data_10ND # _entry.id 10ND # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.417 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 10ND pdb_000010nd 10.2210/pdb10nd/pdb WWPDB D_1000304238 ? ? EMDB EMD-75301 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2026-10-21 ? 2 'EM metadata' 1 0 2026-10-21 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 10ND _pdbx_database_status.recvd_initial_deposition_date 2026-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of human IL-10RA in complex with VHH E07' _pdbx_database_related.db_id EMD-75301 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email alice0625@gmail.com _pdbx_contact_author.name_first Hui _pdbx_contact_author.name_last Xu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5045-3644 # _audit_author.name 'Xu, H.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-5045-3644 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM structure of human IL-10RA in complex with VHH E07' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-026-11176-1 _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Xu, H.' _citation_author.ordinal 1 _citation_author.identifier_ORCID 0000-0002-5045-3644 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Interleukin-10 receptor subunit alpha' 25842.850 1 ? ? ? ? 2 polymer man 'VHH antibody E07' 14677.274 1 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IL-10 receptor subunit alpha,IL-10R subunit alpha,IL-10RA,CDw210a,Interleukin-10 receptor subunit 1,IL-10R subunit 1,IL-10R1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVALLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVR AVDGSRHSNWTVTNTRFSVDEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTFT HKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTNGGGGSHHHHHHHH ; ;HGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVALLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVR AVDGSRHSNWTVTNTRFSVDEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTFT HKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTNGGGGSHHHHHHHH ; A ? 2 'polypeptide(L)' no no ;QVQLVESGGGLVQAGGSLRLSCAASGRTFSAYGMAWYRQAPGKEREWVAAIRWIGDSTYYADSVKGRFTISKDNAKNTVY LQMNSLKPEDTAVYYCAAKTSVTSYLSEKSYNYWGQGTQVTVSSLEHHHHHH ; ;QVQLVESGGGLVQAGGSLRLSCAASGRTFSAYGMAWYRQAPGKEREWVAAIRWIGDSTYYADSVKGRFTISKDNAKNTVY LQMNSLKPEDTAVYYCAAKTSVTSYLSEKSYNYWGQGTQVTVSSLEHHHHHH ; B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 GLY n 1 3 THR n 1 4 GLU n 1 5 LEU n 1 6 PRO n 1 7 SER n 1 8 PRO n 1 9 PRO n 1 10 SER n 1 11 VAL n 1 12 TRP n 1 13 PHE n 1 14 GLU n 1 15 ALA n 1 16 GLU n 1 17 PHE n 1 18 PHE n 1 19 HIS n 1 20 HIS n 1 21 ILE n 1 22 LEU n 1 23 HIS n 1 24 TRP n 1 25 THR n 1 26 PRO n 1 27 ILE n 1 28 PRO n 1 29 ASN n 1 30 GLN n 1 31 SER n 1 32 GLU n 1 33 SER n 1 34 THR n 1 35 CYS n 1 36 TYR n 1 37 GLU n 1 38 VAL n 1 39 ALA n 1 40 LEU n 1 41 LEU n 1 42 ARG n 1 43 TYR n 1 44 GLY n 1 45 ILE n 1 46 GLU n 1 47 SER n 1 48 TRP n 1 49 ASN n 1 50 SER n 1 51 ILE n 1 52 SER n 1 53 ASN n 1 54 CYS n 1 55 SER n 1 56 GLN n 1 57 THR n 1 58 LEU n 1 59 SER n 1 60 TYR n 1 61 ASP n 1 62 LEU n 1 63 THR n 1 64 ALA n 1 65 VAL n 1 66 THR n 1 67 LEU n 1 68 ASP n 1 69 LEU n 1 70 TYR n 1 71 HIS n 1 72 SER n 1 73 ASN n 1 74 GLY n 1 75 TYR n 1 76 ARG n 1 77 ALA n 1 78 ARG n 1 79 VAL n 1 80 ARG n 1 81 ALA n 1 82 VAL n 1 83 ASP n 1 84 GLY n 1 85 SER n 1 86 ARG n 1 87 HIS n 1 88 SER n 1 89 ASN n 1 90 TRP n 1 91 THR n 1 92 VAL n 1 93 THR n 1 94 ASN n 1 95 THR n 1 96 ARG n 1 97 PHE n 1 98 SER n 1 99 VAL n 1 100 ASP n 1 101 GLU n 1 102 VAL n 1 103 THR n 1 104 LEU n 1 105 THR n 1 106 VAL n 1 107 GLY n 1 108 SER n 1 109 VAL n 1 110 ASN n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 HIS n 1 115 ASN n 1 116 GLY n 1 117 PHE n 1 118 ILE n 1 119 LEU n 1 120 GLY n 1 121 LYS n 1 122 ILE n 1 123 GLN n 1 124 LEU n 1 125 PRO n 1 126 ARG n 1 127 PRO n 1 128 LYS n 1 129 MET n 1 130 ALA n 1 131 PRO n 1 132 ALA n 1 133 ASN n 1 134 ASP n 1 135 THR n 1 136 TYR n 1 137 GLU n 1 138 SER n 1 139 ILE n 1 140 PHE n 1 141 SER n 1 142 HIS n 1 143 PHE n 1 144 ARG n 1 145 GLU n 1 146 TYR n 1 147 GLU n 1 148 ILE n 1 149 ALA n 1 150 ILE n 1 151 ARG n 1 152 LYS n 1 153 VAL n 1 154 PRO n 1 155 GLY n 1 156 ASN n 1 157 PHE n 1 158 THR n 1 159 PHE n 1 160 THR n 1 161 HIS n 1 162 LYS n 1 163 LYS n 1 164 VAL n 1 165 LYS n 1 166 HIS n 1 167 GLU n 1 168 ASN n 1 169 PHE n 1 170 SER n 1 171 LEU n 1 172 LEU n 1 173 THR n 1 174 SER n 1 175 GLY n 1 176 GLU n 1 177 VAL n 1 178 GLY n 1 179 GLU n 1 180 PHE n 1 181 CYS n 1 182 VAL n 1 183 GLN n 1 184 VAL n 1 185 LYS n 1 186 PRO n 1 187 SER n 1 188 VAL n 1 189 ALA n 1 190 SER n 1 191 ARG n 1 192 SER n 1 193 ASN n 1 194 LYS n 1 195 GLY n 1 196 MET n 1 197 TRP n 1 198 SER n 1 199 LYS n 1 200 GLU n 1 201 GLU n 1 202 CYS n 1 203 ILE n 1 204 SER n 1 205 LEU n 1 206 THR n 1 207 ARG n 1 208 GLN n 1 209 TYR n 1 210 PHE n 1 211 THR n 1 212 VAL n 1 213 THR n 1 214 ASN n 1 215 GLY n 1 216 GLY n 1 217 GLY n 1 218 GLY n 1 219 SER n 1 220 HIS n 1 221 HIS n 1 222 HIS n 1 223 HIS n 1 224 HIS n 1 225 HIS n 1 226 HIS n 1 227 HIS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 ALA n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 ARG n 2 28 THR n 2 29 PHE n 2 30 SER n 2 31 ALA n 2 32 TYR n 2 33 GLY n 2 34 MET n 2 35 ALA n 2 36 TRP n 2 37 TYR n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLU n 2 45 ARG n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 ALA n 2 51 ILE n 2 52 ARG n 2 53 TRP n 2 54 ILE n 2 55 GLY n 2 56 ASP n 2 57 SER n 2 58 THR n 2 59 TYR n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 LYS n 2 73 ASP n 2 74 ASN n 2 75 ALA n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 VAL n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 LYS n 2 88 PRO n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 VAL n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ALA n 2 99 LYS n 2 100 THR n 2 101 SER n 2 102 VAL n 2 103 THR n 2 104 SER n 2 105 TYR n 2 106 LEU n 2 107 SER n 2 108 GLU n 2 109 LYS n 2 110 SER n 2 111 TYR n 2 112 ASN n 2 113 TYR n 2 114 TRP n 2 115 GLY n 2 116 GLN n 2 117 GLY n 2 118 THR n 2 119 GLN n 2 120 VAL n 2 121 THR n 2 122 VAL n 2 123 SER n 2 124 SER n 2 125 LEU n 2 126 GLU n 2 127 HIS n 2 128 HIS n 2 129 HIS n 2 130 HIS n 2 131 HIS n 2 132 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 227 human ? 'IL10RA, IL10R' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 132 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Cricetulus griseus' 10029 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 22 ? ? ? A . n A 1 2 GLY 2 23 ? ? ? A . n A 1 3 THR 3 24 ? ? ? A . n A 1 4 GLU 4 25 25 GLU GLU A . n A 1 5 LEU 5 26 26 LEU LEU A . n A 1 6 PRO 6 27 27 PRO PRO A . n A 1 7 SER 7 28 28 SER SER A . n A 1 8 PRO 8 29 29 PRO PRO A . n A 1 9 PRO 9 30 30 PRO PRO A . n A 1 10 SER 10 31 31 SER SER A . n A 1 11 VAL 11 32 32 VAL VAL A . n A 1 12 TRP 12 33 33 TRP TRP A . n A 1 13 PHE 13 34 34 PHE PHE A . n A 1 14 GLU 14 35 35 GLU GLU A . n A 1 15 ALA 15 36 36 ALA ALA A . n A 1 16 GLU 16 37 37 GLU GLU A . n A 1 17 PHE 17 38 38 PHE PHE A . n A 1 18 PHE 18 39 39 PHE PHE A . n A 1 19 HIS 19 40 40 HIS HIS A . n A 1 20 HIS 20 41 41 HIS HIS A . n A 1 21 ILE 21 42 42 ILE ILE A . n A 1 22 LEU 22 43 43 LEU LEU A . n A 1 23 HIS 23 44 44 HIS HIS A . n A 1 24 TRP 24 45 45 TRP TRP A . n A 1 25 THR 25 46 46 THR THR A . n A 1 26 PRO 26 47 47 PRO PRO A . n A 1 27 ILE 27 48 48 ILE ILE A . n A 1 28 PRO 28 49 49 PRO PRO A . n A 1 29 ASN 29 50 50 ASN ASN A . n A 1 30 GLN 30 51 51 GLN GLN A . n A 1 31 SER 31 52 52 SER SER A . n A 1 32 GLU 32 53 53 GLU GLU A . n A 1 33 SER 33 54 54 SER SER A . n A 1 34 THR 34 55 55 THR THR A . n A 1 35 CYS 35 56 56 CYS CYS A . n A 1 36 TYR 36 57 57 TYR TYR A . n A 1 37 GLU 37 58 58 GLU GLU A . n A 1 38 VAL 38 59 59 VAL VAL A . n A 1 39 ALA 39 60 60 ALA ALA A . n A 1 40 LEU 40 61 61 LEU LEU A . n A 1 41 LEU 41 62 62 LEU LEU A . n A 1 42 ARG 42 63 63 ARG ARG A . n A 1 43 TYR 43 64 64 TYR TYR A . n A 1 44 GLY 44 65 65 GLY GLY A . n A 1 45 ILE 45 66 66 ILE ILE A . n A 1 46 GLU 46 67 67 GLU GLU A . n A 1 47 SER 47 68 68 SER SER A . n A 1 48 TRP 48 69 69 TRP TRP A . n A 1 49 ASN 49 70 70 ASN ASN A . n A 1 50 SER 50 71 71 SER SER A . n A 1 51 ILE 51 72 72 ILE ILE A . n A 1 52 SER 52 73 73 SER SER A . n A 1 53 ASN 53 74 74 ASN ASN A . n A 1 54 CYS 54 75 75 CYS CYS A . n A 1 55 SER 55 76 76 SER SER A . n A 1 56 GLN 56 77 77 GLN GLN A . n A 1 57 THR 57 78 78 THR THR A . n A 1 58 LEU 58 79 79 LEU LEU A . n A 1 59 SER 59 80 80 SER SER A . n A 1 60 TYR 60 81 81 TYR TYR A . n A 1 61 ASP 61 82 82 ASP ASP A . n A 1 62 LEU 62 83 83 LEU LEU A . n A 1 63 THR 63 84 84 THR THR A . n A 1 64 ALA 64 85 85 ALA ALA A . n A 1 65 VAL 65 86 86 VAL VAL A . n A 1 66 THR 66 87 87 THR THR A . n A 1 67 LEU 67 88 88 LEU LEU A . n A 1 68 ASP 68 89 89 ASP ASP A . n A 1 69 LEU 69 90 90 LEU LEU A . n A 1 70 TYR 70 91 91 TYR TYR A . n A 1 71 HIS 71 92 92 HIS HIS A . n A 1 72 SER 72 93 93 SER SER A . n A 1 73 ASN 73 94 94 ASN ASN A . n A 1 74 GLY 74 95 95 GLY GLY A . n A 1 75 TYR 75 96 96 TYR TYR A . n A 1 76 ARG 76 97 97 ARG ARG A . n A 1 77 ALA 77 98 98 ALA ALA A . n A 1 78 ARG 78 99 99 ARG ARG A . n A 1 79 VAL 79 100 100 VAL VAL A . n A 1 80 ARG 80 101 101 ARG ARG A . n A 1 81 ALA 81 102 102 ALA ALA A . n A 1 82 VAL 82 103 103 VAL VAL A . n A 1 83 ASP 83 104 104 ASP ASP A . n A 1 84 GLY 84 105 105 GLY GLY A . n A 1 85 SER 85 106 106 SER SER A . n A 1 86 ARG 86 107 107 ARG ARG A . n A 1 87 HIS 87 108 108 HIS HIS A . n A 1 88 SER 88 109 109 SER SER A . n A 1 89 ASN 89 110 110 ASN ASN A . n A 1 90 TRP 90 111 111 TRP TRP A . n A 1 91 THR 91 112 112 THR THR A . n A 1 92 VAL 92 113 113 VAL VAL A . n A 1 93 THR 93 114 114 THR THR A . n A 1 94 ASN 94 115 115 ASN ASN A . n A 1 95 THR 95 116 116 THR THR A . n A 1 96 ARG 96 117 117 ARG ARG A . n A 1 97 PHE 97 118 118 PHE PHE A . n A 1 98 SER 98 119 119 SER SER A . n A 1 99 VAL 99 120 120 VAL VAL A . n A 1 100 ASP 100 121 121 ASP ASP A . n A 1 101 GLU 101 122 122 GLU GLU A . n A 1 102 VAL 102 123 123 VAL VAL A . n A 1 103 THR 103 124 124 THR THR A . n A 1 104 LEU 104 125 125 LEU LEU A . n A 1 105 THR 105 126 126 THR THR A . n A 1 106 VAL 106 127 127 VAL VAL A . n A 1 107 GLY 107 128 128 GLY GLY A . n A 1 108 SER 108 129 129 SER SER A . n A 1 109 VAL 109 130 130 VAL VAL A . n A 1 110 ASN 110 131 131 ASN ASN A . n A 1 111 LEU 111 132 132 LEU LEU A . n A 1 112 GLU 112 133 133 GLU GLU A . n A 1 113 ILE 113 134 134 ILE ILE A . n A 1 114 HIS 114 135 135 HIS HIS A . n A 1 115 ASN 115 136 136 ASN ASN A . n A 1 116 GLY 116 137 137 GLY GLY A . n A 1 117 PHE 117 138 138 PHE PHE A . n A 1 118 ILE 118 139 139 ILE ILE A . n A 1 119 LEU 119 140 140 LEU LEU A . n A 1 120 GLY 120 141 141 GLY GLY A . n A 1 121 LYS 121 142 142 LYS LYS A . n A 1 122 ILE 122 143 143 ILE ILE A . n A 1 123 GLN 123 144 144 GLN GLN A . n A 1 124 LEU 124 145 145 LEU LEU A . n A 1 125 PRO 125 146 146 PRO PRO A . n A 1 126 ARG 126 147 147 ARG ARG A . n A 1 127 PRO 127 148 148 PRO PRO A . n A 1 128 LYS 128 149 149 LYS LYS A . n A 1 129 MET 129 150 150 MET MET A . n A 1 130 ALA 130 151 151 ALA ALA A . n A 1 131 PRO 131 152 152 PRO PRO A . n A 1 132 ALA 132 153 153 ALA ALA A . n A 1 133 ASN 133 154 154 ASN ASN A . n A 1 134 ASP 134 155 155 ASP ASP A . n A 1 135 THR 135 156 156 THR THR A . n A 1 136 TYR 136 157 157 TYR TYR A . n A 1 137 GLU 137 158 158 GLU GLU A . n A 1 138 SER 138 159 159 SER SER A . n A 1 139 ILE 139 160 160 ILE ILE A . n A 1 140 PHE 140 161 161 PHE PHE A . n A 1 141 SER 141 162 162 SER SER A . n A 1 142 HIS 142 163 163 HIS HIS A . n A 1 143 PHE 143 164 164 PHE PHE A . n A 1 144 ARG 144 165 165 ARG ARG A . n A 1 145 GLU 145 166 166 GLU GLU A . n A 1 146 TYR 146 167 167 TYR TYR A . n A 1 147 GLU 147 168 168 GLU GLU A . n A 1 148 ILE 148 169 169 ILE ILE A . n A 1 149 ALA 149 170 170 ALA ALA A . n A 1 150 ILE 150 171 171 ILE ILE A . n A 1 151 ARG 151 172 172 ARG ARG A . n A 1 152 LYS 152 173 173 LYS LYS A . n A 1 153 VAL 153 174 174 VAL VAL A . n A 1 154 PRO 154 175 175 PRO PRO A . n A 1 155 GLY 155 176 176 GLY GLY A . n A 1 156 ASN 156 177 177 ASN ASN A . n A 1 157 PHE 157 178 178 PHE PHE A . n A 1 158 THR 158 179 179 THR THR A . n A 1 159 PHE 159 180 180 PHE PHE A . n A 1 160 THR 160 181 181 THR THR A . n A 1 161 HIS 161 182 182 HIS HIS A . n A 1 162 LYS 162 183 183 LYS LYS A . n A 1 163 LYS 163 184 184 LYS LYS A . n A 1 164 VAL 164 185 185 VAL VAL A . n A 1 165 LYS 165 186 186 LYS LYS A . n A 1 166 HIS 166 187 187 HIS HIS A . n A 1 167 GLU 167 188 188 GLU GLU A . n A 1 168 ASN 168 189 189 ASN ASN A . n A 1 169 PHE 169 190 190 PHE PHE A . n A 1 170 SER 170 191 191 SER SER A . n A 1 171 LEU 171 192 192 LEU LEU A . n A 1 172 LEU 172 193 193 LEU LEU A . n A 1 173 THR 173 194 194 THR THR A . n A 1 174 SER 174 195 195 SER SER A . n A 1 175 GLY 175 196 196 GLY GLY A . n A 1 176 GLU 176 197 197 GLU GLU A . n A 1 177 VAL 177 198 198 VAL VAL A . n A 1 178 GLY 178 199 199 GLY GLY A . n A 1 179 GLU 179 200 200 GLU GLU A . n A 1 180 PHE 180 201 201 PHE PHE A . n A 1 181 CYS 181 202 202 CYS CYS A . n A 1 182 VAL 182 203 203 VAL VAL A . n A 1 183 GLN 183 204 204 GLN GLN A . n A 1 184 VAL 184 205 205 VAL VAL A . n A 1 185 LYS 185 206 206 LYS LYS A . n A 1 186 PRO 186 207 207 PRO PRO A . n A 1 187 SER 187 208 208 SER SER A . n A 1 188 VAL 188 209 209 VAL VAL A . n A 1 189 ALA 189 210 210 ALA ALA A . n A 1 190 SER 190 211 211 SER SER A . n A 1 191 ARG 191 212 212 ARG ARG A . n A 1 192 SER 192 213 213 SER SER A . n A 1 193 ASN 193 214 214 ASN ASN A . n A 1 194 LYS 194 215 215 LYS LYS A . n A 1 195 GLY 195 216 216 GLY GLY A . n A 1 196 MET 196 217 217 MET MET A . n A 1 197 TRP 197 218 218 TRP TRP A . n A 1 198 SER 198 219 219 SER SER A . n A 1 199 LYS 199 220 220 LYS LYS A . n A 1 200 GLU 200 221 221 GLU GLU A . n A 1 201 GLU 201 222 222 GLU GLU A . n A 1 202 CYS 202 223 223 CYS CYS A . n A 1 203 ILE 203 224 224 ILE ILE A . n A 1 204 SER 204 225 225 SER SER A . n A 1 205 LEU 205 226 226 LEU LEU A . n A 1 206 THR 206 227 227 THR THR A . n A 1 207 ARG 207 228 ? ? ? A . n A 1 208 GLN 208 229 ? ? ? A . n A 1 209 TYR 209 230 ? ? ? A . n A 1 210 PHE 210 231 ? ? ? A . n A 1 211 THR 211 232 ? ? ? A . n A 1 212 VAL 212 233 ? ? ? A . n A 1 213 THR 213 234 ? ? ? A . n A 1 214 ASN 214 235 ? ? ? A . n A 1 215 GLY 215 236 ? ? ? A . n A 1 216 GLY 216 237 ? ? ? A . n A 1 217 GLY 217 238 ? ? ? A . n A 1 218 GLY 218 239 ? ? ? A . n A 1 219 SER 219 240 ? ? ? A . n A 1 220 HIS 220 241 ? ? ? A . n A 1 221 HIS 221 242 ? ? ? A . n A 1 222 HIS 222 243 ? ? ? A . n A 1 223 HIS 223 244 ? ? ? A . n A 1 224 HIS 224 245 ? ? ? A . n A 1 225 HIS 225 246 ? ? ? A . n A 1 226 HIS 226 247 ? ? ? A . n A 1 227 HIS 227 248 ? ? ? A . n B 2 1 GLN 1 1 1 GLN GLN B . n B 2 2 VAL 2 2 2 VAL VAL B . n B 2 3 GLN 3 3 3 GLN GLN B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 GLU 6 6 6 GLU GLU B . n B 2 7 SER 7 7 7 SER SER B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 GLY 9 9 9 GLY GLY B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LEU 11 11 11 LEU LEU B . n B 2 12 VAL 12 12 12 VAL VAL B . n B 2 13 GLN 13 13 13 GLN GLN B . n B 2 14 ALA 14 14 14 ALA ALA B . n B 2 15 GLY 15 15 15 GLY GLY B . n B 2 16 GLY 16 16 16 GLY GLY B . n B 2 17 SER 17 17 17 SER SER B . n B 2 18 LEU 18 18 18 LEU LEU B . n B 2 19 ARG 19 19 19 ARG ARG B . n B 2 20 LEU 20 20 20 LEU LEU B . n B 2 21 SER 21 21 21 SER SER B . n B 2 22 CYS 22 22 22 CYS CYS B . n B 2 23 ALA 23 23 23 ALA ALA B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 SER 25 25 25 SER SER B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 ARG 27 27 27 ARG ARG B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 PHE 29 29 29 PHE PHE B . n B 2 30 SER 30 30 30 SER SER B . n B 2 31 ALA 31 31 31 ALA ALA B . n B 2 32 TYR 32 32 32 TYR TYR B . n B 2 33 GLY 33 33 33 GLY GLY B . n B 2 34 MET 34 34 34 MET MET B . n B 2 35 ALA 35 35 35 ALA ALA B . n B 2 36 TRP 36 36 36 TRP TRP B . n B 2 37 TYR 37 37 37 TYR TYR B . n B 2 38 ARG 38 38 38 ARG ARG B . n B 2 39 GLN 39 39 39 GLN GLN B . n B 2 40 ALA 40 40 40 ALA ALA B . n B 2 41 PRO 41 41 41 PRO PRO B . n B 2 42 GLY 42 42 42 GLY GLY B . n B 2 43 LYS 43 43 43 LYS LYS B . n B 2 44 GLU 44 44 44 GLU GLU B . n B 2 45 ARG 45 45 45 ARG ARG B . n B 2 46 GLU 46 46 46 GLU GLU B . n B 2 47 TRP 47 47 47 TRP TRP B . n B 2 48 VAL 48 48 48 VAL VAL B . n B 2 49 ALA 49 49 49 ALA ALA B . n B 2 50 ALA 50 50 50 ALA ALA B . n B 2 51 ILE 51 51 51 ILE ILE B . n B 2 52 ARG 52 52 52 ARG ARG B . n B 2 53 TRP 53 53 53 TRP TRP B . n B 2 54 ILE 54 54 54 ILE ILE B . n B 2 55 GLY 55 55 55 GLY GLY B . n B 2 56 ASP 56 56 56 ASP ASP B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 THR 58 58 58 THR THR B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 TYR 60 60 60 TYR TYR B . n B 2 61 ALA 61 61 61 ALA ALA B . n B 2 62 ASP 62 62 62 ASP ASP B . n B 2 63 SER 63 63 63 SER SER B . n B 2 64 VAL 64 64 64 VAL VAL B . n B 2 65 LYS 65 65 65 LYS LYS B . n B 2 66 GLY 66 66 66 GLY GLY B . n B 2 67 ARG 67 67 67 ARG ARG B . n B 2 68 PHE 68 68 68 PHE PHE B . n B 2 69 THR 69 69 69 THR THR B . n B 2 70 ILE 70 70 70 ILE ILE B . n B 2 71 SER 71 71 71 SER SER B . n B 2 72 LYS 72 72 72 LYS LYS B . n B 2 73 ASP 73 73 73 ASP ASP B . n B 2 74 ASN 74 74 74 ASN ASN B . n B 2 75 ALA 75 75 75 ALA ALA B . n B 2 76 LYS 76 76 76 LYS LYS B . n B 2 77 ASN 77 77 77 ASN ASN B . n B 2 78 THR 78 78 78 THR THR B . n B 2 79 VAL 79 79 79 VAL VAL B . n B 2 80 TYR 80 80 80 TYR TYR B . n B 2 81 LEU 81 81 81 LEU LEU B . n B 2 82 GLN 82 82 82 GLN GLN B . n B 2 83 MET 83 83 83 MET MET B . n B 2 84 ASN 84 84 84 ASN ASN B . n B 2 85 SER 85 85 85 SER SER B . n B 2 86 LEU 86 86 86 LEU LEU B . n B 2 87 LYS 87 87 87 LYS LYS B . n B 2 88 PRO 88 88 88 PRO PRO B . n B 2 89 GLU 89 89 89 GLU GLU B . n B 2 90 ASP 90 90 90 ASP ASP B . n B 2 91 THR 91 91 91 THR THR B . n B 2 92 ALA 92 92 92 ALA ALA B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 TYR 95 95 95 TYR TYR B . n B 2 96 CYS 96 96 96 CYS CYS B . n B 2 97 ALA 97 97 97 ALA ALA B . n B 2 98 ALA 98 98 98 ALA ALA B . n B 2 99 LYS 99 99 99 LYS LYS B . n B 2 100 THR 100 100 100 THR THR B . n B 2 101 SER 101 101 101 SER SER B . n B 2 102 VAL 102 102 102 VAL VAL B . n B 2 103 THR 103 103 103 THR THR B . n B 2 104 SER 104 104 104 SER SER B . n B 2 105 TYR 105 105 105 TYR TYR B . n B 2 106 LEU 106 106 106 LEU LEU B . n B 2 107 SER 107 107 107 SER SER B . n B 2 108 GLU 108 108 108 GLU GLU B . n B 2 109 LYS 109 109 109 LYS LYS B . n B 2 110 SER 110 110 110 SER SER B . n B 2 111 TYR 111 111 111 TYR TYR B . n B 2 112 ASN 112 112 112 ASN ASN B . n B 2 113 TYR 113 113 113 TYR TYR B . n B 2 114 TRP 114 114 114 TRP TRP B . n B 2 115 GLY 115 115 115 GLY GLY B . n B 2 116 GLN 116 116 116 GLN GLN B . n B 2 117 GLY 117 117 117 GLY GLY B . n B 2 118 THR 118 118 118 THR THR B . n B 2 119 GLN 119 119 119 GLN GLN B . n B 2 120 VAL 120 120 120 VAL VAL B . n B 2 121 THR 121 121 121 THR THR B . n B 2 122 VAL 122 122 122 VAL VAL B . n B 2 123 SER 123 123 123 SER SER B . n B 2 124 SER 124 124 124 SER SER B . n B 2 125 LEU 125 125 ? ? ? B . n B 2 126 GLU 126 126 ? ? ? B . n B 2 127 HIS 127 127 ? ? ? B . n B 2 128 HIS 128 128 ? ? ? B . n B 2 129 HIS 129 129 ? ? ? B . n B 2 130 HIS 130 130 ? ? ? B . n B 2 131 HIS 131 131 ? ? ? B . n B 2 132 HIS 132 132 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 13 HOH HOH A . C 3 HOH 2 302 9 HOH HOH A . C 3 HOH 3 303 16 HOH HOH A . C 3 HOH 4 304 20 HOH HOH A . C 3 HOH 5 305 10 HOH HOH A . C 3 HOH 6 306 21 HOH HOH A . C 3 HOH 7 307 3 HOH HOH A . C 3 HOH 8 308 5 HOH HOH A . C 3 HOH 9 309 15 HOH HOH A . C 3 HOH 10 310 17 HOH HOH A . C 3 HOH 11 311 6 HOH HOH A . D 3 HOH 1 201 11 HOH HOH B . D 3 HOH 2 202 2 HOH HOH B . D 3 HOH 3 203 22 HOH HOH B . D 3 HOH 4 204 4 HOH HOH B . D 3 HOH 5 205 8 HOH HOH B . D 3 HOH 6 206 7 HOH HOH B . D 3 HOH 7 207 12 HOH HOH B . D 3 HOH 8 208 14 HOH HOH B . D 3 HOH 9 209 23 HOH HOH B . D 3 HOH 10 210 1 HOH HOH B . D 3 HOH 11 211 18 HOH HOH B . D 3 HOH 12 212 24 HOH HOH B . D 3 HOH 13 213 19 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLN 1 ? CG ? B GLN 1 CG 2 1 Y 1 B GLN 1 ? CD ? B GLN 1 CD 3 1 Y 1 B GLN 1 ? OE1 ? B GLN 1 OE1 4 1 Y 1 B GLN 1 ? NE2 ? B GLN 1 NE2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 10ND _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 10ND _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 10ND _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 10ND _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _struct.entry_id 10ND _struct.title 'Cryo-EM structure of human IL-10RA in complex with VHH E07' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 10ND _struct_keywords.text 'Complex, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP I10R1_HUMAN Q13651 ? 1 ;HGTELPSPPSVWFEAEFFHHILHWTPIPNQSESTCYEVALLRYGIESWNSISNCSQTLSYDLTAVTLDLYHSNGYRARVR AVDGSRHSNWTVTNTRFSVDEVTLTVGSVNLEIHNGFILGKIQLPRPKMAPANDTYESIFSHFREYEIAIRKVPGNFTFT HKKVKHENFSLLTSGEVGEFCVQVKPSVASRSNKGMWSKEECISLTRQYFTVTN ; 22 2 PDB 10ND 10ND ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 10ND A 1 ? 214 ? Q13651 22 ? 235 ? 22 235 2 2 10ND B 1 ? 132 ? 10ND 1 ? 132 ? 1 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 10ND GLY A 215 ? UNP Q13651 ? ? 'expression tag' 236 1 1 10ND GLY A 216 ? UNP Q13651 ? ? 'expression tag' 237 2 1 10ND GLY A 217 ? UNP Q13651 ? ? 'expression tag' 238 3 1 10ND GLY A 218 ? UNP Q13651 ? ? 'expression tag' 239 4 1 10ND SER A 219 ? UNP Q13651 ? ? 'expression tag' 240 5 1 10ND HIS A 220 ? UNP Q13651 ? ? 'expression tag' 241 6 1 10ND HIS A 221 ? UNP Q13651 ? ? 'expression tag' 242 7 1 10ND HIS A 222 ? UNP Q13651 ? ? 'expression tag' 243 8 1 10ND HIS A 223 ? UNP Q13651 ? ? 'expression tag' 244 9 1 10ND HIS A 224 ? UNP Q13651 ? ? 'expression tag' 245 10 1 10ND HIS A 225 ? UNP Q13651 ? ? 'expression tag' 246 11 1 10ND HIS A 226 ? UNP Q13651 ? ? 'expression tag' 247 12 1 10ND HIS A 227 ? UNP Q13651 ? ? 'expression tag' 248 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 63 ? SER A 72 ? THR A 84 SER A 93 5 ? 10 HELX_P HELX_P2 AA2 SER A 98 ? VAL A 102 ? SER A 119 VAL A 123 5 ? 5 HELX_P HELX_P3 AA3 THR A 135 ? PHE A 140 ? THR A 156 PHE A 161 1 ? 6 HELX_P HELX_P4 AA4 LYS B 87 ? THR B 91 ? LYS B 87 THR B 91 5 ? 5 HELX_P HELX_P5 AA5 SER B 107 ? LYS B 109 ? SER B 107 LYS B 109 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 181 SG ? ? ? 1_555 A CYS 202 SG ? ? A CYS 202 A CYS 223 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 22 B CYS 96 1_555 ? ? ? ? ? ? ? 2.027 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 181 ? CYS A 202 ? CYS A 202 ? 1_555 CYS A 223 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 22 ? CYS B 96 ? CYS B 22 ? 1_555 CYS B 96 ? 1_555 SG SG . . . None 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 153 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 174 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 154 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 175 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.77 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 3 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 6 ? AA8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 11 ? GLU A 16 ? VAL A 32 GLU A 37 AA1 2 HIS A 19 ? TRP A 24 ? HIS A 40 TRP A 45 AA1 3 SER A 59 ? ASP A 61 ? SER A 80 ASP A 82 AA2 1 TRP A 48 ? SER A 52 ? TRP A 69 SER A 73 AA2 2 THR A 34 ? ARG A 42 ? THR A 55 ARG A 63 AA2 3 TYR A 75 ? ASP A 83 ? TYR A 96 ASP A 104 AA2 4 ARG A 86 ? HIS A 87 ? ARG A 107 HIS A 108 AA3 1 TRP A 48 ? SER A 52 ? TRP A 69 SER A 73 AA3 2 THR A 34 ? ARG A 42 ? THR A 55 ARG A 63 AA3 3 TYR A 75 ? ASP A 83 ? TYR A 96 ASP A 104 AA3 4 THR A 91 ? VAL A 92 ? THR A 112 VAL A 113 AA4 1 SER A 108 ? HIS A 114 ? SER A 129 HIS A 135 AA4 2 PHE A 117 ? GLN A 123 ? PHE A 138 GLN A 144 AA4 3 ASN A 168 ? LEU A 172 ? ASN A 189 LEU A 193 AA5 1 LYS A 162 ? VAL A 164 ? LYS A 183 VAL A 185 AA5 2 ARG A 144 ? LYS A 152 ? ARG A 165 LYS A 173 AA5 3 GLU A 179 ? VAL A 188 ? GLU A 200 VAL A 209 AA5 4 GLU A 201 ? SER A 204 ? GLU A 222 SER A 225 AA6 1 LEU B 4 ? SER B 7 ? LEU B 4 SER B 7 AA6 2 LEU B 18 ? ALA B 24 ? LEU B 18 ALA B 24 AA6 3 THR B 78 ? MET B 83 ? THR B 78 MET B 83 AA6 4 PHE B 68 ? ASP B 73 ? PHE B 68 ASP B 73 AA7 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 AA7 2 THR B 118 ? SER B 123 ? THR B 118 SER B 123 AA7 3 ALA B 92 ? LYS B 99 ? ALA B 92 LYS B 99 AA7 4 GLY B 33 ? GLN B 39 ? GLY B 33 GLN B 39 AA7 5 GLU B 46 ? ARG B 52 ? GLU B 46 ARG B 52 AA7 6 THR B 58 ? TYR B 60 ? THR B 58 TYR B 60 AA8 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 AA8 2 THR B 118 ? SER B 123 ? THR B 118 SER B 123 AA8 3 ALA B 92 ? LYS B 99 ? ALA B 92 LYS B 99 AA8 4 TYR B 111 ? TRP B 114 ? TYR B 111 TRP B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 12 ? N TRP A 33 O HIS A 23 ? O HIS A 44 AA1 2 3 N LEU A 22 ? N LEU A 43 O TYR A 60 ? O TYR A 81 AA2 1 2 O ASN A 49 ? O ASN A 70 N LEU A 40 ? N LEU A 61 AA2 2 3 N CYS A 35 ? N CYS A 56 O VAL A 82 ? O VAL A 103 AA2 3 4 N ASP A 83 ? N ASP A 104 O ARG A 86 ? O ARG A 107 AA3 1 2 O ASN A 49 ? O ASN A 70 N LEU A 40 ? N LEU A 61 AA3 2 3 N CYS A 35 ? N CYS A 56 O VAL A 82 ? O VAL A 103 AA3 3 4 N VAL A 79 ? N VAL A 100 O THR A 91 ? O THR A 112 AA4 1 2 N GLU A 112 ? N GLU A 133 O LEU A 119 ? O LEU A 140 AA4 2 3 N GLY A 120 ? N GLY A 141 O PHE A 169 ? O PHE A 190 AA5 1 2 O LYS A 162 ? O LYS A 183 N ILE A 148 ? N ILE A 169 AA5 2 3 N ALA A 149 ? N ALA A 170 O GLN A 183 ? O GLN A 204 AA5 3 4 N PHE A 180 ? N PHE A 201 O ILE A 203 ? O ILE A 224 AA6 1 2 N SER B 7 ? N SER B 7 O SER B 21 ? O SER B 21 AA6 2 3 N LEU B 18 ? N LEU B 18 O MET B 83 ? O MET B 83 AA6 3 4 O GLN B 82 ? O GLN B 82 N THR B 69 ? N THR B 69 AA7 1 2 N VAL B 12 ? N VAL B 12 O THR B 121 ? O THR B 121 AA7 2 3 O THR B 118 ? O THR B 118 N TYR B 94 ? N TYR B 94 AA7 3 4 O TYR B 95 ? O TYR B 95 N TYR B 37 ? N TYR B 37 AA7 4 5 N ARG B 38 ? N ARG B 38 O GLU B 46 ? O GLU B 46 AA7 5 6 N ALA B 50 ? N ALA B 50 O TYR B 59 ? O TYR B 59 AA8 1 2 N VAL B 12 ? N VAL B 12 O THR B 121 ? O THR B 121 AA8 2 3 O THR B 118 ? O THR B 118 N TYR B 94 ? N TYR B 94 AA8 3 4 N ALA B 98 ? N ALA B 98 O TYR B 113 ? O TYR B 113 # _pdbx_entry_details.entry_id 10ND _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 77 ? ? -92.00 51.10 2 1 ASN A 136 ? ? 53.50 -130.76 3 1 PHE A 180 ? ? 73.20 -8.62 4 1 THR A 181 ? ? -100.63 64.09 5 1 VAL B 48 ? ? -108.97 -60.52 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 10ND _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 1y6k _em_3d_fitting_list.pdb_chain_id R _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id R _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 1y6k _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 10ND _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.40 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 458458 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Complex of human IL-10RA with VHH E07 and anti-VHH Fab' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1,2 # _em_imaging.entry_id 10ND _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 165000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 10ND _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 10ND _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 22 ? A HIS 1 2 1 Y 1 A GLY 23 ? A GLY 2 3 1 Y 1 A THR 24 ? A THR 3 4 1 Y 1 A ARG 228 ? A ARG 207 5 1 Y 1 A GLN 229 ? A GLN 208 6 1 Y 1 A TYR 230 ? A TYR 209 7 1 Y 1 A PHE 231 ? A PHE 210 8 1 Y 1 A THR 232 ? A THR 211 9 1 Y 1 A VAL 233 ? A VAL 212 10 1 Y 1 A THR 234 ? A THR 213 11 1 Y 1 A ASN 235 ? A ASN 214 12 1 Y 1 A GLY 236 ? A GLY 215 13 1 Y 1 A GLY 237 ? A GLY 216 14 1 Y 1 A GLY 238 ? A GLY 217 15 1 Y 1 A GLY 239 ? A GLY 218 16 1 Y 1 A SER 240 ? A SER 219 17 1 Y 1 A HIS 241 ? A HIS 220 18 1 Y 1 A HIS 242 ? A HIS 221 19 1 Y 1 A HIS 243 ? A HIS 222 20 1 Y 1 A HIS 244 ? A HIS 223 21 1 Y 1 A HIS 245 ? A HIS 224 22 1 Y 1 A HIS 246 ? A HIS 225 23 1 Y 1 A HIS 247 ? A HIS 226 24 1 Y 1 A HIS 248 ? A HIS 227 25 1 Y 1 B LEU 125 ? B LEU 125 26 1 Y 1 B GLU 126 ? B GLU 126 27 1 Y 1 B HIS 127 ? B HIS 127 28 1 Y 1 B HIS 128 ? B HIS 128 29 1 Y 1 B HIS 129 ? B HIS 129 30 1 Y 1 B HIS 130 ? B HIS 130 31 1 Y 1 B HIS 131 ? B HIS 131 32 1 Y 1 B HIS 132 ? B HIS 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _em_admin.current_status REL _em_admin.deposition_date 2026-01-28 _em_admin.deposition_site RCSB _em_admin.entry_id 10ND _em_admin.last_update 2026-10-21 _em_admin.map_release_date 2026-10-21 _em_admin.title 'Cryo-EM structure of human IL-10RA in complex with VHH E07' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.09 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? ? OTHER ? 8 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.21.2_5419 ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1y6k # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 10ND _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #