HEADER VIRAL PROTEIN 21-MAR-26 11ZW TITLE STRUCTURE OF THE PORCINE DELTACORONAVIRUS (PDCOV) RECEPTOR-BINDING TITLE 2 DOMAIN BOUND TO THE RBD MINIBINDER 11, THE PD3 FAB, AND THE KAPPA TITLE 3 LIGHT CHAIN NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PDCOV IL121_2014 RECEPTOR BINDING DOMAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 302-415; COMPND 5 SYNONYM: R-PTP-S,CHICK RECEPTOR TYROSINE PHOSPHATASE ALPHA,CRYP COMPND 6 ALPHA,CRYPALPHA; COMPND 7 EC: 3.1.3.48; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: RBD MINIBINDER 11; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PD3 FAB FRAGMENT HEAVY CHAIN; COMPND 15 CHAIN: H; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: PD3 FAB FRAGMENT LIGHT CHAIN; COMPND 19 CHAIN: L; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: KAPPA LIGHT CHAIN NANOBODY; COMPND 23 CHAIN: N; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORCINE DELTACORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 1586324; SOURCE 4 GENE: PTPRS; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_COMMON: MOUSE; SOURCE 16 ORGANISM_TAXID: 10090; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 22 ORGANISM_COMMON: MOUSE; SOURCE 23 ORGANISM_TAXID: 10090; SOURCE 24 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 25 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 27 MOL_ID: 5; SOURCE 28 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 29 ORGANISM_COMMON: LLAMA; SOURCE 30 ORGANISM_TAXID: 9844; SOURCE 31 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 32 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PORCINE DELTACORONAVIRUS, MINIBINDER, PROTEIN DESIGN, STRUCTURAL KEYWDS 2 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 3 SSGCID, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR N.G.AVERY,Y.J.PARK,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS AUTHOR 2 DISEASE (SSGCID),D.VEESLER REVDAT 1 13-MAY-26 11ZW 0 JRNL AUTH N.G.AVERY,C.N.YOSHIYAMA,A.L.TAYLOR,Y.J.PARK,D.ASARNOW, JRNL AUTH 2 L.PERRUZZA,J.T.BROWN,D.CORTI,F.BENIGNI,T.N.STARR,D.VEESLER JRNL TITL COMPUTATIONAL DESIGN OF AN ULTRAPOTENT DELTACORONAVIRUS JRNL TITL 2 MINIPROTEIN INHIBITOR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 123 56123 2026 JRNL REFN ESSN 1091-6490 JRNL PMID 42054371 JRNL DOI 10.1073/PNAS.2533456123 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : WARP, TOPAZ, PHENIX, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.800 REMARK 3 NUMBER OF PARTICLES : 512440 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 11ZW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAR-26. REMARK 100 THE DEPOSITION ID IS D_1000306329. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF THE PDCOV RBD, THE REMARK 245 RBD MINIBINDER 11, THE PD3 FAB, REMARK 245 AND THE KAPPA LIGHT CHAIN REMARK 245 NANOBODY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 10236 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5280.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, N, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 271 REMARK 465 GLY A 272 REMARK 465 ILE A 273 REMARK 465 LEU A 274 REMARK 465 PRO A 275 REMARK 465 SER A 276 REMARK 465 PRO A 277 REMARK 465 GLY A 278 REMARK 465 MET A 279 REMARK 465 PRO A 280 REMARK 465 ALA A 281 REMARK 465 LEU A 282 REMARK 465 LEU A 283 REMARK 465 SER A 284 REMARK 465 LEU A 285 REMARK 465 VAL A 286 REMARK 465 SER A 287 REMARK 465 LEU A 288 REMARK 465 LEU A 289 REMARK 465 SER A 290 REMARK 465 VAL A 291 REMARK 465 LEU A 292 REMARK 465 LEU A 293 REMARK 465 MET A 294 REMARK 465 GLY A 295 REMARK 465 CYS A 296 REMARK 465 VAL A 297 REMARK 465 ALA A 298 REMARK 465 GLU A 299 REMARK 465 THR A 300 REMARK 465 GLY A 301 REMARK 465 THR A 302 REMARK 465 PRO A 303 REMARK 465 GLU A 304 REMARK 465 GLY A 418 REMARK 465 SER A 419 REMARK 465 GLY A 420 REMARK 465 LEU A 421 REMARK 465 ASN A 422 REMARK 465 ASP A 423 REMARK 465 ILE A 424 REMARK 465 PHE A 425 REMARK 465 GLU A 426 REMARK 465 ALA A 427 REMARK 465 GLN A 428 REMARK 465 LYS A 429 REMARK 465 ILE A 430 REMARK 465 GLU A 431 REMARK 465 TRP A 432 REMARK 465 HIS A 433 REMARK 465 GLU A 434 REMARK 465 GLY A 435 REMARK 465 GLY A 436 REMARK 465 SER A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 HIS A 440 REMARK 465 HIS A 441 REMARK 465 HIS A 442 REMARK 465 HIS A 443 REMARK 465 HIS A 444 REMARK 465 HIS A 445 REMARK 465 MET B -38 REMARK 465 HIS B -37 REMARK 465 HIS B -36 REMARK 465 HIS B -35 REMARK 465 HIS B -34 REMARK 465 HIS B -33 REMARK 465 HIS B -32 REMARK 465 HIS B -31 REMARK 465 HIS B -30 REMARK 465 GLY B -29 REMARK 465 GLY B -28 REMARK 465 SER B -27 REMARK 465 LEU B -26 REMARK 465 VAL B -25 REMARK 465 PRO B -24 REMARK 465 ARG B -23 REMARK 465 GLY B -22 REMARK 465 SER B -21 REMARK 465 GLY B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 GLY B -17 REMARK 465 LEU B -16 REMARK 465 ASN B -15 REMARK 465 ASP B -14 REMARK 465 ILE B -13 REMARK 465 PHE B -12 REMARK 465 GLU B -11 REMARK 465 ALA B -10 REMARK 465 GLN B -9 REMARK 465 LYS B -8 REMARK 465 ILE B -7 REMARK 465 GLU B -6 REMARK 465 TRP B -5 REMARK 465 HIS B -4 REMARK 465 GLU B -3 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 HIS B 1 REMARK 465 MET B 2 REMARK 465 SER B 51 REMARK 465 LYS B 52 REMARK 465 ASP B 53 REMARK 465 PRO B 54 REMARK 465 GLU B 127 REMARK 465 ASP B 128 REMARK 465 TYR B 129 REMARK 465 GLU B 130 REMARK 465 LYS B 131 REMARK 465 ILE B 132 REMARK 465 TYR B 133 REMARK 465 GLU B 134 REMARK 465 ALA B 135 REMARK 465 GLU B 136 REMARK 465 LYS B 137 REMARK 465 MET H -23 REMARK 465 PRO H -22 REMARK 465 MET H -21 REMARK 465 GLY H -20 REMARK 465 SER H -19 REMARK 465 LEU H -18 REMARK 465 GLN H -17 REMARK 465 PRO H -16 REMARK 465 LEU H -15 REMARK 465 ALA H -14 REMARK 465 THR H -13 REMARK 465 LEU H -12 REMARK 465 TYR H -11 REMARK 465 LEU H -10 REMARK 465 LEU H -9 REMARK 465 GLY H -8 REMARK 465 MET H -7 REMARK 465 LEU H -6 REMARK 465 VAL H -5 REMARK 465 ALA H -4 REMARK 465 SER H -3 REMARK 465 VAL H -2 REMARK 465 LEU H -1 REMARK 465 ALA H 0 REMARK 465 SER H 135 REMARK 465 LYS H 136 REMARK 465 SER H 137 REMARK 465 THR H 138 REMARK 465 SER H 139 REMARK 465 GLY H 140 REMARK 465 GLY H 141 REMARK 465 SER H 222 REMARK 465 CYS H 223 REMARK 465 GLY H 224 REMARK 465 GLY H 225 REMARK 465 SER H 226 REMARK 465 GLY H 227 REMARK 465 GLY H 228 REMARK 465 SER H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 465 HIS H 232 REMARK 465 HIS H 233 REMARK 465 HIS H 234 REMARK 465 HIS H 235 REMARK 465 HIS H 236 REMARK 465 HIS H 237 REMARK 465 MET L -23 REMARK 465 PRO L -22 REMARK 465 MET L -21 REMARK 465 GLY L -20 REMARK 465 SER L -19 REMARK 465 LEU L -18 REMARK 465 GLN L -17 REMARK 465 PRO L -16 REMARK 465 LEU L -15 REMARK 465 ALA L -14 REMARK 465 THR L -13 REMARK 465 LEU L -12 REMARK 465 TYR L -11 REMARK 465 LEU L -10 REMARK 465 LEU L -9 REMARK 465 GLY L -8 REMARK 465 MET L -7 REMARK 465 LEU L -6 REMARK 465 VAL L -5 REMARK 465 ALA L -4 REMARK 465 SER L -3 REMARK 465 VAL L -2 REMARK 465 LEU L -1 REMARK 465 ALA L 0 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 MET N -24 REMARK 465 LYS N -23 REMARK 465 LYS N -22 REMARK 465 THR N -21 REMARK 465 ALA N -20 REMARK 465 ILE N -19 REMARK 465 ALA N -18 REMARK 465 ILE N -17 REMARK 465 ALA N -16 REMARK 465 VAL N -15 REMARK 465 ALA N -14 REMARK 465 LEU N -13 REMARK 465 ALA N -12 REMARK 465 GLY N -11 REMARK 465 PHE N -10 REMARK 465 ALA N -9 REMARK 465 THR N -8 REMARK 465 VAL N -7 REMARK 465 ALA N -6 REMARK 465 GLN N -5 REMARK 465 ALA N -4 REMARK 465 ALA N -3 REMARK 465 PRO N -2 REMARK 465 MET N -1 REMARK 465 GLY N 0 REMARK 465 SER N 1 REMARK 465 GLN N 2 REMARK 465 SER N 121 REMARK 465 SER N 122 REMARK 465 HIS N 123 REMARK 465 HIS N 124 REMARK 465 HIS N 125 REMARK 465 HIS N 126 REMARK 465 HIS N 127 REMARK 465 HIS N 128 REMARK 465 HIS N 129 REMARK 465 HIS N 130 REMARK 465 GLU N 131 REMARK 465 PRO N 132 REMARK 465 GLU N 133 REMARK 465 ALA N 134 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 337 OG1 CG2 REMARK 470 MET A 348 CG SD CE REMARK 470 SER A 366 OG REMARK 470 SER A 373 OG REMARK 470 ARG A 401 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 412 CG CD OE1 NE2 REMARK 470 LEU B 3 CG CD1 CD2 REMARK 470 THR B 4 OG1 CG2 REMARK 470 ARG B 5 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 VAL B 19 CG1 CG2 REMARK 470 ASP B 22 CG OD1 OD2 REMARK 470 SER B 23 OG REMARK 470 GLU B 25 CG CD OE1 OE2 REMARK 470 GLU B 26 CG CD OE1 OE2 REMARK 470 LEU B 28 CG CD1 CD2 REMARK 470 GLU B 29 CG CD OE1 OE2 REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 LYS B 34 CG CD CE NZ REMARK 470 ILE B 35 CG1 CG2 CD1 REMARK 470 SER B 36 OG REMARK 470 GLU B 37 CG CD OE1 OE2 REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 LEU B 49 CG CD1 CD2 REMARK 470 THR B 50 OG1 CG2 REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 SER B 57 OG REMARK 470 ASP B 68 CG OD1 OD2 REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 ASP B 79 CG OD1 OD2 REMARK 470 ARG B 80 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 82 CG1 CG2 CD1 REMARK 470 THR B 83 OG1 CG2 REMARK 470 SER B 84 OG REMARK 470 GLU B 85 CG CD OE1 OE2 REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 ASP B 87 CG OD1 OD2 REMARK 470 ASP B 104 CG OD1 OD2 REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 GLU B 112 CG CD OE1 OE2 REMARK 470 ASP B 122 CG OD1 OD2 REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 470 SER H 25 OG REMARK 470 SER H 56 OG REMARK 470 LYS H 76 CG CD CE NZ REMARK 470 SER H 78 OG REMARK 470 SER H 85 OG REMARK 470 SER H 100 OG REMARK 470 GLN H 112 CG CD OE1 NE2 REMARK 470 SER H 122 OG REMARK 470 THR H 123 OG1 CG2 REMARK 470 SER H 134 OG REMARK 470 THR H 142 OG1 CG2 REMARK 470 THR H 158 OG1 CG2 REMARK 470 THR H 167 OG1 CG2 REMARK 470 SER H 168 OG REMARK 470 SER H 179 OG REMARK 470 THR H 190 OG1 CG2 REMARK 470 SER H 193 OG REMARK 470 SER H 194 OG REMARK 470 SER H 195 OG REMARK 470 THR H 198 OG1 CG2 REMARK 470 THR H 200 OG1 CG2 REMARK 470 ASN H 211 CG OD1 ND2 REMARK 470 ASP L 1 CG OD1 OD2 REMARK 470 SER L 9 OG REMARK 470 SER L 14 OG REMARK 470 ASP L 17 CG OD1 OD2 REMARK 470 SER L 52 OG REMARK 470 SER L 60 OG REMARK 470 SER L 65 OG REMARK 470 THR L 69 OG1 CG2 REMARK 470 SER L 93 OG REMARK 470 SER L 114 OG REMARK 470 ASP L 122 CG OD1 OD2 REMARK 470 GLU L 123 CG CD OE1 OE2 REMARK 470 THR L 129 OG1 CG2 REMARK 470 SER L 156 OG REMARK 470 GLU L 165 CG CD OE1 OE2 REMARK 470 SER L 168 OG REMARK 470 LYS L 169 CG CD CE NZ REMARK 470 SER L 182 OG REMARK 470 ASP L 185 CG OD1 OD2 REMARK 470 SER L 208 OG REMARK 470 VAL N 3 CG1 CG2 REMARK 470 GLN N 4 CG CD OE1 NE2 REMARK 470 GLN N 14 CG CD OE1 NE2 REMARK 470 SER N 26 OG REMARK 470 LYS N 44 CG CD CE NZ REMARK 470 GLU N 45 CG CD OE1 OE2 REMARK 470 SER N 55 OG REMARK 470 ASP N 63 CG OD1 OD2 REMARK 470 THR N 70 OG1 CG2 REMARK 470 SER N 108 OG REMARK 470 THR N 119 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS N 97 CB CYS N 97 SG -0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 90 CB - CG - CD1 ANGL. DEV. = 12.2 DEGREES REMARK 500 LEU H 18 CA - CB - CG ANGL. DEV. = 21.8 DEGREES REMARK 500 CYS L 23 CA - CB - SG ANGL. DEV. = 8.8 DEGREES REMARK 500 LEU L 46 CB - CG - CD2 ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 394 -115.55 -104.72 REMARK 500 THR B 83 1.20 -69.06 REMARK 500 GLU B 110 49.37 -86.03 REMARK 500 THR H 167 -23.15 -145.84 REMARK 500 THR H 198 -32.57 -133.37 REMARK 500 SER L 30 -123.73 52.31 REMARK 500 SER L 60 5.06 -65.20 REMARK 500 PRO L 141 -178.39 -63.85 REMARK 500 ASN L 152 -0.23 63.13 REMARK 500 LYS L 190 -40.41 -130.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG H 19 0.08 SIDE CHAIN REMARK 500 ASP H 108 0.07 SIDE CHAIN REMARK 500 ARG L 61 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY H 169 14.26 REMARK 500 LYS L 42 -16.25 REMARK 500 SER L 127 11.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-76233 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE PORCINE DELTACORONAVIRUS (PDCOV) RECEPTOR-BINDING REMARK 900 DOMAIN BOUND TO THE RBD MINIBINDER 11, THE PD3 FAB, AND THE KAPPA REMARK 900 LIGHT CHAIN NANOBODY DBREF 11ZW A 271 302 UNP F1NWE3 PTPRS_CHICK 1 32 DBREF 11ZW A 303 416 UNP W8Q9Y7 W8Q9Y7_9NIDO 302 416 DBREF 11ZW B -38 137 PDB 11ZW 11ZW -38 137 DBREF 11ZW H -23 237 PDB 11ZW 11ZW -23 237 DBREF 11ZW L -23 214 PDB 11ZW 11ZW -23 214 DBREF 11ZW N -24 134 PDB 11ZW 11ZW -24 134 SEQADV 11ZW GLY A 272 UNP F1NWE3 ARG 2 CONFLICT SEQADV 11ZW THR A 300 UNP F1NWE3 SER 30 CONFLICT SEQADV 11ZW GLY A 301 UNP F1NWE3 PRO 31 CONFLICT SEQADV 11ZW THR A 302 UNP F1NWE3 PRO 32 CONFLICT SEQADV 11ZW GLY A 417 UNP W8Q9Y7 LINKER SEQADV 11ZW GLY A 418 UNP W8Q9Y7 LINKER SEQADV 11ZW SER A 419 UNP W8Q9Y7 LINKER SEQADV 11ZW GLY A 420 UNP W8Q9Y7 INSERTION SEQADV 11ZW LEU A 421 UNP W8Q9Y7 INSERTION SEQADV 11ZW ASN A 422 UNP W8Q9Y7 INSERTION SEQADV 11ZW ASP A 423 UNP W8Q9Y7 INSERTION SEQADV 11ZW ILE A 424 UNP W8Q9Y7 INSERTION SEQADV 11ZW PHE A 425 UNP W8Q9Y7 INSERTION SEQADV 11ZW GLU A 426 UNP W8Q9Y7 INSERTION SEQADV 11ZW ALA A 427 UNP W8Q9Y7 INSERTION SEQADV 11ZW GLN A 428 UNP W8Q9Y7 INSERTION SEQADV 11ZW LYS A 429 UNP W8Q9Y7 INSERTION SEQADV 11ZW ILE A 430 UNP W8Q9Y7 INSERTION SEQADV 11ZW GLU A 431 UNP W8Q9Y7 INSERTION SEQADV 11ZW TRP A 432 UNP W8Q9Y7 INSERTION SEQADV 11ZW HIS A 433 UNP W8Q9Y7 INSERTION SEQADV 11ZW GLU A 434 UNP W8Q9Y7 INSERTION SEQADV 11ZW GLY A 435 UNP W8Q9Y7 LINKER SEQADV 11ZW GLY A 436 UNP W8Q9Y7 LINKER SEQADV 11ZW SER A 437 UNP W8Q9Y7 LINKER SEQADV 11ZW HIS A 438 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 439 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 440 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 441 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 442 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 443 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 444 UNP W8Q9Y7 EXPRESSION TAG SEQADV 11ZW HIS A 445 UNP W8Q9Y7 EXPRESSION TAG SEQRES 1 A 175 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 A 175 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 A 175 VAL ALA GLU THR GLY THR PRO GLU LEU GLU VAL VAL GLN SEQRES 4 A 175 LEU ASN ILE SER ALA HIS MET ASP PHE GLY GLU ALA ARG SEQRES 5 A 175 LEU ASP SER VAL THR ILE ASN GLY ASN THR SER TYR CYS SEQRES 6 A 175 VAL THR LYS PRO TYR PHE ARG LEU GLU THR ASN PHE MET SEQRES 7 A 175 CYS THR GLY CYS THR MET ASN LEU ARG THR ASP THR CYS SEQRES 8 A 175 SER PHE ASP LEU SER ALA VAL ASN ASN GLY MET SER PHE SEQRES 9 A 175 SER GLN PHE CYS LEU SER THR GLU SER GLY ALA CYS GLU SEQRES 10 A 175 MET LYS ILE ILE VAL THR TYR VAL TRP ASN TYR LEU LEU SEQRES 11 A 175 ARG GLN ARG LEU TYR VAL THR ALA VAL GLU GLY GLN THR SEQRES 12 A 175 HIS THR GLY GLY GLY SER GLY LEU ASN ASP ILE PHE GLU SEQRES 13 A 175 ALA GLN LYS ILE GLU TRP HIS GLU GLY GLY SER HIS HIS SEQRES 14 A 175 HIS HIS HIS HIS HIS HIS SEQRES 1 B 176 MET HIS HIS HIS HIS HIS HIS HIS HIS GLY GLY SER LEU SEQRES 2 B 176 VAL PRO ARG GLY SER GLY GLY SER GLY LEU ASN ASP ILE SEQRES 3 B 176 PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU GLY GLY SER SEQRES 4 B 176 HIS MET LEU THR ARG GLU GLU VAL GLN ALA ILE ILE ASP SEQRES 5 B 176 GLY HIS VAL ILE GLU VAL LYS TYR ASP SER VAL GLU GLU SEQRES 6 B 176 PHE LEU GLU LYS TYR LYS GLY LYS ILE SER GLU GLU THR SEQRES 7 B 176 ILE GLU LEU ILE GLU LYS LEU ILE GLU LEU THR SER LYS SEQRES 8 B 176 ASP PRO LYS LEU SER ARG LEU PRO LEU ILE PHE MET GLN SEQRES 9 B 176 MET LEU ASP MET PHE ILE GLU ILE MET LYS ASP LEU LYS SEQRES 10 B 176 ASP ARG GLY ILE THR SER GLU GLU ASP ARG LYS LEU LEU SEQRES 11 B 176 TYR ASP VAL PHE LYS GLU ARG PHE GLU GLN TRP PHE ASP SEQRES 12 B 176 SER PHE TRP PRO GLY GLU GLU GLU ILE LYS GLU ILE MET SEQRES 13 B 176 LEU LYS ILE LEU ASP LEU LEU TYR ASN GLU ASP TYR GLU SEQRES 14 B 176 LYS ILE TYR GLU ALA GLU LYS SEQRES 1 H 261 MET PRO MET GLY SER LEU GLN PRO LEU ALA THR LEU TYR SEQRES 2 H 261 LEU LEU GLY MET LEU VAL ALA SER VAL LEU ALA GLU VAL SEQRES 3 H 261 GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN PRO GLY SEQRES 4 H 261 GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY PHE THR SEQRES 5 H 261 PHE ARG ASN TYR TRP MET ASN TRP VAL ARG GLN ALA PRO SEQRES 6 H 261 GLY LYS GLY LEU GLU TRP VAL ALA ASN ILE LYS GLN ASP SEQRES 7 H 261 GLY SER GLU LYS TYR TYR VAL ASP SER VAL LYS GLY ARG SEQRES 8 H 261 PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER PHE TYR SEQRES 9 H 261 LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA VAL SEQRES 10 H 261 TYR TYR CYS ALA ARG SER SER ILE THR ALA ARG ALA LEU SEQRES 11 H 261 PHE ASP CYS TRP GLY GLN GLY THR LEU VAL THR VAL SER SEQRES 12 H 261 SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA SEQRES 13 H 261 PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU SEQRES 14 H 261 GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR SEQRES 15 H 261 VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS SEQRES 16 H 261 THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER SEQRES 17 H 261 LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY SEQRES 18 H 261 THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER SEQRES 19 H 261 ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 20 H 261 GLY GLY SER GLY GLY SER HIS HIS HIS HIS HIS HIS HIS SEQRES 21 H 261 HIS SEQRES 1 L 238 MET PRO MET GLY SER LEU GLN PRO LEU ALA THR LEU TYR SEQRES 2 L 238 LEU LEU GLY MET LEU VAL ALA SER VAL LEU ALA ASP ILE SEQRES 3 L 238 GLN LEU THR GLN SER PRO SER PHE LEU SER ALA SER VAL SEQRES 4 L 238 GLY ASP ARG VAL THR ILE THR CYS ARG ALA THR GLN ASP SEQRES 5 L 238 ILE SER SER TYR LEU ALA TRP TYR GLN GLN LYS PRO GLY SEQRES 6 L 238 LYS ALA PRO LYS LEU LEU ILE PHE THR ALA SER THR LEU SEQRES 7 L 238 GLN THR GLY VAL PRO SER ARG PHE SER GLY SER GLY SER SEQRES 8 L 238 GLY THR GLU PHE THR LEU THR ILE SER SER LEU GLN PRO SEQRES 9 L 238 GLU ASP PHE ALA THR TYR TYR CYS GLN GLN LEU ASN SER SEQRES 10 L 238 TYR PRO TRP THR PHE GLY GLN GLY THR LYS VAL ASP ILE SEQRES 11 L 238 LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO SEQRES 12 L 238 PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL SEQRES 13 L 238 VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS SEQRES 14 L 238 VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SEQRES 15 L 238 SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SER SEQRES 16 L 238 THR TYR SER LEU SER SER THR LEU THR LEU SER LYS ALA SEQRES 17 L 238 ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR SEQRES 18 L 238 HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE ASN SEQRES 19 L 238 ARG GLY GLU CYS SEQRES 1 N 159 MET LYS LYS THR ALA ILE ALA ILE ALA VAL ALA LEU ALA SEQRES 2 N 159 GLY PHE ALA THR VAL ALA GLN ALA ALA PRO MET GLY SER SEQRES 3 N 159 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 4 N 159 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 5 N 159 ARG THR ILE SER ARG TYR ALA MET SER TRP PHE ARG GLN SEQRES 6 N 159 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA VAL ALA ARG SEQRES 7 N 159 ARG SER GLY ASP GLY ALA PHE TYR ALA ASP SER VAL GLN SEQRES 8 N 159 GLY ARG PHE THR VAL SER ARG ASP ASP ALA LYS ASN THR SEQRES 9 N 159 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 10 N 159 ALA VAL TYR TYR CYS ALA ILE ASP SER ASP THR PHE TYR SEQRES 11 N 159 SER GLY SER TYR ASP TYR TRP GLY GLN GLY THR GLN VAL SEQRES 12 N 159 THR VAL SER SER HIS HIS HIS HIS HIS HIS HIS HIS GLU SEQRES 13 N 159 PRO GLU ALA HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET NAG D 1 14 HET NAG D 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 6 NAG 4(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN 2(C6 H12 O6) FORMUL 8 HOH *216(H2 O) HELIX 1 AA1 ASP A 364 ASN A 369 1 6 HELIX 2 AA2 VAL B 8 GLY B 14 1 7 HELIX 3 AA3 SER B 23 TYR B 31 1 9 HELIX 4 AA4 SER B 36 THR B 50 1 15 HELIX 5 AA5 SER B 57 ARG B 80 1 24 HELIX 6 AA6 SER B 84 SER B 105 1 22 HELIX 7 AA7 GLU B 110 ASN B 126 1 17 HELIX 8 AA8 THR H 28 TYR H 32 5 5 HELIX 9 AA9 ARG H 87 THR H 91 5 5 HELIX 10 AB1 SER H 163 ALA H 165 5 3 HELIX 11 AB2 SER H 194 THR H 198 5 5 HELIX 12 AB3 LYS H 208 ASN H 211 5 4 HELIX 13 AB4 GLN L 79 PHE L 83 5 5 HELIX 14 AB5 SER L 121 SER L 127 1 7 HELIX 15 AB6 LYS L 183 GLU L 187 1 5 HELIX 16 AB7 THR N 29 TYR N 33 5 5 HELIX 17 AB8 LYS N 88 THR N 92 5 5 SHEET 1 AA1 6 ALA A 321 ILE A 328 0 SHEET 2 AA1 6 GLU A 306 MET A 316 -1 N HIS A 315 O ARG A 322 SHEET 3 AA1 6 TYR A 340 THR A 350 1 O MET A 348 N ILE A 312 SHEET 4 AA1 6 ASN A 397 GLY A 416 1 O THR A 415 N PHE A 341 SHEET 5 AA1 6 SER A 373 SER A 380 -1 N PHE A 374 O HIS A 414 SHEET 6 AA1 6 SER A 333 CYS A 335 -1 N TYR A 334 O LEU A 379 SHEET 1 AA2 6 ALA A 321 ILE A 328 0 SHEET 2 AA2 6 GLU A 306 MET A 316 -1 N HIS A 315 O ARG A 322 SHEET 3 AA2 6 TYR A 340 THR A 350 1 O MET A 348 N ILE A 312 SHEET 4 AA2 6 ASN A 397 GLY A 416 1 O THR A 415 N PHE A 341 SHEET 5 AA2 6 CYS A 386 THR A 393 -1 N MET A 388 O LEU A 404 SHEET 6 AA2 6 THR A 353 ARG A 357 -1 N ARG A 357 O LYS A 389 SHEET 1 AA3 4 GLN H 3 SER H 7 0 SHEET 2 AA3 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA3 4 SER H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA3 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AA4 6 GLY H 10 VAL H 12 0 SHEET 2 AA4 6 THR H 114 VAL H 118 1 O THR H 117 N GLY H 10 SHEET 3 AA4 6 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 AA4 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA4 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA4 6 LYS H 58 TYR H 60 -1 O TYR H 59 N ASN H 50 SHEET 1 AA5 4 GLY H 10 VAL H 12 0 SHEET 2 AA5 4 THR H 114 VAL H 118 1 O THR H 117 N GLY H 10 SHEET 3 AA5 4 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 AA5 4 PHE H 107 TRP H 110 -1 O CYS H 109 N ARG H 98 SHEET 1 AA6 4 SER H 127 LEU H 131 0 SHEET 2 AA6 4 ALA H 143 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 AA6 4 TYR H 183 VAL H 191 -1 O LEU H 185 N VAL H 149 SHEET 4 AA6 4 VAL H 170 THR H 172 -1 N HIS H 171 O VAL H 188 SHEET 1 AA7 4 SER H 127 LEU H 131 0 SHEET 2 AA7 4 ALA H 143 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 AA7 4 TYR H 183 VAL H 191 -1 O LEU H 185 N VAL H 149 SHEET 4 AA7 4 VAL H 176 LEU H 177 -1 N VAL H 176 O SER H 184 SHEET 1 AA8 3 THR H 158 TRP H 161 0 SHEET 2 AA8 3 ILE H 202 HIS H 207 -1 O ASN H 204 N SER H 160 SHEET 3 AA8 3 THR H 212 ARG H 217 -1 O VAL H 214 N VAL H 205 SHEET 1 AA9 4 LEU L 4 SER L 7 0 SHEET 2 AA9 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA9 4 GLU L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA9 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB1 5 PHE L 10 ALA L 13 0 SHEET 2 AB1 5 THR L 102 ILE L 106 1 O ASP L 105 N ALA L 13 SHEET 3 AB1 5 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB1 5 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AB1 5 LYS L 45 ILE L 48 -1 O LYS L 45 N GLN L 37 SHEET 1 AB2 4 SER L 114 PHE L 118 0 SHEET 2 AB2 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB2 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB2 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB3 4 ALA L 153 LEU L 154 0 SHEET 2 AB3 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB3 4 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 4 AB3 4 VAL L 205 ASN L 210 -1 O PHE L 209 N TYR L 192 SHEET 1 AB4 4 GLN N 4 SER N 8 0 SHEET 2 AB4 4 LEU N 19 SER N 26 -1 O SER N 26 N GLN N 4 SHEET 3 AB4 4 THR N 79 MET N 84 -1 O MET N 84 N LEU N 19 SHEET 4 AB4 4 PHE N 69 ASP N 74 -1 N SER N 72 O TYR N 81 SHEET 1 AB5 5 ALA N 59 TYR N 61 0 SHEET 2 AB5 5 ARG N 46 ALA N 52 -1 N VAL N 51 O PHE N 60 SHEET 3 AB5 5 ALA N 34 GLN N 40 -1 N TRP N 37 O ALA N 50 SHEET 4 AB5 5 ALA N 93 ASP N 100 -1 O TYR N 96 N PHE N 38 SHEET 5 AB5 5 TYR N 111 TRP N 112 -1 O TYR N 111 N ILE N 99 SHEET 1 AB6 5 ALA N 59 TYR N 61 0 SHEET 2 AB6 5 ARG N 46 ALA N 52 -1 N VAL N 51 O PHE N 60 SHEET 3 AB6 5 ALA N 34 GLN N 40 -1 N TRP N 37 O ALA N 50 SHEET 4 AB6 5 ALA N 93 ASP N 100 -1 O TYR N 96 N PHE N 38 SHEET 5 AB6 5 THR N 116 VAL N 118 -1 O VAL N 118 N ALA N 93 SSBOND 1 CYS A 335 CYS A 378 1555 1555 2.04 SSBOND 2 CYS A 349 CYS A 352 1555 1555 2.03 SSBOND 3 CYS A 361 CYS A 386 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 5 CYS H 147 CYS H 203 1555 1555 2.04 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 7 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 8 CYS N 23 CYS N 97 1555 1555 2.04 LINK ND2 ASN A 311 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN A 331 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.46 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.46 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.46 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 CISPEP 1 PHE H 153 PRO H 154 0 -15.52 CISPEP 2 GLU H 155 PRO H 156 0 -9.48 CISPEP 3 SER L 7 PRO L 8 0 -7.90 CISPEP 4 TYR L 94 PRO L 95 0 -0.15 CISPEP 5 TYR L 140 PRO L 141 0 -6.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 56 5817 CONECT 205 5878 CONECT 236 565 CONECT 352 369 CONECT 369 352 CONECT 439 616 CONECT 565 236 CONECT 616 439 CONECT 1895 2495 CONECT 2495 1895 CONECT 2790 3189 CONECT 3189 2790 CONECT 3494 3991 CONECT 3991 3494 CONECT 4332 4797 CONECT 4797 4332 CONECT 5067 5637 CONECT 5637 5067 CONECT 5817 56 5818 5828 CONECT 5818 5817 5819 5825 CONECT 5819 5818 5820 5826 CONECT 5820 5819 5821 5827 CONECT 5821 5820 5822 5828 CONECT 5822 5821 5829 CONECT 5823 5824 5825 5830 CONECT 5824 5823 CONECT 5825 5818 5823 CONECT 5826 5819 CONECT 5827 5820 5831 CONECT 5828 5817 5821 CONECT 5829 5822 CONECT 5830 5823 CONECT 5831 5827 5832 5842 CONECT 5832 5831 5833 5839 CONECT 5833 5832 5834 5840 CONECT 5834 5833 5835 5841 CONECT 5835 5834 5836 5842 CONECT 5836 5835 5843 CONECT 5837 5838 5839 5844 CONECT 5838 5837 CONECT 5839 5832 5837 CONECT 5840 5833 CONECT 5841 5834 5845 CONECT 5842 5831 5835 CONECT 5843 5836 CONECT 5844 5837 CONECT 5845 5841 5846 5854 CONECT 5846 5845 5847 5851 CONECT 5847 5846 5848 5852 CONECT 5848 5847 5849 5853 CONECT 5849 5848 5850 5854 CONECT 5850 5849 5855 CONECT 5851 5846 CONECT 5852 5847 5856 CONECT 5853 5848 CONECT 5854 5845 5849 CONECT 5855 5850 5867 CONECT 5856 5852 5857 5865 CONECT 5857 5856 5858 5862 CONECT 5858 5857 5859 5863 CONECT 5859 5858 5860 5864 CONECT 5860 5859 5861 5865 CONECT 5861 5860 5866 CONECT 5862 5857 CONECT 5863 5858 CONECT 5864 5859 CONECT 5865 5856 5860 CONECT 5866 5861 CONECT 5867 5855 5868 5876 CONECT 5868 5867 5869 5873 CONECT 5869 5868 5870 5874 CONECT 5870 5869 5871 5875 CONECT 5871 5870 5872 5876 CONECT 5872 5871 5877 CONECT 5873 5868 CONECT 5874 5869 CONECT 5875 5870 CONECT 5876 5867 5871 CONECT 5877 5872 CONECT 5878 205 5879 5889 CONECT 5879 5878 5880 5886 CONECT 5880 5879 5881 5887 CONECT 5881 5880 5882 5888 CONECT 5882 5881 5883 5889 CONECT 5883 5882 5890 CONECT 5884 5885 5886 5891 CONECT 5885 5884 CONECT 5886 5879 5884 CONECT 5887 5880 CONECT 5888 5881 5892 CONECT 5889 5878 5882 CONECT 5890 5883 CONECT 5891 5884 CONECT 5892 5888 5893 5903 CONECT 5893 5892 5894 5900 CONECT 5894 5893 5895 5901 CONECT 5895 5894 5896 5902 CONECT 5896 5895 5897 5903 CONECT 5897 5896 5904 CONECT 5898 5899 5900 5905 CONECT 5899 5898 CONECT 5900 5893 5898 CONECT 5901 5894 CONECT 5902 5895 CONECT 5903 5892 5896 CONECT 5904 5897 CONECT 5905 5898 MASTER 551 0 7 17 68 0 0 6 6116 5 107 81 END