HEADER CELL ADHESION 30-JAN-26 10PA TITLE CRYSTAL STRUCTURE OF SDRD A2-A3 DOMAINS FROM STAPHYLOCOCCUS AUREUS JH1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE-ASPARTATE REPEAT-CONTAINING PROTEIN D; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: A2-A3 DOMAINS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS JH1; SOURCE 3 ORGANISM_TAXID: 359787; SOURCE 4 STRAIN: JH1; SOURCE 5 GENE: SDRD, SAV0562; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SDRD, MSCRAMM, LPXTG-MOTIF, STRUCTURAL GENOMICS, PSI-BIOLOGY, CENTER KEYWDS 2 FOR STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES, CSBID, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,P.R.GADE,M.ENDRES,A.JOCHIMIAK,CENTER FOR STRUCTURAL BIOLOGY OF AUTHOR 2 INFECTIOUS DISEASES (CSBID) REVDAT 1 11-FEB-26 10PA 0 JRNL AUTH K.TAN,P.R.GADE,M.ENDRES,A.JOCHIMIAK JRNL TITL CRYSTAL STRUCTURE OF SDRD A2-A3 DOMAINS FROM STAPHYLOCOCCUS JRNL TITL 2 AUREUS JH1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21.2_5419 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 39302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.270 REMARK 3 FREE R VALUE TEST SET COUNT : 2070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5700 - 4.7200 0.98 2653 156 0.1608 0.1650 REMARK 3 2 4.7200 - 3.7500 0.99 2535 139 0.1595 0.2169 REMARK 3 3 3.7500 - 3.2800 0.98 2501 141 0.2048 0.2502 REMARK 3 4 3.2700 - 2.9800 1.00 2506 155 0.2349 0.2634 REMARK 3 5 2.9800 - 2.7600 1.00 2533 133 0.2651 0.3039 REMARK 3 6 2.7600 - 2.6000 1.00 2528 116 0.2446 0.2575 REMARK 3 7 2.6000 - 2.4700 1.00 2523 138 0.2446 0.2819 REMARK 3 8 2.4700 - 2.3600 1.00 2492 145 0.2354 0.2771 REMARK 3 9 2.3600 - 2.2700 1.00 2484 138 0.2549 0.2673 REMARK 3 10 2.2700 - 2.1900 1.00 2528 133 0.2602 0.3296 REMARK 3 11 2.1900 - 2.1200 1.00 2507 140 0.2724 0.3024 REMARK 3 12 2.1200 - 2.0600 0.99 2450 141 0.2814 0.3059 REMARK 3 13 2.0600 - 2.0100 0.98 2435 140 0.2975 0.3386 REMARK 3 14 2.0100 - 1.9600 0.97 2379 134 0.3391 0.4122 REMARK 3 15 1.9600 - 1.9200 0.88 2178 121 0.3727 0.4664 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.272 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.057 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2511 REMARK 3 ANGLE : 0.838 3419 REMARK 3 CHIRALITY : 0.057 402 REMARK 3 PLANARITY : 0.005 444 REMARK 3 DIHEDRAL : 19.148 907 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0668 11.3274 20.5467 REMARK 3 T TENSOR REMARK 3 T11: 0.3913 T22: 0.5514 REMARK 3 T33: 0.3622 T12: 0.0325 REMARK 3 T13: -0.1084 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 2.6020 L22: 4.4286 REMARK 3 L33: 4.5947 L12: 0.3576 REMARK 3 L13: -1.9444 L23: -0.9482 REMARK 3 S TENSOR REMARK 3 S11: -0.1047 S12: 0.5407 S13: -0.1380 REMARK 3 S21: -0.2301 S22: 0.0694 S23: 0.5210 REMARK 3 S31: 0.1504 S32: -0.7773 S33: 0.0334 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5046 10.9296 25.4989 REMARK 3 T TENSOR REMARK 3 T11: 0.2723 T22: 0.3422 REMARK 3 T33: 0.2814 T12: 0.0474 REMARK 3 T13: -0.0380 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 2.2034 L22: 4.1512 REMARK 3 L33: 4.0138 L12: 0.3074 REMARK 3 L13: -1.7703 L23: -1.4080 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: 0.3128 S13: -0.1420 REMARK 3 S21: -0.2219 S22: -0.0391 S23: 0.3592 REMARK 3 S31: -0.0354 S32: -0.2314 S33: 0.0398 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 414 THROUGH 511 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7085 -4.3864 51.2459 REMARK 3 T TENSOR REMARK 3 T11: 0.8655 T22: 0.3413 REMARK 3 T33: 0.4998 T12: 0.0611 REMARK 3 T13: 0.3629 T23: 0.0527 REMARK 3 L TENSOR REMARK 3 L11: 2.2635 L22: 3.3454 REMARK 3 L33: 2.5104 L12: -1.6021 REMARK 3 L13: -0.8693 L23: -0.2298 REMARK 3 S TENSOR REMARK 3 S11: -0.3018 S12: -0.2073 S13: -0.0705 REMARK 3 S21: 1.5365 S22: 0.3288 S23: 0.5961 REMARK 3 S31: 0.1498 S32: -0.1762 S33: 0.1472 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 512 THROUGH 559 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1564 -8.9000 45.8073 REMARK 3 T TENSOR REMARK 3 T11: 0.6835 T22: 0.3091 REMARK 3 T33: 0.6121 T12: -0.0073 REMARK 3 T13: 0.3736 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 2.8398 L22: 2.5851 REMARK 3 L33: 2.3936 L12: -0.8034 REMARK 3 L13: -0.7840 L23: -1.0763 REMARK 3 S TENSOR REMARK 3 S11: -0.3986 S12: 0.2081 S13: -0.3301 REMARK 3 S21: 1.1455 S22: 0.2748 S23: 0.7822 REMARK 3 S31: 0.3420 S32: -0.2188 S33: 0.2638 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 10PA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-FEB-26. REMARK 100 THE DEPOSITION ID IS D_1000304776. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-25 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39344 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 36.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.84600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM CHLORIDE AND 20% (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.26150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.57400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.35250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.26150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.57400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 99.35250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.26150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 36.57400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 99.35250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.26150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 36.57400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.35250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 241 REMARK 465 ASN A 242 REMARK 465 ASN A 560 REMARK 465 GLN A 561 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 263 4.57 -68.47 REMARK 500 ASP A 400 -138.65 56.74 REMARK 500 HIS A 414 68.85 -112.52 REMARK 500 THR A 558 71.48 -111.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 261 OD1 REMARK 620 2 ASP A 263 OD1 81.4 REMARK 620 3 SER A 265 OG 93.3 80.0 REMARK 620 4 THR A 267 O 77.3 147.3 76.7 REMARK 620 5 ASP A 273 OD1 73.8 86.5 162.7 110.5 REMARK 620 6 ASP A 273 OD2 93.2 136.3 143.7 69.9 50.8 REMARK 620 7 HOH A 720 O 161.4 84.7 72.1 109.2 117.8 105.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 605 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 285 O REMARK 620 2 VAL A 287 O 88.2 REMARK 620 3 VAL A 346 O 170.1 99.1 REMARK 620 4 HOH A 709 O 94.5 149.1 75.8 REMARK 620 5 HOH A 739 O 110.9 79.2 77.3 127.5 REMARK 620 6 HOH A 761 O 88.3 78.0 86.7 71.4 149.5 REMARK 620 7 HOH A 775 O 74.4 135.1 104.3 74.7 69.6 140.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 606 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 299 O REMARK 620 2 ASP A 299 OD1 79.4 REMARK 620 3 ASP A 363 OD2 99.1 175.6 REMARK 620 4 ASP A 365 OD1 79.3 97.6 78.0 REMARK 620 5 ASP A 365 OD2 128.8 97.9 79.9 50.2 REMARK 620 6 HOH A 715 O 155.3 87.4 95.4 123.5 73.3 REMARK 620 7 HOH A 736 O 84.3 97.0 86.9 155.6 145.7 76.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 607 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 302 OE1 REMARK 620 2 ASP A 363 OD1 78.7 REMARK 620 3 ASP A 481 OD2 153.6 85.3 REMARK 620 4 HOH A 702 O 144.4 104.9 60.2 REMARK 620 5 HOH A 722 O 77.9 82.3 120.8 67.8 REMARK 620 6 HOH A 725 O 87.3 161.6 111.9 79.8 83.3 REMARK 620 7 HOH A 754 O 76.1 88.5 82.6 138.5 153.7 99.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 608 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 434 OD1 REMARK 620 2 ASP A 434 OD2 42.7 REMARK 620 3 GLU A 472 OE1 85.7 66.0 REMARK 620 4 THR A 514 O 78.1 99.7 163.6 REMARK 620 5 HOH A 744 O 115.0 72.4 65.9 119.1 REMARK 620 6 HOH A 777 O 62.5 93.7 73.5 100.7 139.2 REMARK 620 7 HOH A 784 O 126.0 161.5 102.0 89.7 116.7 68.8 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8VDK RELATED DB: PDB REMARK 900 N2N3B1 DOMAINS REMARK 900 RELATED ID: IDP98781 RELATED DB: TARGETTRACK DBREF 10PA A 244 561 UNP Q99W47 SDRD_STAAM 244 561 SEQADV 10PA SER A 241 UNP Q99W47 EXPRESSION TAG SEQADV 10PA ASN A 242 UNP Q99W47 EXPRESSION TAG SEQADV 10PA ALA A 243 UNP Q99W47 EXPRESSION TAG SEQRES 1 A 321 SER ASN ALA SER LYS ASN VAL ASN ASP LEU ILE THR SER SEQRES 2 A 321 ASN THR THR LEU THR VAL VAL ASP ALA ASP ASN SER LYS SEQRES 3 A 321 THR ILE VAL PRO ALA GLN ASP TYR LEU SER LEU LYS SER SEQRES 4 A 321 GLN ILE THR VAL ASP ASP LYS VAL LYS SER GLY ASP TYR SEQRES 5 A 321 PHE THR ILE LYS TYR SER ASP THR VAL GLN VAL TYR GLY SEQRES 6 A 321 LEU ASN PRO GLU ASP ILE LYS ASN ILE GLY ASP ILE LYS SEQRES 7 A 321 ASP PRO ASN ASN GLY GLU THR ILE ALA THR ALA LYS HIS SEQRES 8 A 321 ASP THR ALA ASN ASN LEU ILE THR TYR THR PHE THR ASP SEQRES 9 A 321 TYR VAL ASP ARG PHE ASN SER VAL LYS MET GLY ILE ASN SEQRES 10 A 321 TYR SER ILE TYR MET ASP ALA ASP THR ILE PRO VAL ASP SEQRES 11 A 321 LYS LYS ASP VAL PRO PHE SER VAL THR ILE GLY ASN GLN SEQRES 12 A 321 ILE THR THR THR THR ALA ASP ILE THR TYR PRO ALA TYR SEQRES 13 A 321 LYS GLU ALA ASP ASN ASN SER ILE GLY SER ALA PHE THR SEQRES 14 A 321 GLU THR VAL SER HIS VAL GLY ASN VAL GLU ASP PRO GLY SEQRES 15 A 321 TYR TYR ASN GLN VAL VAL TYR VAL ASN PRO MET ASP LYS SEQRES 16 A 321 ASP LEU LYS GLY ALA LYS LEU LYS VAL GLU ALA TYR HIS SEQRES 17 A 321 PRO LYS TYR PRO THR ASN ILE GLY GLN ILE ASN GLN ASN SEQRES 18 A 321 VAL THR ASN ILE LYS ILE TYR ARG VAL PRO GLU GLY TYR SEQRES 19 A 321 THR LEU ASN LYS GLY TYR ASP VAL ASN THR ASN ASP LEU SEQRES 20 A 321 VAL ASP VAL THR ASP GLU PHE LYS ASN LYS MET THR TYR SEQRES 21 A 321 GLY SER ASN GLN SER VAL ASN LEU ASP PHE GLY ASP ILE SEQRES 22 A 321 THR SER ALA TYR VAL VAL MET VAL ASN THR LYS PHE GLN SEQRES 23 A 321 TYR THR ASN SER GLU SER PRO THR LEU VAL GLN MET ALA SEQRES 24 A 321 THR LEU SER SER THR GLY ASN LYS SER VAL SER THR GLY SEQRES 25 A 321 ASN ALA LEU GLY PHE THR ASN ASN GLN HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET CA A 604 1 HET CA A 605 1 HET CA A 606 1 HET CA A 607 1 HET CA A 608 1 HET CL A 609 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 5 CA 5(CA 2+) FORMUL 10 CL CL 1- FORMUL 11 HOH *98(H2 O) HELIX 1 AA1 VAL A 247 ASP A 249 5 3 HELIX 2 AA2 ASN A 307 ILE A 314 5 8 HELIX 3 AA3 THR A 333 ASN A 335 5 3 HELIX 4 AA4 ASP A 344 PHE A 349 1 6 HELIX 5 AA5 ALA A 364 ILE A 367 5 4 HELIX 6 AA6 ASN A 483 LEU A 487 5 5 HELIX 7 AA7 THR A 491 LYS A 495 5 5 SHEET 1 AA1 4 ILE A 251 VAL A 260 0 SHEET 2 AA1 4 TYR A 274 VAL A 283 -1 O TYR A 274 N VAL A 260 SHEET 3 AA1 4 VAL A 352 MET A 362 -1 O MET A 354 N ILE A 281 SHEET 4 AA1 4 VAL A 301 GLN A 302 -1 N GLN A 302 O TYR A 361 SHEET 1 AA2 6 ILE A 317 LYS A 318 0 SHEET 2 AA2 6 THR A 325 ASP A 332 -1 O ILE A 326 N ILE A 317 SHEET 3 AA2 6 LEU A 337 PHE A 342 -1 O THR A 339 N LYS A 330 SHEET 4 AA2 6 TYR A 292 TYR A 297 -1 N PHE A 293 O TYR A 340 SHEET 5 AA2 6 LYS A 371 ILE A 380 -1 O THR A 379 N LYS A 296 SHEET 6 AA2 6 GLN A 383 ILE A 391 -1 O ALA A 389 N VAL A 374 SHEET 1 AA3 6 LYS A 397 ALA A 399 0 SHEET 2 AA3 6 ASN A 402 SER A 413 -1 O ASN A 402 N ALA A 399 SHEET 3 AA3 6 GLY A 422 VAL A 430 -1 O TYR A 423 N VAL A 412 SHEET 4 AA3 6 TYR A 517 LYS A 524 -1 O VAL A 521 N GLN A 426 SHEET 5 AA3 6 ASN A 464 ARG A 469 -1 N ASN A 464 O ASN A 522 SHEET 6 AA3 6 VAL A 488 ASP A 489 -1 O VAL A 488 N ARG A 469 SHEET 1 AA4 5 MET A 498 GLY A 501 0 SHEET 2 AA4 5 SER A 505 ILE A 513 -1 O ASN A 507 N THR A 499 SHEET 3 AA4 5 LEU A 437 GLU A 445 -1 N LEU A 442 O LEU A 508 SHEET 4 AA4 5 THR A 534 SER A 543 -1 O MET A 538 N GLU A 445 SHEET 5 AA4 5 ASN A 546 GLY A 556 -1 O THR A 551 N ALA A 539 LINK OD1 ASP A 261 CA CA A 604 1555 1555 2.52 LINK OD1 ASP A 263 CA CA A 604 1555 1555 2.40 LINK OG SER A 265 CA CA A 604 1555 1555 2.32 LINK O THR A 267 CA CA A 604 1555 1555 2.57 LINK OD1 ASP A 273 CA CA A 604 1555 1555 2.63 LINK OD2 ASP A 273 CA CA A 604 1555 1555 2.47 LINK O ASP A 285 CA CA A 605 1555 1555 2.38 LINK O VAL A 287 CA CA A 605 1555 1555 2.41 LINK O ASP A 299 CA CA A 606 1555 1555 2.31 LINK OD1 ASP A 299 CA CA A 606 1555 1555 2.34 LINK OE1 GLN A 302 CA CA A 607 1555 1555 2.37 LINK O VAL A 346 CA CA A 605 1555 1555 2.36 LINK OD2 ASP A 363 CA CA A 606 1555 1555 2.30 LINK OD1 ASP A 363 CA CA A 607 1555 1555 2.33 LINK OD1 ASP A 365 CA CA A 606 1555 1555 2.71 LINK OD2 ASP A 365 CA CA A 606 1555 1555 2.36 LINK OD1 ASP A 434 CA CA A 608 1555 1555 3.09 LINK OD2 ASP A 434 CA CA A 608 1555 1555 2.96 LINK OE1 GLU A 472 CA CA A 608 1555 1555 2.78 LINK OD2 ASP A 481 CA CA A 607 1555 1555 2.72 LINK O THR A 514 CA CA A 608 1555 1555 2.26 LINK CA CA A 604 O HOH A 720 1555 1555 2.67 LINK CA CA A 605 O HOH A 709 1555 1555 2.44 LINK CA CA A 605 O HOH A 739 1555 1555 2.13 LINK CA CA A 605 O HOH A 761 1555 1555 2.41 LINK CA CA A 605 O HOH A 775 1555 1555 2.65 LINK CA CA A 606 O HOH A 715 1555 1555 2.14 LINK CA CA A 606 O HOH A 736 1555 1555 2.40 LINK CA CA A 607 O HOH A 702 1555 2655 2.44 LINK CA CA A 607 O HOH A 722 1555 1555 2.67 LINK CA CA A 607 O HOH A 725 1555 2655 2.35 LINK CA CA A 607 O HOH A 754 1555 1555 2.29 LINK CA CA A 608 O HOH A 744 1555 1555 2.37 LINK CA CA A 608 O HOH A 777 1555 1555 2.83 LINK CA CA A 608 O HOH A 784 1555 1555 2.48 CRYST1 70.523 73.148 198.705 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014180 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005033 0.00000 CONECT 138 2472 CONECT 151 2472 CONECT 166 2472 CONECT 179 2472 CONECT 225 2472 CONECT 226 2472 CONECT 318 2473 CONECT 335 2473 CONECT 434 2474 CONECT 437 2474 CONECT 460 2475 CONECT 801 2473 CONECT 945 2475 CONECT 946 2474 CONECT 958 2474 CONECT 959 2474 CONECT 1487 2476 CONECT 1488 2476 CONECT 1796 2476 CONECT 1869 2475 CONECT 2124 2476 CONECT 2460 2461 2462 CONECT 2461 2460 CONECT 2462 2460 2463 CONECT 2463 2462 CONECT 2464 2465 2466 CONECT 2465 2464 CONECT 2466 2464 2467 CONECT 2467 2466 CONECT 2468 2469 2470 CONECT 2469 2468 CONECT 2470 2468 2471 CONECT 2471 2470 CONECT 2472 138 151 166 179 CONECT 2472 225 226 2497 CONECT 2473 318 335 801 2486 CONECT 2473 2516 2538 2552 CONECT 2474 434 437 946 958 CONECT 2474 959 2492 2513 CONECT 2475 460 945 1869 2499 CONECT 2475 2531 CONECT 2476 1487 1488 1796 2124 CONECT 2476 2521 2554 2561 CONECT 2486 2473 CONECT 2492 2474 CONECT 2497 2472 CONECT 2499 2475 CONECT 2513 2474 CONECT 2516 2473 CONECT 2521 2476 CONECT 2531 2475 CONECT 2538 2473 CONECT 2552 2473 CONECT 2554 2476 CONECT 2561 2476 MASTER 380 0 9 7 21 0 0 6 2574 1 55 25 END