data_117D
# 
_entry.id   117D 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.367 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   117D         pdb_0000117d 10.2210/pdb117d/pdb 
RCSB  ADL046       ?            ?                   
WWPDB D_1000170044 ?            ?                   
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        117D 
_pdbx_database_status.recvd_initial_deposition_date   1993-02-10 
_pdbx_database_status.deposit_site                    BNL 
_pdbx_database_status.process_site                    NDB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Bingman, C.A.'     1 ? 
'Jain, S.'          2 ? 
'Zon, G.'           3 ? 
'Sundaralingam, M.' 4 ? 
# 
loop_
_citation.id 
_citation.title 
_citation.journal_abbrev 
_citation.journal_volume 
_citation.page_first 
_citation.page_last 
_citation.year 
_citation.journal_id_ASTM 
_citation.country 
_citation.journal_id_ISSN 
_citation.journal_id_CSD 
_citation.book_publisher 
_citation.pdbx_database_id_PubMed 
_citation.pdbx_database_id_DOI 
primary 
;Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG).
;
'Nucleic Acids Res.' 20  6637 6647 1992 NARHAD UK 0305-1048 0389 ? 1480485 10.1093/nar/20.24.6637 
1       'Crystal and Molecular Structure of the A-DNA Dodecamer d(CCGTACGTACGG): Choice of Fragment Helical Axis' J.Mol.Biol. 227 
738  756  1992 JMOBAK UK 0022-2836 0070 ? ?       ?                      
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Bingman, C.A.'     1 ? 
primary 'Jain, S.'          2 ? 
primary 'Zon, G.'           3 ? 
primary 'Sundaralingam, M.' 4 ? 
1       'Bingman, C.A.'     5 ? 
1       'Zon, G.'           6 ? 
1       'Sundaralingam, M.' 7 ? 
# 
_cell.entry_id           117D 
_cell.length_a           46.200 
_cell.length_b           46.200 
_cell.length_c           71.500 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        120.00 
_cell.Z_PDB              12 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         117D 
_symmetry.space_group_name_H-M             'P 61 2 2' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                178 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn 
;DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')
;
3663.392 1  ? ? ? ? 
2 water   nat water                                                18.015   33 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DC)(DG)(DT)(DA)(DC)(DG)(DT)(DA)(DC)(DG)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GCGTACGTACGC 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG n 
1 2  DC n 
1 3  DG n 
1 4  DT n 
1 5  DA n 
1 6  DC n 
1 7  DG n 
1 8  DT n 
1 9  DA n 
1 10 DC n 
1 11 DG n 
1 12 DC n 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    117D 
_struct_ref.pdbx_db_accession          117D 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              117D 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 12 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             117D 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  12 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       12 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
# 
_exptl.entry_id          117D 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   ? 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      3.01 
_exptl_crystal.density_percent_sol   59.09 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION' 
_exptl_crystal_grow.temp            277.00 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6.50 
_exptl_crystal_grow.pdbx_details    'pH 6.50, VAPOR DIFFUSION, temperature 277.00K' 
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 WATER           ? ? ? 
1 2 1 SPERMINE        ? ? ? 
1 3 1 '[CO(NH3)6]3+'  ? ? ? 
1 4 1 'NA CACODYLATE' ? ? ? 
1 5 2 WATER           ? ? ? 
1 6 2 PROPANOL        ? ? ? 
# 
_diffrn.id                     1 
_diffrn.crystal_id             1 
_diffrn.ambient_temp           ? 
_diffrn.ambient_temp_details   ? 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'OSCILLATION CAMERA' 
_diffrn_detector.type                   ? 
_diffrn_detector.pdbx_collection_date   ? 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   ? 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             ? 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   . 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        'ELLIOTT GX-6' 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     117D 
_reflns.observed_criterion_sigma_I   2.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             ? 
_reflns.d_resolution_high            2.550 
_reflns.number_obs                   1115 
_reflns.number_all                   2008 
_reflns.percent_possible_obs         ? 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
_reflns.pdbx_CC_half                 ? 
_reflns.pdbx_CC_star                 ? 
_reflns.pdbx_Rpim_I_all              ? 
_reflns.pdbx_Rrim_I_all              ? 
# 
_refine.entry_id                                 117D 
_refine.ls_number_reflns_obs                     1089 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          2.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             8.000 
_refine.ls_d_res_high                            2.550 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_obs                          0.1420000 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.details                                  ? 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   243 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             33 
_refine_hist.number_atoms_total               276 
_refine_hist.d_res_high                       2.550 
_refine_hist.d_res_low                        8.000 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
n_bond_d               ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_angle_d              ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_planar_d             ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_hb_or_metal_coord    ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_it        2.400 3.000 ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_angle_it       3.300 4.500 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_it         3.100 3.000 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_angle_it        3.900 4.500 ? ? 'X-RAY DIFFRACTION' ? 
n_bond_angle_restr     ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_dihedral_angle_restr ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_impr_tor             ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_d         0.006 0.025 ? ? 'X-RAY DIFFRACTION' ? 
n_sugar_bond_angle_d   0.020 0.050 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_d          0.024 0.050 ? ? 'X-RAY DIFFRACTION' ? 
n_phos_bond_angle_d    0.045 0.075 ? ? 'X-RAY DIFFRACTION' ? 
n_plane_restr          0.015 0.040 ? ? 'X-RAY DIFFRACTION' ? 
n_chiral_restr         0.048 0.100 ? ? 'X-RAY DIFFRACTION' ? 
n_singtor_nbd          0.146 0.090 ? ? 'X-RAY DIFFRACTION' ? 
n_multtor_nbd          0.111 0.090 ? ? 'X-RAY DIFFRACTION' ? 
n_xhyhbond_nbd         ?     ?     ? ? 'X-RAY DIFFRACTION' ? 
# 
_struct.entry_id                  117D 
_struct.title                     
;CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        117D 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'A-DNA, DOUBLE HELIX, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DG 1  N1 ? ? ? 1_555 A DC 12 N3 ? ? A DG 1  A DC 12 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DG 1  N2 ? ? ? 1_555 A DC 12 O2 ? ? A DG 1  A DC 12 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DG 1  O6 ? ? ? 1_555 A DC 12 N4 ? ? A DG 1  A DC 12 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DC 2  N3 ? ? ? 1_555 A DG 11 N1 ? ? A DC 2  A DG 11 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DC 2  N4 ? ? ? 1_555 A DG 11 O6 ? ? A DC 2  A DG 11 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DC 2  O2 ? ? ? 1_555 A DG 11 N2 ? ? A DC 2  A DG 11 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DG 3  N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 3  A DC 10 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DG 3  N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 3  A DC 10 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DG 3  O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 3  A DC 10 12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DT 4  N3 ? ? ? 1_555 A DA 9  N1 ? ? A DT 4  A DA 9  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DT 4  O4 ? ? ? 1_555 A DA 9  N6 ? ? A DT 4  A DA 9  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DA 5  N1 ? ? ? 1_555 A DT 8  N3 ? ? A DA 5  A DT 8  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DA 5  N6 ? ? ? 1_555 A DT 8  O4 ? ? A DA 5  A DT 8  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DC 6  N3 ? ? ? 1_555 A DG 7  N1 ? ? A DC 6  A DG 7  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DC 6  N4 ? ? ? 1_555 A DG 7  O6 ? ? A DC 6  A DG 7  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DC 6  O2 ? ? ? 1_555 A DG 7  N2 ? ? A DC 6  A DG 7  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A DG 7  N1 ? ? ? 1_555 A DC 6  N3 ? ? A DG 7  A DC 6  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DG 7  N2 ? ? ? 1_555 A DC 6  O2 ? ? A DG 7  A DC 6  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DG 7  O6 ? ? ? 1_555 A DC 6  N4 ? ? A DG 7  A DC 6  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DT 8  N3 ? ? ? 1_555 A DA 5  N1 ? ? A DT 8  A DA 5  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DT 8  O4 ? ? ? 1_555 A DA 5  N6 ? ? A DT 8  A DA 5  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DA 9  N1 ? ? ? 1_555 A DT 4  N3 ? ? A DA 9  A DT 4  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DA 9  N6 ? ? ? 1_555 A DT 4  O4 ? ? A DA 9  A DT 4  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 3  N1 ? ? A DC 10 A DG 3  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 3  O6 ? ? A DC 10 A DG 3  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 3  N2 ? ? A DC 10 A DG 3  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DC 2  N3 ? ? A DG 11 A DC 2  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DC 2  O2 ? ? A DG 11 A DC 2  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog29 hydrog ? ? A DG 11 O6 ? ? ? 1_555 A DC 2  N4 ? ? A DG 11 A DC 2  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog30 hydrog ? ? A DC 12 N3 ? ? ? 1_555 A DG 1  N1 ? ? A DC 12 A DG 1  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog31 hydrog ? ? A DC 12 N4 ? ? ? 1_555 A DG 1  O6 ? ? A DC 12 A DG 1  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog32 hydrog ? ? A DC 12 O2 ? ? ? 1_555 A DG 1  N2 ? ? A DC 12 A DG 1  12_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
_database_PDB_matrix.entry_id          117D 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_atom_sites.entry_id                    117D 
_atom_sites.fract_transf_matrix[1][1]   0.021645 
_atom_sites.fract_transf_matrix[1][2]   0.012497 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.024994 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.013986 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG 1  1  1  DG G A . n 
A 1 2  DC 2  2  2  DC C A . n 
A 1 3  DG 3  3  3  DG G A . n 
A 1 4  DT 4  4  4  DT T A . n 
A 1 5  DA 5  5  5  DA A A . n 
A 1 6  DC 6  6  6  DC C A . n 
A 1 7  DG 7  7  7  DG G A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DA 9  9  9  DA A A . n 
A 1 10 DC 10 10 10 DC C A . n 
A 1 11 DG 11 11 11 DG G A . n 
A 1 12 DC 12 12 12 DC C A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 HOH 1  13 13 HOH HOH A . 
B 2 HOH 2  14 14 HOH HOH A . 
B 2 HOH 3  15 15 HOH HOH A . 
B 2 HOH 4  16 16 HOH HOH A . 
B 2 HOH 5  17 17 HOH HOH A . 
B 2 HOH 6  18 18 HOH HOH A . 
B 2 HOH 7  19 19 HOH HOH A . 
B 2 HOH 8  20 20 HOH HOH A . 
B 2 HOH 9  21 21 HOH HOH A . 
B 2 HOH 10 22 22 HOH HOH A . 
B 2 HOH 11 23 23 HOH HOH A . 
B 2 HOH 12 24 24 HOH HOH A . 
B 2 HOH 13 25 25 HOH HOH A . 
B 2 HOH 14 26 26 HOH HOH A . 
B 2 HOH 15 27 27 HOH HOH A . 
B 2 HOH 16 28 28 HOH HOH A . 
B 2 HOH 17 29 29 HOH HOH A . 
B 2 HOH 18 30 30 HOH HOH A . 
B 2 HOH 19 31 31 HOH HOH A . 
B 2 HOH 20 32 32 HOH HOH A . 
B 2 HOH 21 33 33 HOH HOH A . 
B 2 HOH 22 34 34 HOH HOH A . 
B 2 HOH 23 35 35 HOH HOH A . 
B 2 HOH 24 36 36 HOH HOH A . 
B 2 HOH 25 37 37 HOH HOH A . 
B 2 HOH 26 38 38 HOH HOH A . 
B 2 HOH 27 39 39 HOH HOH A . 
B 2 HOH 28 40 40 HOH HOH A . 
B 2 HOH 29 41 41 HOH HOH A . 
B 2 HOH 30 42 42 HOH HOH A . 
B 2 HOH 31 43 43 HOH HOH A . 
B 2 HOH 32 44 44 HOH HOH A . 
B 2 HOH 33 45 45 HOH HOH A . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555  x,y,z          1.0000000000 0.0000000000 0.0000000000 0.0000000000   0.0000000000 
1.0000000000  0.0000000000 0.0000000000  0.0000000000 0.0000000000 1.0000000000  0.0000000000  
2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5000000000 0.8660254038 0.0000000000 -23.1000000000 0.8660254038 
-0.5000000000 0.0000000000 40.0103736548 0.0000000000 0.0000000000 -1.0000000000 11.9166666667 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 1993-04-15 
2 'Structure model' 1 1 2008-05-22 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2023-03-22 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Database references'       
4 4 'Structure model' 'Structure summary'         
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' audit_author    
2 4 'Structure model' citation_author 
3 4 'Structure model' database_2      
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 4 'Structure model' '_audit_author.name'                  
2 4 'Structure model' '_citation_author.name'               
3 4 'Structure model' '_database_2.pdbx_DOI'                
4 4 'Structure model' '_database_2.pdbx_database_accession' 
# 
loop_
_refine_B_iso.class 
_refine_B_iso.details 
_refine_B_iso.treatment 
_refine_B_iso.pdbx_refine_id 
'ALL ATOMS'  TR isotropic 'X-RAY DIFFRACTION' 
'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' 
# 
loop_
_refine_occupancy.class 
_refine_occupancy.treatment 
_refine_occupancy.pdbx_refine_id 
'ALL ATOMS'  fix 'X-RAY DIFFRACTION' 
'ALL WATERS' fix 'X-RAY DIFFRACTION' 
# 
_software.name             NUCLSQ 
_software.classification   refinement 
_software.version          . 
_software.citation_id      ? 
_software.pdbx_ordinal     1 
_software.date             ? 
_software.type             ? 
_software.location         ? 
_software.language         ? 
# 
_pdbx_validate_symm_contact.id                1 
_pdbx_validate_symm_contact.PDB_model_num     1 
_pdbx_validate_symm_contact.auth_atom_id_1    "O3'" 
_pdbx_validate_symm_contact.auth_asym_id_1    A 
_pdbx_validate_symm_contact.auth_comp_id_1    DC 
_pdbx_validate_symm_contact.auth_seq_id_1     12 
_pdbx_validate_symm_contact.PDB_ins_code_1    ? 
_pdbx_validate_symm_contact.label_alt_id_1    ? 
_pdbx_validate_symm_contact.site_symmetry_1   1_555 
_pdbx_validate_symm_contact.auth_atom_id_2    O 
_pdbx_validate_symm_contact.auth_asym_id_2    A 
_pdbx_validate_symm_contact.auth_comp_id_2    HOH 
_pdbx_validate_symm_contact.auth_seq_id_2     23 
_pdbx_validate_symm_contact.PDB_ins_code_2    ? 
_pdbx_validate_symm_contact.label_alt_id_2    ? 
_pdbx_validate_symm_contact.site_symmetry_2   5_554 
_pdbx_validate_symm_contact.dist              2.17 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DG 1  ? ? "C1'" A DG 1  ? ? N9    A DG 1  ? ? 111.87 108.30 3.57   0.30 N 
2  1 "C3'" A DG 1  ? ? "O3'" A DG 1  ? ? P     A DC 2  ? ? 111.39 119.70 -8.31  1.20 Y 
3  1 P     A DC 2  ? ? "O5'" A DC 2  ? ? "C5'" A DC 2  ? ? 109.79 120.90 -11.11 1.60 N 
4  1 "O4'" A DC 2  ? ? "C1'" A DC 2  ? ? N1    A DC 2  ? ? 111.30 108.30 3.00   0.30 N 
5  1 "C3'" A DC 2  ? ? "O3'" A DC 2  ? ? P     A DG 3  ? ? 107.60 119.70 -12.10 1.20 Y 
6  1 "O5'" A DG 3  ? ? P     A DG 3  ? ? OP1   A DG 3  ? ? 122.83 110.70 12.13  1.20 N 
7  1 "O5'" A DG 3  ? ? "C5'" A DG 3  ? ? "C4'" A DG 3  ? ? 103.72 109.40 -5.68  0.80 N 
8  1 C5    A DG 3  ? ? C6    A DG 3  ? ? N1    A DG 3  ? ? 114.62 111.50 3.12   0.50 N 
9  1 C2    A DT 4  ? ? N3    A DT 4  ? ? C4    A DT 4  ? ? 123.53 127.20 -3.67  0.60 N 
10 1 "O4'" A DA 5  ? ? "C1'" A DA 5  ? ? N9    A DA 5  ? ? 112.56 108.30 4.26   0.30 N 
11 1 "O5'" A DC 6  ? ? "C5'" A DC 6  ? ? "C4'" A DC 6  ? ? 101.66 109.40 -7.74  0.80 N 
12 1 "O4'" A DC 6  ? ? "C1'" A DC 6  ? ? N1    A DC 6  ? ? 113.12 108.30 4.82   0.30 N 
13 1 "O5'" A DT 8  ? ? P     A DT 8  ? ? OP1   A DT 8  ? ? 118.77 110.70 8.07   1.20 N 
14 1 C2    A DT 8  ? ? N3    A DT 8  ? ? C4    A DT 8  ? ? 121.73 127.20 -5.47  0.60 N 
15 1 N3    A DT 8  ? ? C4    A DT 8  ? ? C5    A DT 8  ? ? 119.55 115.20 4.35   0.60 N 
16 1 N3    A DT 8  ? ? C4    A DT 8  ? ? O4    A DT 8  ? ? 115.42 119.90 -4.48  0.60 N 
17 1 C6    A DA 9  ? ? N1    A DA 9  ? ? C2    A DA 9  ? ? 123.48 118.60 4.88   0.60 N 
18 1 N1    A DA 9  ? ? C2    A DA 9  ? ? N3    A DA 9  ? ? 125.36 129.30 -3.94  0.50 N 
19 1 C5    A DA 9  ? ? C6    A DA 9  ? ? N1    A DA 9  ? ? 114.28 117.70 -3.42  0.50 N 
20 1 C5    A DG 11 ? ? C6    A DG 11 ? ? N1    A DG 11 ? ? 114.64 111.50 3.14   0.50 N 
21 1 "O5'" A DC 12 ? ? "C5'" A DC 12 ? ? "C4'" A DC 12 ? ? 103.91 109.40 -5.49  0.80 N 
22 1 "O4'" A DC 12 ? ? "C1'" A DC 12 ? ? N1    A DC 12 ? ? 113.03 108.30 4.73   0.30 N 
# 
_ndb_struct_conf_na.entry_id   117D 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG 1  1_555 A DC 12 12_565 -0.274 -0.085 -0.129 -12.290 -3.917  0.320  1  A_DG1:DC12_A A 1  ? A 12 ? 19 1 
1 A DC 2  1_555 A DG 11 12_565 0.071  -0.164 0.373  -4.831  -7.088  -3.669 2  A_DC2:DG11_A A 2  ? A 11 ? 19 1 
1 A DG 3  1_555 A DC 10 12_565 -0.040 -0.118 0.279  2.240   -9.199  -0.077 3  A_DG3:DC10_A A 3  ? A 10 ? 19 1 
1 A DT 4  1_555 A DA 9  12_565 -0.042 -0.189 0.139  0.674   -9.323  2.734  4  A_DT4:DA9_A  A 4  ? A 9  ? 20 1 
1 A DA 5  1_555 A DT 8  12_565 -0.088 -0.077 0.249  6.923   -11.609 -1.724 5  A_DA5:DT8_A  A 5  ? A 8  ? 20 1 
1 A DC 6  1_555 A DG 7  12_565 0.355  -0.190 -0.204 7.301   -13.981 -0.579 6  A_DC6:DG7_A  A 6  ? A 7  ? 19 1 
1 A DG 7  1_555 A DC 6  12_565 -0.355 -0.190 -0.204 -7.301  -13.981 -0.579 7  A_DG7:DC6_A  A 7  ? A 6  ? 19 1 
1 A DT 8  1_555 A DA 5  12_565 0.088  -0.077 0.249  -6.923  -11.609 -1.724 8  A_DT8:DA5_A  A 8  ? A 5  ? 20 1 
1 A DA 9  1_555 A DT 4  12_565 0.042  -0.189 0.139  -0.674  -9.323  2.735  9  A_DA9:DT4_A  A 9  ? A 4  ? 20 1 
1 A DC 10 1_555 A DG 3  12_565 0.040  -0.118 0.279  -2.240  -9.199  -0.077 10 A_DC10:DG3_A A 10 ? A 3  ? 19 1 
1 A DG 11 1_555 A DC 2  12_565 -0.071 -0.164 0.373  4.831   -7.088  -3.669 11 A_DG11:DC2_A A 11 ? A 2  ? 19 1 
1 A DC 12 1_555 A DG 1  12_565 0.274  -0.085 -0.129 12.290  -3.917  0.320  12 A_DC12:DG1_A A 12 ? A 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG 1  1_555 A DC 12 12_565 A DC 2  1_555 A DG 11 12_565 -0.216 -1.282 3.340 -3.342 5.223  28.654 -3.651 -0.287 3.068 10.399 
6.654  29.304 1  AA_DG1DC2:DG11DC12_AA A 1  ? A 12 ? A 2  ? A 11 ? 
1 A DC 2  1_555 A DG 11 12_565 A DG 3  1_555 A DC 10 12_565 0.470  -1.746 2.940 -0.349 2.321  34.621 -3.241 -0.836 2.815 3.895  
0.586  34.698 2  AA_DC2DG3:DC10DG11_AA A 2  ? A 11 ? A 3  ? A 10 ? 
1 A DG 3  1_555 A DC 10 12_565 A DT 4  1_555 A DA 9  12_565 -0.215 -1.595 3.424 2.732  1.327  29.820 -3.366 0.998  3.319 2.570  
-5.292 29.971 3  AA_DG3DT4:DA9DC10_AA  A 3  ? A 10 ? A 4  ? A 9  ? 
1 A DT 4  1_555 A DA 9  12_565 A DA 5  1_555 A DT 8  12_565 -0.180 -1.167 3.083 0.802  7.653  31.066 -3.365 0.458  2.721 14.020 
-1.469 31.982 4  AA_DT4DA5:DT8DA9_AA   A 4  ? A 9  ? A 5  ? A 8  ? 
1 A DA 5  1_555 A DT 8  12_565 A DC 6  1_555 A DG 7  12_565 0.262  -1.075 3.412 2.365  11.429 32.672 -3.554 -0.078 2.896 19.555 
-4.046 34.641 5  AA_DA5DC6:DG7DT8_AA   A 5  ? A 8  ? A 6  ? A 7  ? 
1 A DC 6  1_555 A DG 7  12_565 A DG 7  1_555 A DC 6  12_565 0.000  -2.140 3.541 0.000  24.327 27.902 -6.204 0.000  1.316 41.797 
0.000  36.858 6  AA_DC6DG7:DC6DG7_AA   A 6  ? A 7  ? A 7  ? A 6  ? 
1 A DG 7  1_555 A DC 6  12_565 A DT 8  1_555 A DA 5  12_565 -0.262 -1.075 3.412 -2.365 11.429 32.672 -3.554 0.078  2.896 19.555 
4.046  34.641 7  AA_DG7DT8:DA5DC6_AA   A 7  ? A 6  ? A 8  ? A 5  ? 
1 A DT 8  1_555 A DA 5  12_565 A DA 9  1_555 A DT 4  12_565 0.180  -1.167 3.083 -0.802 7.653  31.066 -3.365 -0.458 2.721 14.020 
1.469  31.982 8  AA_DT8DA9:DT4DA5_AA   A 8  ? A 5  ? A 9  ? A 4  ? 
1 A DA 9  1_555 A DT 4  12_565 A DC 10 1_555 A DG 3  12_565 0.215  -1.595 3.424 -2.732 1.327  29.820 -3.366 -0.998 3.319 2.570  
5.292  29.971 9  AA_DA9DC10:DG3DT4_AA  A 9  ? A 4  ? A 10 ? A 3  ? 
1 A DC 10 1_555 A DG 3  12_565 A DG 11 1_555 A DC 2  12_565 -0.470 -1.746 2.940 0.349  2.321  34.621 -3.241 0.836  2.815 3.895  
-0.586 34.698 10 AA_DC10DG11:DC2DG3_AA A 10 ? A 3  ? A 11 ? A 2  ? 
1 A DG 11 1_555 A DC 2  12_565 A DC 12 1_555 A DG 1  12_565 0.216  -1.282 3.340 3.342  5.223  28.654 -3.651 0.287  3.068 10.399 
-6.654 29.304 11 AA_DG11DC12:DG1DC2_AA A 11 ? A 2  ? A 12 ? A 1  ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
#