640 VAL CG2 HG21 sing N N 641 VAL CG2 HG22 sing N N 642 VAL CG2 HG23 sing N N 643 VAL OXT HXT sing N N 644 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 10MH 'double helix' 10MH 'b-form double helix' 10MH 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 -0.021 -0.367 0.185 -12.031 -0.691 -5.002 1 B_DC402:DG433_C B 402 ? C 433 ? 19 1 1 A DC 2 1_555 B DG 11 1_555 0.379 -0.400 0.155 -1.120 -8.305 0.673 2 B_DC403:DG432_C B 403 ? C 432 ? 19 1 1 A DA 3 1_555 B DT 10 1_555 0.060 -0.253 0.131 -6.138 5.849 0.604 3 B_DA404:DT431_C B 404 ? C 431 ? 20 1 1 A DT 4 1_555 B DA 9 1_555 -0.154 0.109 -0.153 7.986 -4.182 -4.894 4 B_DT405:DA430_C B 405 ? C 430 ? 20 1 1 A DG 5 1_555 B DC 8 1_555 0.327 -0.365 -0.035 7.195 -4.277 -7.468 5 B_DG406:DC429_C B 406 ? C 429 ? 19 1 1 A 5CM 6 1_555 B DG 7 1_555 -0.481 -0.242 -0.471 7.538 -7.152 -3.941 6 B_5CM407:DG428_C B 407 ? C 428 ? 19 1 1 A DC 8 1_555 B DG 5 1_555 -0.384 0.027 -0.266 3.175 -5.454 -2.379 7 B_DC409:DG426_C B 409 ? C 426 ? 19 1 1 A DT 9 1_555 B DA 4 1_555 -0.156 -0.199 -0.010 1.144 -1.724 -1.648 8 B_DT410:DA425_C B 410 ? C 425 ? 20 1 1 A DG 10 1_555 B DC 3 1_555 -0.121 -0.352 -0.090 4.016 -1.283 -1.893 9 B_DG411:DC424_C B 411 ? C 424 ? 19 1 1 A DA 11 1_555 B DT 2 1_555 0.544 -0.015 0.231 9.576 -8.778 -10.943 10 B_DA412:DT423_C B 412 ? C 423 ? 20 1 1 A DC 12 1_555 B DG 1 1_555 0.584 -0.449 0.294 3.277 -13.078 -0.646 11 B_DC413:DG422_C B 413 ? C 422 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DC 2 1_555 B DG 11 1_555 -0.078 -0.663 3.332 3.357 3.873 36.098 -1.601 0.594 3.226 6.211 -5.384 36.448 1 BB_DC402DC403:DG432DG433_CC B 402 ? C 433 ? B 403 ? C 432 ? 1 A DC 2 1_555 B DG 11 1_555 A DA 3 1_555 B DT 10 1_555 -0.401 -0.257 3.521 -1.349 9.166 34.137 -1.872 0.447 3.356 15.268 2.247 35.336 2 BB_DC403DA404:DT431DG432_CC B 403 ? C 432 ? B 404 ? C 431 ? 1 A DA 3 1_555 B DT 10 1_555 A DT 4 1_555 B DA 9 1_555 -0.450 -0.294 3.105 0.291 -0.123 28.737 -0.565 0.968 3.101 -0.247 -0.585 28.738 3 BB_DA404DT405:DA430DT431_CC B 404 ? C 431 ? B 405 ? C 430 ? 1 A DT 4 1_555 B DA 9 1_555 A DG 5 1_555 B DC 8 1_555 -1.210 0.123 3.547 -6.148 -1.367 39.064 0.360 0.985 3.682 -2.028 9.122 39.549 4 BB_DT405DG406:DC429DA430_CC B 405 ? C 430 ? B 406 ? C 429 ? 1 A DG 5 1_555 B DC 8 1_555 A 5CM 6 1_555 B DG 7 1_555 1.109 -1.067 3.629 1.922 -7.665 30.672 -0.314 -1.621 3.838 -14.198 -3.560 31.650 5 BB_DG4065CM407:DG428DC429_CC B 406 ? C 429 ? B 407 ? C 428 ? 1 A DC 8 1_555 B DG 5 1_555 A DT 9 1_555 B DA 4 1_555 0.315 -0.097 3.624 -0.886 4.952 37.651 -0.847 -0.609 3.575 7.632 1.365 37.974 6 BB_DC409DT410:DA425DG426_CC B 409 ? C 426 ? B 410 ? C 425 ? 1 A DT 9 1_555 B DA 4 1_555 A DG 10 1_555 B DC 3 1_555 0.478 0.045 3.372 2.440 1.484 36.386 -0.141 -0.413 3.395 2.371 -3.900 36.494 7 BB_DT410DG411:DC424DA425_CC B 410 ? C 425 ? B 411 ? C 424 ? 1 A DG 10 1_555 B DC 3 1_555 A DA 11 1_555 B DT 2 1_555 -0.176 -0.157 3.475 -2.771 4.502 30.919 -1.190 -0.228 3.421 8.368 5.150 31.357 8 BB_DG411DA412:DT423DC424_CC B 411 ? C 424 ? B 412 ? C 423 ? 1 A DA 11 1_555 B DT 2 1_555 A DC 12 1_555 B DG 1 1_555 1.148 -1.688 3.567 -0.624 5.844 31.575 -4.146 -2.192 3.188 10.625 1.134 32.104 9 BB_DA412DC413:DG422DT423_CC B 412 ? C 423 ? B 413 ? C 422 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 S-ADENOSYL-L-HOMOCYSTEINE SAH 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5MHT _pdbx_initial_refinement_model.details 'PDB ENTRY 5MHT' #